BLASTX nr result
ID: Ephedra25_contig00023593
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00023593
(519 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002515294.1| ATP binding protein, putative [Ricinus commu... 86 4e-15
gb|EXB28598.1| DNA mismatch repair protein Msh6-1 [Morus notabilis] 82 7e-14
gb|AAT67045.1| DNA mismatch repair protein [Petunia x hybrida] 80 2e-13
gb|EPS71963.1| hypothetical protein M569_02799, partial [Genlise... 79 5e-13
ref|XP_004229397.1| PREDICTED: DNA mismatch repair protein MSH6-... 77 2e-12
ref|XP_006349194.1| PREDICTED: DNA mismatch repair protein MSH6-... 75 9e-12
emb|CAN78918.1| hypothetical protein VITISV_032225 [Vitis vinifera] 74 3e-11
ref|XP_006661208.1| PREDICTED: DNA mismatch repair protein MSH6-... 73 5e-11
emb|CBI36942.3| unnamed protein product [Vitis vinifera] 73 5e-11
ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein Msh6-... 73 5e-11
ref|XP_004136154.1| PREDICTED: DNA mismatch repair protein MSH6-... 72 6e-11
ref|XP_006604739.1| PREDICTED: DNA mismatch repair protein MSH6-... 72 1e-10
ref|XP_002320307.2| DNA mismatch repair protein MSH6-1 [Populus ... 72 1e-10
ref|XP_002333974.1| predicted protein [Populus trichocarpa] 72 1e-10
ref|XP_003625965.1| DNA mismatch repair protein Msh6-1 [Medicago... 70 3e-10
ref|XP_006444483.1| hypothetical protein CICLE_v10018525mg [Citr... 70 4e-10
ref|XP_006841417.1| hypothetical protein AMTR_s00003p00029910 [A... 69 5e-10
ref|XP_004494416.1| PREDICTED: DNA mismatch repair protein MSH6-... 69 5e-10
ref|XP_006492326.1| PREDICTED: DNA mismatch repair protein MSH6-... 69 6e-10
ref|XP_006396405.1| hypothetical protein EUTSA_v10028364mg [Eutr... 69 6e-10
>ref|XP_002515294.1| ATP binding protein, putative [Ricinus communis]
gi|223545774|gb|EEF47278.1| ATP binding protein,
putative [Ricinus communis]
Length = 1306
Score = 86.3 bits (212), Expect = 4e-15
Identities = 48/104 (46%), Positives = 66/104 (63%)
Frame = -1
Query: 519 RLKVYWPMDEAYYVGCVHSYDEDSGMHSVLYDDGEFESLILANEKVQWIDAEESVKKTKF 340
R+KVYWP+D+ +Y GCV SYDEDSG H V YDD E E L L NEK++W+ EESV TKF
Sbjct: 111 RVKVYWPLDKTWYEGCVKSYDEDSGKHLVQYDDFEEEVLDLGNEKIEWV--EESV--TKF 166
Query: 339 RRLKKLSESQRESNFEEDKCLPTPQPETPSLEVSKRAEGSDSLD 208
+RL++ S + + + E+++ E E + +G DS D
Sbjct: 167 KRLRRGSLAFKNTVIEDEEMKDVADIE----EENACVDGDDSSD 206
>gb|EXB28598.1| DNA mismatch repair protein Msh6-1 [Morus notabilis]
Length = 1302
Score = 82.0 bits (201), Expect = 7e-14
Identities = 47/104 (45%), Positives = 67/104 (64%)
Frame = -1
