BLASTX nr result

ID: Ephedra25_contig00023270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00023270
         (580 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523528.1| conserved hypothetical protein [Ricinus comm...    60   4e-07

>ref|XP_002523528.1| conserved hypothetical protein [Ricinus communis]
           gi|223537235|gb|EEF38867.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 472

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 48/187 (25%), Positives = 96/187 (51%), Gaps = 3/187 (1%)
 Frame = +3

Query: 12  LKSVTLRNYMHLQFGAATDGDI---WEVTPTKEKDVVRLSLHAVSKAIWNNSAASNWVLA 182
           LK+  +  + +LQF +    +    +E+T   +  V RL  +  +K  W  S   NW+ A
Sbjct: 178 LKAEWIERHEYLQFSSDDVNEKAAGYEITMMPDGHV-RLRSNFFNK-FWRRSP--NWIWA 233

Query: 183 DADFKIAEADRNSLFMVSKNSDNTVSLKCMANNNFLNMAKGDTWAPNCIAAKESSVTSLC 362
           D+   +  +DR++LF   K +D+T++L+   NN F +    +    +C+ A  +++T   
Sbjct: 234 DSTDTVG-SDRDTLFWPVKVNDDTIALRNAGNNRFCSSLTAER-KTDCLNAAVATITREA 291

Query: 363 KFMVKDAVKEHSMSNLVYQTQGIRSPYTSEKSVVSAEGSAPNKSNSQANVRLAMTYTNTL 542
           +  V++ V E S+ N+ +  +  R     E++ V+  GSA N+S   A + + + Y +T 
Sbjct: 292 RLQVEELVFERSIFNVRFLMEYAR--IFDERATVAGWGSAENQSEEAATLSITVGYEDTT 349

Query: 543 TASWHNA 563
           + ++ N+
Sbjct: 350 SFTFSNS 356


Top