BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00023902
         (892 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006493918.1| PREDICTED: putative pentatricopeptide repeat...   307   3e-81
ref|XP_006349560.1| PREDICTED: putative pentatricopeptide repeat...   305   1e-80
ref|XP_004234835.1| PREDICTED: putative pentatricopeptide repeat...   304   3e-80
ref|XP_002322703.2| hypothetical protein POPTR_0016s05390g [Popu...   304   3e-80
ref|XP_006421438.1| hypothetical protein CICLE_v10005013mg [Citr...   299   8e-79
gb|EXB53136.1| hypothetical protein L484_006956 [Morus notabilis]     298   2e-78
gb|EMJ05752.1| hypothetical protein PRUPE_ppa016618mg, partial [...   297   4e-78
gb|EOY09326.1| Mitochondrial RNAediting factor 1 [Theobroma cacao]    295   1e-77
gb|ABR17838.1| unknown [Picea sitchensis]                             292   1e-76
ref|XP_006280222.1| hypothetical protein CARUB_v10026131mg [Caps...   291   2e-76
ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat...   291   2e-76
ref|XP_006654247.1| PREDICTED: pentatricopeptide repeat-containi...   291   3e-76
ref|XP_002308737.1| pentatricopeptide repeat-containing family p...   291   3e-76
ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group] g...   290   4e-76
emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]         290   4e-76
ref|NP_200075.1| pentatricopeptide repeat protein MEF1 [Arabidop...   290   5e-76
ref|XP_002864185.1| pentatricopeptide repeat-containing protein ...   289   8e-76
gb|EMJ28165.1| hypothetical protein PRUPE_ppa025241mg [Prunus pe...   289   1e-75
ref|XP_006437829.1| hypothetical protein CICLE_v10033304mg [Citr...   288   2e-75
ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat...   288   2e-75

>ref|XP_006493918.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g52630-like [Citrus sinensis]
          Length = 610

 Score =  307 bits (787), Expect = 3e-81
 Identities = 150/297 (50%), Positives = 201/297 (67%)
 Frame = +1

Query: 1    ALVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRP 180
            +L+DMYAKC  +K AR VFDEMPERNVV+W+G+I GYA +G   EA  +F + L + L  
Sbjct: 178  SLLDMYAKCGQLKTARKVFDEMPERNVVSWTGMIYGYAQSGETGEALSLFKQALYENLDV 237

Query: 181  NDFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVF 360
            NDFTFS V + C N   L+ G+Q H LC++   +    VGSSLIS+YSKCG +E   RVF
Sbjct: 238  NDFTFSSVLNVCGNTTVLELGKQIHGLCVKTSFDSSSFVGSSLISLYSKCGVIEPAYRVF 297

Query: 361  EGMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVD 540
            + +  R+L MWNAM+    QH H ++   LF+ ++R GL P+ ++FLCVL AC+HAG V+
Sbjct: 298  QEVRVRNLGMWNAMLIACAQHSHTNKVFDLFKEMERFGLKPNFITFLCVLYACSHAGLVE 357

Query: 541  EGLGYFEEMKRVYGIRPRLEHHACIVDVLARGGRLEEAYEFIKGMPFVSTESVWGALLHG 720
            +G  YFE M + YG+ P   H A +VDVL R G+L+EA   I+ MP   TESVWGALL G
Sbjct: 358  KGKYYFELMNK-YGVEPGAHHFASLVDVLGRAGKLQEAVSVIEKMPIAPTESVWGALLTG 416

Query: 721  CRMHENVELGEIAAHKLFELNPSCSGTYTLLANLYASVGRWEDFARLKRMMRERGIR 891
            CR+H N EL   AA ++FEL     G   LL+N YA+ GRWED A+ ++M+R+RG++
Sbjct: 417  CRIHGNTELAAYAADRVFELGTVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDRGVK 473



 Score =  117 bits (293), Expect = 6e-24
 Identities = 71/265 (26%), Positives = 128/265 (48%), Gaps = 6/265 (2%)
 Frame = +1

Query: 4   LVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRPN 183
           L++ Y+K +    AR VFDE   ++  TWS +I  +A N L   A   F   + +   P+
Sbjct: 78  LINFYSKTQRPLFARQVFDEATLKSATTWSSVISSFAQNELPCLALEYFRRMIGERRFPD 137

Query: 184 DFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVFE 363
           D  F      CA +   + G   H L ++ G +  + V SSL+ MY+KCG L+   +VF+
Sbjct: 138 DHIFPSATKSCAILGDFNAGASIHCLVVKIGYDFDVFVNSSLLDMYAKCGQLKTARKVFD 197

Query: 364 GMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVDE 543
            M  R++  W  M++G+ Q G   EA+ LF+    + L  ++ +F  VL+ C +   ++ 
Sbjct: 198 EMPERNVVSWTGMIYGYAQSGETGEALSLFKQALYENLDVNDFTFSSVLNVCGNTTVLEL 257

Query: 544 GLGYFEEMKRVYGIRPRLEHH------ACIVDVLARGGRLEEAYEFIKGMPFVSTESVWG 705
           G       K+++G+  +          + ++ + ++ G +E AY   + +  V    +W 
Sbjct: 258 G-------KQIHGLCVKTSFDSSSFVGSSLISLYSKCGVIEPAYRVFQEVR-VRNLGMWN 309

Query: 706 ALLHGCRMHENVELGEIAAHKLFEL 780
           A+L  C  H +        +K+F+L
Sbjct: 310 AMLIACAQHSH-------TNKVFDL 327


>ref|XP_006349560.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g52630-like [Solanum tuberosum]
          Length = 596

 Score =  305 bits (781), Expect = 1e-80
 Identities = 147/297 (49%), Positives = 206/297 (69%)
 Frame = +1

Query: 1    ALVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRP 180
            +LVDMYAKC +++ AR VFD+MPERNVV+WSG+I GYA    DEEA R+F   L +GL  
Sbjct: 164  SLVDMYAKCGNIEIARKVFDQMPERNVVSWSGMIYGYAQMAEDEEALRLFKLALVEGLDV 223

Query: 181  NDFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVF 360
            NDFTFS V   CAN   L+ G+Q H LCL+   +    +G++LIS+YSKCG +E   RVF
Sbjct: 224  NDFTFSSVIRVCANSTLLELGKQIHGLCLKTSYDSSSFIGTALISLYSKCGLVEGAYRVF 283

Query: 361  EGMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVD 540
              +  R+L MWNAM+    QHGH  +   LF+ ++  G+ P+ ++FLCVL AC+HAG V 
Sbjct: 284  NEVPVRNLGMWNAMLIACAQHGHTEKVFGLFKEMESIGMKPNFITFLCVLYACSHAGLVP 343

Query: 541  EGLGYFEEMKRVYGIRPRLEHHACIVDVLARGGRLEEAYEFIKGMPFVSTESVWGALLHG 720
            EG  YF+ MK+ +G+ P  +H+A +VD L R G+L+EA + I+ MP   TESVWGALL G
Sbjct: 344  EGKFYFDLMKK-HGVEPGDQHYASLVDCLGRAGKLQEAVQVIEKMPMQPTESVWGALLTG 402

Query: 721  CRMHENVELGEIAAHKLFELNPSCSGTYTLLANLYASVGRWEDFARLKRMMRERGIR 891
            CR+H+N EL    A ++FEL P  SG + LL+N YA+ GR+++ A+ ++M+R++G++
Sbjct: 403  CRIHKNTELAAYVADRVFELGPVSSGVHVLLSNAYAAAGRYQEAAKARKMLRDKGVK 459



 Score =  122 bits (305), Expect = 2e-25
 Identities = 67/253 (26%), Positives = 127/253 (50%), Gaps = 6/253 (2%)
 Frame = +1

Query: 4   LVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRPN 183
           L++ Y+K +   D+ +VF E   ++  TWS +I   + N     A + F + L++G+ P+
Sbjct: 64  LINFYSKLQRPIDSTLVFHETHSKSSTTWSSVISSLSQNEQPILALQFFRQMLHNGVTPD 123

Query: 184 DFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVFE 363
           D  F      C  +     G+  H    + G +  + VGSSL+ MY+KCG +E   +VF+
Sbjct: 124 DHIFPCATKACGILCDYRIGQSIHCFSFKIGFDSDVFVGSSLVDMYAKCGNIEIARKVFD 183

Query: 364 GMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVDE 543
            M  R++  W+ M++G+ Q     EA+RLF+    +GL  ++ +F  V+  C ++  ++ 
Sbjct: 184 QMPERNVVSWSGMIYGYAQMAEDEEALRLFKLALVEGLDVNDFTFSSVIRVCANSTLLEL 243

Query: 544 GLGYFEEMKRVYGIRPRLEHHA------CIVDVLARGGRLEEAYEFIKGMPFVSTESVWG 705
           G       K+++G+  +  + +       ++ + ++ G +E AY     +P V    +W 
Sbjct: 244 G-------KQIHGLCLKTSYDSSSFIGTALISLYSKCGLVEGAYRVFNEVP-VRNLGMWN 295

Query: 706 ALLHGCRMHENVE 744
           A+L  C  H + E
Sbjct: 296 AMLIACAQHGHTE 308


>ref|XP_004234835.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g52630-like [Solanum lycopersicum]
          Length = 596

 Score =  304 bits (779), Expect = 3e-80
 Identities = 148/297 (49%), Positives = 205/297 (69%)
 Frame = +1

Query: 1    ALVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRP 180
            +LVDMYAKC++++ AR VFD+MPERNVV+WSG+I GYA    DEEA R+F   L +GL  
Sbjct: 164  SLVDMYAKCRNIEIARKVFDQMPERNVVSWSGMIYGYAQIAEDEEALRLFKLALGEGLDV 223

Query: 181  NDFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVF 360
            NDFTFS V   CAN   L+ G+Q H LCL+   +    +GS+LIS+YSKCG +E   RVF
Sbjct: 224  NDFTFSSVIRVCANSTLLELGKQIHGLCLKTSYDSSSFIGSALISLYSKCGLVEGAYRVF 283

Query: 361  EGMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVD 540
              +  R+L MWNAM+    QHGH  +   LF+ ++   + P+ ++FLCVL AC+HAG V 
Sbjct: 284  NEVPVRNLGMWNAMLIACAQHGHTEKVFGLFKEMEGIVMKPNFITFLCVLYACSHAGLVP 343

Query: 541  EGLGYFEEMKRVYGIRPRLEHHACIVDVLARGGRLEEAYEFIKGMPFVSTESVWGALLHG 720
            EG  YF+ MK+ +G+ P  +H+A +VD L R G+L+EA + I+ MP   TESVWGALL G
Sbjct: 344  EGKFYFDLMKK-HGVEPGDQHYASLVDCLGRAGKLQEAVQVIEKMPMEPTESVWGALLTG 402