Query: 519 RLKVYWPMDEAYYVGCVHSYDEDSGMHSVLYDDGEFESLILANEKVQWIDAEESVKKTKF 340
R+KVYWP+D+++Y G V S+D+DSG H V YDDGE ES+ LA EK++WI EE+V+ KF
Sbjct: 111 RIKVYWPLDKSWYEGFVRSFDKDSGKHLVQYDDGEEESVELAKEKIEWI--EETVR--KF 166
Query: 339 RRLKKLSESQRESNFEEDKCLPTPQPETPSLEVSKRAEGSDSLD 208
+RL++ S+F +K + E +LE + G DS D
Sbjct: 167 KRLRR-----GGSSFSVEKMV--IDDEVENLEDEEEDNGDDSSD 203
>gb|AAT67045.1| DNA mismatch repair protein [Petunia x hybrida]
Length = 1303
Score = 80.5 bits (197), Expect = 2e-13
Identities = 44/111 (39%), Positives = 64/111 (57%)
Frame = -1
Query: 519 RLKVYWPMDEAYYVGCVHSYDEDSGMHSVLYDDGEFESLILANEKVQWIDAEESVKKTKF 340
R+KVYWP+D+ +Y G V S+D SG H V YDDGE E + LA EK++W+ E KF
Sbjct: 91 RVKVYWPLDKNWYEGFVKSFDSASGKHLVEYDDGEEEMIELAEEKIEWV---EEAPARKF 147
Query: 339 RRLKKLSESQRESNFEEDKCLPTPQPETPSLEVSKRAEGSDSLDAGVKEAE 187
RRL++ S + EE+K E+ + S+ + +++D GV E E
Sbjct: 148 RRLRRFSVVEEAEKEEEEK---LEDLESVEDDDSEDEDWEENVDKGVDEGE 195
>gb|EPS71963.1| hypothetical protein M569_02799, partial [Genlisea aurea]
Length = 423
Score = 79.3 bits (194), Expect = 5e-13
Identities = 44/109 (40%), Positives = 66/109 (60%)
Frame = -1
Query: 519 RLKVYWPMDEAYYVGCVHSYDEDSGMHSVLYDDGEFESLILANEKVQWIDAEESVKKTKF 340
R++V+WP+D+++Y GCV S+DE SG H V YDDGE E L L++EK+ WI+ KF
Sbjct: 91 RVRVFWPLDKSWYDGCVMSFDEVSGRHLVKYDDGEEEMLNLSDEKIDWIEG----TTRKF 146
Query: 339 RRLKKLSESQRESNFEEDKCLPTPQPETPSLEVSKRAEGSDSLDAGVKE 193
RRL+K S E + EE++ L + + + + AE + +D V E
Sbjct: 147 RRLRKF--SLLEEDDEEEQDLKEVEDNSSDDDWLENAEKEEVIDDDVLE 193
>ref|XP_004229397.1| PREDICTED: DNA mismatch repair protein MSH6-like [Solanum
lycopersicum]
Length = 1312
Score = 77.0 bits (188), Expect = 2e-12
Identities = 44/121 (36%), Positives = 66/121 (54%), Gaps = 10/121 (8%)
Frame = -1
Query: 519 RLKVYWPMDEAYYVGCVHSYDEDSGMHSVLYDDGEFESLILANEKVQWIDAEESVKKTKF 340
R+KVYWP+D+ +Y GCV S+D SG H V YDDG+ E + LA EK++W+ A K
Sbjct: 105 RVKVYWPLDKIWYEGCVKSFDSSSGEHLVKYDDGDEEMIDLAEEKIEWVKA----PVRKL 160
Query: 339 RRLKKLSESQRESNFEEDKCLPTPQPETPSLE----------VSKRAEGSDSLDAGVKEA 190
RRL++ S + E EE+K E S + VS+ + S+ +D ++E
Sbjct: 161 RRLRRSSVVEEEEE-EEEKLEDLKSVEDDSEDEDWGKDAAKLVSEGEDASEDMDLEIEEE 219
Query: 189 E 187
+
Sbjct: 220 D 220
>ref|XP_006349194.1| PREDICTED: DNA mismatch repair protein MSH6-like [Solanum
tuberosum]
Length = 1308
Score = 75.1 bits (183), Expect = 9e-12
Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 9/120 (7%)
Frame = -1
Query: 519 RLKVYWPMDEAYYVGCVHSYDEDSGMHSVLYDDGEFESLILANEKVQWIDAEESVKKTKF 340
R+KVYWP+D+ +Y GCV S+D SG H V YDDG+ E + L+ EK++W+ A K
Sbjct: 102 RVKVYWPLDKIWYEGCVKSFDSSSGEHLVKYDDGDEEMIDLSEEKIEWVKA----PVRKL 157
