BLASTX nr result

ID: Ephedra25_contig00023706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00023706
         (533 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30028.3| unnamed protein product [Vitis vinifera]               66   4e-09
ref|XP_002279026.1| PREDICTED: non-structural maintenance of chr...    64   2e-08
ref|XP_006838288.1| hypothetical protein AMTR_s00103p00104910 [A...    63   4e-08
ref|XP_002437292.1| hypothetical protein SORBIDRAFT_10g024320 [S...    56   4e-06
ref|XP_002885402.1| hypothetical protein ARALYDRAFT_342232 [Arab...    55   1e-05

>emb|CBI30028.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 38/83 (45%), Positives = 55/83 (66%)
 Frame = +3

Query: 285 PKSNIEVGQSSIQGRIKKEKVSSKPPLPNASTTDSSFNQSVAQRRILRSRYHALKASIAE 464
           PK   EV Q+++   +K+E  SS     N +  D+S +Q V +RR+LRSRY A+K  I +
Sbjct: 63  PKKFKEV-QNAMVRAVKREVGSSSRANANEAGADNSGHQGVTERRVLRSRYLAVKNQICD 121

Query: 465 DREGLLKVDSDKFQSIISKAENL 533
            RE + KVDSDKF+SII++ E+L
Sbjct: 122 GREDITKVDSDKFKSIINEVESL 144


>ref|XP_002279026.1| PREDICTED: non-structural maintenance of chromosome element 4
           [Vitis vinifera]
          Length = 380

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 33/68 (48%), Positives = 47/68 (69%)
 Frame = +3

Query: 330 IKKEKVSSKPPLPNASTTDSSFNQSVAQRRILRSRYHALKASIAEDREGLLKVDSDKFQS 509
           +K+E  SS     N +  D+S +Q V +RR+LRSRY A+K  I + RE + KVDSDKF+S
Sbjct: 5   VKREVGSSSRANANEAGADNSGHQGVTERRVLRSRYLAVKNQICDGREDITKVDSDKFKS 64

Query: 510 IISKAENL 533
           II++ E+L
Sbjct: 65  IINEVESL 72


>ref|XP_006838288.1| hypothetical protein AMTR_s00103p00104910 [Amborella trichopoda]
           gi|548840756|gb|ERN00857.1| hypothetical protein
           AMTR_s00103p00104910 [Amborella trichopoda]
          Length = 385

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 34/71 (47%), Positives = 50/71 (70%), Gaps = 3/71 (4%)
 Frame = +3

Query: 330 IKKEK---VSSKPPLPNASTTDSSFNQSVAQRRILRSRYHALKASIAEDREGLLKVDSDK 500
           +KKEK    +SK P   A+ TD+  NQS  +RR+LRSRY A+K  I ++R+ +  +DSDK
Sbjct: 2   VKKEKHQASTSKEPSSKATHTDTQGNQSTTERRVLRSRYLAVKNLINDERDEITCLDSDK 61

Query: 501 FQSIISKAENL 533
           F++IIS+ E+L
Sbjct: 62  FKTIISEVESL 72


>ref|XP_002437292.1| hypothetical protein SORBIDRAFT_10g024320 [Sorghum bicolor]
           gi|241915515|gb|EER88659.1| hypothetical protein
           SORBIDRAFT_10g024320 [Sorghum bicolor]
          Length = 417

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/59 (47%), Positives = 42/59 (71%)
 Frame = +3

Query: 357 PPLPNASTTDSSFNQSVAQRRILRSRYHALKASIAEDREGLLKVDSDKFQSIISKAENL 533
           PP P A   + +  Q+V  RR+LRS+YHA+K  I+++++ +  VDSDKF SII+K E+L
Sbjct: 16  PPPPPAQQAEET--QAVDDRRMLRSQYHAVKGLISDEKDDMASVDSDKFCSIINKVESL 72


>ref|XP_002885402.1| hypothetical protein ARALYDRAFT_342232 [Arabidopsis lyrata subsp.
           lyrata] gi|297331242|gb|EFH61661.1| hypothetical protein
           ARALYDRAFT_342232 [Arabidopsis lyrata subsp. lyrata]
          Length = 395

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
 Frame = +3

Query: 291 SNIEVGQSSIQGRIKKEKVSSKPPL----PNASTTDSSFNQSVAQRRILRSRYHALKASI 458
           S  E G+SS + +I K++  SK  +    P          Q +A RR +RS+Y AL   I
Sbjct: 17  SRREAGESSERPKIVKKEKQSKTVIASLRPQEPPIQEEDEQGIADRRAIRSQYLALTHQI 76

Query: 459 AEDREGLLKVDSDKFQSIISKAENL 533
            + ++ L K+DSDKF+ II++ ENL
Sbjct: 77  KDAKDDLTKIDSDKFKRIINEVENL 101


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