BLASTX nr result
ID: Ephedra25_contig00023990
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00023990
(714 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006853692.1| hypothetical protein AMTR_s00056p00136660 [A... 93 1e-16
emb|CBI36057.3| unnamed protein product [Vitis vinifera] 91 3e-16
ref|XP_006395217.1| hypothetical protein EUTSA_v10003552mg [Eutr... 90 6e-16
ref|XP_002515963.1| DNA repair/transcription protein met18/mms19... 90 6e-16
gb|EMJ18740.1| hypothetical protein PRUPE_ppa023072mg [Prunus pe... 89 1e-15
ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair ... 87 4e-15
ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair ... 87 4e-15
ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citr... 87 7e-15
ref|XP_004955617.1| PREDICTED: MMS19 nucleotide excision repair ... 87 7e-15
ref|XP_006343144.1| PREDICTED: MMS19 nucleotide excision repair ... 86 9e-15
gb|EXB74582.1| hypothetical protein L484_026279 [Morus notabilis] 86 1e-14
gb|EOY26932.1| MMS19 nucleotide excision repair protein, putativ... 86 2e-14
ref|XP_004302857.1| PREDICTED: uncharacterized protein LOC101304... 86 2e-14
ref|XP_006597169.1| PREDICTED: MMS19 nucleotide excision repair ... 85 3e-14
ref|XP_006597168.1| PREDICTED: MMS19 nucleotide excision repair ... 85 3e-14
ref|XP_006597167.1| PREDICTED: MMS19 nucleotide excision repair ... 85 3e-14
ref|XP_004486785.1| PREDICTED: uncharacterized protein LOC101495... 85 3e-14
ref|XP_006279933.1| hypothetical protein CARUB_v10025791mg [Caps... 85 3e-14
ref|XP_004155994.1| PREDICTED: MMS19 nucleotide excision repair ... 85 3e-14
ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair ... 85 3e-14
>ref|XP_006853692.1| hypothetical protein AMTR_s00056p00136660 [Amborella trichopoda]
gi|548857353|gb|ERN15159.1| hypothetical protein
AMTR_s00056p00136660 [Amborella trichopoda]
Length = 1160
Score = 92.8 bits (229), Expect = 1e-16
Identities = 41/74 (55%), Positives = 57/74 (77%)
Frame = -1
Query: 705 ISCLVAVISYPHSMMVRETALQCLGAMVAFPYASLFPLSKQVLTATTKAKDDSKRSVRKE 526
I CL +++YPH M+VRETA+QCL AM A P+A ++P+ QVL +KA DD KRSVR+E
Sbjct: 1083 IGCLSKLVTYPHLMIVRETAIQCLVAMAALPHARIYPMRLQVLETVSKALDDQKRSVRQE 1142
Query: 525 AVRCYNAWLAIASK 484
AVRC++ W ++AS+
Sbjct: 1143 AVRCHHVWASMASR 1156
>emb|CBI36057.3| unnamed protein product [Vitis vinifera]
Length = 1146
Score = 91.3 bits (225), Expect = 3e-16
Identities = 41/74 (55%), Positives = 55/74 (74%)
Frame = -1
Query: 705 ISCLVAVISYPHSMMVRETALQCLGAMVAFPYASLFPLSKQVLTATTKAKDDSKRSVRKE 526
I+CL+ ++ YPH M+VRETA+QCL AM P+A ++P+ QVL + KA DD KR+VR E
Sbjct: 1069 INCLIGLVGYPHMMVVRETAIQCLVAMSRLPHARIYPMRTQVLRSVQKALDDPKRAVRHE 1128
Query: 525 AVRCYNAWLAIASK 484
AVRC AW +IAS+
Sbjct: 1129 AVRCRQAWASIASR 1142
>ref|XP_006395217.1| hypothetical protein EUTSA_v10003552mg [Eutrema salsugineum]
gi|557091856|gb|ESQ32503.1| hypothetical protein
EUTSA_v10003552mg [Eutrema salsugineum]
Length = 1124
Score = 90.1 bits (222), Expect = 6e-16