Query: 339 RRLKKLS----ESQRESNFEEDKCLPTPQPE-----TPSLEVSKRAEGSDSLDAGVKEAE 187
RRL++ S + + E E+ K + + + +VS+ + S+ +D ++E +
Sbjct: 158 RRLRRSSVVEEKEEEEEKLEDLKSVEDDSEDEDWGKDAAKQVSEGEDASEDMDLEIEEED 217
>emb|CAN78918.1| hypothetical protein VITISV_032225 [Vitis vinifera]
Length = 1349
Score = 73.6 bits (179), Expect = 3e-11
Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 6/117 (5%)
Frame = -1
Query: 519 RLKVYWPMDEAYYVGCVHSYDEDSGMHSVLYDDGEFESLILANEKVQWIDAEESVKKTKF 340
R+KVYWP+D+++YVGCV S+DE +G H V YDD + E+L L EK++W++ K
Sbjct: 108 RVKVYWPLDKSWYVGCVKSFDELTGEHLVQYDDADEETLDLGKEKIEWVED----KGRSL 163
Query: 339 RRLKKLSESQR------ESNFEEDKCLPTPQPETPSLEVSKRAEGSDSLDAGVKEAE 187
RRL++ S ++ E+N EE+ E + DS D +E E
Sbjct: 164 RRLRRGSVFEKGVVPVGEANVEEESGGDDSSDEDWGKSKGREEVEDDSEDVEFEEEE 220
>ref|XP_006661208.1| PREDICTED: DNA mismatch repair protein MSH6-like, partial [Oryza
brachyantha]
Length = 1227
Score = 72.8 bits (177), Expect = 5e-11
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Frame = -1
Query: 519 RLKVYWPMDEAYYVGCVHSYDEDSGMHSVLYDDGEFESLILANEKVQWIDAEESV---KK 349
RL+VYWP+D+A+Y G V +YD S H V YDDGE E + LANE+ +W EE V
Sbjct: 51 RLRVYWPLDDAWYEGRVEAYDVGSRRHRVRYDDGEEEEVDLANERYEWAAGEERVTPQPA 110
Query: 348 TKFRRLKKLSES 313
K RRL+++S++
Sbjct: 111 RKLRRLRRMSDA 122
>emb|CBI36942.3| unnamed protein product [Vitis vinifera]
Length = 1237
Score = 72.8 bits (177), Expect = 5e-11
Identities = 36/84 (42%), Positives = 55/84 (65%), Gaps = 6/84 (7%)
Frame = -1
Query: 519 RLKVYWPMDEAYYVGCVHSYDEDSGMHSVLYDDGEFESLILANEKVQWIDAEESVKKTKF 340
R+KVYWP+D+++YVGCV S+DE +G H V YDD + E+L L EK++W++ K
Sbjct: 70 RVKVYWPLDKSWYVGCVKSFDELTGEHLVQYDDADEETLDLGKEKIEWVED----KGRSL 125
Query: 339 RRLKKLSESQR------ESNFEED 286
RRL++ S ++ E+N EE+
Sbjct: 126 RRLRRGSVFEKGVVPVGEANVEEE 149
>ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Vitis vinifera]
Length = 1297
Score = 72.8 bits (177), Expect = 5e-11
Identities = 36/84 (42%), Positives = 55/84 (65%), Gaps = 6/84 (7%)
Frame = -1
Query: 519 RLKVYWPMDEAYYVGCVHSYDEDSGMHSVLYDDGEFESLILANEKVQWIDAEESVKKTKF 340
R+KVYWP+D+++YVGCV S+DE +G H V YDD + E+L L EK++W++ K
Sbjct: 100 RVKVYWPLDKSWYVGCVKSFDELTGEHLVQYDDADEETLDLGKEKIEWVED----KGRSL 155
Query: 339 RRLKKLSESQR------ESNFEED 286
RRL++ S ++ E+N EE+
Sbjct: 156 RRLRRGSVFEKGVVPVGEANVEEE 179
>ref|XP_004136154.1| PREDICTED: DNA mismatch repair protein MSH6-like [Cucumis sativus]
Length = 1307
Score = 72.4 bits (176), Expect = 6e-11
Identities = 36/78 (46%), Positives = 51/78 (65%)
Frame = -1
Query: 519 RLKVYWPMDEAYYVGCVHSYDEDSGMHSVLYDDGEFESLILANEKVQWIDAEESVKKTKF 340
