BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00022966
         (828 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]    68   7e-19
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]    68   3e-18
gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsi...    59   6e-18
gb|EFA05312.1| hypothetical protein TcasGA2_TC015470 [Tribolium ...    71   2e-17
ref|XP_002064813.1| GK15001 [Drosophila willistoni] gi|194160898...    59   3e-17
emb|CAB75932.1| putative protein [Arabidopsis thaliana]                64   8e-17
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]    57   1e-16
gb|AAT38797.2| Polyprotein, putative [Solanum demissum]                61   5e-16
emb|CAN77122.1| hypothetical protein VITISV_013624 [Vitis vinifera]    62   7e-16
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]    59   7e-16
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]    68   2e-15
dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsi...    64   2e-15
emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]    57   2e-15
emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera]    62   3e-15
gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s...    59   4e-15
emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]    55   1e-14
gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsi...    63   1e-14
gb|ABM55238.1| integrase [Beta vulgaris]                               53   3e-14
gb|ABH08430.1| putative integrase [Beta vulgaris]                      53   3e-14
emb|CAN70616.1| hypothetical protein VITISV_006246 [Vitis vinifera]    58   1e-13

>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score = 67.8 bits (164), Expect(2) = 7e-19
 Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
 Frame = -3

Query: 211 KLHQKPF-KNRTRTMNQCLEIVHSDLCGPITPTTCD*KRYILTFFNDYSKMTWCFLLK*K 35
           K  +KPF K R+R  + CLEI+H+DLCGP+   +    RY L F +D+S+M+W + L+ K
Sbjct: 480 KQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHSRMSWVYFLQSK 539

Query: 34  SKVFEIFLMFQ 2
           ++ FE F  F+
Sbjct: 540 AETFETFKKFK 550



 Score = 53.1 bits (126), Expect(2) = 7e-19
 Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 13/197 (6%)
 Frame = -1

Query: 804 EINLVELKEDHIYVFFINKES--NKKGE*FLDSGCNSHMTRSKEVFIKFTNTYDEKHVKT 631
           + N VE +ED + +F    E   +     FLDSGC++HMT  K +F +   ++  K VK 
Sbjct: 278 QANYVEQEEDQVKLFMXYNEEVVSSNNIWFLDSGCSNHMTGIKSLFKELDESHKLK-VKL 336

Query: 630 AR**TLPVKGYEYITLNFRTSKV-ILKDALYVEGLQKNLISLYKLIM*KYNMF-----TF 469
                + V+G   + +N     V +L +  ++  L +NL+S+ +L++  Y++        
Sbjct: 337 GDDKQVXVEGKGIMAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCV 396

Query: 468 LREKLRDMLWIFYNQKFVVEGTEQNGLFVMEPIKAECY---LTNAEISNLWHNRLG--NI 304
           +++K  D   I  N +        N LF +E    E +   +     SNLWH R G  N+
Sbjct: 397 IKDKKSDQ--IIVNVRMAA-----NKLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNV 449

Query: 303 SNIYLDKVEAVVYHGPK 253
             + L   + +V+  PK
Sbjct: 450 KGLKLLSKKEMVFGLPK 466


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score = 67.8 bits (164), Expect(2) = 3e-18
 Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
 Frame = -3

Query: 211 KLHQKPF-KNRTRTMNQCLEIVHSDLCGPITPTTCD*KRYILTFFNDYSKMTWCFLLK*K 35
           K  +KPF K R+R  + CLEI+H+DLCGP+   +    RY L F +D+S+M+W + L+ K
Sbjct: 465 KQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHSRMSWVYFLQSK 524

Query: 34  SKVFEIFLMFQ 2
           ++ FE F  F+
Sbjct: 525 AETFETFKKFK 535



 Score = 51.2 bits (121), Expect(2) = 3e-18
 Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
 Frame = -1

Query: 804 EINLVELKEDHIYVFFINKES--NKKGE*FLDSGCNSHMTRSKEVFIKFTNTYDEKHVKT 631
           + N VE +ED + +F    E   +     FLDSGC++HMT  K +F +   ++  K VK 
Sbjct: 263 QANYVEQEEDQVKLFMAYNEEVVSSNNIWFLDSGCSNHMTGIKSLFKELDESHKLK-VKL 321

Query: 630 AR**TLPVKGYEYITLNFRTSKV-ILKDALYVEGLQKNLISLYKLIM*KYNMF-----TF 469
                + V+G     +N     V +L +  ++  L +NL+S+ +L++  Y++        
Sbjct: 322 GDDKQVQVEGKGTXAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCV 381

Query: 468 LREKLRDMLWIFYNQKFVVEGTEQNGLFVMEPIKAECY---LTNAEISNLWHNRLG--NI 304
           +++K  D       Q  V      N LF +E    E +   +     SNLWH R G  N+
Sbjct: 382 IKDKKSD-------QIIVBVRMAANKLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNV 434

Query: 303 SNIYLDKVEAVVYHGPK 253
             + L   + +V+  PK
Sbjct: 435 KGLKLLSKKEMVFGLPK 451


>gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1347

 Score = 59.3 bits (142), Expect(2) = 6e-18
 Identities = 45/175 (25%), Positives = 85/175 (48%), Gaps = 4/175 (2%)
 Frame = -1

