BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00023697
         (888 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002977444.1| hypothetical protein SELMODRAFT_417492 [Sela...    87   3e-15
ref|XP_002975204.1| hypothetical protein SELMODRAFT_442740 [Sela...    87   8e-15
ref|XP_001770889.1| predicted protein [Physcomitrella patens] gi...    81   6e-13
ref|XP_002524216.1| zinc finger protein, putative [Ricinus commu...    76   2e-11
ref|XP_006435620.1| hypothetical protein CICLE_v10031537mg [Citr...    72   3e-10
ref|XP_006486408.1| PREDICTED: poly(A) RNA polymerase GLD2-like ...    71   6e-10
ref|XP_002879814.1| hypothetical protein ARALYDRAFT_321659 [Arab...    68   4e-09
gb|ESW35455.1| hypothetical protein PHAVU_001G236100g [Phaseolus...    67   7e-09
ref|XP_006296116.1| hypothetical protein CARUB_v10025267mg [Caps...    67   7e-09
ref|NP_001062505.1| Os08g0559900 [Oryza sativa Japonica Group] g...    67   7e-09
gb|EEE69151.1| hypothetical protein OsJ_28282 [Oryza sativa Japo...    67   7e-09
gb|EEC84035.1| hypothetical protein OsI_30272 [Oryza sativa Indi...    67   7e-09
ref|XP_006846360.1| hypothetical protein AMTR_s00012p00261420 [A...    67   9e-09
ref|XP_004307469.1| PREDICTED: poly(A) RNA polymerase, mitochond...    67   1e-08
ref|XP_004307468.1| PREDICTED: poly(A) RNA polymerase GLD2-like ...    66   2e-08
ref|XP_006601987.1| PREDICTED: poly(A) RNA polymerase cid11-like...    65   3e-08
ref|XP_004503175.1| PREDICTED: poly(A) RNA polymerase GLD2-like ...    65   3e-08
ref|XP_006601982.1| PREDICTED: poly(A) RNA polymerase cid11-like...    65   3e-08
dbj|BAE99845.1| hypothetical protein [Arabidopsis thaliana]            65   3e-08
ref|NP_181504.2| HEN1 suppressor 1 [Arabidopsis thaliana] gi|538...    65   3e-08

>ref|XP_002977444.1| hypothetical protein SELMODRAFT_417492 [Selaginella moellendorffii]
           gi|300154814|gb|EFJ21448.1| hypothetical protein
           SELMODRAFT_417492 [Selaginella moellendorffii]
          Length = 479

 Score = 87.4 bits (215), Expect(2) = 3e-15
 Identities = 54/166 (32%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
 Frame = -2

Query: 866 KVREFISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKW---VHIEHTQI 696
           ++ EF    +G+ N SSV ELFVSFF Q++   E+W QGLA+C F G+W      + +  
Sbjct: 227 RIAEFTERGFGKGNTSSVAELFVSFFGQFSAVEELWIQGLAVCTFRGQWGDKTTTDPSWA 286

Query: 695 HKNYSMVIVDPIDHRENCARTVSSKALERLYHALRETSETLQKPPGSISIDSLRNFLF-- 522
            KNY+M++ DP D  ENCAR+V   +L+ +  A R + E L        +  L+  LF  
Sbjct: 287 SKNYAMLVEDPFDLSENCARSVHQGSLQHVCKAFRLSHELLCDKFSYWFLGKLKETLFRW 346

Query: 521 --------------GCSQSREGQRTNQA-SSKKPQRYQNKKNHVEE 429
                         G  Q RE    N +  + +P++ +  K  V +
Sbjct: 347 PHASPRPCFHPSRPGIEQLREHASLNASRKNDRPEKQKKGKKQVRQ 392



 Score = 21.6 bits (44), Expect(2) = 3e-15
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 393 SSGNTW*Q*SKQTKLYP 343
           SS   W +  K+TKLYP
Sbjct: 415 SSEEVWIRKQKRTKLYP 431


>ref|XP_002975204.1| hypothetical protein SELMODRAFT_442740 [Selaginella moellendorffii]
           gi|300157363|gb|EFJ23989.1| hypothetical protein
           SELMODRAFT_442740 [Selaginella moellendorffii]
          Length = 373

