BLASTX nr result
ID: Ephedra25_contig00024104
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00024104
(431 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006845688.1| hypothetical protein AMTR_s00019p00236380 [A... 65 7e-09
ref|XP_006290409.1| hypothetical protein CARUB_v10019081mg [Caps... 62 1e-07
ref|XP_006402489.1| hypothetical protein EUTSA_v10006474mg [Eutr... 61 1e-07
ref|XP_004489171.1| PREDICTED: pentatricopeptide repeat-containi... 60 4e-07
gb|EOY26249.1| Pentatricopeptide repeat-containing protein, puta... 59 5e-07
ref|NP_191695.1| pentatricopeptide repeat-containing protein [Ar... 59 5e-07
ref|XP_004308198.1| PREDICTED: pentatricopeptide repeat-containi... 59 9e-07
ref|XP_002878376.1| pentatricopeptide repeat-containing protein ... 59 9e-07
gb|EMJ21852.1| hypothetical protein PRUPE_ppa003671mg [Prunus pe... 58 1e-06
ref|XP_006485771.1| PREDICTED: pentatricopeptide repeat-containi... 58 2e-06
ref|XP_006440940.1| hypothetical protein CICLE_v10019823mg [Citr... 58 2e-06
ref|XP_003621136.1| Pentatricopeptide repeat-containing protein ... 57 2e-06
gb|ABN08951.1| Tetratricopeptide-like helical [Medicago truncatula] 57 2e-06
ref|XP_004143709.1| PREDICTED: pentatricopeptide repeat-containi... 56 4e-06
ref|XP_003553908.2| PREDICTED: pentatricopeptide repeat-containi... 55 7e-06
>ref|XP_006845688.1| hypothetical protein AMTR_s00019p00236380 [Amborella trichopoda]
gi|548848260|gb|ERN07363.1| hypothetical protein
AMTR_s00019p00236380 [Amborella trichopoda]
Length = 491
Score = 65.5 bits (158), Expect = 7e-09
Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Frame = -1
Query: 365 SEKTLTHS-SADINKICNIIKSHPYPKEPLDPTLNSLKPFSSPSCVEAVLKCLRKSKADA 189
S +LT S SADI IC +I +HP+P +PL P+L P S + VE VL L +
Sbjct: 14 SSPSLTPSPSADIESICTLINNHPFPLQPLQPSLQLYLPSLSTNFVEQVLGRLFLGHCNG 73
Query: 188 MKSLSFFNWAKKQNPQITNITTYEILLQNLLQLQSYDLAWQVLD 57
+K+ FF++A KQ + ++E ++ L +++ +D W +L+
Sbjct: 74 LKAFEFFDFATKQPNFHISSDSFEKIVHILSRMRDFDKVWDLLE 117
>ref|XP_006290409.1| hypothetical protein CARUB_v10019081mg [Capsella rubella]
gi|482559116|gb|EOA23307.1| hypothetical protein
CARUB_v10019081mg [Capsella rubella]
Length = 495
Score = 61.6 bits (148), Expect = 1e-07
Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 3/127 (2%)
Frame = -1
Query: 416 LQRLRPQIFRILA-VCYHSEKTLTHSSADINKICNIIKSHPYPKEPLDPTLNSLKPFSS- 243
L++ +R+LA V S + + + +I +I II HP+P P+ P L P SS
Sbjct: 2 LKKSSSDSYRLLAPVISSSLSSTSRNKTEIERITRIINDHPFPNHPIQPILAKHIPLSSL 61
Query: 242 -PSCVEAVLKCLRKSKADAMKSLSFFNWAKKQNPQITNITTYEILLQNLLQLQSYDLAWQ 66
P V VL L + ++ +K+L FF ++ K + ++E L L +++ +D AW
Sbjct: 62 SPEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSESSPTSDSFEKTLHILSRMRYFDQAWA 121
Query: 65 VLDEMQE 45
++ EM++
Sbjct: 122 LMAEMRK 128