++KVYWP+D+ +Y G V +DE +G H V YDD E E L+L NEK++W+ EES K KF
Sbjct: 102 KIKVYWPLDKTWYEGRVKMFDEKAGKHLVQYDDAEEELLVLGNEKIEWV--EESAK--KF 157
Query: 339 RRLKKLSESQRESNFEED 286
+RL++ S + ED
Sbjct: 158 KRLRRGSSPPVSAAVLED 175
>ref|XP_006604739.1| PREDICTED: DNA mismatch repair protein MSH6-like [Glycine max]
Length = 1273
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Frame = -1
Query: 519 RLKVYWPMDEAYYVGCVHSYDEDSGMHSVLYDDGEFESLILANEKVQWIDAEESVKKTKF 340
R+KVYWP+D+A+Y G V S+D + H V YDDGE ESL L+ EK++W+ S K +
Sbjct: 93 RIKVYWPLDKAWYEGSVKSFDSLTSKHVVRYDDGEEESLDLSKEKIEWLQESSSKKLKRL 152
Query: 339 RR----LKKLSESQRESNFEEDK 283
RR ++K+ + EE++
Sbjct: 153 RRGVPAVRKMMIDDDDEEVEEEE 175
>ref|XP_002320307.2| DNA mismatch repair protein MSH6-1 [Populus trichocarpa]
gi|550324012|gb|EEE98622.2| DNA mismatch repair protein
MSH6-1 [Populus trichocarpa]
Length = 1293
Score = 71.6 bits (174), Expect = 1e-10
Identities = 36/79 (45%), Positives = 54/79 (68%)
Frame = -1
Query: 519 RLKVYWPMDEAYYVGCVHSYDEDSGMHSVLYDDGEFESLILANEKVQWIDAEESVKKTKF 340
R++VYWP+D+++Y G V SYD++S H + YDD E E L L NEK++W+ E VK KF
Sbjct: 105 RVRVYWPLDKSWYEGLVKSYDDESKKHLIQYDDSEEELLDLNNEKIEWV--EPCVK--KF 160
Query: 339 RRLKKLSESQRESNFEEDK 283
+RL++ S R+ E+D+
Sbjct: 161 KRLRRGSLGFRKIVLEDDE 179
>ref|XP_002333974.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 71.6 bits (174), Expect = 1e-10
Identities = 36/79 (45%), Positives = 54/79 (68%)
Frame = -1
Query: 519 RLKVYWPMDEAYYVGCVHSYDEDSGMHSVLYDDGEFESLILANEKVQWIDAEESVKKTKF 340
R++VYWP+D+++Y G V SYD++S H + YDD E E L L NEK++W+ E VK KF
Sbjct: 105 RVRVYWPLDKSWYEGLVKSYDDESKKHLIQYDDSEEELLDLNNEKIEWV--EPCVK--KF 160
Query: 339 RRLKKLSESQRESNFEEDK 283
+RL++ S R+ E+D+
Sbjct: 161 KRLRRGSLGFRKIVLEDDE 179
>ref|XP_003625965.1| DNA mismatch repair protein Msh6-1 [Medicago truncatula]
gi|355500980|gb|AES82183.1| DNA mismatch repair protein
Msh6-1 [Medicago truncatula]
Length = 1312
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/80 (41%), Positives = 50/80 (62%)
Frame = -1
Query: 519 RLKVYWPMDEAYYVGCVHSYDEDSGMHSVLYDDGEFESLILANEKVQWIDAEESVKKTKF 340
R++VYWP+DEA+Y G V S+D + H + YDD E ES+ L+ EK++WI S K
Sbjct: 94 RIRVYWPLDEAWYEGTVKSFDTVTSKHRIRYDDDEEESIDLSKEKIEWIQDSSS---KKL 150
Query: 339 RRLKKLSESQRESNFEEDKC 280
+RL++ S R+ E ++C
Sbjct: 151 KRLRRGSSPIRKMVIEVEEC 170
>ref|XP_006444483.1| hypothetical protein CICLE_v10018525mg [Citrus clementina]
gi|557546745|gb|ESR57723.1| hypothetical protein
CICLE_v10018525mg [Citrus clementina]
Length = 1288
Score = 69.7 bits (169), Expect = 4e-10