 Score = 87.0 bits (214), Expect = 8e-15
 Identities = 54/170 (31%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
 Frame = -2

Query: 878 HCTIKVREFISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKW---VHIE 708
           H   ++ EF    +G+ N SSV ELFVSFF Q++   E+W QGLA+C F G+W      +
Sbjct: 204 HYLNRIAEFTERGFGKGNTSSVAELFVSFFGQFSAVEELWIQGLAVCTFRGQWGDKTTTD 263

Query: 707 HTQIHKNYSMVIVDPIDHRENCARTVSSKALERLYHALRETSETLQKPPGSISIDSLRNF 528
                KNY++++ DP D  ENC+R+V   +L+ +  A R T E L        +  L+  
Sbjct: 264 PAWASKNYALLVEDPFDLSENCSRSVHQGSLQHVCKAFRLTHELLCDKFSYWFLGKLKET 323

Query: 527 LF----------------GCSQSREGQRTNQA-SSKKPQRYQNKKNHVEE 429
           LF                G  Q RE    N +  + +P++ +  K  V++
Sbjct: 324 LFRWPHASPRPCFHPSRPGIEQLREHVSLNASRKNDRPEKQKKGKKQVKQ 373


>ref|XP_001770889.1| predicted protein [Physcomitrella patens] gi|162677753|gb|EDQ64219.1|
            predicted protein [Physcomitrella patens]
          Length = 1171

 Score = 80.9 bits (198), Expect = 6e-13
 Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
 Frame = -2

Query: 884  LHHCTIKVREFISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIEH 705
            +  C  +++  +S+ +G+ N+ S+ +LF+SFF Q+A    +W  GLA+  F G+W     
Sbjct: 665  MQECYGRIQALVSEGFGQDNKCSIGQLFLSFFGQFASVKSLWVNGLAVSPFWGEWGDSTT 724

Query: 704  TQ---IHKNYSMVIVDPIDHRENCARTVSSKALERLYHALRETSETLQKPPGSISIDSLR 534
            T      K Y+M + DP D  +NCAR++    L  + ++     E+L +PP    + SLR
Sbjct: 725  TNPAWNRKQYAMRVEDPFDRMDNCARSIQDAGLPIICNSFAAAFESLLQPPDWDQLLSLR 784

Query: 533  NFLF 522
              LF
Sbjct: 785  QLLF 788


>ref|XP_002524216.1| zinc finger protein, putative [Ricinus communis]
           gi|223536493|gb|EEF38140.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 493

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 66/269 (24%), Positives = 114/269 (42%), Gaps = 28/269 (10%)
 Frame = -2

Query: 875 CTIKVREFISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIEHTQ- 699
           C   +  ++SD+Y   N+SS+ ELF+SFF +++  + + +  L +C FTG+W+ I  T  
Sbjct: 230 CNANIARYMSDKYRAVNRSSLSELFISFFAKFS-GISLKAADLGICTFTGQWLDIRSTMR 288

Query: 698 -IHKNYSMVIVDPIDHRENCARTVSSKALERLYHALRETSETL---QKPPGSISIDSLRN 531
            + K Y++ I DP +  EN AR VS+  L ++  A + T   L    +   S+    +R 
Sbjct: 289 WLPKTYALFIEDPFEQPENAARAVSAGNLVKIAEAFQTTYHKLVLANQNRTSLLGTLVRP 348

Query: 530 FLFGCSQSREGQRTNQASSKKPQRYQNKKNHVEEMMANRGQGQQNYLQEILGNNNQSKQN 351
            +  C      +  +  S      YQ+    + + M +  Q Q  +           +Q 
Sbjct: 349 EILNCIAGTPVRNLSYTS----LHYQSTHPQISKSMYSSPQVQHQF--------QNMRQE 396

