BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00022759
         (2968 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Sela...  1417   0.0  
ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Sela...  1410   0.0  
ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi...  1387   0.0  
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A...  1371   0.0  
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...  1300   0.0  
emb|CBI16226.3| unnamed protein product [Vitis vinifera]             1296   0.0  
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...  1288   0.0  
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S...  1281   0.0  
tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family...  1274   0.0  
gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]         1274   0.0  
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g...  1272   0.0  
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s...  1270   0.0  
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s...  1266   0.0  
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s...  1254   0.0  
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [...  1242   0.0  
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s...  1241   0.0  
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s...  1241   0.0  
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s...  1240   0.0  
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s...  1235   0.0  
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s...  1233   0.0  

>ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii]
            gi|300146624|gb|EFJ13293.1| hypothetical protein
            SELMODRAFT_446351 [Selaginella moellendorffii]
          Length = 1393

 Score = 1417 bits (3668), Expect = 0.0
 Identities = 687/952 (72%), Positives = 803/952 (84%), Gaps = 5/952 (0%)
 Frame = -1

Query: 2857 SINFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGILDT 2678
            SINFTK   ++DAGPRKIKS+ F+TMS  E+ K AE+ ++E SL+  P+RKP P+G+LDT
Sbjct: 15   SINFTKGLHLDDAGPRKIKSMRFSTMSSEEVTKTAEVQIFEHSLYQLPERKPLPYGVLDT 74

Query: 2677 HLGTSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICK---SCARV 2507
             LGTS K GQC TC+GK +DCPGH+GYIKL LPVFH+GYFK+I+ ILQCICK   S   V
Sbjct: 75   RLGTSNKKGQCTTCDGKLADCPGHFGYIKLELPVFHIGYFKDIIVILQCICKASFSLLEV 134

Query: 2506 LLFEDDRKLFLRRMRNPRAEVLQKRALFKSINDKCKRVQRCPRCGDYNGTVKKLTSTLRI 2327
            +  +++R+ + RRM+NPR+E+L+K+   K IND CK+V+ CPRCGD NG VKKL STL+I
Sbjct: 135  VASQEERQKWQRRMQNPRSEILRKKEYLKKINDLCKKVRACPRCGDINGVVKKLGSTLKI 194

Query: 2326 THEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDVL 2147
             H+KY+K  +   E   +F +AV+ +KE+K ++  IQ+DLTPLKVL LF K++ EDC VL
Sbjct: 195  IHDKYAKNYEAFEEMAHKFDDAVKVNKEMKGYMKNIQEDLTPLKVLGLFEKIIGEDCVVL 254

Query: 2146 YLHGRPEKLIVTHMAVPPVVIRPSVITDG--GSNEDDITMKLLDIIKTNVRLHTELEAGG 1973
             L  RPE+LIV HM VPPV IRPSV  D   GSNEDD+T+KL+ II+ N ++   LE+G 
Sbjct: 255  DLVDRPEQLIVQHMPVPPVAIRPSVEMDAAVGSNEDDVTIKLMHIIEQNNQIRACLESGL 314

Query: 1972 QITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRGFVQRLKGKQGRFRGNLSGKR 1793
             I  CME WD LQ+QV +YINS+LPGLP +M   GKP+RGFVQRLKGKQGRFRGNLSGKR
Sbjct: 315  SIAKCMEIWDFLQIQVAMYINSELPGLPPNM-QTGKPLRGFVQRLKGKQGRFRGNLSGKR 373

Query: 1792 VDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYNIEKLRQRVSNGPQKYPGANY 1613
            VDFTGRTVISPDPNLKV+EVAVP+LMA  LTYPEKVS +NIEKLRQRV NG +K+PGAN+
Sbjct: 374  VDFTGRTVISPDPNLKVSEVAVPILMAQTLTYPEKVSAHNIEKLRQRVINGKEKHPGANF 433

Query: 1612 IISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSLHRMSIMSHRARVM 1433
            ++  DG ++ ++ G+ +R+A+ELKYG +VERHLEDGDIVLFNRQPSLHRMSIM HRARVM
Sbjct: 434  VVFPDGVKRFLKFGDRKRIASELKYGDVVERHLEDGDIVLFNRQPSLHRMSIMCHRARVM 493

Query: 1432 PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNNLCTPKNGDILVAS 1253
            PWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL+LMG+QNNLCTPKNG+ILVAS
Sbjct: 494  PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALTLMGVQNNLCTPKNGEILVAS 553

Query: 1252 TQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKPIELWTGKQLFSVL 1073
            TQDFLTSSFLITR+DTFYDR  F LMCSYMGD  EHIDLPTPAILKP+ELWTGKQLF VL
Sbjct: 554  TQDFLTSSFLITRRDTFYDRGQFALMCSYMGDAVEHIDLPTPAILKPVELWTGKQLFGVL 613

