BLASTX nr result

ID: Ephedra25_contig00023564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00023564
         (581 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006844973.1| hypothetical protein AMTR_s00058p00182990 [A...    75   1e-11

>ref|XP_006844973.1| hypothetical protein AMTR_s00058p00182990 [Amborella trichopoda]
           gi|548847464|gb|ERN06648.1| hypothetical protein
           AMTR_s00058p00182990 [Amborella trichopoda]
          Length = 286

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 8/127 (6%)
 Frame = -2

Query: 379 DPPSILVLGFDNHGRSSFINTMFRACYREEGPLLM*AQTDP--TPQTTRSRMLYALHNTF 206
           +PP+I +LGF +HG+SS +NTM R  Y EEGPL++ A+T P     TT      ++ N F
Sbjct: 57  NPPTIFLLGFHDHGKSSLVNTMCRVLYGEEGPLILRAETAPHCLLSTTSRHKRVSVRNPF 116

Query: 205 LPHPETLLNLIDTPSLAITTSANEVCISNALKGVDCCRPKMK------IKIPDCVIFVAN 44
             +PE +++L+DTP L       +  +   LK V    P+ +        +P+CV+ V  
Sbjct: 117 GGNPENIISLVDTPPLPAADKLLKSDVKTLLKVV----PENQNPGGGMCPVPECVVLVLG 172

Query: 43  ASECCVG 23
           + +  +G
Sbjct: 173 SKDVMLG 179


Top