BLASTX nr result

ID: Ephedra25_contig00022824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00022824
         (405 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF21694.1| NBS-type resistance protein RGC2 [Musa acuminata ...    42   6e-06
gb|ABY75802.1| resistance gene candidate NBS-type protein, parti...    42   6e-06
ref|XP_003626845.1| NBS resistance protein [Medicago truncatula]...    51   7e-06

>gb|ACF21694.1| NBS-type resistance protein RGC2 [Musa acuminata subsp.
           malaccensis]
          Length = 1232

 Score = 42.4 bits (98), Expect(2) = 6e-06
 Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
 Frame = -3

Query: 403 LFDESFIVG-LDAKVSEFRFLVE----AHPRIEAVGMGGTGKTRLLKYVY--KEVESIFD 245
           L  ES IVG    K +  R L+E    A P +  VG+GG GKT L + ++  K VE  F 
Sbjct: 157 LLTESCIVGRAQDKENLIRLLLEPSDGAVPVVPIVGLGGAGKTTLSQLIFNDKRVEEHFP 216

Query: 244 PSIWLCVSQI*DMKSL 197
             +W+CVS   D+K +
Sbjct: 217 LRMWVCVSDDFDVKRI 232



 Score = 33.1 bits (74), Expect(2) = 6e-06
 Identities = 13/30 (43%), Positives = 22/30 (73%)
 Frame = -1

Query: 183 IREEL*EDSCLIVLDDVWSSDPIRIRGLLS 94
           ++EE+   + L+VLDDVW+ DP++   LL+
Sbjct: 258 LKEEIRGTTFLLVLDDVWNEDPVKWESLLA 287


>gb|ABY75802.1| resistance gene candidate NBS-type protein, partial [Musa acuminata
           subsp. malaccensis]
          Length = 366

 Score = 42.4 bits (98), Expect(2) = 6e-06
 Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
 Frame = -3

Query: 403 LFDESFIVG-LDAKVSEFRFLVE----AHPRIEAVGMGGTGKTRLLKYVY--KEVESIFD 245
           L  ES IVG    K +  R L+E    A P +  VG+GG GKT L + ++  K VE  F 
Sbjct: 157 LLTESCIVGRAQDKENLIRLLLEPSDGAVPVVPIVGLGGAGKTTLSQLIFNDKRVEEHFP 216

Query: 244 PSIWLCVSQI*DMKSL 197
             +W+CVS   D+K +
Sbjct: 217 LRMWVCVSDDFDVKRI 232



 Score = 33.1 bits (74), Expect(2) = 6e-06
 Identities = 13/30 (43%), Positives = 22/30 (73%)
 Frame = -1

Query: 183 IREEL*EDSCLIVLDDVWSSDPIRIRGLLS 94
           ++EE+   + L+VLDDVW+ DP++   LL+
Sbjct: 258 LKEEIRGTTFLLVLDDVWNEDPVKWESLLA 287


>ref|XP_003626845.1| NBS resistance protein [Medicago truncatula]
           gi|355520867|gb|AET01321.1| NBS resistance protein
           [Medicago truncatula]
          Length = 901

 Score = 50.8 bits (120), Expect(2) = 7e-06
 Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
 Frame = -3

Query: 385 IVGLDAKVSEFRFLVEAHPR------IEAVGMGGTGKTRLLKYVY--KEVESIFDPSIWL 230
           I+G +    E   L+  H R      I  VG+GG GKT L + VY  KEVE+IF+  IW+
Sbjct: 153 IIGRENNKKEIISLLRQHHRDHNVSLIAIVGIGGLGKTALAQLVYNDKEVENIFEKKIWV 212

Query: 229 CVSQI*DMKSL 197
           CVS+  D+K++
Sbjct: 213 CVSKNFDVKTI 223



 Score = 24.3 bits (51), Expect(2) = 7e-06
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 183 IREEL*EDSCLIVLDDVWS 127
           +R+ L E   L+VLDD+W+
Sbjct: 249 LRQNLSERKYLLVLDDIWN 267


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