Query: 1072 VRPNAKMRVFVNFIVMEKNYSKTGETMCPNDGCVYFRNSELISGQLGKATLGNGNKSGLF 893
            +RP+A+++VF+NF+V EKN+ K  ETMCP DG V+F+NSELI GQLGK TLGNG+K GLF
Sbjct: 614  IRPSARIKVFLNFVVCEKNHKKGTETMCPKDGYVFFKNSELICGQLGKGTLGNGSKDGLF 673

Query: 892  SVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGARLTAKKEERVTEGYNKC 713
            +VLLRDY   AAASCMNRLAKLSARWIGNHGFSIGIDDVQPG+RLT +KE+R+ EGY  C
Sbjct: 674  TVLLRDYGEQAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGSRLTVEKEKRIAEGYRAC 733

Query: 712  DKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGSVCLRELHWRNSPLIMSQCG 533
            DKHI L+NKG+L LQPGC+AAQTLE+EITGELNKIRE AG VC+ ELHWRNSPLIMSQCG
Sbjct: 734  DKHISLFNKGQLTLQPGCDAAQTLESEITGELNKIREAAGQVCVNELHWRNSPLIMSQCG 793

Query: 532  SKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKKPAAKGFVANSFYTGLTA 353
            SKGS INISQMIACVGQQSV G RAPNGFI+RSLPHFPRNDK P AKGFVANSFY+GLTA
Sbjct: 794  SKGSVINISQMIACVGQQSVSGHRAPNGFIERSLPHFPRNDKTPQAKGFVANSFYSGLTA 853

Query: 352  TEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDGTVRSANSAIVQFLYGD 173
            TEF FHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLS  YDGTVR+++  IVQ +YGD
Sbjct: 854  TEFIFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSCQYDGTVRNSSGVIVQLIYGD 913

Query: 172  DAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSSALSVSELSKRVDERLSK 17
            D+MDPV MEG++G PLNLDR+LMK KATCP   + AL  SEL K V+ + S+
Sbjct: 914  DSMDPVSMEGQNGTPLNLDRVLMKAKATCPRGTTPALPPSELWKIVESKFSQ 965


>ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Selaginella moellendorffii]
            gi|300158014|gb|EFJ24638.1| hypothetical protein
            SELMODRAFT_442419 [Selaginella moellendorffii]
          Length = 1348

 Score = 1410 bits (3649), Expect = 0.0
 Identities = 686/956 (71%), Positives = 802/956 (83%), Gaps = 9/956 (0%)
 Frame = -1

Query: 2857 SINFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGILDT 2678
            SINFTK   ++DAGPRKIKS+ F+TMS  E+ K AE+ ++E SL+  P+RKP P+G+LDT
Sbjct: 15   SINFTKGLHLDDAGPRKIKSMRFSTMSSEEVTKTAEVQIFEHSLYQLPERKPLPYGVLDT 74

Query: 2677 HLGTSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICK---SCARV 2507
             LGTS K GQC TC+GK +DCPGH+GYIKL LPVFH+GYFK+I+ ILQCICK   S   V
Sbjct: 75   RLGTSNKKGQCTTCDGKLADCPGHFGYIKLELPVFHIGYFKDIIVILQCICKASFSFLEV 134

Query: 2506 LLFEDDRKLFLRRMRNPRAEVLQKRALFKSINDKCKRVQRCPRCGDYNGTVKKLTSTLRI 2327
            +  +++R+ + RRM+NPR+E+L+K+   K IND CK+V+ CPRCGD NG VKKL STL+I
Sbjct: 135  VASQEERQKWQRRMQNPRSEILRKKEYLKKINDLCKKVRACPRCGDINGVVKKLGSTLKI 194

Query: 2326 THEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDVL 2147
             H+KY+K  +   E   +F +AV+ +KE+K ++  IQ+DLTPLKVL LF K++ EDC VL
Sbjct: 195  IHDKYAKNYEAFEEMAHKFDDAVKVNKEMKGYMKNIQEDLTPLKVLGLFEKIIGEDCVVL 254

Query: 2146 YLHGRPEKLIVTHMAVPPVVIRPSVITDG--GSNEDDITMKLLDIIKTNVRLHTELEAGG 1973
             L  RPE+LIV HM VPPV IRPSV  D   GSNEDD+T+KL+ II+ N ++   LE+G 
Sbjct: 255  DLVDRPEQLIVQHMPVPPVAIRPSVEMDAAVGSNEDDVTIKLMHIIEQNNQIRACLESGL 314

Query: 1972 QITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRGFVQRLKGKQGRFRGNLSGKR 1793
             I  CME WD LQ+QV +YINS+LPGLP +M   GKP+RGFVQRLKGKQGRFRGNLSGKR
Sbjct: 315  SIAKCMEIWDFLQIQVAMYINSELPGLPPNM-QTGKPLRGFVQRLKGKQGRFRGNLSGKR 373