Query: 350 YIQETITERMEHVAPRVFSEPYFLPLQRPLKQETF--NTNHNSSPEES-IQQH--YFYRP 186
             Q+  T + +   P   +  Y +   R  K  ++     H S PE + +++H  YF   
Sbjct: 397 KHQKIFTAQRQEKHPHSSNSQYRVQNTRLEKHPSYLAKQGHESHPENTRLERHPNYFAMQ 456

Query: 185 KQ------------------HGHPIWRPK 153
           KQ                   G  +WRPK
Sbjct: 457 KQESNVNTSTRKKPAQYYHGQGQQLWRPK 485


>ref|XP_006435620.1| hypothetical protein CICLE_v10031537mg [Citrus clementina]
           gi|557537816|gb|ESR48860.1| hypothetical protein
           CICLE_v10031537mg [Citrus clementina]
          Length = 445

 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 9/169 (5%)
 Frame = -2

Query: 875 CTIKVREFISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIEHTQ- 699
           C   +  F SD+Y + N+SS+  LFVSF  +++  + + S  L +C FTG+W HI     
Sbjct: 230 CAFNIARFSSDKYRKINRSSLAHLFVSFLEKFS-GLSLKSSELGICPFTGQWEHIRSNTR 288

Query: 698 -IHKNYSMVIVDPIDHRENCARTVSSKALERLYHA-------LRETSETLQKPPGSISID 543
            +  N+ + I DP +  EN AR VS K L ++ +A       L  T++T      S++  
Sbjct: 289 WLPNNHPLFIEDPFEQPENSARAVSEKNLAKISNAFEMTHFRLTSTNQTRYALLSSLARP 348

Query: 542 SLRNFLFGCSQSREGQRTNQASSKKPQRYQNKKNHVEEMMANRGQGQQN 396
            +  F FG S  R     N     +PQ +++  + ++    +    ++N
Sbjct: 349 YILQF-FGESPVRYANYNNGHRRARPQSHKSVNSPLQAQHQSHNARREN 396


>ref|XP_006486408.1| PREDICTED: poly(A) RNA polymerase GLD2-like isoform X1 [Citrus
           sinensis] gi|568866114|ref|XP_006486409.1| PREDICTED:
           poly(A) RNA polymerase GLD2-like isoform X2 [Citrus
           sinensis]
          Length = 445

 Score = 70.9 bits (172), Expect = 6e-10
 Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 9/169 (5%)
 Frame = -2

Query: 875 CTIKVREFISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIEHTQ- 699
           C   +  F SD+Y + N+SS+  LFVSF  +++  + + +  L +C FTG+W HI     
Sbjct: 230 CAFNIARFSSDKYRKINRSSLAHLFVSFLEKFS-GLSLKASELGICPFTGQWEHIRSNTR 288

Query: 698 -IHKNYSMVIVDPIDHRENCARTVSSKALERLYHA-------LRETSETLQKPPGSISID 543
            +  N+ + I DP +  EN AR VS K L ++ +A       L  T++T      S++  
Sbjct: 289 WLPNNHPLFIEDPFEQPENSARAVSEKNLAKISNAFEMTHFRLTSTNQTRYALLSSLARP 348

Query: 542 SLRNFLFGCSQSREGQRTNQASSKKPQRYQNKKNHVEEMMANRGQGQQN 396
            +  F FG S  R     N     +PQ +++  + ++    +    ++N
Sbjct: 349 YILQF-FGESPVRYANYNNGHRRARPQSHKSVNSPLQAQHQSHNARREN 396


>ref|XP_002879814.1| hypothetical protein ARALYDRAFT_321659 [Arabidopsis lyrata subsp.
            lyrata] gi|297325653|gb|EFH56073.1| hypothetical protein
            ARALYDRAFT_321659 [Arabidopsis lyrata subsp. lyrata]
          Length = 500

 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 65/263 (24%), Positives = 111/263 (42%), Gaps = 35/263 (13%)
 Frame = -2

Query: 827  NQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIEH--TQIHKNYSMVIVDPIDH 654
            N+SS+ EL VSF+ +++  + + +Q L +C FTG+W +I    T + K YS+ + DP + 
Sbjct: 246  NRSSLSELLVSFYAKFSD-INLKAQELGVCPFTGRWENISSNTTWLPKTYSLFVEDPFEQ 304