Query: 721  CRMHENVELGEIAAHKLFELNPSCSGTYTLLANLYASVGRWEDFARLKRMMRERGIR 891
            CR+H+N EL    A ++ EL P  SG + LL+N YA+ GR+E+ A+ ++M+R+RG++
Sbjct: 403  CRIHKNTELAAYVADRVLELGPVSSGLHVLLSNAYAAAGRYEEAAKARKMLRDRGVK 459



 Score =  121 bits (304), Expect = 3e-25
 Identities = 67/253 (26%), Positives = 127/253 (50%), Gaps = 6/253 (2%)
 Frame = +1

Query: 4   LVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRPN 183
           L++ Y+K +   D+ +VFDE   ++  TWS +I   + N     A + F + L++G+ P+
Sbjct: 64  LINFYSKLQRPIDSTLVFDETLSKSSTTWSSVISSLSQNEQPILALQFFRQMLHNGVTPD 123

Query: 184 DFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVFE 363
           D  F      C  +     G+  H    + G +  + VGSSL+ MY+KC  +E   +VF+
Sbjct: 124 DHIFPCATKACGILCDYRIGQSIHCFAFKIGFDSDVFVGSSLVDMYAKCRNIEIARKVFD 183

Query: 364 GMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVDE 543
            M  R++  W+ M++G+ Q     EA+RLF+    +GL  ++ +F  V+  C ++  ++ 
Sbjct: 184 QMPERNVVSWSGMIYGYAQIAEDEEALRLFKLALGEGLDVNDFTFSSVIRVCANSTLLEL 243

Query: 544 GLGYFEEMKRVYGIRPRLEHH------ACIVDVLARGGRLEEAYEFIKGMPFVSTESVWG 705
           G       K+++G+  +  +       + ++ + ++ G +E AY     +P V    +W 
Sbjct: 244 G-------KQIHGLCLKTSYDSSSFIGSALISLYSKCGLVEGAYRVFNEVP-VRNLGMWN 295

Query: 706 ALLHGCRMHENVE 744
           A+L  C  H + E
Sbjct: 296 AMLIACAQHGHTE 308


>ref|XP_002322703.2| hypothetical protein POPTR_0016s05390g [Populus trichocarpa]
            gi|550320891|gb|EEF04464.2| hypothetical protein
            POPTR_0016s05390g [Populus trichocarpa]
          Length = 627

 Score =  304 bits (778), Expect = 3e-80
 Identities = 150/297 (50%), Positives = 201/297 (67%)
 Frame = +1

Query: 1    ALVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRP 180
            +LVDMYAKC  +K+AR VFDEMP+RNVV+WSG+I GY   G  EEA R+F E L +GL  
Sbjct: 195  SLVDMYAKCGDIKEARNVFDEMPQRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLDV 254

Query: 181  NDFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVF 360
            NDFT S V   C +   L+ G+Q H LC +   +    VGSSLIS+YSKCG +E   RVF
Sbjct: 255  NDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGAYRVF 314

Query: 361  EGMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVD 540
            + +  ++L MWNAM+    QH H  EA  LF  ++  G+ P+ ++FLCVL AC+HAG V+
Sbjct: 315  DEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACSHAGLVE 374

Query: 541  EGLGYFEEMKRVYGIRPRLEHHACIVDVLARGGRLEEAYEFIKGMPFVSTESVWGALLHG 720
            EG  YF  MK+ Y I P  +H+A +VD+L R G+L+EA   IKGMP   TESVWGA + G
Sbjct: 375  EGKKYFALMKK-YEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESVWGAFITG 433

Query: 721  CRMHENVELGEIAAHKLFELNPSCSGTYTLLANLYASVGRWEDFARLKRMMRERGIR 891
            CR+H N +L   AA K+FEL    SG + +L+N YA+ GR+ED A+ ++M+R+RG++
Sbjct: 434  CRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGRYEDAAKARKMLRDRGVK 490



 Score =  122 bits (306), Expect = 2e-25
 Identities = 67/253 (26%), Positives = 127/253 (50%), Gaps = 6/253 (2%)
 Frame = +1

Query: 4   LVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRPN 183
           L++ Y+K +    +  VF+E   ++  TWS +I  +A N     A + F   + + L P+
Sbjct: 95  LINFYSKTQLPLLSSQVFEESERKSSTTWSSVISSFAQNEEPVLAIQYFCRMIGENLCPD 154

Query: 184 DFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVFE 363
           D  F      CA +   D G+  H L ++ G +  + VGSSL+ MY+KCG +++   VF+
Sbjct: 155 DHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFD 214

Query: 364 GMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVDE 543
            M  R++  W+ M++G+ Q G   EA+RLF+    +GL  ++ +   V+  C  A  ++ 
Sbjct: 215 EMPQRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLEL 274

Query: 544 GLGYFEEMKRVYGIRPRLEHH------ACIVDVLARGGRLEEAYEFIKGMPFVSTESVWG 705
           G       K+++G+  +  +       + ++ + ++ G +E AY     +P +    +W 
Sbjct: 275 G-------KQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEVP-IKNLGMWN 326

Query: 706 ALLHGCRMHENVE 744
           A+L  C  H + +
Sbjct: 327 AMLIACAQHAHTK 339


>ref|XP_006421438.1| hypothetical protein CICLE_v10005013mg [Citrus clementina]
           gi|557523311|gb|ESR34678.1| hypothetical protein
           CICLE_v10005013mg [Citrus clementina]
          Length = 429

 Score =  299 bits (766), Expect = 8e-79
 Identities = 147/293 (50%), Positives = 197/293 (67%)
 Frame = +1

Query: 13  MYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRPNDFT 192
           MYAKC  +K AR VFDEMPERNVV+W+G+I GYA +G   EA  +F + L + L  NDFT
Sbjct: 1   MYAKCGQLKTARKVFDEMPERNVVSWTGMIYGYAQSGETGEALSLFKQALYENLDVNDFT 60

Query: 193 FSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVFEGMS 372
           FS V + C N   L+ G+Q H LC++   +    VGSSLIS+YSKCG +E   +VFE + 
Sbjct: 61  FSSVLNVCGNTTVLELGKQIHGLCVKTSFDSSSFVGSSLISLYSKCGVIEPAYQVFEEVR 120

Query: 373 HRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVDEGLG 552
            R+L MWNAM+    QH H ++   LF+ ++R GL P+ +SFLCVL AC+HAG V++G  
Sbjct: 121 VRNLGMWNAMLIACAQHSHMNKVFDLFKEMERFGLKPNFISFLCVLYACSHAGLVEKGKY 180

Query: 553 YFEEMKRVYGIRPRLEHHACIVDVLARGGRLEEAYEFIKGMPFVSTESVWGALLHGCRMH 732
           YFE M + YG+ P   H A +VD+L R G+L+EA   I+ MP   TESVWGALL GCR+H
Sbjct: 181 YFELMNK-YGVDPAAHHFASLVDLLGRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIH 239

Query: 733 ENVELGEIAAHKLFELNPSCSGTYTLLANLYASVGRWEDFARLKRMMRERGIR 891
            N EL   AA ++FEL     G   LL+N YA+ GRWED A+ ++M+R++G++
Sbjct: 240 GNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVK 292



 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 41/168 (24%), Positives = 83/168 (49%), Gaps = 1/168 (0%)
 Frame = +1

Query: 1   ALVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRP 180
           +L+ +Y+KC  ++ A  VF+E+  RN+  W+ ++   A +    + F +F E    GL+P
Sbjct: 98  SLISLYSKCGVIEPAYQVFEEVRVRNLGMWNAMLIACAQHSHMNKVFDLFKEMERFGLKP 157

Query: 181 NDFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVF 360
           N  +F  V   C++   +++G+    L  + G++      +SL+ +  + G L++   V 
Sbjct: 158 NFISFLCVLYACSHAGLVEKGKYYFELMNKYGVDPAAHHFASLVDLLGRAGKLQEAISVI 217

Query: 361 EGMSHRSLQ-MWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFL 501
           E M     + +W A++ G   HG+   A    + +   G+V   ++ L
Sbjct: 218 EKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVL 265


>gb|EXB53136.1| hypothetical protein L484_006956 [Morus notabilis]
          Length = 616

 Score =  298 bits (763), Expect = 2e-78
 Identities = 144/297 (48%), Positives = 199/297 (67%)
 Frame = +1

Query: 1    ALVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRP 180
            ++VDM+AKC  ++DAR VFD+MPERNVV+WSG+I GY L G DEEA R+F   L + L  
Sbjct: 184  SMVDMFAKCGEIRDARKVFDKMPERNVVSWSGMISGYVLLGEDEEALRLFKRVLVEDLDV 243

Query: 181  NDFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVF 360
            NDFTFS +   C N   L+ GRQ H LC +   +    VG+SL+S+YS+CG +E   RVF
Sbjct: 244  NDFTFSSIVRVCGNATLLELGRQIHGLCFKTSFDSSSFVGTSLVSLYSRCGVIEGAYRVF 303

Query: 361  EGMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVD 540
              +S ++L +WNAM+    QH   ++A  LFE +   G+ P+ ++FLC+L AC+H+G V 
Sbjct: 304  NEISVKNLGLWNAMLIACAQHAQTNKAFALFEDMICVGMKPNFITFLCLLYACSHSGLVK 363

Query: 541  EGLGYFEEMKRVYGIRPRLEHHACIVDVLARGGRLEEAYEFIKGMPFVSTESVWGALLHG 720
            +G  YFE MK  YGI P  +H+A ++D+L R G+L++A   I+ MP   TES+WGALL G
Sbjct: 364  KGRYYFELMKE-YGIEPGHQHYASLIDLLGRAGKLQDAVSIIENMPIKPTESIWGALLTG 422

Query: 721  CRMHENVELGEIAAHKLFELNPSCSGTYTLLANLYASVGRWEDFARLKRMMRERGIR 891
            CR+H N EL    A K+ EL    SG   LL+N YA+ GRWE+ AR ++M+R++GIR
Sbjct: 423  CRIHGNTELASFVADKISELGNVGSGLLVLLSNAYAAAGRWEEAARARKMLRDQGIR 479



 Score =  125 bits (314), Expect = 2e-26
 Identities = 81/285 (28%), Positives = 138/285 (48%), Gaps = 10/285 (3%)
 Frame = +1

Query: 4   LVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRPN 183
           L++ Y+K +    +  VFDE P ++  TWS +I   A N L   A  +F   L +GLR +
Sbjct: 84  LINFYSKTQFPLHSLQVFDETPHKSSTTWSSVISSLAQNELPFIALELFRRMLGEGLRAD 143