>ref|XP_006402489.1| hypothetical protein EUTSA_v10006474mg [Eutrema salsugineum]
gi|557103588|gb|ESQ43942.1| hypothetical protein
EUTSA_v10006474mg [Eutrema salsugineum]
Length = 498
Score = 61.2 bits (147), Expect = 1e-07
Identities = 36/131 (27%), Positives = 68/131 (51%), Gaps = 7/131 (5%)
Frame = -1
Query: 416 LQRLRPQIFRILAVCYHSEKTLTHSSA-----DINKICNIIKSHPYPKEPLDPTLNSLKP 252
L++ +R+LA S +L+ +S+ +I ++ II HP+P P+ P L P
Sbjct: 2 LKKTSADSYRLLAPVLSSSSSLSSTSSSRNRTEIERVTRIINDHPFPNHPIQPILAKHIP 61
Query: 251 FSS--PSCVEAVLKCLRKSKADAMKSLSFFNWAKKQNPQITNITTYEILLQNLLQLQSYD 78
SS P V VL L + ++ +K+L FF ++ K + ++E L L +++ +D
Sbjct: 62 LSSLSPDFVSEVLGRLFAAHSNGLKALEFFKYSLKSSKSSPTSDSFEKTLHILSRMRYFD 121
Query: 77 LAWQVLDEMQE 45
AW ++ E+++
Sbjct: 122 QAWALMAEVRK 132
>ref|XP_004489171.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Cicer arietinum]
Length = 517
Score = 59.7 bits (143), Expect = 4e-07
Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
Frame = -1
Query: 356 TLTHSSADINKICNIIKSHPYPKEPLDPTLNSLKPFSSP---SCVEAVLKCLRKSKADAM 186
T ++ +I I II HP+P +PL PTL P S P S +E L L S ++ +
Sbjct: 35 TTQSNNTNIETITKIINDHPFPNKPLHPTLLHHLPPSKPISSSFIEKTLSALFSSHSNGL 94
Query: 185 KSLSFFNWAKKQNPQIT-NITTYEILLQNLLQLQSYDLAWQVLDEM 51
K+L FFN+ K T + ++ EI L L +++ +D AW +L ++
Sbjct: 95 KALEFFNFTIKYFHNTTPSHSSLEITLHILTRMRYFDKAWNLLQQI 140
>gb|EOY26249.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 512
Score = 59.3 bits (142), Expect = 5e-07
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Frame = -1
Query: 335 DINKICNIIKSHPYPKEPLDPTLNSLKP--FSSPSCVEAVLKCLRKSKADAMKSLSFFNW 162
+I +I II HP+P EPL PTL P S S VE+VL L + ++ +K+L FF +
Sbjct: 44 EIERITRIINDHPFPDEPLQPTLLQQIPRIALSVSFVESVLGRLFAAHSNGLKALEFFKY 103
Query: 161 AKKQNPQITNITTYEILLQNLLQLQSYDLAWQVLDEM 51
+ + ++ +E L L +++ +D AW+++ EM
Sbjct: 104 SVHYSQLTPSVDAFEKTLHILTRMRYFDKAWELMIEM 140
>ref|NP_191695.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75264589|sp|Q9M2C8.1|PP291_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g61360 gi|6850903|emb|CAB71066.1| putative protein
[Arabidopsis thaliana] gi|25054868|gb|AAN71923.1|
unknown protein [Arabidopsis thaliana]
gi|332646669|gb|AEE80190.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 498
Score = 59.3 bits (142), Expect = 5e-07
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 5/120 (4%)
Frame = -1
Query: 389 RILAVCYHSEKTLTHSS---ADINKICNIIKSHPYPKEPLDPTLNSLKPFSS--PSCVEA 225
R+LA S +L+ +S +I +I II HP+P P+ P L P SS P V
Sbjct: 12 RLLAPVLSSSSSLSSTSINRTEIERITIIINGHPFPNHPIQPILAKHIPLSSLSPEFVSE 71
Query: 224 VLKCLRKSKADAMKSLSFFNWAKKQNPQITNITTYEILLQNLLQLQSYDLAWQVLDEMQE 45
VL L + ++ +K+L FF ++ K + ++E L L +++ +D AW ++ E+++
Sbjct: 72 VLGRLFAAHSNGLKALEFFKYSLKSSKSSPTSDSFEKTLHILARMRYFDQAWALMAEVRK 131