Query: 789 ELKEDHIYVFFINKESNKKGE*--FLDSGCNSHMTRSKEVFIKFTNTYDEKHVKTAR**T 616
           ++ EDH+      +ES    E    +DSGC +HMT+ +  F     +  +  ++      
Sbjct: 303 DVNEDHMLFSASEEESTTLREDVWLVDSGCTNHMTKEERYFSNINKSI-KVPIRVRNGDI 361

Query: 615 LPVKGYEYITLNFRTSKVILKDALYVEGLQKNLISLYKLIM*KYNMFTFLREKLRDMLWI 436
           +   G   IT+  R  K I+K+   V GL+KNL+S+ ++I   Y    ++R + +  +  
Sbjct: 362 VMTAGKGDITVMTRHGKRIIKNVFLVPGLEKNLLSVPQIISSGY----WVRFQDKRCIIQ 417

Query: 435 FYNQKFV--VEGTEQNGLFVMEPIKAECYLTNAEISNLWHNRLGNISNIYLDKVE 277
             N K +  +E T+++    +  ++ E    N +    WH RLG++SN  L +++
Sbjct: 418 DANGKEIMNIEMTDKSFKIKLSSVEEEAMTANVQTEETWHKRLGHVSNKRLQQMQ 472



 Score = 58.5 bits (140), Expect(2) = 6e-18
 Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
 Frame = -3

Query: 217 LAKLHQKPFKNRTRTMN-QCLEIVHSDLCGPITPTTCD*KRYILTFFNDYSKMTWCFLLK 41
           L K  +K F   ++T   + LEIVH+D+CGP+   + D  RY + F +DY+ M W + LK
Sbjct: 495 LGKQSRKSFPKESQTKTREKLEIVHTDVCGPMQHQSIDGSRYYVLFLDDYTHMCWVYFLK 554

Query: 40  *KSKVFEIFLMFQ 2
            KS+ F  F  F+
Sbjct: 555 QKSETFATFKKFK 567


>gb|EFA05312.1| hypothetical protein TcasGA2_TC015470 [Tribolium castaneum]
          Length = 2375

 Score = 71.2 bits (173), Expect(2) = 2e-17
 Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
 Frame = -3

Query: 214 AKLHQKPFKNRT-RTMNQCLEIVHSDLCGPITPTTCD*KRYILTFFNDYSKMTWCFLLK* 38
           +K+ + PF  R+     + LE++HSDLCGPITP T D KRY LTF +DY+     +LLK 
Sbjct: 451 SKITKLPFGKRSDNKTTRVLELIHSDLCGPITPETHDGKRYFLTFLDDYTHFCVVYLLKS 510

Query: 37  KSKVFEIFLMFQ 2
           KS+VFE F  F+
Sbjct: 511 KSEVFEYFKCFE 522



 Score = 44.7 bits (104), Expect(2) = 2e-17
 Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 13/160 (8%)
 Frame = -1

Query: 738 KKGE*FLDSGCNSHMTRSKEVFIKFTNTYDEKHVKTAR**TLPVKGYEY------ITLNF 577
           KK + ++DSG   HM  SKE             +  A+   + +   E       + +N 
Sbjct: 264 KKMKWYVDSGATDHMVNSKEHLTNVRKLESPVKICVAKD-NVKLLATEIGDVNAVLRVNN 322

Query: 576 RTSKVILKDALYVEGLQKNLISLYKLIM*KYNMFTFLREKLRDMLWIFYNQKFVVEGTEQ 397
             ++  +K+ LYV+ L+ NL+S+ K+ +   N+ +F   K    + I  N K + EG   
Sbjct: 323 TVTRATIKNVLYVKNLKHNLLSVQKIELASLNV-SFEHGK----VVIKRNSKVLAEGKRI 377

Query: 396 NGLF-VMEPIKAECYLTNAEIS------NLWHNRLGNISN 298
           + L+ +   ++ +C +  + +        LWH RLG++SN
Sbjct: 378 DNLYEICFEVENKCKVVCSNVCEVSASLKLWHRRLGHLSN 417


>ref|XP_002064813.1| GK15001 [Drosophila willistoni] gi|194160898|gb|EDW75799.1| GK15001
           [Drosophila willistoni]
          Length = 1249

 Score = 58.5 bits (140), Expect(2) = 3e-17
 Identities = 43/152 (28%), Positives = 73/152 (48%)
 Frame = -1

Query: 756 INKESNKKGE*FLDSGCNSHMTRSKEVFIKFTNTYDEKHVKTAR**TLPVKGYEYITLNF 577
           +  E+ K+ +  LDSG  SHM   K +F  F+  +DEK +  A    L  +G   +T+  
Sbjct: 259 LEAENMKREKWCLDSGATSHMCCDKSMFSDFS-VHDEK-ISLADAGYLRAEGKGKVTIRT 316

Query: 576 RTSKVILKDALYVEGLQKNLISLYKLIM*KYNMFTFLREKLRDMLWIFYNQKFVVEGTEQ 397
              K+ + + LYV GL  N +S+ ++I  +YN         + M  I  N + +++  + 
Sbjct: 317 GICKLTMNNVLYVPGLAGNFMSVARVI--EYNSVVHFE---KHMAKIIQNGECILKAKKI 371

Query: 396 NGLFVMEPIKAECYLTNAEISNLWHNRLGNIS 301
             LFV E      +    E  +LWH R G+++
Sbjct: 372 GNLFVFEAESENLFAAVGEDVSLWHKRFGHLN 403