Query: 184 DFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVFE 363
           D  +  V    A +  +D G+  H L ++ G N  + VGSS++ M++KCG + D  +VF+
Sbjct: 144 DHIYPSVTKSIAILGRIDAGKCVHGLVIKTGFNSDVFVGSSMVDMFAKCGEIRDARKVFD 203

Query: 364 GMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVDE 543
            M  R++  W+ M+ G+   G   EA+RLF+ +  + L  ++ +F  ++  C +A  ++ 
Sbjct: 204 KMPERNVVSWSGMISGYVLLGEDEEALRLFKRVLVEDLDVNDFTFSSIVRVCGNATLLEL 263

Query: 544 GLGYFEEMKRVYGIRPRLEHHA------CIVDVLARGGRLEEAYEFIKGMPFVSTESVWG 705
           G       ++++G+  +    +       +V + +R G +E AY     +  V    +W 
Sbjct: 264 G-------RQIHGLCFKTSFDSSSFVGTSLVSLYSRCGVIEGAYRVFNEIS-VKNLGLWN 315

Query: 706 ALLHGCRMHENVELGEIAAHKLFELNPSCSGT----YTLLANLYA 828
           A+L  C  H         A  LFE +  C G      T L  LYA
Sbjct: 316 AMLIACAQHAQTN----KAFALFE-DMICVGMKPNFITFLCLLYA 355


>gb|EMJ05752.1| hypothetical protein PRUPE_ppa016618mg, partial [Prunus persica]
          Length = 524

 Score =  297 bits (760), Expect = 4e-78
 Identities = 143/297 (48%), Positives = 202/297 (68%)
 Frame = +1

Query: 1   ALVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRP 180
           ++VDMYAKC  ++DAR +FD++P +NVV+WSG+I GYA  G DEEA R+F + L   L  
Sbjct: 92  SVVDMYAKCGEIRDARKMFDDIPHKNVVSWSGMIYGYAQVGEDEEALRLFKQALVQNLDV 151

Query: 181 NDFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVF 360
           NDFTFS V   C N   L+ G+Q H LC +   N    VGSSL+S+YSKCG +E   RVF
Sbjct: 152 NDFTFSSVIRVCGNSTLLELGKQIHGLCFKTNFNLSSFVGSSLVSLYSKCGVIEGAYRVF 211

Query: 361 EGMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVD 540
           + +  ++L MWNAM+    QH H  +A+ LF+ +   G+ P+ ++FLCVL AC+HAG V+
Sbjct: 212 DEIPVKNLGMWNAMLIACAQHVHTDKALDLFKQMGSAGMKPNFITFLCVLYACSHAGLVE 271

Query: 541 EGLGYFEEMKRVYGIRPRLEHHACIVDVLARGGRLEEAYEFIKGMPFVSTESVWGALLHG 720
           +G  YF  MK  YGI P  +H+A +VD+L R G+LEEA + I+ MP   TES+WGALL G
Sbjct: 272 KGQYYFALMKE-YGIEPGEQHYASLVDLLGRAGKLEEAVKIIEEMPIEPTESIWGALLTG 330

Query: 721 CRMHENVELGEIAAHKLFELNPSCSGTYTLLANLYASVGRWEDFARLKRMMRERGIR 891
           CR+H + EL    A ++FEL P   G + L++N YA+ GR+E+ A+ ++M+R+RG++
Sbjct: 331 CRIHGDTELAASVADRVFELGPVSPGLHVLMSNAYAAAGRFEEAAKARKMLRDRGMK 387



 Score =  130 bits (326), Expect = 9e-28
 Identities = 68/240 (28%), Positives = 125/240 (52%), Gaps = 6/240 (2%)
 Frame = +1

Query: 43  ARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRPNDFTFSMVFSGCAN 222
           +R +F+E PE++  TWS +I  +A N L   A   F   L   LRP+D  +  V   CA 
Sbjct: 5   SRQIFEEAPEKSSTTWSSVISSFAQNELPVLAIEYFRRMLGTPLRPDDHIYPSVTKSCAI 64

Query: 223 MAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVFEGMSHRSLQMWNAM 402
           ++  D G+  H   ++ G    + VGSS++ MY+KCG + D  ++F+ + H+++  W+ M
Sbjct: 65  LSRRDVGQSVHGFAVKTGFEFDVFVGSSVVDMYAKCGEIRDARKMFDDIPHKNVVSWSGM 124

Query: 403 VFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVDEGLGYFEEMKRVYG 582
           ++G+ Q G   EA+RLF+    Q L  ++ +F  V+  C ++  ++ G       K+++G
Sbjct: 125 IYGYAQVGEDEEALRLFKQALVQNLDVNDFTFSSVIRVCGNSTLLELG-------KQIHG 177

Query: 583 IRPRLEHH------ACIVDVLARGGRLEEAYEFIKGMPFVSTESVWGALLHGCRMHENVE 744
           +  +   +      + +V + ++ G +E AY     +P V    +W A+L  C  H + +
Sbjct: 178 LCFKTNFNLSSFVGSSLVSLYSKCGVIEGAYRVFDEIP-VKNLGMWNAMLIACAQHVHTD 236


>gb|EOY09326.1| Mitochondrial RNAediting factor 1 [Theobroma cacao]
          Length = 595

 Score =  295 bits (756), Expect = 1e-77
 Identities = 149/297 (50%), Positives = 196/297 (65%)
 Frame = +1

Query: 1    ALVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRP 180
            +LVDMY KC  +  AR VFDEMPERNVV+W+G+I GYA  G  EEA  +F + L   L  
Sbjct: 163  SLVDMYGKCGKINVARKVFDEMPERNVVSWTGMIYGYAQLGEYEEALMLFKQALYRRLDV 222

Query: 181  NDFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVF 360
            NDFTFS V   CAN   L+ G+Q H LC +   N    VGSSLIS+YSKCG +E    VF
Sbjct: 223  NDFTFSSVLQVCANSTLLELGKQTHGLCFKTNYNLSSFVGSSLISLYSKCGVIEGAYLVF 282

Query: 361  EGMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVD 540
            + +  R+L MWNAM+    QH H   A  LF+ ++  G+ P+ ++FLCVL AC+HAG V+
Sbjct: 283  DEVCVRNLGMWNAMLIACAQHSHTERAFDLFKQMEGVGIKPNFITFLCVLYACSHAGLVE 342

Query: 541  EGLGYFEEMKRVYGIRPRLEHHACIVDVLARGGRLEEAYEFIKGMPFVSTESVWGALLHG 720
            +G  YFE MK  Y I P  +H+A +VD+L R G+L+EA   I+ MP   TESVWGA L G
Sbjct: 343  KGQHYFELMKE-YKIEPGDQHYASLVDLLGRAGKLQEALSIIREMPIQPTESVWGAFLMG 401

Query: 721  CRMHENVELGEIAAHKLFELNPSCSGTYTLLANLYASVGRWEDFARLKRMMRERGIR 891
            CR+H N EL   AA ++F+L P  SG + LL+N YA+ GR+ED A+ ++M+R+ GI+
Sbjct: 402  CRIHGNTELAAYAADRIFDLGPVSSGLHVLLSNAYAAAGRYEDAAKARKMLRDLGIK 458



 Score =  121 bits (304), Expect = 3e-25
 Identities = 71/253 (28%), Positives = 125/253 (49%), Gaps = 6/253 (2%)
 Frame = +1

Query: 4   LVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRPN 183
           L++ Y+K +    +R +F E P R+  TWS +I  +A N L   A   F E L + ++P+
Sbjct: 63  LLNFYSKTQLPLFSRQIFFETPIRSSTTWSSVISSFAQNELPSLAIEFFREMLVNNIKPD 122

Query: 184 DFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVFE 363
           D  F      CA +   D G+  H L L+ G +  + V SSL+ MY KCG +    +VF+
Sbjct: 123 DHIFPSATKSCATLGRFDLGQSIHCLILKTGYDMDVFVASSLVDMYGKCGKINVARKVFD 182

Query: 364 GMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVDE 543
            M  R++  W  M++G+ Q G   EA+ LF+    + L  ++ +F  VL  C ++  ++ 
Sbjct: 183 EMPERNVVSWTGMIYGYAQLGEYEEALMLFKQALYRRLDVNDFTFSSVLQVCANSTLLEL 242

Query: 544 GLGYFEEMKRVYGIRPRLEHH------ACIVDVLARGGRLEEAYEFIKGMPFVSTESVWG 705
           G       K+ +G+  +  ++      + ++ + ++ G +E AY  +     V    +W 
Sbjct: 243 G-------KQTHGLCFKTNYNLSSFVGSSLISLYSKCGVIEGAY-LVFDEVCVRNLGMWN 294

Query: 706 ALLHGCRMHENVE 744
           A+L  C  H + E
Sbjct: 295 AMLIACAQHSHTE 307


>gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  292 bits (747), Expect = 1e-76
 Identities = 132/297 (44%), Positives = 195/297 (65%)
 Frame = +1

Query: 1    ALVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRP 180
            ALV+MYAKC +V  A  +F+ MP++NVV W+ +I GY+ +G   EA  +F E    G++P
Sbjct: 362  ALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKP 421

Query: 181  NDFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVF 360
            + F    V   CA+  AL+QG+Q H   ++ G    ++VG+ L+ +Y+KCG +    ++F
Sbjct: 422  DSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLF 481

Query: 361  EGMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVD 540
            E M  + +  W  M+  +G HGHG +A+ LF  ++  G   D ++F  +L+AC+HAG VD
Sbjct: 482  ERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVD 541

Query: 541  EGLGYFEEMKRVYGIRPRLEHHACIVDVLARGGRLEEAYEFIKGMPFVSTESVWGALLHG 720
            +GL YF+ MK  YG+ P+LEH+AC+VD+L R G L+EA   IK M      +VWGALL  
Sbjct: 542  QGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGA 601

Query: 721  CRMHENVELGEIAAHKLFELNPSCSGTYTLLANLYASVGRWEDFARLKRMMRERGIR 891
            CR+H N+ELGE AA  LFEL+P  +G Y LL+N+YA   RWED A+L++MM+E+G++
Sbjct: 602  CRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVK 658



 Score =  162 bits (411), Expect = 1e-37
 Identities = 84/248 (33%), Positives = 141/248 (56%), Gaps = 4/248 (1%)
 Frame = +1

Query: 1   ALVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRP 180
           AL  MY KC  +++AR VFD MP+R+VV+W+ +I GY+ NG   EA  +F E   +G++P
Sbjct: 160 ALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKP 219

Query: 181 NDFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVF 360
           N  T   V   CA++ AL+QG+Q H   ++ GI   +LV + L++MY+KCG +    ++F
Sbjct: 220 NSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLF 279