Query: 653  RENCARTVSSKALERLYHALRETSETLQKPPGSISIDSLRNFLFGCSQSREGQRT-NQAS 477
              N AR+VS + L+R+    + TS  L         D  RN + G    +  Q + ++  
Sbjct: 305  PVNAARSVSRRNLDRIAQVFQITSRRLVS-------DCNRNSIIGVLTGQHIQESLHRTI 357

Query: 476  SKKPQRYQNKKNHVEEMMA----NRGQGQQNYLQEILGNN---------NQSKQNYIQET 336
            S   Q++ N  ++V  +         Q QQN+ Q     N         ++ +QN+ Q  
Sbjct: 358  SLHSQQHANSMHNVRNLHGQARHQNQQMQQNWSQSYNTQNPPYWPPPTQSRPQQNWPQNN 417

Query: 335  ITERMEHVAPRVFSEPYFLPLQRPLKQETFNTNH---NSSPEESIQQHYFYRPKQH---- 177
            +         +  + P     Q   K +  N N    N+S   S  Q +  +P  H    
Sbjct: 418  LRNLQGQPPVQGRTWPVITQTQTQQKSQYKNGNRSLKNTSAGSSQNQGHIGKPSGHMNGV 477

Query: 176  ------------GHPIWRPKQRE 144
                        G  +WRP+  +
Sbjct: 478  NSARPASKIPSQGGQMWRPRHEQ 500


>gb|ESW35455.1| hypothetical protein PHAVU_001G236100g [Phaseolus vulgaris]
          Length = 509

 Score = 67.4 bits (163), Expect = 7e-09
 Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
 Frame = -2

Query: 887 ILHHCTIKVREFISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIE 708
           I   C   +   IS+     N+ SVP+LFV F  +YA+ M+ W+  L +C +TG+W  IE
Sbjct: 226 IAETCNAGINRHISNTARSINKKSVPDLFVEFLRKYAQ-MDSWASELGICPYTGQWEQIE 284

Query: 707 HTQI--HKNYSMVIVDPIDHRENCARTVSSKALERLYHALRET 585
           +  I   K YS+ + DP +  +N AR+V++  L+++     +T
Sbjct: 285 NNTIWLPKTYSIFVEDPFEQPQNTARSVNAGQLKKISDTFSKT 327


>ref|XP_006296116.1| hypothetical protein CARUB_v10025267mg [Capsella rubella]
           gi|482564824|gb|EOA29014.1| hypothetical protein
           CARUB_v10025267mg [Capsella rubella]
          Length = 499

 Score = 67.4 bits (163), Expect = 7e-09
 Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 3/213 (1%)
 Frame = -2

Query: 863 VREFISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIEHTQ--IHK 690
           +  F  D     N+SS+ EL VSFF +++  + + +Q L +C FTG+W +I      + K
Sbjct: 233 IARFKLDTAKSPNRSSLSELLVSFFAKFSD-INVKAQELGVCPFTGRWENISSNSRWLPK 291

Query: 689 NYSMVIVDPIDHRENCARTVSSKALERLYHALRETSETLQKPPGSISIDSLRNFLFGCSQ 510
            YS+ + DP +  +N AR+VS + L+R+    + TS  L       + D  RN + G   
Sbjct: 292 TYSLFVEDPFEQPQNAARSVSRRNLDRIAQVFQMTSRRL-------ASDCNRNSIIGVMT 344

Query: 509 SREGQRT-NQASSKKPQRYQNKKNHVEEMMANRGQGQQNYLQEILGNNNQSKQNYIQETI 333
            ++ Q++  +  S   Q + N  ++V  +    GQ +          N Q +QN+ Q   
Sbjct: 345 GQQIQQSLYRTISLHNQHHANGTHNVRNL---HGQSRP--------WNQQLQQNWSQSYN 393

Query: 332 TERMEHVAPRVFSEPYFLPLQRPLKQETFNTNH 234
           T           + PY+ PL +   Q+++  N+
Sbjct: 394 TP----------NPPYWPPLTQSRPQQSWYQNN 416