>ref|XP_004308198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Fragaria vesca subsp. vesca]
Length = 499
Score = 58.5 bits (140), Expect = 9e-07
Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = -1
Query: 410 RLRPQIFRILAVCYHSEKTLTHSSADINKICNIIKSHPYPKEPLDPTL--NSLKPFSSPS 237
+LR + + + C S + DI++I II +HPYP +PL P L N S S
Sbjct: 20 KLRFSLVSLSSQCVSS----VEADIDIDRITKIINNHPYPDQPLQPALLQNIPPTLLSTS 75
Query: 236 CVEAVLKCLRKSKADAMKSLSFFNWAKKQNPQITNITTYEILLQNLLQLQSYDLAWQVL 60
VE VL L + ++ +K+L FFN++ + + +E L L +++ +D AW+++
Sbjct: 76 FVENVLGHLFGAHSNGLKALEFFNYSLHHSQLCPSSDAFEKTLHILTRMRYFDKAWELM 134
>ref|XP_002878376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297324214|gb|EFH54635.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 498
Score = 58.5 bits (140), Expect = 9e-07
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
Frame = -1
Query: 389 RILAVCYHSEKTLTHSS---ADINKICNIIKSHPYPKEPLDPTLNSLKPFSS--PSCVEA 225
R+LA S +L+ +S +I I II HP+P P+ P P SS P V
Sbjct: 12 RLLAPVLSSSSSLSSTSRNRTEIELITRIINDHPFPNHPIQPIFTKHIPLSSLSPEFVSE 71
Query: 224 VLKCLRKSKADAMKSLSFFNWAKKQNPQITNITTYEILLQNLLQLQSYDLAWQVLDEMQE 45
VL L + ++ +K+L FF ++ K + ++E L L +++ +D AW ++ E+++
Sbjct: 72 VLGSLFAAHSNGLKALEFFKYSLKSSNSSPTSDSFEKTLHILARMRYFDQAWALMAEIRK 131
>gb|EMJ21852.1| hypothetical protein PRUPE_ppa003671mg [Prunus persica]
Length = 557
Score = 58.2 bits (139), Expect = 1e-06
Identities = 31/102 (30%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Frame = -1
Query: 350 THSSADINKICNIIKSHPYPKEPLDPTL-NSLKPFS-SPSCVEAVLKCLRKSKADAMKSL 177
+ ++ ++++I II +HPYP +PL PTL + P + S S VE VL L + ++ +K+L
Sbjct: 35 SETNIEVDRITRIINNHPYPDQPLLPTLLQHIPPHALSTSFVENVLGYLFAAHSNGLKAL 94
Query: 176 SFFNWAKKQNPQITNITTYEILLQNLLQLQSYDLAWQVLDEM 51
FFN++ + + +E L L +++ +D AW +++++
Sbjct: 95 EFFNYSLHHSQLCPSSDAFEKTLHILARMRYFDKAWDLMEKI 136
>ref|XP_006485771.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Citrus sinensis]
Length = 499
Score = 57.8 bits (138), Expect = 2e-06
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 4/105 (3%)
Frame = -1
Query: 350 THSSADINKICNIIKSHPYPKEPLDPTLNSLKPFSSP---SCVEAVLKCLRKSKADAMKS 180
T S++I +I II HP+P +PL PTL P ++P + VE VL L + ++ +K+
Sbjct: 27 TTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKA 86
Query: 179 LSFFNWAKKQNPQIT-NITTYEILLQNLLQLQSYDLAWQVLDEMQ 48
L FF + Q+P T +E L L +++ +D AW+++ +Q
Sbjct: 87 LEFFKFT-LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ 130
>ref|XP_006440940.1| hypothetical protein CICLE_v10019823mg [Citrus clementina]
gi|557543202|gb|ESR54180.1| hypothetical protein
CICLE_v10019823mg [Citrus clementina]
Length = 500
Score = 57.8 bits (138), Expect = 2e-06
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 4/105 (3%)
Frame = -1
Query: 350 THSSADINKICNIIKSHPYPKEPLDPTLNSLKPFSSP---SCVEAVLKCLRKSKADAMKS 180