Query: 361 EGMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVD 540
           E M  R +  WNA++ G+  +   HEA+  F  ++ +G+ P+ ++ + VL AC H   ++
Sbjct: 280 ERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALE 339

Query: 541 EGLGYFEEMKRVYGIRPRLEHH----ACIVDVLARGGRLEEAYEFIKGMPFVSTESVWGA 708
           +G     +    Y IR   E +      +V++ A+ G +  AY+  + MP  +  + W A
Sbjct: 340 QG-----QQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVA-WNA 393

Query: 709 LLHGCRMH 732
           ++ G   H
Sbjct: 394 IISGYSQH 401



 Score =  162 bits (411), Expect = 1e-37
 Identities = 87/253 (34%), Positives = 142/253 (56%), Gaps = 6/253 (2%)
 Frame = +1

Query: 4   LVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRPN 183
           LV+MYAKC +V  A  +F+ MP R+V +W+ +I GY+LN    EA   F      G++PN
Sbjct: 262 LVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPN 321

Query: 184 DFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVFE 363
             T   V   CA++ AL+QG+Q H   ++ G     +VG++L++MY+KCG +    ++FE
Sbjct: 322 SITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFE 381

Query: 364 GMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVDE 543
            M  +++  WNA++ G+ QHGH HEA+ LF  ++ QG+ PD  + + VL AC H   +++
Sbjct: 382 RMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQ 441

Query: 544 GLGYFEEMKRVYG--IRPRLEHHACI----VDVLARGGRLEEAYEFIKGMPFVSTESVWG 705
           G       K+++G  IR   E +  +    VD+ A+ G +  A +  + MP     S W 
Sbjct: 442 G-------KQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVS-WT 493

Query: 706 ALLHGCRMHENVE 744
            ++    +H + E
Sbjct: 494 TMILAYGIHGHGE 506



 Score =  127 bits (318), Expect = 7e-27
 Identities = 67/219 (30%), Positives = 113/219 (51%), Gaps = 4/219 (1%)
 Frame = +1

Query: 76  NVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRPNDFTFSMVFSGCANMAALDQGRQAH 255
           N V W   I GY  NG   +A R++Y+    G+ P+   F  V   C + + L  GR+ H
Sbjct: 84  NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143

Query: 256 ALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVFEGMSHRSLQMWNAMVFGFGQHGHGH 435
              +  G    ++VG++L SMY+KCG LE+  +VF+ M  R +  WNA++ G+ Q+G  +
Sbjct: 144 EDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPY 203

Query: 436 EAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVDEGLGYFEEMKRVYGIRPRLEHHACI 615
           EA+ LF  ++  G+ P+  + + V+  C H   +++G     +    Y IR  +E    +
Sbjct: 204 EALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQG-----KQIHCYAIRSGIESDVLV 258

Query: 616 VDVL----ARGGRLEEAYEFIKGMPFVSTESVWGALLHG 720
           V+ L    A+ G +  A++  + MP     S W A++ G
Sbjct: 259 VNGLVNMYAKCGNVNTAHKLFERMPIRDVAS-WNAIIGG 296


>ref|XP_006280222.1| hypothetical protein CARUB_v10026131mg [Capsella rubella]
            gi|482548926|gb|EOA13120.1| hypothetical protein
            CARUB_v10026131mg [Capsella rubella]
          Length = 588

 Score =  291 bits (746), Expect = 2e-76
 Identities = 149/295 (50%), Positives = 198/295 (67%)
 Frame = +1

Query: 1    ALVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRP 180
            +LVDMYAKC  + DAR +FDEMP RNVVTWSG++ GYA  G +EEA  +F E L + L  
Sbjct: 156  SLVDMYAKCGDIVDARNMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAV 215

Query: 181  NDFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVF 360
            ND++FS V S CAN   L+ GRQ   L ++   +    VGSSL+S+YSKCG LE   +VF
Sbjct: 216  NDYSFSTVISVCANSTLLELGRQIQGLSIKSSFDSSSFVGSSLVSLYSKCGVLEGAYKVF 275

Query: 361  EGMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVD 540
              +  ++L +WNAM+    QH H  E I LF+ +K  G+ P+ ++FL VL+AC+HAG VD
Sbjct: 276  HEVPVKNLGIWNAMLKACAQHSHTQEVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVD 335

Query: 541  EGLGYFEEMKRVYGIRPRLEHHACIVDVLARGGRLEEAYEFIKGMPFVSTESVWGALLHG 720
            EG  YF+ MK    I P  +H+A +VD+L R G+LEEA E IK MP   TESVWGALL  
Sbjct: 336  EGKYYFDLMKE-SRIEPTDKHYAALVDMLGRAGKLEEALEIIKNMPINPTESVWGALLTS 394

Query: 721  CRMHENVELGEIAAHKLFELNPSCSGTYTLLANLYASVGRWEDFARLKRMMRERG 885
            C +H+N EL   AA K+FEL P  SG +  L+N YA+ GR+ED A+ ++++R+RG
Sbjct: 395  CTIHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRG 449



 Score =  126 bits (316), Expect = 1e-26
 Identities = 69/253 (27%), Positives = 127/253 (50%), Gaps = 6/253 (2%)
 Frame = +1

Query: 4   LVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRPN 183
           L++ Y+K +   D+R  F++ P+++  TWS +I  +A N L   +     + +   LRP+
Sbjct: 56  LINFYSKSQLPFDSRRAFEDSPQKSATTWSSIISCFAQNELPWMSLEFLRKMMAGNLRPD 115

Query: 184 DFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVFE 363
           D         C  ++  D GR  H L  + G +  + VGSSL+ MY+KCG + D   +F+
Sbjct: 116 DHVLPSATKSCGILSRCDIGRSVHCLSKKTGYDADVFVGSSLVDMYAKCGDIVDARNMFD 175

Query: 364 GMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVDE 543
            M  R++  W+ M++G+ Q G   EA+ LF+    + L  ++ SF  V+S C ++  ++ 
Sbjct: 176 EMPLRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSTVISVCANSTLLEL 235

Query: 544 GLGYFEEMKRVYGIRPRLEHH------ACIVDVLARGGRLEEAYEFIKGMPFVSTESVWG 705
           G       +++ G+  +          + +V + ++ G LE AY+    +P V    +W 
Sbjct: 236 G-------RQIQGLSIKSSFDSSSFVGSSLVSLYSKCGVLEGAYKVFHEVP-VKNLGIWN 287

Query: 706 ALLHGCRMHENVE 744
           A+L  C  H + +
Sbjct: 288 AMLKACAQHSHTQ 300


>ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g52630-like [Glycine max]
          Length = 582

 Score =  291 bits (746), Expect = 2e-76
 Identities = 148/299 (49%), Positives = 193/299 (64%), Gaps = 2/299 (0%)
 Frame = +1

Query: 1    ALVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDG--L 174
            +LVD YAKC  V  AR VFDEMP +NVV+WSG+I GY+  GLDEEA  +F   L     +
Sbjct: 148  SLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKRALEQDYDI 207

Query: 175  RPNDFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTR 354
            R NDFT S V   C+     + G+Q H LC +   +    V SSLIS+YSKCG +E G +
Sbjct: 208  RVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSKCGVVEGGYK 267

Query: 355  VFEGMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGF 534
            VFE +  R+L MWNAM+    QH H      LFE ++R G+ P+ ++FLC+L AC+HAG 
Sbjct: 268  VFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLCLLYACSHAGL 327

Query: 535  VDEGLGYFEEMKRVYGIRPRLEHHACIVDVLARGGRLEEAYEFIKGMPFVSTESVWGALL 714
            V++G   F  MK  +GI P  +H+A +VD+L R G+LEEA   IK MP   TESVWGALL
Sbjct: 328  VEKGEHCFGLMKE-HGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPTESVWGALL 386

Query: 715  HGCRMHENVELGEIAAHKLFELNPSCSGTYTLLANLYASVGRWEDFARLKRMMRERGIR 891
             GCR+H N EL    A K+FE+    SG   LL+N YA+ GRWE+ AR ++MMR++GI+
Sbjct: 387  TGCRIHGNTELASFVADKVFEMGAVSSGIQVLLSNAYAAAGRWEEAARARKMMRDQGIK 445



 Score =  108 bits (271), Expect = 2e-21
 Identities = 68/251 (27%), Positives = 120/251 (47%), Gaps = 8/251 (3%)
 Frame = +1

Query: 4   LVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRPN 183
           L++ Y+K      +  +FD  P ++  TWS +I  +A N L   A R F   L  GL P+
Sbjct: 48  LINFYSKTNLPHSSLKLFDSFPHKSATTWSSVISSFAQNDLPLPALRFFRRMLRHGLLPD 107

Query: 184 DFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVFE 363
           D T        A +++L      HAL L+   +  + VGSSL+  Y+KCG +    +VF+
Sbjct: 108 DHTLPTAAKSVAALSSLPLALSLHALSLKTAHHHDVFVGSSLVDTYAKCGDVNLARKVFD 167

Query: 364 GMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQ--GLVPDEVSFLCVLSACNHAGFV 537
            M H+++  W+ M++G+ Q G   EA+ LF+    Q   +  ++ +   VL  C+ +   
Sbjct: 168 EMPHKNVVSWSGMIYGYSQMGLDEEALNLFKRALEQDYDIRVNDFTLSSVLRVCSASTL- 226

Query: 538 DEGLGYFEEMKRVYGIRPRLEHH------ACIVDVLARGGRLEEAYEFIKGMPFVSTESV 699
                 FE  K+V+G+  +          + ++ + ++ G +E  Y+  + +  V    +
Sbjct: 227 ------FELGKQVHGLCFKTSFDSSCFVASSLISLYSKCGVVEGGYKVFEEVK-VRNLGM 279

Query: 700 WGALLHGCRMH 732
           W A+L  C  H
Sbjct: 280 WNAMLIACAQH 290


>ref|XP_006654247.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16860-like
            [Oryza brachyantha]
          Length = 884

 Score =  291 bits (744), Expect = 3e-76
 Identities = 140/303 (46%), Positives = 202/303 (66%), Gaps = 6/303 (1%)
 Frame = +1

Query: 1    ALVDMYAKCKHVKDARMVFDEMP--ERNVVTWSGLICGYALNGLDEEAFRVFYEGLND-- 168
            AL+DMY+KC+  K AR +F  +P  ERNVVTW+ +I GYA  G   +A ++F E +++  
Sbjct: 445  ALIDMYSKCRSFKAARSIFHNIPLEERNVVTWTVMIGGYAQYGDSNDALKLFVEMISEPY 504