Identities = 42/70 (60%), Positives = 52/70 (74%)
Frame = -1
Query: 705 ISCLVAVISYPHSMMVRETALQCLGAMVAFPYASLFPLSKQVLTATTKAKDDSKRSVRKE 526
I CLV + SYPH M+VRETA+QCL A++ P+ ++P +QVL A TKA DD KR VR+E
Sbjct: 1054 IECLVKLASYPHLMVVRETAIQCLVALLELPHGRIYPFRRQVLQAITKALDDPKRRVREE 1113
Query: 525 AVRCYNAWLA 496
AVRC AWLA
Sbjct: 1114 AVRCRQAWLA 1123
>ref|XP_002515963.1| DNA repair/transcription protein met18/mms19, putative [Ricinus
communis] gi|223544868|gb|EEF46383.1| DNA
repair/transcription protein met18/mms19, putative
[Ricinus communis]
Length = 1174
Score = 90.1 bits (222), Expect = 6e-16
Identities = 40/74 (54%), Positives = 56/74 (75%)
Frame = -1
Query: 705 ISCLVAVISYPHSMMVRETALQCLGAMVAFPYASLFPLSKQVLTATTKAKDDSKRSVRKE 526
I CL+ +++YPH M++RETA+QCL AM P+ ++P+ QVL A +KA DD KR+VR+E
Sbjct: 1097 IKCLIELVAYPHMMLIRETAVQCLVAMSELPHTRIYPVRIQVLQAISKALDDPKRAVRQE 1156
Query: 525 AVRCYNAWLAIASK 484
AVRC AW +IAS+
Sbjct: 1157 AVRCRQAWASIASR 1170
>gb|EMJ18740.1| hypothetical protein PRUPE_ppa023072mg [Prunus persica]
Length = 1158
Score = 89.0 bits (219), Expect = 1e-15
Identities = 42/71 (59%), Positives = 50/71 (70%)
Frame = -1
Query: 705 ISCLVAVISYPHSMMVRETALQCLGAMVAFPYASLFPLSKQVLTATTKAKDDSKRSVRKE 526
++CL +I YPH M VRETALQCL A PYA +FP+ QVL A KA DD KR+VR+E
Sbjct: 1088 VNCLTRLIDYPHMMFVRETALQCLIATSELPYARIFPMRTQVLQAICKALDDPKRAVRQE 1147
Query: 525 AVRCYNAWLAI 493
AVRC AWL +
Sbjct: 1148 AVRCRRAWLVL 1158
>ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X2 [Citrus sinensis]
Length = 1151
Score = 87.4 bits (215), Expect = 4e-15
Identities = 39/70 (55%), Positives = 54/70 (77%)
Frame = -1
Query: 693 VAVISYPHSMMVRETALQCLGAMVAFPYASLFPLSKQVLTATTKAKDDSKRSVRKEAVRC 514
+ +ISYPH M+VRETA+QCL AM P+A ++P+ +QVL A ++A DD KR+VR+EAVRC
Sbjct: 1078 IILISYPHMMLVRETAIQCLVAMSGLPHARIYPMRRQVLQAVSRALDDPKRAVRQEAVRC 1137
Query: 513 YNAWLAIASK 484
AW + AS+
Sbjct: 1138 RQAWASTASR 1147
>ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X1 [Citrus sinensis]
Length = 1155
Score = 87.4 bits (215), Expect = 4e-15
Identities = 39/70 (55%), Positives = 54/70 (77%)
Frame = -1
Query: 693 VAVISYPHSMMVRETALQCLGAMVAFPYASLFPLSKQVLTATTKAKDDSKRSVRKEAVRC 514
+ +ISYPH M+VRETA+QCL AM P+A ++P+ +QVL A ++A DD KR+VR+EAVRC
Sbjct: 1082 IILISYPHMMLVRETAIQCLVAMSGLPHARIYPMRRQVLQAVSRALDDPKRAVRQEAVRC 1141
Query: 513 YNAWLAIASK 484
AW + AS+
Sbjct: 1142 RQAWASTASR 1151
>ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citrus clementina]
gi|557528866|gb|ESR40116.1| hypothetical protein
CICLE_v10024743mg [Citrus clementina]
Length = 1155
Score = 86.7 bits (213), Expect = 7e-15
Identities = 39/74 (52%), Positives = 56/74 (75%)
Frame = -1
Query: 705 ISCLVAVISYPHSMMVRETALQCLGAMVAFPYASLFPLSKQVLTATTKAKDDSKRSVRKE 526
I ++ +ISYPH M+VRETA+QCL AM P+A ++P+ ++VL A ++A DD KR+VR+E
Sbjct: 1078 IDHIIKLISYPHMMLVRETAIQCLVAMSKLPHARIYPMRREVLQAISRALDDPKRAVRQE 1137
Query: 525 AVRCYNAWLAIASK 484
AVRC AW + AS+
Sbjct: 1138 AVRCRQAWASTASR 1151
>ref|XP_004955617.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Setaria