>ref|NP_001062505.1| Os08g0559900 [Oryza sativa Japonica Group]
           gi|45736111|dbj|BAD13142.1| unknown protein [Oryza
           sativa Japonica Group] gi|45736157|dbj|BAD13203.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|113624474|dbj|BAF24419.1| Os08g0559900 [Oryza sativa
           Japonica Group]
          Length = 581

 Score = 67.4 bits (163), Expect = 7e-09
 Identities = 60/227 (26%), Positives = 97/227 (42%), Gaps = 4/227 (1%)
 Frame = -2

Query: 839 YGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIEHTQIHKNYSMVIVDPI 660
           +G +N+ SV ELFVS  ++      +W QGL    F G W+     +   N S  + D +
Sbjct: 285 FGSRNKESVAELFVSLMSKLLSVEGLWEQGLCASNFEGSWIFKTWERGVGNLS--VEDFL 342

Query: 659 DHRENCARTVSSKALERLYHALRETSETLQK-PPGSISIDSLRNFLFGCSQSREGQRTNQ 483
           D  +N AR V  + ++++   +R     L     G I    L+N LF      + +  + 
Sbjct: 343 DRSQNFARAVGKEEMQKISECIRVAVLNLNNFFRGKIDAPKLKNLLF--EPPHQDELISN 400

Query: 482 ASSKKPQRYQNKKNHVEEMMANRGQGQQNYLQEILG-NNNQSKQNYIQETIT--ERMEHV 312
            S K+P+R    K+H      +  Q QQ   + I+G  +NQ +Q  ++ T+         
Sbjct: 401 PSLKRPKR----KDHPTHGPESNPQ-QQKKAKHIIGPESNQKQQKKVKHTVNPGPAASRS 455

Query: 311 APRVFSEPYFLPLQRPLKQETFNTNHNSSPEESIQQHYFYRPKQHGH 171
           A  +     F+P  RP+ Q     +H   P       Y   P+QH H
Sbjct: 456 ATNLHRPTAFVPQIRPI-QPINQVSHIPQPLVDPMFAYGLPPQQHLH 501


>gb|EEE69151.1| hypothetical protein OsJ_28282 [Oryza sativa Japonica Group]
          Length = 609

 Score = 67.4 bits (163), Expect = 7e-09
 Identities = 60/227 (26%), Positives = 97/227 (42%), Gaps = 4/227 (1%)
 Frame = -2

Query: 839 YGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIEHTQIHKNYSMVIVDPI 660
           +G +N+ SV ELFVS  ++      +W QGL    F G W+     +   N S  + D +
Sbjct: 284 FGSRNKESVAELFVSLMSKLLSVEGLWEQGLCASNFEGSWIFKTWERGVGNLS--VEDFL 341

Query: 659 DHRENCARTVSSKALERLYHALRETSETLQK-PPGSISIDSLRNFLFGCSQSREGQRTNQ 483
           D  +N AR V  + ++++   +R     L     G I    L+N LF      + +  + 
Sbjct: 342 DRSQNFARAVGKEEMQKISECIRVAVLNLNNFFRGKIDAPKLKNLLF--EPPHQDELISN 399

Query: 482 ASSKKPQRYQNKKNHVEEMMANRGQGQQNYLQEILG-NNNQSKQNYIQETIT--ERMEHV 312
            S K+P+R    K+H      +  Q QQ   + I+G  +NQ +Q  ++ T+         
Sbjct: 400 PSLKRPKR----KDHPTHGPESNPQ-QQKKAKHIIGPESNQKQQKKVKHTVNPGPAASRS 454

Query: 311 APRVFSEPYFLPLQRPLKQETFNTNHNSSPEESIQQHYFYRPKQHGH 171
           A  +     F+P  RP+ Q     +H   P       Y   P+QH H
Sbjct: 455 ATNLHRPTAFVPQIRPI-QPINQVSHIPQPLVDPMFAYGLPPQQHLH 500


>gb|EEC84035.1| hypothetical protein OsI_30272 [Oryza sativa Indica Group]
          Length = 580