Query: 1792 VDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYNIEKLRQRVSNGPQKYPGANY 1613
            VDFTGRTVISPDPNLKV+EVAVP+LMA  LTYPEKVS +NIEKLRQRV NG +K+PGAN+
Sbjct: 374  VDFTGRTVISPDPNLKVSEVAVPILMAQTLTYPEKVSAHNIEKLRQRVINGKEKHPGANF 433

Query: 1612 IISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSLHRMSIMSHRARVM 1433
            ++  DG ++ ++ G+ +R+A+ELKYG +VERHLEDGDIVLFNRQPSLHRMSIM HRARVM
Sbjct: 434  VVFPDGVKRFLKFGDRKRIASELKYGDVVERHLEDGDIVLFNRQPSLHRMSIMCHRARVM 493

Query: 1432 PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNNLCTPKNGDILVAS 1253
            PWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL+LMG+QNNLCTPKNG+ILVAS
Sbjct: 494  PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALTLMGVQNNLCTPKNGEILVAS 553

Query: 1252 TQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKPIELWTGKQLFSVL 1073
            TQDFLTSSFLITR+DTFYDR  F LMCSYMGD  EHIDLPTPAILKP+ELWTGKQLF VL
Sbjct: 554  TQDFLTSSFLITRRDTFYDRGQFALMCSYMGDAVEHIDLPTPAILKPVELWTGKQLFGVL 613

Query: 1072 VRPNAKMRVFVNFIVMEKNYSKTGETMCPNDGCVYFRNSELISGQLGKATLGNGNKSGLF 893
            +RP+A+++VF+NF+V EKN+ K  ETMCP DG V+F+NSELI GQLGK TLGNG+K GLF
Sbjct: 614  IRPSARIKVFLNFVVCEKNHKKGTETMCPKDGYVFFKNSELICGQLGKGTLGNGSKDGLF 673

Query: 892  SVLLRDYNAYAAASCMNRLAKLS----ARWIGNHGFSIGIDDVQPGARLTAKKEERVTEG 725
            +VLLRDY   AAASCMNRLAKL     ARWIGNHGFSIGIDDVQPG+RLT +KE+R+ EG
Sbjct: 674  TVLLRDYGEQAAASCMNRLAKLRHSYFARWIGNHGFSIGIDDVQPGSRLTVEKEKRIAEG 733

Query: 724  YNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGSVCLRELHWRNSPLIM 545
            Y  CDKHI L+NKG+L LQPGC+AAQTLE+EITGELNKIRE AG VC+ ELHWRNSPLIM
Sbjct: 734  YRACDKHISLFNKGQLTLQPGCDAAQTLESEITGELNKIREAAGQVCVNELHWRNSPLIM 793

Query: 544  SQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKKPAAKGFVANSFYT 365
            SQCGSKGS INISQMIACVGQQSV G RAPNGFI+RSLPHFPRNDK P AKGFVANSFY+
Sbjct: 794  SQCGSKGSVINISQMIACVGQQSVSGHRAPNGFIERSLPHFPRNDKTPQAKGFVANSFYS 853

Query: 364  GLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDGTVRSANSAIVQF 185
            GLTATEF FHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLS  YDGTVR+++  IVQ 
Sbjct: 854  GLTATEFIFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSCQYDGTVRNSSGVIVQL 913

Query: 184  LYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSSALSVSELSKRVDERLSK 17
            +YGDD+MDPV MEG++G PLNLDR+LMK KATCP   + AL  SEL K V+ + S+
Sbjct: 914  IYGDDSMDPVSMEGQNGTPLNLDRVLMKAKATCPRGATPALPPSELWKIVESKFSQ 969


>ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi|162691719|gb|EDQ78080.1|
            predicted protein [Physcomitrella patens]
          Length = 1397

 Score = 1387 bits (3589), Expect = 0.0
 Identities = 677/955 (70%), Positives = 786/955 (82%), Gaps = 5/955 (0%)
 Frame = -1

Query: 2857 SINFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGILDT 2678
            SINF+K+PFIED GPRKI+S+ F TMS  +IVKA+ELHVYE+ L+  P+R P P+ ++DT
Sbjct: 11   SINFSKRPFIEDVGPRKIESIRFGTMSKQDIVKASELHVYESMLYTMPERNPAPYSVVDT 70

Query: 2677 HLGTSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARVLLF 2498
             LGT+ K G+C+TC GK +DCPGH+G+ KL +PVFH+GY KNIL ILQCICKSCAR+L+ 
Sbjct: 71   RLGTTNKKGECSTCFGKLADCPGHFGHTKLEMPVFHIGYLKNILQILQCICKSCARILMP 130