 Score = 57.0 bits (136), Expect(2) = 3e-17
 Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
 Frame = -3

Query: 217 LAKLHQKPFKNRTRTMN-QCLEIVHSDLCGPITPTTCD*KRYILTFFNDYSKMTWCFLLK 41
           ++K+H +PF   T + + + L++VHSD+CGP    +    RY LTF +D S+  + + LK
Sbjct: 435 VSKIHVQPFPKMTESRSSELLQLVHSDVCGPFGTKSLGGSRYFLTFIDDKSRRIFVYFLK 494

Query: 40  *KSKVFEIFLMFQ 2
            K +VF  FL F+
Sbjct: 495 GKDEVFGKFLEFK 507


>emb|CAB75932.1| putative protein [Arabidopsis thaliana]
          Length = 1339

 Score = 63.5 bits (153), Expect(2) = 8e-17
 Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
 Frame = -3

Query: 211 KLHQKPFKNRTRTMNQC-LEIVHSDLCGPITPTTCD*KRYILTFFNDYSKMTWCFLLK*K 35
           K H++    +T   +   L++VHSD+CGPITP +   KRYIL+F +D+++ TW + L  K
Sbjct: 477 KQHRESMSKKTSWKSSTQLQLVHSDICGPITPISHSGKRYILSFIDDFTRKTWVYFLHEK 536

Query: 34  SKVFEIFLMFQ 2
           S+ F  F +F+
Sbjct: 537 SEAFATFKIFK 547



 Score = 50.4 bits (119), Expect(2) = 8e-17
 Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 12/178 (6%)
 Frame = -1

Query: 798 NLVELKEDH---IYVFFINKESNKKGE*FLDSGCNSHMTRSKEVFIKFTNTYDEKHVKTA 628
           N  EL+E+    +  +    ++N+    FLDSGC++HMT SKE F +    ++ + VK  
Sbjct: 273 NYAELEEEEELLLMAYVEQNQANRDEVWFLDSGCSNHMTGSKEWFSELEEGFN-RTVKLG 331

Query: 627 R**TLPVKGYEYITLNFRTSKVILKDALYVEGLQKNLISLYKLIM*KYNMFTFLREKLRD 448
               + V G   + +       ++ +  YV  L+ NL+SL +L   +  +   +R+    
Sbjct: 332 NDTRMSVVGKGSVKVKVNGVTQVIPEVYYVPELRNNLLSLGQLQ--ERGLAILIRD---G 386

Query: 447 MLWIFYNQKFVVEGTEQNG-----LFVMEPIKAECYLTNAEI----SNLWHNRLGNIS 301
              +++  K  +  T  +G     L   +P K    L   E+    ++LWH R G+++
Sbjct: 387 TCKVYHPSKGAIMETNMSGNRMFFLLASKPQKNSLCLQTEEVMDKENHLWHCRFGHLN 444


>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
          Length = 1285

 Score = 57.4 bits (137), Expect(2) = 1e-16
 Identities = 47/176 (26%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
 Frame = -1

Query: 720 LDSGCNSHMTRSKEVFIKFTN-TYDEKHVKTAR**TLPVKGYEYITLNFRTSKVI-LKDA 547
           +DSG  +H+  S + F +    +  E ++       + V     I LNF+ ++++ LK+ 
Sbjct: 263 VDSGATNHVCNSLQGFQETRQLSKGEVNIFLGDGTEVAVLAVGNIALNFKNNRILSLKNV 322

Query: 546 LYVEGLQKNLISLYKLIM*KYNMFTFLREKLRDMLWIFYNQKFVVEGTEQNGLFVMEPIK 367
           LYV  +++NLIS+  L    Y++     E   D + I + ++ +  G+  +GL++++ + 
Sbjct: 323 LYVPSIRRNLISVSSLSKNGYSV--CFNEFYDDSVVIKFREQIICSGSLIDGLYILK-VT 379

Query: 366 AECYLTNAEISN-------------------LWHNRLGNISNIYLDKVEAVVYHGP 256
            E  LTN+E++N                   LWH RLG+I+   LD++  +V  GP
Sbjct: 380 PELQLTNSEVNNFDIVAPLKRKCPIELSYTYLWHLRLGHIN---LDRISLLVKDGP 432



 Score = 55.8 bits (133), Expect(2) = 1e-16
 Identities = 27/70 (38%), Positives = 41/70 (58%)
 Frame = -3

Query: 211 KLHQKPFKNRTRTMNQCLEIVHSDLCGPITPTTCD*KRYILTFFNDYSKMTWCFLLK*KS 32
           K+  +PF  +    N  LE++HSDLCGP++        Y +TF  DYS+  + +LL+ KS
Sbjct: 451 KMTNRPFPLKGNRANDVLELIHSDLCGPMSVQARGGFEYFVTFTYDYSRYGYIYLLRRKS 510

Query: 31  KVFEIFLMFQ 2
           + FE F  F+
Sbjct: 511 ECFEKFKAFK 520


>gb|AAT38797.2| Polyprotein, putative [Solanum demissum]
          Length = 1793

 Score = 60.8 bits (146), Expect(2) = 5e-16
 Identities = 25/66 (37%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
 Frame = -3