 Score = 67.4 bits (163), Expect = 7e-09
 Identities = 60/227 (26%), Positives = 97/227 (42%), Gaps = 4/227 (1%)
 Frame = -2

Query: 839 YGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIEHTQIHKNYSMVIVDPI 660
           +G +N+ SV ELFVS  ++      +W QGL    F G W+     +   N S  + D +
Sbjct: 284 FGSRNKESVAELFVSLMSKLLSVEGLWEQGLCASNFEGSWIFKTWERGVGNLS--VEDFL 341

Query: 659 DHRENCARTVSSKALERLYHALRETSETLQK-PPGSISIDSLRNFLFGCSQSREGQRTNQ 483
           D  +N AR V  + ++++   +R     L     G I    L+N LF      + +  + 
Sbjct: 342 DRSQNFARAVGKEEMQKISECIRVAVLNLNNFFRGKIDAPKLKNLLF--EPPHQDELISN 399

Query: 482 ASSKKPQRYQNKKNHVEEMMANRGQGQQNYLQEILG-NNNQSKQNYIQETIT--ERMEHV 312
            S K+P+R    K+H      +  Q QQ   + I+G  +NQ +Q  ++ T+         
Sbjct: 400 PSLKRPKR----KDHPTHGPESNPQ-QQKKAKHIIGPESNQKQQKKVKHTVNPGPAASRS 454

Query: 311 APRVFSEPYFLPLQRPLKQETFNTNHNSSPEESIQQHYFYRPKQHGH 171
           A  +     F+P  RP+ Q     +H   P       Y   P+QH H
Sbjct: 455 ATNLHRPTAFVPQIRPI-QPINQVSHIPQPLVDPMFAYGLPPQQHLH 500


>ref|XP_006846360.1| hypothetical protein AMTR_s00012p00261420 [Amborella trichopoda]
           gi|548849130|gb|ERN08035.1| hypothetical protein
           AMTR_s00012p00261420 [Amborella trichopoda]
          Length = 520

 Score = 67.0 bits (162), Expect = 9e-09
 Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
 Frame = -2

Query: 887 ILHHCTIKVREFISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHI- 711
           I H C  K+    +  + + N+SS+ ELFVSFF ++       SQ  A+C FTG+W ++ 
Sbjct: 229 IEHSCNEKIDRLRAQGFNQANKSSLAELFVSFFEKFTDIGTRSSQQ-AICTFTGRWENLY 287

Query: 710 -EHTQIHKNYSMVIVDPIDHRENCARTVSSKALERLYHALRETSETLQKP 564
            +     K+Y +VI DP +   NCAR+V +  L R+  A   T   L+ P
Sbjct: 288 SKRDWTKKSYPLVIEDPFEQPTNCARSVRAFELLRISDAFNNTRGDLRSP 337


>ref|XP_004307469.1| PREDICTED: poly(A) RNA polymerase, mitochondrial-like [Fragaria
           vesca subsp. vesca]
          Length = 459

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 55/224 (24%), Positives = 93/224 (41%), Gaps = 3/224 (1%)
 Frame = -2

Query: 875 CTIKVREFISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIEH--T 702
           C   V  F SD++G  N SS+ +LF+SF  +++  + + ++   +C +TG+W  I    T
Sbjct: 230 CVANVTRFKSDKFGAVNTSSLSQLFISFLEKFSDLV-LKTRKSGICPYTGQWEDIASNMT 288

Query: 701 QIHKNYSMVIVDPIDHRENCARTVSSKALERLYHALRETSETLQKPPGSISIDSL-RNFL 525
            + + Y+++I DP D  ENC+R VS   L ++  A + +S  L     S  + +L R   
Sbjct: 289 WLPQTYTIMIEDPFDQPENCSRAVSMGELTKISEACKMSSHILMSANQSDILATLVRPLT 348

Query: 524 FGCSQSREGQRTNQASSKKPQRYQNKKNHVEEMMANRGQGQQNYLQEILGNNNQSKQNYI 345
           +               +  PQR+  +  H      N  +                 Q + 
Sbjct: 349 YRLVAGTPHYPFEHHHTAYPQRFMTESPHSRTPRGNYARQPHRPQVHKWAQKPSQVQPHF 408