Query: 169  GLRPNDFTFSMVFSGCANMAALDQGRQAHALCLQCGI--NDYILVGSSLISMYSKCGCLE 342
            G+ PN FT S +   CA++AAL  G+Q HA  L+     +    V + LI MYSKCG ++
Sbjct: 505  GVAPNAFTISCILMACAHLAALRMGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVD 564

Query: 343  DGTRVFEGMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACN 522
                VF+ M  RS   W +M+ G+G HG G EA+ +F+++++ G VPD+++FL VL AC+
Sbjct: 565  TARHVFDSMPQRSAVSWTSMMTGYGMHGRGSEALDIFDNMRKAGFVPDDIAFLVVLYACS 624

Query: 523  HAGFVDEGLGYFEEMKRVYGIRPRLEHHACIVDVLARGGRLEEAYEFIKGMPFVSTESVW 702
            H G VD+GL YF+ M   YG+ P  EH+AC +D+LAR GRL++A+E +  MP   T  VW
Sbjct: 625  HCGMVDQGLAYFDSMSADYGLTPSAEHYACAIDLLARSGRLDKAWETVNDMPMEPTAVVW 684

Query: 703  GALLHGCRMHENVELGEIAAHKLFELNPSCSGTYTLLANLYASVGRWEDFARLKRMMRER 882
             ALL  CR+H NVEL E A +KL E+N    G+YTL++N+YA+ GRW+D AR++ +M++ 
Sbjct: 685  VALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYANAGRWKDVARIRHLMKKS 744

Query: 883  GIR 891
            GIR
Sbjct: 745  GIR 747



 Score =  115 bits (287), Expect = 3e-23
 Identities = 78/272 (28%), Positives = 132/272 (48%), Gaps = 28/272 (10%)
 Frame = +1

Query: 1    ALVDMYAKCKHVKDARMVFDEMPERN----VVTWSGLICGYALNGLDEEAFRVFYEGLND 168
            A+V  Y++  + + A  +F+ M + N    VVTW+ +I GY+  G   EA  VF + L  
Sbjct: 330  AMVTGYSQSGNFEAAFELFNNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNVFQQMLFS 389

Query: 169  GLRPNDFTFSMVFSGCANMAALDQGRQAHA-------LCLQC---GINDYILVGSSLISM 318
            G  PN  T   V S CA++ A  QG + HA       L + C   G ++ ++V ++LI M
Sbjct: 390  GSLPNSVTIISVLSACASLGAFSQGMEIHAYSIKNCLLTMDCDFGGDDEDLMVHNALIDM 449

Query: 319  YSKCGCLEDGTRVFEG--MSHRSLQMWNAMVFGFGQHGHGHEAIRLFESI--KRQGLVPD 486
            YSKC   +    +F    +  R++  W  M+ G+ Q+G  ++A++LF  +  +  G+ P+
Sbjct: 450  YSKCRSFKAARSIFHNIPLEERNVVTWTVMIGGYAQYGDSNDALKLFVEMISEPYGVAPN 509

Query: 487  EVSFLCVLSACNHAGFVDEGLGYFEEMKRVYGIRPRLEHHA----------CIVDVLARG 636
              +  C+L AC H   +  G       K+++     L HH           C++D+ ++ 
Sbjct: 510  AFTISCILMACAHLAALRMG-------KQIHAY--VLRHHRYESSAYFVANCLIDMYSKC 560

Query: 637  GRLEEAYEFIKGMPFVSTESVWGALLHGCRMH 732
            G ++ A      MP  S  S W +++ G  MH
Sbjct: 561  GDVDTARHVFDSMPQRSAVS-WTSMMTGYGMH 591



 Score =  103 bits (258), Expect = 7e-20
 Identities = 55/200 (27%), Positives = 110/200 (55%), Gaps = 11/200 (5%)
 Frame = +1

Query: 1   ALVDMYAKCKHVKDARMVFDEMPER---NVVTWSGLICGY--------ALNGLDEEAFRV 147
           ALV MY++C +++++ +VFDE+ +R   +V++W+ ++  +        AL+   +    V
Sbjct: 189 ALVAMYSRCGYLEESHIVFDEIIQRGIDDVISWNSIVSAHVKGSNPWTALHLFSKMTLIV 248

Query: 148 FYEGLNDGLRPNDFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSK 327
             +  N+  R +  +   +   CA++ A+ Q ++ H   ++ G    + VG++LI  Y+K
Sbjct: 249 HEKATNE--RSDIISIVNILPACASLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAK 306

Query: 328 CGCLEDGTRVFEGMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCV 507
           CG +E+  +VF  M  + +  WNAMV G+ Q G+   A  LF +++++ +  D V++  V
Sbjct: 307 CGLMENAVKVFNMMEFKDVVSWNAMVTGYSQSGNFEAAFELFNNMRKENIPLDVVTWTAV 366

Query: 508 LSACNHAGFVDEGLGYFEEM 567
           ++  +  G   E L  F++M
Sbjct: 367 IAGYSQRGCSHEALNVFQQM 386



 Score = 74.7 bits (182), Expect = 4e-11
 Identities = 71/272 (26%), Positives = 112/272 (41%), Gaps = 15/272 (5%)
 Frame = +1

Query: 4   LVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRPN 183
           +V  Y  C     A +V + +     V W+ LI  +   G  + A  V    L  G RP+
Sbjct: 89  VVASYLSCGVTDYALLVLERVTPSPAVWWNLLIREHIKQGCLDSAIAVSCRMLRAGTRPD 148

Query: 184 DFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVFE 363
            FT   V   C  + +   G   H L    G    + + ++L++MYS+CG LE+   VF+
Sbjct: 149 HFTLPHVLKACGELPSYLCGITFHGLICCNGFESNVFICNALVAMYSRCGYLEESHIVFD 208

Query: 364 GMSHRSLQ---MWNAMVFGFGQHGHGHEAIRLFESI------KRQGLVPDEVSFLCVLSA 516
            +  R +     WN++V    +  +   A+ LF  +      K      D +S + +L A
Sbjct: 209 EIIQRGIDDVISWNSIVSAHVKGSNPWTALHLFSKMTLIVHEKATNERSDIISIVNILPA 268

Query: 517 CNHAGFVDEGLGYFEEMKRVYG--IR----PRLEHHACIVDVLARGGRLEEAYEFIKGMP 678
           C         L    + K V+G  IR    P +     ++D  A+ G +E A +    M 
Sbjct: 269 C-------ASLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMME 321

Query: 679 FVSTESVWGALLHGCRMHENVELGEIAAHKLF 774
           F    S W A++ G     N E    AA +LF
Sbjct: 322 FKDVVS-WNAMVTGYSQSGNFE----AAFELF 348


>ref|XP_002308737.1| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|222854713|gb|EEE92260.1|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 590

 Score =  291 bits (744), Expect = 3e-76
 Identities = 131/297 (44%), Positives = 204/297 (68%)
 Frame = +1

Query: 1    ALVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRP 180
            A++DMYA+C H+++A+++FD M  +N V+W+ LI GYA  G  ++AF +F   L + ++P
Sbjct: 158  AILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKP 217

Query: 181  NDFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVF 360
              FT+S V   CA+M +L+QG+  HAL ++ G      VG++L+ MY+K G +ED  +VF
Sbjct: 218  THFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVF 277

Query: 361  EGMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVD 540
            + ++ R +  WN+M+ G+ QHG G  A++ FE + R  + P++++FLCVL+AC+HAG +D
Sbjct: 278  DRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLD 337

Query: 541  EGLGYFEEMKRVYGIRPRLEHHACIVDVLARGGRLEEAYEFIKGMPFVSTESVWGALLHG 720
            EG  YF+ MK+ Y + P++ H+  +VD+L R G L+ A +FI  MP   T +VWGALL  
Sbjct: 338  EGRHYFDMMKK-YNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGA 396

Query: 721  CRMHENVELGEIAAHKLFELNPSCSGTYTLLANLYASVGRWEDFARLKRMMRERGIR 891
            CRMH+N+ELG  AA  +FEL+    GT+ LL N+YA  GRW D A++++MM+E G++
Sbjct: 397  CRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKMMKESGVK 453



 Score =  139 bits (351), Expect = 1e-30
 Identities = 79/261 (30%), Positives = 142/261 (54%), Gaps = 2/261 (0%)
 Frame = +1

Query: 4   LVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRPN 183
           L+++YAKC  +  AR +FDEM  R+VVTW+ LI GY+ +   ++A  +  E L  GL+PN
Sbjct: 56  LLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPN 115

Query: 184 DFTFSMVFSGCANMAALD--QGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRV 357
            FT + +    + + + D  QGRQ H LCL+ G +  + V  +++ MY++C  LE+   +
Sbjct: 116 QFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLI 175

Query: 358 FEGMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFV 537
           F+ M  ++   WNA++ G+ + G G +A  LF ++ R+ + P   ++  VL AC   G +
Sbjct: 176 FDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSL 235

Query: 538 DEGLGYFEEMKRVYGIRPRLEHHACIVDVLARGGRLEEAYEFIKGMPFVSTESVWGALLH 717
           ++G  +   +   +G +        ++D+ A+ G +E+A +    +      S W ++L 
Sbjct: 236 EQG-KWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVS-WNSMLT 293

Query: 718 GCRMHENVELGEIAAHKLFEL 780
           G   H    LG++A  +  E+
Sbjct: 294 GYSQH---GLGKVALQRFEEM 311



 Score = 82.4 bits (202), Expect = 2e-13
 Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 1/170 (0%)
 Frame = +1

Query: 214 CANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVFEGMSHRSLQMW 393
           C ++  L++G+  HAL L     D +++ ++L+++Y+KCG L    ++F+ MS R +  W
Sbjct: 25  CTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTW 84

Query: 394 NAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVDEGLG-YFEEMK 570
            A++ G+ QH    +A+ L   + R GL P++ +   +L A +  G  D   G     + 
Sbjct: 85  TALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLC 144

Query: 571 RVYGIRPRLEHHACIVDVLARGGRLEEAYEFIKGMPFVSTESVWGALLHG 720
             YG    +     I+D+ AR   LEEA + I  +     E  W AL+ G
Sbjct: 145 LRYGYDSNVYVSCAILDMYARCHHLEEA-QLIFDVMVSKNEVSWNALIAG 193


>ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
            gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza
            sativa Japonica Group]
          Length = 890

 Score =  290 bits (743), Expect = 4e-76
 Identities = 138/303 (45%), Positives = 205/303 (67%), Gaps = 6/303 (1%)
 Frame = +1

Query: 1    ALVDMYAKCKHVKDARMVFDEMP--ERNVVTWSGLICGYALNGLDEEAFRVFYEGLND-- 168
            AL+DMY+KC+  K AR +FD++P  ERNVVTW+ +I G+A  G   +A ++F E +++  
Sbjct: 451  ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 510