Query: 196 PFK-NRTRTMNQCLEIVHSDLCGPITPTTCD*KRYILTFFNDYSKMTWCFLLK*KSKVFE 20
           PF+ N+    NQ L+++H+D+CGPI   +    +Y L F +DY++M W + ++ KS+VF+
Sbjct: 615 PFQANQVWRANQKLQLIHTDVCGPIKTDSLSGNKYFLLFIDDYTRMCWVYFIRLKSEVFD 674

Query: 19  IFLMFQ 2
           +F  F+
Sbjct: 675 VFKQFK 680



 Score = 50.4 bits (119), Expect(2) = 5e-16
 Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 17/197 (8%)
 Frame = -1

Query: 780 EDHIYV---FFINKESNKKGE*FLDSGCNSHMTRSKEVFIKFTNTYDEKHVKTAR**TLP 610
           ED ++    F IN+ S+      LDSGC  H+    E+F    +TY  K VK      + 
Sbjct: 420 EDQLFAVSYFSINESSDSW---ILDSGCTHHLCNDAEMFKFLDDTYKSK-VKVGNGEAVE 475

Query: 609 VKGYEYITLNFRTSKVILKDALYVEGLQKNLISLYKLIM*KYNMFTFLREKLRDMLWIFY 430
           VKG   ++++  +    + D LY   + +NL+S+ +++   Y++              F 
Sbjct: 476 VKGRGTMSISIISGIKTIPDILYTPDMSQNLLSVGQMLENNYSLH-------------FK 522

Query: 429 NQKFVVEGTEQNGLFVM-----------EPIKAECY-LTNAEISNLWHNRLG--NISNIY 292
           N + VV       LF +           E I  + Y +T    +NLWH R G  N+ +I 
Sbjct: 523 NHECVVSDPSGVELFYVKMSNIMFSVDWEKITEQAYTITLQTCTNLWHKRFGHFNLRSIA 582

Query: 291 LDKVEAVVYHGPKNITS 241
             K + +V + P+ +++
Sbjct: 583 EMKKKELVENMPEFLSN 599


>emb|CAN77122.1| hypothetical protein VITISV_013624 [Vitis vinifera]
          Length = 1269

 Score = 62.0 bits (149), Expect(2) = 7e-16
 Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
 Frame = -3

Query: 217 LAKLHQKPF-KNRTRTMNQCLEIVHSDLCGPITPTTCD*KRYILTFFNDYSKMTWCFLLK 41
           L K  ++PF +N ++     LE++HSD+CGP++ T+     Y   F +D+S+MTW + LK
Sbjct: 485 LGKQQRQPFPQNMSKRATHKLELIHSDICGPMSTTSLSNNVYFALFIDDFSRMTWVYFLK 544

Query: 40  *KSKVFEIFLMFQ 2
            KS+V  +F  F+
Sbjct: 545 TKSQVLSMFKSFK 557



 Score = 48.9 bits (115), Expect(2) = 7e-16
 Identities = 42/186 (22%), Positives = 81/186 (43%), Gaps = 10/186 (5%)
 Frame = -1

Query: 828 KTSSHPPTEINLV--ELKEDHIYVFFINK--ESNKKGE*FLDSGCNSHMTRSKEVFIKFT 661
           K S H P +   V  E K D  ++F  ++   S++     +DSGC SHMT+   +F    
Sbjct: 278 KQSQHQPEQHASVTEEDKNDDEHLFMASQALSSHELNTWLIDSGCTSHMTKHLSIFTSID 337

Query: 660 NTYDEKHVKTAR**TLPVKGYEYITLNFRTSKVILKDALYVEGLQKNLISLYKLIM*KYN 481
            +   K VK      +  KG   I ++ +    I+ + LY+  L +NL+S+ +++   Y 
Sbjct: 338 RSVQPK-VKLGNGEVVQAKGKGTIAISTKRGTKIVTNVLYIPDLDQNLLSVAQMLRNGYA 396

Query: 480 M-----FTFLREKLRDMLWIFYNQKFVVEGTEQNGLFV-MEPIKAECYLTNAEISNLWHN 319
           +     F F+ +         +  K        N  ++ ++ ++   +    + S +WH 
Sbjct: 397 VSFKENFCFISD--------VHGTKIAKIKMNGNSFYLKLDLVEGHVFSAKIDESVVWHK 448

Query: 318 RLGNIS 301
           R G+ +
Sbjct: 449 RYGHFN 454


>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
          Length = 1109

 Score = 58.5 bits (140), Expect(2) = 7e-16
 Identities = 27/60 (45%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
 Frame = -3

Query: 211 KLHQKPF-KNRTRTMNQCLEIVHSDLCGPITPTTCD*KRYILTFFNDYSKMTWCFLLK*K 35
           K  +KPF K R+R  + CLEI+H+DLCGP+   +    RY L F +D+S+M+W + L+ K
Sbjct: 466 KQSKKPFPKGRSRRASSCLEIIHADLCGPMQIASFGGSRYFLLFTDDHSRMSWVYFLQSK 525



 Score = 52.4 bits (124), Expect(2) = 7e-16
 Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 9/193 (4%)
 Frame = -1

Query: 804 EINLVELKEDHIYVFFINKES--NKKGE*FLDSGCNSHMTRSKEVFIKFTNTYDEKHVKT 631
           + N VE +ED + +F    E         FLDSGC++HMT  K +F +   ++  K VK 
Sbjct: 264 QANYVEQEEDQVKLFMAYNEEVVXSNNIWFLDSGCSNHMTGIKSLFKELDESHKLK-VKL 322