italica]
Length = 1129
Score = 86.7 bits (213), Expect = 7e-15
Identities = 40/73 (54%), Positives = 53/73 (72%)
Frame = -1
Query: 708 SISCLVAVISYPHSMMVRETALQCLGAMVAFPYASLFPLSKQVLTATTKAKDDSKRSVRK 529
+IS L ++SYPH M+VRETALQCL A FP++ +FP+ ++VL A KA DD KR+VR+
Sbjct: 1057 TISVLTQLVSYPHMMVVRETALQCLVAFSTFPHSKVFPMRRKVLQAAIKALDDKKRAVRQ 1116
Query: 528 EAVRCYNAWLAIA 490
EAVRC W + A
Sbjct: 1117 EAVRCRQTWQSFA 1129
>ref|XP_006343144.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Solanum
tuberosum]
Length = 1170
Score = 86.3 bits (212), Expect = 9e-15
Identities = 40/71 (56%), Positives = 54/71 (76%)
Frame = -1
Query: 696 LVAVISYPHSMMVRETALQCLGAMVAFPYASLFPLSKQVLTATTKAKDDSKRSVRKEAVR 517
L+ + SYP+ M++RETA+QCLGAM P+A ++P+ QVL A TKA DD KR+VR EAV+
Sbjct: 1096 LIELTSYPYVMVIRETAIQCLGAMSELPHARIYPMRTQVLQAITKALDDPKRAVRLEAVK 1155
Query: 516 CYNAWLAIASK 484
C AW +IAS+
Sbjct: 1156 CRLAWASIASR 1166
>gb|EXB74582.1| hypothetical protein L484_026279 [Morus notabilis]
Length = 1210
Score = 85.9 bits (211), Expect = 1e-14
Identities = 38/70 (54%), Positives = 52/70 (74%)
Frame = -1
Query: 711 SSISCLVAVISYPHSMMVRETALQCLGAMVAFPYASLFPLSKQVLTATTKAKDDSKRSVR 532
S I+CL+ +I+YPH M+VRET +QCL AM P+ ++P+ +VL A +KA DD KR+VR
Sbjct: 1105 SVINCLIGLIAYPHMMLVRETTIQCLVAMSKLPHTRIYPMRTKVLQAMSKALDDPKRAVR 1164
Query: 531 KEAVRCYNAW 502
+EAVRC AW
Sbjct: 1165 QEAVRCQQAW 1174
>gb|EOY26932.1| MMS19 nucleotide excision repair protein, putative isoform 1
[Theobroma cacao] gi|508779677|gb|EOY26933.1| MMS19
nucleotide excision repair protein, putative isoform 1
[Theobroma cacao]
Length = 1149
Score = 85.5 bits (210), Expect = 2e-14
Identities = 40/71 (56%), Positives = 52/71 (73%)
Frame = -1
Query: 696 LVAVISYPHSMMVRETALQCLGAMVAFPYASLFPLSKQVLTATTKAKDDSKRSVRKEAVR 517
L+ +I YPH M+VRETA+QCL A+ YA ++P+ QVL A KA DD KR+VR+EAVR
Sbjct: 1075 LIELIQYPHMMLVRETAIQCLVAISGLSYARVYPMRTQVLQAIAKALDDPKRAVRQEAVR 1134
Query: 516 CYNAWLAIASK 484
C AW +IAS+
Sbjct: 1135 CRQAWASIASR 1145
>ref|XP_004302857.1| PREDICTED: uncharacterized protein LOC101304108 [Fragaria vesca
subsp. vesca]
Length = 1149
Score = 85.5 bits (210), Expect = 2e-14
Identities = 41/72 (56%), Positives = 51/72 (70%)
Frame = -1
Query: 705 ISCLVAVISYPHSMMVRETALQCLGAMVAFPYASLFPLSKQVLTATTKAKDDSKRSVRKE 526
I CL +++YPH M+VRETA+QCL AM P +FPL QVL A KA DD KR+VR+E
Sbjct: 1078 IDCLSRLVAYPHMMLVRETAIQCLLAMSELPRPRIFPLKSQVLQAIFKALDDPKRAVREE 1137
Query: 525 AVRCYNAWLAIA 490
AVRC +AW + A
Sbjct: 1138 AVRCRHAWTSTA 1149
>ref|XP_006597169.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X4 [Glycine max]
Length = 1095
Score = 84.7 bits (208), Expect = 3e-14
Identities = 36/71 (50%), Positives = 52/71 (73%)
Frame = -1
Query: 705 ISCLVAVISYPHSMMVRETALQCLGAMVAFPYASLFPLSKQVLTATTKAKDDSKRSVRKE 526
I+CL+ ++ YPH M+VRETA+QCL A+ P+A ++P+ QVL A +K DDSKR+VR E
Sbjct: 1025 INCLIKLVGYPHKMLVRETAIQCLVALSELPHARIYPMRTQVLRAISKCLDDSKRAVRHE 1084
Query: 525 AVRCYNAWLAI 493
AV+C W ++
Sbjct: 1085 AVKCRQTWASM 1095