Query: 169  GLRPNDFTFSMVFSGCANMAALDQGRQAHALCLQCGI--NDYILVGSSLISMYSKCGCLE 342
            G+ PN +T S +   CA++AA+  G+Q HA  L+     +    V + LI MYSKCG ++
Sbjct: 511  GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVD 570

Query: 343  DGTRVFEGMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACN 522
                VF+ MS +S   W +M+ G+G HG G EA+ +F+ +++ G VPD+++FL VL AC+
Sbjct: 571  TARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACS 630

Query: 523  HAGFVDEGLGYFEEMKRVYGIRPRLEHHACIVDVLARGGRLEEAYEFIKGMPFVSTESVW 702
            H G VD+GL YF+ M   YG+ PR EH+AC +D+LAR GRL++A+  +K MP   T  VW
Sbjct: 631  HCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVW 690

Query: 703  GALLHGCRMHENVELGEIAAHKLFELNPSCSGTYTLLANLYASVGRWEDFARLKRMMRER 882
             ALL  CR+H NVEL E A +KL E+N    G+YTL++N+YA+ GRW+D AR++ +M++ 
Sbjct: 691  VALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKS 750

Query: 883  GIR 891
            GI+
Sbjct: 751  GIK 753



 Score =  106 bits (264), Expect = 1e-20
 Identities = 76/272 (27%), Positives = 129/272 (47%), Gaps = 28/272 (10%)
 Frame = +1

Query: 1    ALVDMYAKCKHVKDARMVFDEMPERN----VVTWSGLICGYALNGLDEEAFRVFYEGLND 168
            A+V  Y++  + + A  +F  M + N    VVTW+ +I GY+  G   EA  +F + +  
Sbjct: 336  AMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFS 395

Query: 169  GLRPNDFTFSMVFSGCANMAALDQGRQAHAL----CLQCGINDY------ILVGSSLISM 318
            G  PN  T   V S CA++ A  QG + HA     CL    ND+      ++V ++LI M
Sbjct: 396  GSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDM 455

Query: 319  YSKCGCLEDGTRVFEG--MSHRSLQMWNAMVFGFGQHGHGHEAIRLFESI--KRQGLVPD 486
            YSKC   +    +F+   +  R++  W  M+ G  Q+G  ++A++LF  +  +  G+ P+
Sbjct: 456  YSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPN 515

Query: 487  EVSFLCVLSACNHAGFVDEGLGYFEEMKRVYGIRPRLEHHA----------CIVDVLARG 636
              +  C+L AC H   +  G       K+++     L HH           C++D+ ++ 
Sbjct: 516  AYTISCILMACAHLAAIRIG-------KQIHAY--VLRHHRYESSAYFVANCLIDMYSKC 566

Query: 637  GRLEEAYEFIKGMPFVSTESVWGALLHGCRMH 732
            G ++ A      M   S  S W +++ G  MH
Sbjct: 567  GDVDTARHVFDSMSQKSAIS-WTSMMTGYGMH 597



 Score =  102 bits (255), Expect = 1e-19
 Identities = 55/200 (27%), Positives = 108/200 (54%), Gaps = 11/200 (5%)
 Frame = +1

Query: 1   ALVDMYAKCKHVKDARMVFDEMPER---NVVTWSGLICGY--------ALNGLDEEAFRV 147
           ALV MY++C  +++A M+FDE+ +R   +V++W+ ++  +        AL+   +    V
Sbjct: 195 ALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIV 254

Query: 148 FYEGLNDGLRPNDFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSK 327
             +  N+  R +  +   +   C ++ A+ Q ++ H   ++ G    + VG++LI  Y+K
Sbjct: 255 HEKPTNE--RSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAK 312

Query: 328 CGCLEDGTRVFEGMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCV 507
           CG +E+  +VF  M  + +  WNAMV G+ Q G+   A  LF++++++ +  D V++  V
Sbjct: 313 CGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAV 372

Query: 508 LSACNHAGFVDEGLGYFEEM 567
           ++  +  G   E L  F +M
Sbjct: 373 IAGYSQRGCSHEALNLFRQM 392



 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 70/273 (25%), Positives = 115/273 (42%), Gaps = 15/273 (5%)
 Frame = +1

Query: 4   LVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRPN 183
           +V  Y  C     A +V + +     V W+ LI  +   G  + A  V    L  G RP+
Sbjct: 95  VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPD 154

Query: 184 DFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVFE 363
            FT   V   C  + +   G   H L    G    + + ++L++MYS+CG LE+ + +F+
Sbjct: 155 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 214

Query: 364 GMSHRSLQ---MWNAMVFGFGQHGHGHEAIRLFESI------KRQGLVPDEVSFLCVLSA 516
            ++ R +     WN++V    +  +   A+ LF  +      K      D +S + +L A
Sbjct: 215 EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPA 274

Query: 517 CNHAGFVDEGLGYFEEMKRVYG--IR----PRLEHHACIVDVLARGGRLEEAYEFIKGMP 678
           C         L    + K V+G  IR    P +     ++D  A+ G +E A +    M 
Sbjct: 275 CG-------SLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMME 327

Query: 679 FVSTESVWGALLHGCRMHENVELGEIAAHKLFE 777
           F    S W A++ G     N E    AA +LF+
Sbjct: 328 FKDVVS-WNAMVAGYSQSGNFE----AAFELFK 355


>emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  290 bits (743), Expect = 4e-76
 Identities = 138/303 (45%), Positives = 205/303 (67%), Gaps = 6/303 (1%)
 Frame = +1

Query: 1    ALVDMYAKCKHVKDARMVFDEMP--ERNVVTWSGLICGYALNGLDEEAFRVFYEGLND-- 168
            AL+DMY+KC+  K AR +FD++P  ERNVVTW+ +I G+A  G   +A ++F E +++  
Sbjct: 458  ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 517

Query: 169  GLRPNDFTFSMVFSGCANMAALDQGRQAHALCLQCGI--NDYILVGSSLISMYSKCGCLE 342
            G+ PN +T S +   CA++AA+  G+Q HA  L+     +    V + LI MYSKCG ++
Sbjct: 518  GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVD 577

Query: 343  DGTRVFEGMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACN 522
                VF+ MS +S   W +M+ G+G HG G EA+ +F+ +++ G VPD+++FL VL AC+
Sbjct: 578  TARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACS 637

Query: 523  HAGFVDEGLGYFEEMKRVYGIRPRLEHHACIVDVLARGGRLEEAYEFIKGMPFVSTESVW 702
            H G VD+GL YF+ M   YG+ PR EH+AC +D+LAR GRL++A+  +K MP   T  VW
Sbjct: 638  HCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVW 697

Query: 703  GALLHGCRMHENVELGEIAAHKLFELNPSCSGTYTLLANLYASVGRWEDFARLKRMMRER 882
             ALL  CR+H NVEL E A +KL E+N    G+YTL++N+YA+ GRW+D AR++ +M++ 
Sbjct: 698  VALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKS 757

Query: 883  GIR 891
            GI+
Sbjct: 758  GIK 760



 Score =  106 bits (264), Expect = 1e-20
 Identities = 76/272 (27%), Positives = 129/272 (47%), Gaps = 28/272 (10%)
 Frame = +1

Query: 1    ALVDMYAKCKHVKDARMVFDEMPERN----VVTWSGLICGYALNGLDEEAFRVFYEGLND 168
            A+V  Y++  + + A  +F  M + N    VVTW+ +I GY+  G   EA  +F + +  
Sbjct: 343  AMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFS 402

Query: 169  GLRPNDFTFSMVFSGCANMAALDQGRQAHAL----CLQCGINDY------ILVGSSLISM 318
            G  PN  T   V S CA++ A  QG + HA     CL    ND+      ++V ++LI M
Sbjct: 403  GSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDM 462

Query: 319  YSKCGCLEDGTRVFEG--MSHRSLQMWNAMVFGFGQHGHGHEAIRLFESI--KRQGLVPD 486
            YSKC   +    +F+   +  R++  W  M+ G  Q+G  ++A++LF  +  +  G+ P+
Sbjct: 463  YSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPN 522

Query: 487  EVSFLCVLSACNHAGFVDEGLGYFEEMKRVYGIRPRLEHHA----------CIVDVLARG 636
              +  C+L AC H   +  G       K+++     L HH           C++D+ ++ 
Sbjct: 523  AYTISCILMACAHLAAIRIG-------KQIHAY--VLRHHRYESSAYFVANCLIDMYSKC 573

Query: 637  GRLEEAYEFIKGMPFVSTESVWGALLHGCRMH 732
            G ++ A      M   S  S W +++ G  MH
Sbjct: 574  GDVDTARHVFDSMSQKSAIS-WTSMMTGYGMH 604



 Score =  102 bits (255), Expect = 1e-19
 Identities = 55/200 (27%), Positives = 108/200 (54%), Gaps = 11/200 (5%)
 Frame = +1

Query: 1   ALVDMYAKCKHVKDARMVFDEMPER---NVVTWSGLICGY--------ALNGLDEEAFRV 147
           ALV MY++C  +++A M+FDE+ +R   +V++W+ ++  +        AL+   +    V
Sbjct: 202 ALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIV 261

Query: 148 FYEGLNDGLRPNDFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSK 327
             +  N+  R +  +   +   C ++ A+ Q ++ H   ++ G    + VG++LI  Y+K
Sbjct: 262 HEKPTNE--RSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAK 319

Query: 328 CGCLEDGTRVFEGMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCV 507
           CG +E+  +VF  M  + +  WNAMV G+ Q G+   A  LF++++++ +  D V++  V
Sbjct: 320 CGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAV 379

Query: 508 LSACNHAGFVDEGLGYFEEM 567
           ++  +  G   E L  F +M
Sbjct: 380 IAGYSQRGCSHEALNLFRQM 399



 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 70/273 (25%), Positives = 115/273 (42%), Gaps = 15/273 (5%)
 Frame = +1

Query: 4   LVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRPN 183
           +V  Y  C     A +V + +     V W+ LI  +   G  + A  V    L  G RP+
Sbjct: 102 VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPD 161

Query: 184 DFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVFE 363
            FT   V   C  + +   G   H L    G    + + ++L++MYS+CG LE+ + +F+
Sbjct: 162 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 221

Query: 364 GMSHRSLQ---MWNAMVFGFGQHGHGHEAIRLFESI------KRQGLVPDEVSFLCVLSA 516
            ++ R +     WN++V    +  +   A+ LF  +      K      D +S + +L A
Sbjct: 222 EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPA 281