Query: 630 AR**TLPVKGYEYITLNFRTSKV-ILKDALYVEGLQKNLISLYKLIM*KYN-MFTFLREK 457
                + V+G   + +N     V +L +  ++  L +NL+S+ +L++  Y+ +F      
Sbjct: 323 GDDKQVXVEGKGTVAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGSTCV 382

Query: 456 LRDMLWIFYNQKFVVEGTEQNGLFVMEPIKAECY---LTNAEISNLWHNRLG--NISNIY 292
           ++D     ++Q  V      N LF +E    E +   +     SNLWH R G  N+  + 
Sbjct: 383 IKDKK---FDQIIVDVRMAANKLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLK 439

Query: 291 LDKVEAVVYHGPK 253
           L   + +V+  PK
Sbjct: 440 LLSKKEMVFGLPK 452


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score = 67.8 bits (164), Expect(2) = 2e-15
 Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
 Frame = -3

Query: 211 KLHQKPF-KNRTRTMNQCLEIVHSDLCGPITPTTCD*KRYILTFFNDYSKMTWCFLLK*K 35
           K  +KPF K R+R  + CLEI+H+DLCGP+   +    RY L F +D+S+M+W + L+ K
Sbjct: 591 KQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHSRMSWVYFLQSK 650

Query: 34  SKVFEIFLMFQ 2
           ++ FE F  F+
Sbjct: 651 AETFETFKKFK 661



 Score = 41.6 bits (96), Expect(2) = 2e-15
 Identities = 49/192 (25%), Positives = 78/192 (40%), Gaps = 8/192 (4%)
 Frame = -1

Query: 804 EINLVELKEDHIYVFFINKES--NKKGE*FLDSGCNSHMTRSKEVFIKFTNTYDEKH--- 640
           + N VE +ED + +F    E   +     FLDSGC++HMT  K +F       DE H   
Sbjct: 405 QANYVEQEEDQVKLFMAYNEEVVSSNNIWFLDSGCSNHMTGIKSLF----KELDESHKLX 460

Query: 639 VKTAR**TLPVKGYEYITLNFRTSKV-ILKDALYVEGLQKNLISLYKLIM*KYNMFTFLR 463
           VK      + V+G   + +N     V +L +  ++  L + L+        K +      
Sbjct: 461 VKLGDDXQVQVEGKGTVAVNNGHGNVKLLYNVYFIPSLTEKLVKCGATYDKKSDQIIVDV 520

Query: 462 EKLRDMLWIFYNQKFVVEGTEQNGLFVMEPIKAECYLTNAEISNLWHNRLG--NISNIYL 289
               + L+        V   E++ L V E  +          SNLWH R G  N+  + L
Sbjct: 521 RMAANKLF-----PLEVSSIEKHALVVKETSE----------SNLWHLRYGHLNVKGLKL 565

Query: 288 DKVEAVVYHGPK 253
              + +V+  PK
Sbjct: 566 LSKKEMVFELPK 577


>dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1499

 Score = 63.9 bits (154), Expect(2) = 2e-15
 Identities = 29/65 (44%), Positives = 46/65 (70%)
 Frame = -3

Query: 196 PFKNRTRTMNQCLEIVHSDLCGPITPTTCD*KRYILTFFNDYSKMTWCFLLK*KSKVFEI 17
           P K+++ T N+ LE++HSD+CGP+   + +  RY LTF +D+S+MTW + LK KS+V   
Sbjct: 505 PKKSQSNT-NKTLELIHSDVCGPMQTESINGSRYFLTFIDDFSRMTWVYFLKNKSEVITK 563

Query: 16  FLMFQ 2
           F +F+
Sbjct: 564 FKIFK 568



 Score = 45.1 bits (105), Expect(2) = 2e-15
 Identities = 42/180 (23%), Positives = 87/180 (48%), Gaps = 9/180 (5%)
 Frame = -1

Query: 783 KEDHIYVFFI---NKESNKKGE*--FLDSGCNSHMTRSKEVFIKFTNTYDEKHVKTAR** 619
           KED  ++ F     KE +  GE    +DSGC +HM++    FI    +  +  ++     
Sbjct: 300 KEDECHMLFSAVEEKEISTIGEETWLVDSGCTNHMSKDVRHFIALDRS-KKIIIRIGNGG 358

Query: 618 TLPVKGYEYITLNFRTSKVILKDALYVEGLQKNLISLYKLIM*KYNMFTFLREKLRDMLW 439
            +  +G   I ++      ++KD LYV  L +NL+S+ ++I    N +  + E  + ++ 
Sbjct: 359 KVVSEGKGDIRVSTNKGDHVIKDVLYVPELARNLLSVSQMIS---NGYRVIFEDNKCVIQ 415

Query: 438 IFYNQKFV-VEGTEQNGLFVMEPIKAECYLT---NAEISNLWHNRLGNISNIYLDKVEAV 271
               +K + ++  +++   + +  + E Y+      E ++LWH R G+++    DK+E +
Sbjct: 416 DLKGRKILDIKMKDRSFPIIWKKSREETYMAFEEKEEQTDLWHKRFGHVN---YDKIETM 472


>emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]
          Length = 1265