>ref|XP_006597168.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X3 [Glycine max]
Length = 1102
Score = 84.7 bits (208), Expect = 3e-14
Identities = 36/71 (50%), Positives = 52/71 (73%)
Frame = -1
Query: 705 ISCLVAVISYPHSMMVRETALQCLGAMVAFPYASLFPLSKQVLTATTKAKDDSKRSVRKE 526
I+CL+ ++ YPH M+VRETA+QCL A+ P+A ++P+ QVL A +K DDSKR+VR E
Sbjct: 1032 INCLIKLVGYPHKMLVRETAIQCLVALSELPHARIYPMRTQVLRAISKCLDDSKRAVRHE 1091
Query: 525 AVRCYNAWLAI 493
AV+C W ++
Sbjct: 1092 AVKCRQTWASM 1102
>ref|XP_006597167.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X2 [Glycine max]
Length = 1133
Score = 84.7 bits (208), Expect = 3e-14
Identities = 36/71 (50%), Positives = 52/71 (73%)
Frame = -1
Query: 705 ISCLVAVISYPHSMMVRETALQCLGAMVAFPYASLFPLSKQVLTATTKAKDDSKRSVRKE 526
I+CL+ ++ YPH M+VRETA+QCL A+ P+A ++P+ QVL A +K DDSKR+VR E
Sbjct: 1063 INCLIKLVGYPHKMLVRETAIQCLVALSELPHARIYPMRTQVLRAISKCLDDSKRAVRHE 1122
Query: 525 AVRCYNAWLAI 493
AV+C W ++
Sbjct: 1123 AVKCRQTWASM 1133
>ref|XP_004486785.1| PREDICTED: uncharacterized protein LOC101495813 [Cicer arietinum]
Length = 1138
Score = 84.7 bits (208), Expect = 3e-14
Identities = 38/73 (52%), Positives = 52/73 (71%)
Frame = -1
Query: 705 ISCLVAVISYPHSMMVRETALQCLGAMVAFPYASLFPLSKQVLTATTKAKDDSKRSVRKE 526
I+CL+ ++ YP +VRETA+QCL A+ P+A ++PL QVL A K DD+KRSVR+E
Sbjct: 1060 INCLIKLVDYPQKTLVRETAIQCLVALSMLPHARIYPLRTQVLRAIPKCLDDTKRSVRRE 1119
Query: 525 AVRCYNAWLAIAS 487
AV+C AW +I S
Sbjct: 1120 AVKCRQAWASITS 1132
>ref|XP_006279933.1| hypothetical protein CARUB_v10025791mg [Capsella rubella]
gi|482548637|gb|EOA12831.1| hypothetical protein
CARUB_v10025791mg [Capsella rubella]
Length = 1046
Score = 84.7 bits (208), Expect = 3e-14
Identities = 37/73 (50%), Positives = 51/73 (69%)
Frame = -1
Query: 705 ISCLVAVISYPHSMMVRETALQCLGAMVAFPYASLFPLSKQVLTATTKAKDDSKRSVRKE 526
I CLV + SYPH ++VRETA+QCL ++ P+ ++P +QVL A K+ DD KR VR+E
Sbjct: 969 IECLVKLTSYPHLLVVRETAIQCLATLLELPHRRIYPFRRQVLKAIAKSLDDPKRRVREE 1028
Query: 525 AVRCYNAWLAIAS 487
A+RC AW +I S
Sbjct: 1029 AIRCKQAWASITS 1041
>ref|XP_004155994.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Cucumis
sativus]
Length = 914
Score = 84.7 bits (208), Expect = 3e-14
Identities = 38/74 (51%), Positives = 53/74 (71%)
Frame = -1
Query: 705 ISCLVAVISYPHSMMVRETALQCLGAMVAFPYASLFPLSKQVLTATTKAKDDSKRSVRKE 526
+ CL + + H M+VRETA+QCL A+ P+A ++P+ +QVL +KA DD KRSVR+E
Sbjct: 837 VDCLAGLTDFSHMMLVRETAIQCLVAVSELPHARIYPMRRQVLHVISKALDDPKRSVRQE 896
Query: 525 AVRCYNAWLAIASK 484
AVRC AW +IAS+
Sbjct: 897 AVRCRQAWASIASR 910
>ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Cucumis
sativus]
Length = 1147
Score = 84.7 bits (208), Expect = 3e-14
Identities = 38/74 (51%), Positives = 53/74 (71%)
Frame = -1
Query: 705 ISCLVAVISYPHSMMVRETALQCLGAMVAFPYASLFPLSKQVLTATTKAKDDSKRSVRKE 526
+ CL + + H M+VRETA+QCL A+ P+A ++P+ +QVL +KA DD KRSVR+E
Sbjct: 1070 VDCLAGLTDFSHMMLVRETAIQCLVAVSELPHARIYPMRRQVLHVISKALDDPKRSVRQE 1129
Query: 525 AVRCYNAWLAIASK 484
AVRC AW +IAS+
Sbjct: 1130 AVRCRQAWASIASR 1143