Query: 344 QETITERMEHVAPRVFSEPYFLPLQRPLKQETFNTNHNSSPEES 213
           Q+   E+  H     F E       +P      +TN NS+ E S
Sbjct: 409 QKMEPEK--HPDKSTFQE------MKPENHPNRSTNENSTLETS 444


>ref|XP_004307468.1| PREDICTED: poly(A) RNA polymerase GLD2-like [Fragaria vesca subsp.
           vesca]
          Length = 549

 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 3/207 (1%)
 Frame = -2

Query: 875 CTIKVREFISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIEHTQ- 699
           C   +R F +     +N+SS+ ELF+SF  +++  +   +  L +C ++GKW  IE    
Sbjct: 224 CVENIRRFKASRLRAQNKSSLSELFISFLRKFS-GLSSKAAELGICTYSGKWEAIESNMG 282

Query: 698 -IHKNYSMVIVDPIDHRENCARTVSSKALERLYHALRETSETLQKPPGSISIDSLRNFLF 522
            + K Y +++ DP D  EN AR VS +AL R+      + + L     S S+    + L 
Sbjct: 283 WLPKTYCILVEDPFDRPENTARGVSLRALNRISGVFEMSRDRLIAASYSSSLAIESSLL- 341

Query: 521 GCSQSREGQRTNQASSKKPQRYQN-KKNHVEEMMANRGQGQQNYLQEILGNNNQSKQNYI 345
             +     Q  N          +N +  H + +MA     +           N   + Y+
Sbjct: 342 --TTLVRPQTLNHIMRNLGYNIENHQTTHPQHIMAESSHSRTTRHYNGPPKPNGPYRPYV 399

Query: 344 QETITERMEHVAPRVFSEPYFLPLQRP 264
            E +  R  H  P+    PY   L+ P
Sbjct: 400 PELVPPRDYHNRPQKLKGPYVPVLESP 426


>ref|XP_006601987.1| PREDICTED: poly(A) RNA polymerase cid11-like isoform X6 [Glycine
           max]
          Length = 374

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
 Frame = -2

Query: 887 ILHHCTIKVREFISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIE 708
           I   C   +  FIS+     N+ SV ELFV F  ++AK M+  +  + +C ++GKW  IE
Sbjct: 185 IAQTCDANINRFISNRARSINRKSVAELFVEFIGKFAK-MDSMAVKMGICPYSGKWEQIE 243

Query: 707 HTQI--HKNYSMVIVDPIDHRENCARTVSSKALERLYHALRETSETL 573
              I   K Y++ + DP +  +N AR+VS+  L+++  A   T + L
Sbjct: 244 DNMIWLPKTYAIFVEDPFEQPQNTARSVSAGQLKKITEAFARTHDLL 290


>ref|XP_004503175.1| PREDICTED: poly(A) RNA polymerase GLD2-like [Cicer arietinum]
          Length = 491

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 34/103 (33%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
 Frame = -2

Query: 875 CTIKVREFISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIEHTQ- 699
           C   +  FISD+    N+ SVPELF+ F  ++A+ M+ W+  L +C ++G+   I++   
Sbjct: 230 CGANINRFISDKSRTINRKSVPELFIDFLRKFAQ-MDSWASELGICPYSGQREQIKNNMR 288

Query: 698 -IHKNYSMVIVDPIDHRENCARTVSSKALERLYHALRETSETL 573
            + K Y++ + DP +  EN AR+VS+  L ++  A  +T   L
Sbjct: 289 WLPKTYAIFVEDPFEQPENSARSVSAGQLRKIAEAFLKTYSLL 331


>ref|XP_006601982.1| PREDICTED: poly(A) RNA polymerase cid11-like isoform X1 [Glycine
           max] gi|571542766|ref|XP_006601983.1| PREDICTED: poly(A)
           RNA polymerase cid11-like isoform X2 [Glycine max]
           gi|571542770|ref|XP_006601984.1| PREDICTED: poly(A) RNA
           polymerase cid11-like isoform X3 [Glycine max]
           gi|571542774|ref|XP_006601985.1| PREDICTED: poly(A) RNA
           polymerase cid11-like isoform X4 [Glycine max]
          Length = 415

