BLASTX nr result

ID: Ephedra25_contig00023709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00023709
         (891 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006844676.1| hypothetical protein AMTR_s00016p00243400 [A...    72   3e-10

>ref|XP_006844676.1| hypothetical protein AMTR_s00016p00243400 [Amborella trichopoda]
           gi|548847147|gb|ERN06351.1| hypothetical protein
           AMTR_s00016p00243400 [Amborella trichopoda]
          Length = 172

 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 3/178 (1%)
 Frame = -1

Query: 732 LRVEASTFMRHMWIVVRSMMREGSSNLKDTAEAMKTKLLVLGFIKNRNLV-GAVTNKLNY 556
           ++  ASTF++ M  V+ S+++  SS++K  AEA+KT+L+V G ++N   V   +++K+++
Sbjct: 1   MKNRASTFLKQMLSVIGSLVKAKSSSVKHKAEAIKTRLIVFGLLRNNKKVFTTISHKIHH 60

Query: 555 HKSQLSGKFKLXXXXXXXXXXXXXXXXXKEIVEFCGQQDDNVYVESPN--FSPTLTPTIT 382
              Q   + K                       F   ++D  Y +  +  F    T    
Sbjct: 61  LLGQDDDQCKAIVVYNSMALEPTSELC------FNKPEEDEEYPDLTHSLFDSEDTELEN 114

Query: 381 PGISPCLSFKSHGTPDVSIKSDQDIDKIASAFIKGFHNKLKMQKQDSYKTFQAMLERS 208
           PG S  +            K + +ID +A  FIK FH +++MQKQ S+K ++ ML RS
Sbjct: 115 PGQS-AIDLVKQSVNTADFKLEDEIDHVADLFIKRFHKRIEMQKQQSFKRYEEMLNRS 171


Top