 Score = 57.4 bits (137), Expect(2) = 2e-15
 Identities = 27/65 (41%), Positives = 43/65 (66%)
 Frame = -3

Query: 196 PFKNRTRTMNQCLEIVHSDLCGPITPTTCD*KRYILTFFNDYSKMTWCFLLK*KSKVFEI 17
           P+K+  R  +Q L +VH+D+ GPI P +   KRY++TF +D+S+ TW + L  KS+ F +
Sbjct: 461 PWKSTWRA-SQILXLVHADIXGPIKPISNSKKRYLITFTDDFSRKTWVYFLIEKSEAFVV 519

Query: 16  FLMFQ 2
           F  F+
Sbjct: 520 FKRFK 524



 Score = 51.6 bits (122), Expect(2) = 2e-15
 Identities = 44/177 (24%), Positives = 87/177 (49%), Gaps = 9/177 (5%)
 Frame = -1

Query: 804 EINLVELKEDHIYVFFIN-KESNKKGE*FLDSGCNSHMTRSKEVFIKFTNTYDEKHVKTA 628
           E N  + +E+ + + +++  +++++   FLDSGC++HM  +KE F+ F  ++ +      
Sbjct: 267 EANYADTQEEMLLMAYVDMNKAHREDMWFLDSGCSNHMCGTKEYFLDFDGSFRDS----- 321

Query: 627 R**TLPVKGYEYITLNFRTSKVIL-KDALYVEGLQKNLISLYKLIM*KYNMFTFLREKLR 451
                       + L   TS V+  K   YV  L+ NL+S+ +L   K     F   K +
Sbjct: 322 ------------VKLGNNTSMVVTGKGVFYVPELKNNLLSIGQL-QEKGLTILFQSGKCK 368

Query: 450 DMLWIFYNQKFVVEGTE--QNGLFVM----EPIKAECY-LTNAEISNLWHNRLGNIS 301
               +F+ ++ V+   +   N +F++    +PI + C+     +I +LWH R G++S
Sbjct: 369 ----VFHPERGVITEMKMSSNRMFMLHAISQPIASTCFNAITEDIVHLWHCRYGHLS 421


>emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera]
          Length = 1291

 Score = 62.0 bits (149), Expect(2) = 3e-15
 Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
 Frame = -3

Query: 217 LAKLHQKPF-KNRTRTMNQCLEIVHSDLCGPITPTTCD*KRYILTFFNDYSKMTWCFLLK 41
           L K  ++PF +N ++     LE++HSD+CGP++ T+     Y   F +D+S+MTW + LK
Sbjct: 499 LGKQQRQPFPQNMSKRATHKLELIHSDICGPMSTTSLSNNVYFALFIDDFSRMTWVYFLK 558

Query: 40  *KSKVFEIFLMFQ 2
            KS+V  +F  F+
Sbjct: 559 TKSQVLSMFKSFK 571



 Score = 46.6 bits (109), Expect(2) = 3e-15
 Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 12/172 (6%)
 Frame = -1

Query: 780 EDHIYVFFINKESNKKGE*FLDSGCNSHMTRSKEVFIKFTNTYDEKHVKTAR**TLPVKG 601
           ++H+++      S++     +DSGC SHMT+   +F     +   K VK      +  KG
Sbjct: 312 DEHLFMASQALSSHELNTWLIDSGCTSHMTKHLSIFTSIDRSVQPK-VKLGNGEVVQAKG 370

Query: 600 YEYITLNFRTSKVILKDALYVEGLQKNLISLYKLIM*KYNMFTFLREKLRDMLWIFYNQK 421
              I ++ +    I  + LY+  L +NL+S+ ++              LR+   I + + 
Sbjct: 371 KGTIAISTKKGTKIXTNVLYIPDLDQNLLSVAQM--------------LRNGYAISFKEN 416

Query: 420 FV----VEGTE-----QNG---LFVMEPIKAECYLTNAEISNLWHNRLGNIS 301
           F     V GTE      NG      ++ ++   +    + S +WH R G+ +
Sbjct: 417 FCFISDVHGTEIAKIKMNGNSFYLKLDLVEGHVFSAKIDESVVWHKRYGHFN 468


>gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1038

 Score = 58.5 bits (140), Expect(2) = 4e-15
 Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 5/189 (2%)
 Frame = -1

Query: 828 KTSSHPPTEINLVELKEDHIYVFFINKESNKKGE*FLDSGCNSHMTRSKEVFIKFTNTYD 649
           + S  P  + NL E   + I           K +  LD+G + H   ++E+   + +T D
Sbjct: 301 RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTVD 360

Query: 648 EKHVKTAR**TLPVKGYEYITLNFRTSKVI-LKDALYVEGLQKNLISLYKLIM*KYNMFT 472
            + V      T  V G   + L   + K + L + LYV  L++NL+S    ++ +  +  
Sbjct: 361 GECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVS--GSLLNRAGLKI 418

Query: 471 FLREKLRDMLWIFYNQKFVVEGTEQNGLFVMEPIKAECYLTNA----EISNLWHNRLGNI 304
            L     D + +  N  FV +G   NGLFV+  I      +++    E +NLWH RLG++
Sbjct: 419 VLEG---DKVVLTKNGNFVGKGYLSNGLFVLNTISMNANASSSAYLIESANLWHGRLGHV 475