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
 Frame = -2

Query: 887 ILHHCTIKVREFISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIE 708
           I   C   +  FIS+     N+ SV ELFV F  ++AK M+  +  + +C ++GKW  IE
Sbjct: 226 IAQTCDANINRFISNRARSINRKSVAELFVEFIGKFAK-MDSMAVKMGICPYSGKWEQIE 284

Query: 707 HTQI--HKNYSMVIVDPIDHRENCARTVSSKALERLYHALRETSETL 573
              I   K Y++ + DP +  +N AR+VS+  L+++  A   T + L
Sbjct: 285 DNMIWLPKTYAIFVEDPFEQPQNTARSVSAGQLKKITEAFARTHDLL 331


>dbj|BAE99845.1| hypothetical protein [Arabidopsis thaliana]
          Length = 511

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 2/194 (1%)
 Frame = -2

Query: 863 VREFISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIEH--TQIHK 690
           +  F S+     N+SS+ EL VSFF +++  + + +Q   +C FTG+W  I    T + K
Sbjct: 234 IARFKSERAKSVNRSSLSELLVSFFAKFSD-INVKAQEFGVCPFTGRWETISSNTTWLPK 292

Query: 689 NYSMVIVDPIDHRENCARTVSSKALERLYHALRETSETLQKPPGSISIDSLRNFLFGCSQ 510
            YS+ + DP +   N AR+VS + L+R+    + TS  L         +  RN + G   
Sbjct: 293 TYSLFVEDPFEQPVNAARSVSRRNLDRIAQVFQITSRRLVS-------ECNRNSIIGILT 345

Query: 509 SREGQRTNQASSKKPQRYQNKKNHVEEMMANRGQGQQNYLQEILGNNNQSKQNYIQETIT 330
            +  Q +   +   P ++           AN     +N   +    N Q +QN+ Q   T
Sbjct: 346 GQHIQESLYRTISLPSQHH----------ANGMHNVRNLHGQARPQNQQMQQNWSQSYNT 395

Query: 329 ERMEHVAPRVFSEP 288
               H  P   S P
Sbjct: 396 PNPPHWPPLTQSRP 409


>ref|NP_181504.2| HEN1 suppressor 1 [Arabidopsis thaliana] gi|53850481|gb|AAU95417.1|
           At2g39740 [Arabidopsis thaliana]
           gi|55733735|gb|AAV59264.1| At2g39740 [Arabidopsis
           thaliana] gi|330254623|gb|AEC09717.1| HEN1 suppressor 1
           [Arabidopsis thaliana]
          Length = 511

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 2/194 (1%)
 Frame = -2

Query: 863 VREFISDEYGRKNQSSVPELFVSFFNQYAKAMEIWSQGLAMCIFTGKWVHIEH--TQIHK 690
           +  F S+     N+SS+ EL VSFF +++  + + +Q   +C FTG+W  I    T + K
Sbjct: 234 IARFKSERAKSVNRSSLSELLVSFFAKFSD-INVKAQEFGVCPFTGRWETISSNTTWLPK 292

Query: 689 NYSMVIVDPIDHRENCARTVSSKALERLYHALRETSETLQKPPGSISIDSLRNFLFGCSQ 510
            YS+ + DP +   N AR+VS + L+R+    + TS  L         +  RN + G   
Sbjct: 293 TYSLFVEDPFEQPVNAARSVSRRNLDRIAQVFQITSRRLVS-------ECNRNSIIGILT 345

Query: 509 SREGQRTNQASSKKPQRYQNKKNHVEEMMANRGQGQQNYLQEILGNNNQSKQNYIQETIT 330
            +  Q +   +   P ++           AN     +N   +    N Q +QN+ Q   T
Sbjct: 346 GQHIQESLYRTISLPSQHH----------ANGMHNVRNLHGQARPQNQQMQQNWSQSYNT 395

Query: 329 ERMEHVAPRVFSEP 288
               H  P   S P
Sbjct: 396 PNPPHWPPLTQSRP 409