T S++I +I II HP+P +PL PTL P ++P + VE VL L + ++ +K+
Sbjct: 27 TTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKA 86
Query: 179 LSFFNWAKKQNPQIT-NITTYEILLQNLLQLQSYDLAWQVLDEMQ 48
L FF + Q+P T +E L L +++ +D AW+++ +Q
Sbjct: 87 LEFFKFT-LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ 130
>ref|XP_003621136.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496151|gb|AES77354.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 821
Score = 57.4 bits (137), Expect = 2e-06
Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Frame = -1
Query: 356 TLTHSSADINKICNIIKSHPYPKEPLDPTLNSLKPFSSP---SCVEAVLKCLRKSKADAM 186
T + + +I+ I II +HP+P++PL PTL P ++P S ++ +L L S ++ +
Sbjct: 30 TQSKNLPNIDTITTIINNHPFPQKPLHPTLLHYFPPTTPIPSSLIQNILIRLFASHSNGL 89
Query: 185 KSLSFFNWAKKQNPQITNITTYEILLQNLLQLQSYDLAWQVL 60
K+L FFN+ K ++ EI L L +++ +D AW +L
Sbjct: 90 KALEFFNFTIKNTHTNPCASSLEITLHILTRMRYFDKAWSLL 131
>gb|ABN08951.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 511
Score = 57.4 bits (137), Expect = 2e-06
Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Frame = -1
Query: 356 TLTHSSADINKICNIIKSHPYPKEPLDPTLNSLKPFSSP---SCVEAVLKCLRKSKADAM 186
T + + +I+ I II +HP+P++PL PTL P ++P S ++ +L L S ++ +
Sbjct: 30 TQSKNLPNIDTITTIINNHPFPQKPLHPTLLHYFPPTTPIPSSLIQNILIRLFASHSNGL 89
Query: 185 KSLSFFNWAKKQNPQITNITTYEILLQNLLQLQSYDLAWQVL 60
K+L FFN+ K ++ EI L L +++ +D AW +L
Sbjct: 90 KALEFFNFTIKNTHTNPCASSLEITLHILTRMRYFDKAWSLL 131
>ref|XP_004143709.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Cucumis sativus]
gi|449520004|ref|XP_004167024.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g61360-like [Cucumis sativus]
Length = 504
Score = 56.2 bits (134), Expect = 4e-06
Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Frame = -1
Query: 392 FRILAVCYHSE-KTLTHSSADINKICNIIKSHPYPKEPLDPTLNSLKPFSSPS--CVEAV 222
F ILA Y + + S+ +I +I II HP+P +PL PTL L P PS + V
Sbjct: 20 FLILAASYCTNLHPSSKSTTEIERIAKIINDHPFPDQPLHPTLLHLIPSPLPSNTFLNDV 79
Query: 221 LKCLRKSKADAMKSLSFFNWAKKQNPQITNITTYEILLQNLLQLQSYDLAWQVLDEMQE 45
L L + ++ +K+L FF + + +E L L +++ +D +W+++ E+++
Sbjct: 80 LGQLFAAHSNGLKALEFFKFCLHHSQAPPTSDAFEKTLHILSRMRYFDQSWELMREIRQ 138
>ref|XP_003553908.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Glycine max]
Length = 616
Score = 55.5 bits (132), Expect = 7e-06
Identities = 31/105 (29%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Frame = -1
Query: 359 KTLTHSSADINKICNIIKSHPYPKEPLDPTLNSLKPFS--SPSCVEAVLKCLRKSKADAM 186
++ + ++ D++ + I HP+P +PL PTL L P S S S VE +L L S ++ +
Sbjct: 108 ESCSQATVDVDTLTRTINDHPFPLQPLQPTLLHLLPPSTFSTSLVENILGRLFASHSNGL 167
Query: 185 KSLSFFNWAKKQNPQITNITTYEILLQNLLQLQSYDLAWQVLDEM 51
K+L FFN++ + + + + L L +++ +D AW +L ++
Sbjct: 168 KALEFFNYSLVHSHFPLSPASLNMTLHILTRMRYFDKAWVLLRDI 212