Query: 303 SNIYLDKVE 277
           +   + K++
Sbjct: 476 NFASIRKLK 484



 Score = 49.7 bits (117), Expect(2) = 4e-15
 Identities = 24/71 (33%), Positives = 42/71 (59%)
 Frame = -3

Query: 214 AKLHQKPFKNRTRTMNQCLEIVHSDLCGPITPTTCD*KRYILTFFNDYSKMTWCFLLK*K 35
           +K H+KPFK       + LE+++SDL    T  +   K Y ++F +DYS+ T  +L+K K
Sbjct: 506 SKFHKKPFKPVEYRTTELLELIYSDLADFRTTASRGGKNYYVSFVDDYSRFTKIYLIKTK 565

Query: 34  SKVFEIFLMFQ 2
           ++   +F+ F+
Sbjct: 566 NEAVSMFVKFK 576


>emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]
          Length = 1544

 Score = 55.5 bits (132), Expect(2) = 1e-14
 Identities = 27/70 (38%), Positives = 42/70 (60%)
 Frame = -3

Query: 211  KLHQKPFKNRTRTMNQCLEIVHSDLCGPITPTTCD*KRYILTFFNDYSKMTWCFLLK*KS 32
            K+ ++PF  +    N  LE++HSDLCGP++        Y +TF +DYS+  + +LL  KS
Sbjct: 803  KMTKRPFPLKGNRANDVLELIHSDLCGPMSVQARGGFEYFVTFTDDYSRYGYIYLLCRKS 862

Query: 31   KVFEIFLMFQ 2
            + FE F  F+
Sbjct: 863  ECFEKFKAFK 872



 Score = 51.2 bits (121), Expect(2) = 1e-14
 Identities = 37/132 (28%), Positives = 68/132 (51%), Gaps = 20/132 (15%)
 Frame = -1

Query: 591  ITLNFRTSKVI-LKDALYVEGLQKNLISLYKLIM*KYNMFTFLREKLRDMLWIFYNQKFV 415
            I LNF+ ++ + LK+ LYV  +++NLI +  L    Y++     E   D + I + ++ +
Sbjct: 659  IALNFKNNRTLFLKNVLYVPSIRRNLIPISSLSKNGYSV--CFNEFYDDSVVIKFREQMI 716

Query: 414  VEGTEQNGLFVMEPIKAECYLTNAEISN-------------------LWHNRLGNISNIY 292
              G+  + L++++ +  E  LTN+E++N                   LWH RLG+I+   
Sbjct: 717  CSGSLIDSLYILK-VTPELQLTNSEVNNFDIVAPLKRKRPIELSYTYLWHLRLGHIN--- 772

Query: 291  LDKVEAVVYHGP 256
            LD++  +V  GP
Sbjct: 773  LDRISLLVKDGP 784


>gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 822

 Score = 63.2 bits (152), Expect(2) = 1e-14
 Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
 Frame = -3

Query: 217 LAKLHQKPFKNRTRTM-NQCLEIVHSDLCGPITPTTCD*KRYILTFFNDYSKMTWCFLLK 41
           L+K  + PF   + T     LE++HSD+CGP+  ++ +  RYILTF +D ++M W + LK
Sbjct: 199 LSKHSRDPFPKESETRAKHKLELIHSDVCGPMQNSSINGSRYILTFIDDATRMVWVYFLK 258

Query: 40  *KSKVFEIFLMFQ 2
            KS+VF+ F  F+
Sbjct: 259 AKSEVFQTFKKFK 271



 Score = 43.5 bits (101), Expect(2) = 1e-14
 Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
 Frame = -1

Query: 750 KESNKKGE*FLDSGCNSHMTRSKEVFIKFTNTYDEKHVKTAR**TLPVKGYEYITLNFRT 571
           KE +      +DSGC +HMT ++++F K    + +  ++      +  +G   I +  R 
Sbjct: 22  KEPSGGNTWLIDSGCTNHMTPNEKLFTKINRDF-KVPIRVGNGAVMMSEGKGDIEVMTRK 80

Query: 570 SKVILKDALYVEGLQKNLISLYKLIM*KY-----NMFTFLREKLRDMLWIFYNQKFVVEG 406
            K  ++D L V  L KNL+S+ ++I+  Y     N +  + +  R         K + E 
Sbjct: 81  DKRGIRDVLLVPKLGKNLLSVPQMIINGYQVTLKNNYCTIHDSAR---------KKIGEV 131

Query: 405 TEQNGLFVMEPIKAE--CYLTNAEISNLWHNRLGNI--SNIYLDKVEAVVYHGPK 253
              N  F +  +  E    +   E + LWH RLG+   SN+ + + + +V   PK
Sbjct: 132 EMVNKSFHLRWLSNEETAMVAKDEATELWHKRLGHTGHSNLKILQSKEMVTGLPK 186


>gb|ABM55238.1| integrase [Beta vulgaris]
          Length = 1516

 Score = 53.1 bits (126), Expect(2) = 3e-14
 Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = -3

Query: 193 FKNRTR-TMNQCLEIVHSDLCGPITPTTCD*KRYILTFFNDYSKMTWCFLLK*KSKVFEI 17
           FK++T  +  + LE++H DLCGP+   +   KRY+L   +DYS+ TW   L  K + ++ 
Sbjct: 737 FKSKTIVSTTKPLELIHIDLCGPMRIQSRSGKRYVLVIVDDYSRYTWVIFLSSKDETYDE 796