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Frame = -1
Query: 519 RLKVYWPMDEAYYVGCVHSYDEDSGMHSVLYDDGEFESLILANEKVQWIDAEESVKKTKF 340
R++VYWP+D+A+Y GCV S+D++ H V YDDGE E L L EK++W+ S+ K +
Sbjct: 109 RIRVYWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLK-RL 167
Query: 339 RR---LKKLSESQRESNFEEDK 283
RR K + E E ED+
Sbjct: 168 RRDSFKKVVVEDDEEMENVEDE 189
>ref|XP_006841417.1| hypothetical protein AMTR_s00003p00029910 [Amborella trichopoda]
gi|548843438|gb|ERN03092.1| hypothetical protein
AMTR_s00003p00029910 [Amborella trichopoda]
Length = 1362
Score = 69.3 bits (168), Expect = 5e-10
Identities = 30/78 (38%), Positives = 52/78 (66%)
Frame = -1
Query: 519 RLKVYWPMDEAYYVGCVHSYDEDSGMHSVLYDDGEFESLILANEKVQWIDAEESVKKTKF 340
R++VYWP+D+ +Y GC+ ++D+ SG H VLYDD + E L L EK++W++ S ++ +
Sbjct: 154 RIRVYWPLDKEWYEGCIKAHDKPSGKHIVLYDDAQEEELDLEREKIEWVE-PPSKRRGRL 212
Query: 339 RRLKKLSESQRESNFEED 286
RR+ +R +FE++
Sbjct: 213 RRVS--DTDKRAISFEDE 228
>ref|XP_004494416.1| PREDICTED: DNA mismatch repair protein MSH6-like [Cicer arietinum]
Length = 1301
Score = 69.3 bits (168), Expect = 5e-10
Identities = 38/87 (43%), Positives = 55/87 (63%)
Frame = -1
Query: 519 RLKVYWPMDEAYYVGCVHSYDEDSGMHSVLYDDGEFESLILANEKVQWIDAEESVKKTKF 340
R+KVYWP+D+A+Y G V S+D+ + H + YDD E ES+ L+ EK +WI E S KK K
Sbjct: 101 RIKVYWPIDDAWYEGFVKSFDKLTSKHRIHYDDDEEESIDLSKEKFEWIQ-ERSSKKLK- 158
Query: 339 RRLKKLSESQRESNFEEDKCLPTPQPE 259
RL++ S R+ EE+ +P+ E
Sbjct: 159 -RLRRGSSPIRKMVIEENVVEDSPKEE 184
>ref|XP_006492326.1| PREDICTED: DNA mismatch repair protein MSH6-like [Citrus sinensis]
Length = 1288
Score = 68.9 bits (167), Expect = 6e-10
Identities = 28/57 (49%), Positives = 40/57 (70%)
Frame = -1
Query: 519 RLKVYWPMDEAYYVGCVHSYDEDSGMHSVLYDDGEFESLILANEKVQWIDAEESVKK 349
R++VYWP+D+A+Y GCV S+D++ H V YDDGE E L L EK++W+ S+ K
Sbjct: 109 RIRVYWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLK 165
>ref|XP_006396405.1| hypothetical protein EUTSA_v10028364mg [Eutrema salsugineum]
gi|557097422|gb|ESQ37858.1| hypothetical protein
EUTSA_v10028364mg [Eutrema salsugineum]
Length = 1336
Score = 68.9 bits (167), Expect = 6e-10
Identities = 37/104 (35%), Positives = 60/104 (57%)
Frame = -1
Query: 519 RLKVYWPMDEAYYVGCVHSYDEDSGMHSVLYDDGEFESLILANEKVQWIDAEESVKKTKF 340
+++VYWP+D+ +Y G V SY++ G H V YDDGE ESL L EK++W E+S +F
Sbjct: 128 QVRVYWPLDKKWYDGIVTSYNKGEGKHVVEYDDGEEESLDLGKEKIEWRAEEKS--GLRF 185
Query: 339 RRLKKLSESQRESNFEEDKCLPTPQPETPSLEVSKRAEGSDSLD 208
+RL++ + + R ++D + E +++G DS D
Sbjct: 186 KRLRRDASAFRRVVTDDDDDVDVEMGNVDE-EKESKSDGDDSSD 228