Query: 517 CNHAGFVDEGLGYFEEMKRVYG--IR----PRLEHHACIVDVLARGGRLEEAYEFIKGMP 678
           C         L    + K V+G  IR    P +     ++D  A+ G +E A +    M 
Sbjct: 282 CG-------SLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMME 334

Query: 679 FVSTESVWGALLHGCRMHENVELGEIAAHKLFE 777
           F    S W A++ G     N E    AA +LF+
Sbjct: 335 FKDVVS-WNAMVAGYSQSGNFE----AAFELFK 362


>ref|NP_200075.1| pentatricopeptide repeat protein MEF1 [Arabidopsis thaliana]
            gi|75180446|sp|Q9LTF4.1|PP429_ARATH RecName:
            Full=Putative pentatricopeptide repeat-containing protein
            At5g52630 gi|8953718|dbj|BAA98081.1| selenium-binding
            protein-like [Arabidopsis thaliana]
            gi|332008860|gb|AED96243.1| pentatricopeptide repeat
            protein MEF1 [Arabidopsis thaliana]
          Length = 588

 Score =  290 bits (742), Expect = 5e-76
 Identities = 146/295 (49%), Positives = 199/295 (67%)
 Frame = +1

Query: 1    ALVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRP 180
            +LVDMYAKC  +  AR +FDEMP+RNVVTWSG++ GYA  G +EEA  +F E L + L  
Sbjct: 156  SLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAV 215

Query: 181  NDFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVF 360
            ND++FS V S CAN   L+ GRQ H L ++   +    VGSSL+S+YSKCG  E   +VF
Sbjct: 216  NDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVF 275

Query: 361  EGMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVD 540
              +  ++L +WNAM+  + QH H  + I LF+ +K  G+ P+ ++FL VL+AC+HAG VD
Sbjct: 276  NEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVD 335

Query: 541  EGLGYFEEMKRVYGIRPRLEHHACIVDVLARGGRLEEAYEFIKGMPFVSTESVWGALLHG 720
            EG  YF++MK    I P  +H+A +VD+L R GRL+EA E I  MP   TESVWGALL  
Sbjct: 336  EGRYYFDQMKE-SRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTS 394

Query: 721  CRMHENVELGEIAAHKLFELNPSCSGTYTLLANLYASVGRWEDFARLKRMMRERG 885
            C +H+N EL   AA K+FEL P  SG +  L+N YA+ GR+ED A+ ++++R+RG
Sbjct: 395  CTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRG 449



 Score =  121 bits (304), Expect = 3e-25
 Identities = 67/253 (26%), Positives = 128/253 (50%), Gaps = 6/253 (2%)
 Frame = +1

Query: 4   LVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRPN 183
           L++ Y+K +   D+R  F++ P+++  TWS +I  +A N L   +     + +   LRP+
Sbjct: 56  LINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPD 115

Query: 184 DFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVFE 363
           D         CA ++  D GR  H L ++ G +  + VGSSL+ MY+KCG +    ++F+
Sbjct: 116 DHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFD 175

Query: 364 GMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVDE 543
            M  R++  W+ M++G+ Q G   EA+ LF+    + L  ++ SF  V+S C ++  ++ 
Sbjct: 176 EMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLEL 235

Query: 544 GLGYFEEMKRVYGIRPRLEHH------ACIVDVLARGGRLEEAYEFIKGMPFVSTESVWG 705
           G       ++++G+  +          + +V + ++ G  E AY+    +P V    +W 
Sbjct: 236 G-------RQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVP-VKNLGIWN 287

Query: 706 ALLHGCRMHENVE 744
           A+L     H + +
Sbjct: 288 AMLKAYAQHSHTQ 300


>ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297310020|gb|EFH40444.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 588

 Score =  289 bits (740), Expect = 8e-76
 Identities = 147/295 (49%), Positives = 198/295 (67%)
 Frame = +1

Query: 1    ALVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRP 180
            +LVDMYAKC  +  AR +FDEMP RNVVTWSG++ GYA  G +EEA  +F E L + L  
Sbjct: 156  SLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAV 215

Query: 181  NDFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVF 360
            ND++FS V S CAN   L+ GRQ   LC++   +    VGSSL+S+YSKCG LE   +VF
Sbjct: 216  NDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQVF 275

Query: 361  EGMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVD 540
            + +  R+L +WNAM+    QH H  + I LF+ +K  G+ P+ ++FL VL+AC+HAG VD
Sbjct: 276  DEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVD 335

Query: 541  EGLGYFEEMKRVYGIRPRLEHHACIVDVLARGGRLEEAYEFIKGMPFVSTESVWGALLHG 720
            EG  YF+ MK    I P  +H+A +VD+L R G+LEEA E +  MP   TESVWGALL  
Sbjct: 336  EGKYYFDLMKE-SRIEPTDKHYASLVDMLGRAGKLEEALEIVTNMPIDPTESVWGALLTS 394

Query: 721  CRMHENVELGEIAAHKLFELNPSCSGTYTLLANLYASVGRWEDFARLKRMMRERG 885
            C +H+N EL   AA K+FEL P  SG +  L+N YA+ GR+ED A+ ++++R+RG
Sbjct: 395  CTIHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRG 449



 Score =  122 bits (305), Expect = 2e-25
 Identities = 66/253 (26%), Positives = 128/253 (50%), Gaps = 6/253 (2%)
 Frame = +1

Query: 4   LVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRPN 183
           L++ Y+K +   D+R  F++ P+++  TWS +I  +A N L   +     + +   LRP+
Sbjct: 56  LINFYSKSQLPFDSRRAFEDSPQKSATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPD 115

Query: 184 DFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVFE 363
           D         C  ++  D G+  H L ++ G +  + VGSSL+ MY+KCG +    ++F+
Sbjct: 116 DHVLPSATKSCGILSRCDIGKSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFD 175

Query: 364 GMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVDE 543
            M  R++  W+ M++G+ Q G   EA+ LF+    + L  ++ SF  V+S C ++  ++ 
Sbjct: 176 EMPLRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSTVISVCANSTLLEL 235

Query: 544 GLGYFEEMKRVYGIRPRLEHH------ACIVDVLARGGRLEEAYEFIKGMPFVSTESVWG 705
           G       +++ G+  +          + +V + ++ G LE AY+    +P +    +W 
Sbjct: 236 G-------RQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQVFDEVP-MRNLGIWN 287

Query: 706 ALLHGCRMHENVE 744
           A+L  C  H + +
Sbjct: 288 AMLKACAQHSHTQ 300


>gb|EMJ28165.1| hypothetical protein PRUPE_ppa025241mg [Prunus persica]
          Length = 743

 Score =  289 bits (739), Expect = 1e-75
 Identities = 137/297 (46%), Positives = 192/297 (64%)
 Frame = +1

Query: 1    ALVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRP 180
            ALVDMY KC+ +K A  VF  M  +NVV+W+ ++ GY  NG  EEA RVF +    G+ P
Sbjct: 310  ALVDMYCKCRSIKAAEGVFKRMSYKNVVSWTAMLVGYGQNGYSEEAVRVFCDMQRKGVEP 369

Query: 181  NDFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVF 360
            +DFT   V S CAN+A+L++G Q H   L  G+  +I V ++L+++Y KCG +ED  R+F
Sbjct: 370  DDFTLGSVISSCANLASLEEGAQFHCQALASGLISFITVSNALVTLYGKCGSIEDSHRLF 429

Query: 361  EGMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVD 540
              M+ R    W A+V G+ Q G  +E I LFE +   GL PD V+F+ VLSAC+ AG VD
Sbjct: 430  NEMNIRDEVSWTALVSGYAQFGKAYETIDLFERMLAHGLKPDGVTFIGVLSACSRAGLVD 489

Query: 541  EGLGYFEEMKRVYGIRPRLEHHACIVDVLARGGRLEEAYEFIKGMPFVSTESVWGALLHG 720
            +G  YFE M + +GI P ++H+ CI+D+L+R GRLEEA  FI  MPF      W  LL  
Sbjct: 490  KGHQYFESMVKEHGITPIMDHYTCIIDLLSRAGRLEEAKRFINEMPFHPDAIGWATLLSS 549

Query: 721  CRMHENVELGEIAAHKLFELNPSCSGTYTLLANLYASVGRWEDFARLKRMMRERGIR 891
            CR+H N+E+G+ AA  L EL P    +Y LL+++YA+ G+W + A L+R MR++G+R
Sbjct: 550  CRLHRNIEIGKWAAESLLELEPQNPASYILLSSIYAAKGKWNEVANLRRGMRDKGVR 606



 Score =  144 bits (363), Expect = 4e-32
 Identities = 78/261 (29%), Positives = 146/261 (55%), Gaps = 5/261 (1%)
 Frame = +1

Query: 4   LVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRPN 183
           L+    +C  ++D+  +F +MPE++ ++W+ +I G   NG   +A   F E + +GL  +
Sbjct: 210 LITGLLRCGLIEDSECLFSKMPEKDSISWTTMITGLTQNGSGSKALDKFREMILEGLSMD 269

Query: 184 DFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVFE 363
            +TF  V + C  + AL++G+Q HA  ++  + D I VGS+L+ MY KC  ++    VF+
Sbjct: 270 QYTFGSVLTACGGLFALEEGKQVHAYIIRTELIDNIFVGSALVDMYCKCRSIKAAEGVFK 329

Query: 364 GMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVDE 543
            MS++++  W AM+ G+GQ+G+  EA+R+F  ++R+G+ PD+ +   V+S+C +   ++E
Sbjct: 330 RMSYKNVVSWTAMLVGYGQNGYSEEAVRVFCDMQRKGVEPDDFTLGSVISSCANLASLEE 389

Query: 544 GLGYFEEMKRVYGIRPRLEHHACIVDVLARGGRLEEAYEFIKGMPFVSTESVWGALLHGC 723
           G   F       G+   +     +V +  + G +E+++     M  +  E  W AL+ G 
Sbjct: 390 G-AQFHCQALASGLISFITVSNALVTLYGKCGSIEDSHRLFNEMN-IRDEVSWTALVSGY 447

Query: 724 ----RMHENVELGE-IAAHKL 771
               + +E ++L E + AH L
Sbjct: 448 AQFGKAYETIDLFERMLAHGL 468



 Score =  112 bits (279), Expect = 2e-22
 Identities = 83/278 (29%), Positives = 129/278 (46%), Gaps = 38/278 (13%)
 Frame = +1

Query: 1   ALVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRP 180
           A++ +Y+K  ++ D + +FD MP  + V+W+  I G+A  GL  EA + +   L DG   
Sbjct: 76  AILSVYSKSGYLSDMQEIFDRMPRLDGVSWNSFISGHASCGLLAEAVKFYSLMLTDGAAN 135