Query: 16  FLMF 5
           FL+F
Sbjct: 797 FLVF 800



 Score = 52.4 bits (124), Expect(2) = 3e-14
 Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 7/157 (4%)
 Frame = -1

Query: 723 FLDSGCNSHMTRSKEVFIKFTNTYDEKHVKTAR**TLPVKGYEYITLNFRTSKV--ILKD 550
           +LDSGC+ HMT  K  F+  T                    YE  ++ F  +K   I+  
Sbjct: 572 YLDSGCSKHMTGDKTKFLSLTT-------------------YEGGSVTFGDNKKGNIVAM 612

Query: 549 ALYVEGLQKNLISLYKLIM*KYNMFTFLREKLRDMLWIFYNQKFVVEGTEQNGLFVME-- 376
              VEGL+ NL+S+ +    K N   F +EK   ++     +K ++EGT +   ++++  
Sbjct: 613 GKVVEGLKHNLLSISQFCD-KGNTVKFDKEKC--LIINIKTKKVILEGTRKGNTYIVDLD 669

Query: 375 ---PIKAECYLTNAEISNLWHNRLGNISNIYLDKVEA 274
               I   C     + S LWH RLG+ S   L+K+ +
Sbjct: 670 LVPQINLTCLSVIEDDSLLWHKRLGHASFSLLEKLRS 706


>gb|ABH08430.1| putative integrase [Beta vulgaris]
          Length = 1516

 Score = 53.1 bits (126), Expect(2) = 3e-14
 Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = -3

Query: 193 FKNRTR-TMNQCLEIVHSDLCGPITPTTCD*KRYILTFFNDYSKMTWCFLLK*KSKVFEI 17
           FK++T  +  + LE++H DLCGP+   +   KRY+L   +DYS+ TW   L  K + ++ 
Sbjct: 737 FKSKTIVSTTKPLELIHIDLCGPMRIQSRSGKRYVLVIVDDYSRYTWVIFLSSKDETYDE 796

Query: 16  FLMF 5
           FL+F
Sbjct: 797 FLVF 800



 Score = 52.4 bits (124), Expect(2) = 3e-14
 Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 7/157 (4%)
 Frame = -1

Query: 723 FLDSGCNSHMTRSKEVFIKFTNTYDEKHVKTAR**TLPVKGYEYITLNFRTSKV--ILKD 550
           +LDSGC+ HMT  K  F+  T                    YE  ++ F  +K   I+  
Sbjct: 572 YLDSGCSKHMTGDKTKFLSLTT-------------------YEGGSVTFGDNKKGNIVAM 612

Query: 549 ALYVEGLQKNLISLYKLIM*KYNMFTFLREKLRDMLWIFYNQKFVVEGTEQNGLFVME-- 376
              VEGL+ NL+S+ +    K N   F +EK   ++     +K ++EGT +   ++++  
Sbjct: 613 GKVVEGLKHNLLSISQFCD-KGNTVKFDKEKC--LIINIKTKKVILEGTRKGNTYIVDLD 669

Query: 375 ---PIKAECYLTNAEISNLWHNRLGNISNIYLDKVEA 274
               I   C     + S LWH RLG+ S   L+K+ +
Sbjct: 670 LVPQINLTCLSVIEDDSLLWHKRLGHASFSLLEKLRS 706


>emb|CAN70616.1| hypothetical protein VITISV_006246 [Vitis vinifera]
          Length = 1011

 Score = 58.2 bits (139), Expect(2) = 1e-13
 Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = -3

Query: 217 LAKLHQKPF-KNRTRTMNQCLEIVHSDLCGPITPTTCD*KRYILTFFNDYSKMTWCFLLK 41
           L K H K F +N ++     LE+VHSD+CGP++  +     Y   F +D S+MTW + LK
Sbjct: 430 LRKQHHKSFPQNMSKRATHKLELVHSDICGPMSTASLSNNVYFALFIDDLSRMTWVYFLK 489

Query: 40  *KSKVFEIFLMFQ 2
            K +V  +F  F+
Sbjct: 490 TKLQVLSVFKSFK 502



 Score = 45.4 bits (106), Expect(2) = 1e-13
 Identities = 28/141 (19%), Positives = 64/141 (45%), Gaps = 1/141 (0%)
 Frame = -1

Query: 720 LDSGCNSHMTRSKEVFIKFTNTYDEKHVKTAR**TLPVKGYEYITLNFRTSKVILKDALY 541
           +D+GC +HMT+   +F     +   K +K      +  KG   I +N +    I+ + LY
Sbjct: 263 IDNGCTNHMTKHLSIFTSIDRSVQPK-IKLGNGEVVQAKGKRTIAINTKRGTKIVTNVLY 321

Query: 540 VEGLQKNLISLYKLIM*KYNMFTFLREKLRDMLWIFYNQKFVVEGTEQNGLFV-MEPIKA 364
           +  L +NL+S+ +++    N +    +++   +   +  K        N  ++ ++ ++ 
Sbjct: 322 IPELDQNLLSVTQMLR---NGYVVSFKEIFCFITDVHGTKIAKIKLNGNSFYLKLDLVEG 378

Query: 363 ECYLTNAEISNLWHNRLGNIS 301
             +    + S +WH R G+ +
Sbjct: 379 HVFYAKIDESVVWHTRYGHFN 399