Query: 181 -NDFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRV 357
            N  TFS +   C++   ++ GRQ H   ++ G   Y+ VGS L+ MYSK G + D  RV
Sbjct: 136 LNRITFSTMLVLCSSQRCVNLGRQLHGHIVKFGFESYVFVGSPLVDMYSKAGLILDAKRV 195

Query: 358 FEGMSHRSLQM-------------------------------WNAMVFGFGQHGHGHEAI 444
           F  M  R++ M                               W  M+ G  Q+G G +A+
Sbjct: 196 FNSMPERNVVMYNTLITGLLRCGLIEDSECLFSKMPEKDSISWTTMITGLTQNGSGSKAL 255

Query: 445 RLFESIKRQGLVPDEVSFLCVLSACNHAGFVDEGLGYFEEMKRV--YGIRPRLEHH---- 606
             F  +  +GL  D+ +F  VL+AC        GL   EE K+V  Y IR  L  +    
Sbjct: 256 DKFREMILEGLSMDQYTFGSVLTACG-------GLFALEEGKQVHAYIIRTELIDNIFVG 308

Query: 607 ACIVDVLARGGRLEEAYEFIKGMPFVSTESVWGALLHG 720
           + +VD+  +   ++ A    K M + +  S W A+L G
Sbjct: 309 SALVDMYCKCRSIKAAEGVFKRMSYKNVVS-WTAMLVG 345


>ref|XP_006437829.1| hypothetical protein CICLE_v10033304mg [Citrus clementina]
            gi|568861577|ref|XP_006484277.1| PREDICTED: putative
            pentatricopeptide repeat-containing protein
            At1g68930-like [Citrus sinensis]
            gi|557540025|gb|ESR51069.1| hypothetical protein
            CICLE_v10033304mg [Citrus clementina]
          Length = 743

 Score =  288 bits (736), Expect = 2e-75
 Identities = 137/297 (46%), Positives = 194/297 (65%)
 Frame = +1

Query: 1    ALVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRP 180
            ALVDMY KCK +K A  VF +M  +NVV+W+ ++ GY  NG  EEA ++F     +G+ P
Sbjct: 310  ALVDMYCKCKSIKYAESVFRKMARKNVVSWTAMLVGYGQNGCSEEAVKIFCNMQRNGIEP 369

Query: 181  NDFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVF 360
            +DFT   V S CAN+A+L++G Q H   L  G+  +I V ++L++ Y KCG +ED  R+F
Sbjct: 370  DDFTLGSVISSCANLASLEEGTQFHGRSLVTGLISFITVSNALVTFYGKCGNIEDSHRLF 429

Query: 361  EGMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVD 540
              M+ R    W A+V G+ + G  +E I LFE +   GL PDEV+ + VLSAC+ AG V+
Sbjct: 430  NEMNVRDEVSWTALVSGYAKFGKANETIDLFEKMLSHGLKPDEVTLIGVLSACSRAGLVE 489

Query: 541  EGLGYFEEMKRVYGIRPRLEHHACIVDVLARGGRLEEAYEFIKGMPFVSTESVWGALLHG 720
            +G  YFE M + YGIRP  +H+ C++D+L+R GRLEEA  FI  MPF      W  LL  
Sbjct: 490  KGRHYFEIMVKEYGIRPIHDHYTCMIDILSRAGRLEEAKSFINKMPFPPDTIGWATLLSS 549

Query: 721  CRMHENVELGEIAAHKLFELNPSCSGTYTLLANLYASVGRWEDFARLKRMMRERGIR 891
            CR+H NVE+G+ AA  L EL+P    +Y LL+++YAS G+W+  ++L+R MRE+G+R
Sbjct: 550  CRIHGNVEIGKWAAESLLELDPYNPASYVLLSSIYASKGKWDHVSQLRRTMREKGVR 606



 Score =  143 bits (360), Expect = 1e-31
 Identities = 86/285 (30%), Positives = 144/285 (50%), Gaps = 35/285 (12%)
 Frame = +1

Query: 4    LVDMYAKCKHVKDARMVFDEMPERNVV-------------------------------TW 90
            LVDMYAK   + DA+  FDE+PE+N+V                               +W
Sbjct: 179  LVDMYAKLGLIYDAKRGFDELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISW 238

Query: 91   SGLICGYALNGLDEEAFRVFYEGLNDGLRPNDFTFSMVFSGCANMAALDQGRQAHALCLQ 270
            + +I G   NGL+ EA  +F E   +GL  + FTF  V + C  + AL++G+Q HA  ++
Sbjct: 239  TTMITGLMQNGLEREAIDLFREMRLEGLAMDQFTFGSVLTACGGLLALEEGKQIHAFIIR 298

Query: 271  CGINDYILVGSSLISMYSKCGCLEDGTRVFEGMSHRSLQMWNAMVFGFGQHGHGHEAIRL 450
                D + VGS+L+ MY KC  ++    VF  M+ +++  W AM+ G+GQ+G   EA+++
Sbjct: 299  NDHKDNVFVGSALVDMYCKCKSIKYAESVFRKMARKNVVSWTAMLVGYGQNGCSEEAVKI 358

Query: 451  FESIKRQGLVPDEVSFLCVLSACNHAGFVDEGLGYFEEMKRVYGIRPRLEHHACIVDVLA 630
            F +++R G+ PD+ +   V+S+C +   ++EG   F     V G+   +     +V    
Sbjct: 359  FCNMQRNGIEPDDFTLGSVISSCANLASLEEGT-QFHGRSLVTGLISFITVSNALVTFYG 417

Query: 631  RGGRLEEAYEFIKGMPFVSTESVWGALLHGC----RMHENVELGE 753
            + G +E+++     M  V  E  W AL+ G     + +E ++L E
Sbjct: 418  KCGNIEDSHRLFNEMN-VRDEVSWTALVSGYAKFGKANETIDLFE 461



 Score =  102 bits (253), Expect = 2e-19
 Identities = 77/277 (27%), Positives = 125/277 (45%), Gaps = 38/277 (13%)
 Frame = +1

Query: 4   LVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGL-RP 180
           ++  Y+K  ++ +   VF  MP  + V+W+ LI G+A +G   +A +V+   L DGL   
Sbjct: 77  ILSAYSKSGNLSEMNSVFHYMPFHDGVSWNLLISGHASHGSVNDAVKVYNLMLKDGLGNL 136

Query: 181 NDFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCL------- 339
           +  TFS +    ++   +D GRQ H   L+ G   Y+ VGS L+ MY+K G +       
Sbjct: 137 SRITFSTMLIMSSSRRCVDLGRQIHGHILKFGFGSYVFVGSPLVDMYAKLGLIYDAKRGF 196

Query: 340 ------------------------EDGTRVFEGMSHRSLQMWNAMVFGFGQHGHGHEAIR 447
                                   E+  R+F GM  +    W  M+ G  Q+G   EAI 
Sbjct: 197 DELPEKNIVMYNTMITGLLRRGLVEESRRLFRGMKDKDSISWTTMITGLMQNGLEREAID 256

Query: 448 LFESIKRQGLVPDEVSFLCVLSACNHAGFVDEGLGYFEEMKRVYGIRPRLEHH------A 609
           LF  ++ +GL  D+ +F  VL+AC        GL   EE K+++    R +H       +
Sbjct: 257 LFREMRLEGLAMDQFTFGSVLTACG-------GLLALEEGKQIHAFIIRNDHKDNVFVGS 309

Query: 610 CIVDVLARGGRLEEAYEFIKGMPFVSTESVWGALLHG 720
            +VD+  +   ++ A    + M   +  S W A+L G
Sbjct: 310 ALVDMYCKCKSIKYAESVFRKMARKNVVS-WTAMLVG 345


>ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g52630-like [Cucumis sativus]
          Length = 598

 Score =  288 bits (736), Expect = 2e-75
 Identities = 141/297 (47%), Positives = 198/297 (66%)
 Frame = +1

Query: 1    ALVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRP 180
            +LVDMYAKC  + DAR +FDEMPERNVV+WSG+I GYA      EA  +F + L + +  
Sbjct: 166  SLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDV 225

Query: 181  NDFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVF 360
            NDFTFS V   C++   L+ G+  H LCL+   +    VGS+LIS+YSKCG +E   +VF
Sbjct: 226  NDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVF 285

Query: 361  EGMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVD 540
            + +  R+L +WN+M+    QH H      LFE +   G+ P+ +SFL VL AC+HAG V+
Sbjct: 286  DEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVE 345

Query: 541  EGLGYFEEMKRVYGIRPRLEHHACIVDVLARGGRLEEAYEFIKGMPFVSTESVWGALLHG 720
            +G  YF  M R YGI P  EH+A +VD+L R G+L+EA   IK MP   TESVWGALL G
Sbjct: 346  KGREYFSLM-RDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTG 404

Query: 721  CRMHENVELGEIAAHKLFELNPSCSGTYTLLANLYASVGRWEDFARLKRMMRERGIR 891
            CR+H++ E+    A ++ E++ S SG + LL+N YA+ GR+E+ AR+++M+R+RG++
Sbjct: 405  CRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVK 461



 Score =  126 bits (317), Expect = 9e-27
 Identities = 68/253 (26%), Positives = 130/253 (51%), Gaps = 6/253 (2%)
 Frame = +1

Query: 4   LVDMYAKCKHVKDARMVFDEMPERNVVTWSGLICGYALNGLDEEAFRVFYEGLNDGLRPN 183
           L+++Y+K +    +  VFDE P+++  TWS +I  +A N     A + F   LNDG+RP+
Sbjct: 66  LINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPD 125

Query: 184 DFTFSMVFSGCANMAALDQGRQAHALCLQCGINDYILVGSSLISMYSKCGCLEDGTRVFE 363
           D  +      C  +   D G+  H L ++ G    + VGSSL+ MY+KCG + D   +F+
Sbjct: 126 DHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFD 185

Query: 364 GMSHRSLQMWNAMVFGFGQHGHGHEAIRLFESIKRQGLVPDEVSFLCVLSACNHAGFVDE 543
            M  R++  W+ M++G+ Q   G EA+ LF+    + +  ++ +F  V+  C+ + F++ 
Sbjct: 186 EMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLEL 245

Query: 544 GLGYFEEMKRVYGIRPRLEHH------ACIVDVLARGGRLEEAYEFIKGMPFVSTESVWG 705
           G       K ++G+  ++         + ++ + ++ G +E AY+    +P      +W 
Sbjct: 246 G-------KLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIP-TRNLGLWN 297

Query: 706 ALLHGCRMHENVE 744
           ++L  C  H + +
Sbjct: 298 SMLIACAQHAHTQ 310