Query: 2497 EDDRKLFLRRMRNPRAEVLQKRALFKSINDKCKRVQRCPRCGDYNGTVKKLTST-LRITH 2321
            E++ KL LR+MRNPR EVLQ+RA+ K + D+CKRV+ C RCGDYNG VKK+    +++ H
Sbjct: 131  EEECKLILRKMRNPRIEVLQRRAVLKKVIDRCKRVRVCTRCGDYNGVVKKMAQPPVKLIH 190

Query: 2320 EKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDVLYL 2141
            +KY KA D++ E +    +A++   ELK  +NR+ D+L P++VL LF  M+++DC+VL L
Sbjct: 191  DKYGKALDLKEEMIVSLEDAMKCKPELKNCINRVYDNLDPMRVLQLFESMIEQDCEVLDL 250

Query: 2140 HGRPEKLIVTHMAVPPVVIRPSVITDG--GSNEDDITMKLLDIIKTNVRLHTELEAGGQI 1967
              RPEKLIVTH+ VPPV IRPSV  +   GSNEDDIT++LL I+  N  L T +E G   
Sbjct: 251  AERPEKLIVTHLIVPPVAIRPSVEMESAAGSNEDDITVRLLGILNCNNSLRTCVEQGLAA 310

Query: 1966 THCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRGFVQRLKGKQGRFRGNLSGKRVD 1787
               ME W+LLQ QV   INS+ P   S     GK  RGFVQRLKGKQGRFRGNLSGKRVD
Sbjct: 311  EKTMETWELLQSQVSQLINSETPVPRSEQPTSGKQPRGFVQRLKGKQGRFRGNLSGKRVD 370

Query: 1786 FTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYNIEKLRQRVSNGPQKYPGANYII 1607
            FTGRTVISPDPNLK+TEVAVP+LMA +LTYPEKVSRYNI+KLR R+ NG  K+PGAN+II
Sbjct: 371  FTGRTVISPDPNLKITEVAVPLLMAQLLTYPEKVSRYNIDKLRGRIINGMTKHPGANFII 430

Query: 1606 SMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSLHRMSIMSHRARVMPW 1427
              DG++  ++ G+ RR AAELKYG IVERHLEDGDIVLFNRQPSLHRMSIMSHRAR+MPW
Sbjct: 431  FPDGNKLYLKFGDRRRYAAELKYGDIVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPW 490

Query: 1426 RTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNNLCTPKNGDILVASTQ 1247
            RTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAL LMG+ NNLCTPKNG+ILVASTQ
Sbjct: 491  RTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVANNLCTPKNGEILVASTQ 550

Query: 1246 DFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKPIELWTGKQLFSVLVR 1067
            DFLTSS+L TRKDTFYDR  F   C YMGD +E+IDLPTP+I+KP+ELWTGKQLFSVLVR
Sbjct: 551  DFLTSSYLFTRKDTFYDRATFTQACVYMGDAAENIDLPTPSIIKPMELWTGKQLFSVLVR 610

Query: 1066 PNAKMRVFVNFIVMEKNYSKTGE--TMCPNDGCVYFRNSELISGQLGKATLGNGNKSGLF 893
            PNAK RVFVN +  EKNY K     +MCP DG VYFRNSELI GQLGKATLGNGNK GLF
Sbjct: 611  PNAKTRVFVNLVSYEKNYDKKANKGSMCPTDGYVYFRNSELICGQLGKATLGNGNKDGLF 670

Query: 892  SVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGARLTAKKEERVTEGYNKC 713
            +VLLRDY   AAA CMNRLAKLSARWIGNHGFSIGIDDV P  RL  +KE+++T+GYN C
Sbjct: 671  TVLLRDYGNEAAAVCMNRLAKLSARWIGNHGFSIGIDDVAPSDRLNREKEKQITKGYNAC 730

Query: 712  DKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGSVCLRELHWRNSPLIMSQCG 533
            D+HI LY KGKL LQPGCNAAQTLE+ +TGELNKIRE AG+VC  ELHWRNSPLIMS+CG
Sbjct: 731  DQHIQLYKKGKLELQPGCNAAQTLESAVTGELNKIREAAGNVCKDELHWRNSPLIMSECG 790

Query: 532  SKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKKPAAKGFVANSFYTGLTA 353
            SKGS INISQM+ACVGQQSVGG+RAPNGFIDR+LPHFPR+D+ P  KGFVANSFY+GL+A
Sbjct: 791  SKGSFINISQMVACVGQQSVGGKRAPNGFIDRTLPHFPRHDRTPQGKGFVANSFYSGLSA 850

Query: 352  TEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDGTVRSANSAIVQFLYGD 173
            TEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLS  YDGTVR+++  IVQ LYGD
Sbjct: 851  TEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSAQYDGTVRNSSGGIVQLLYGD 910

Query: 172  DAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSSALSVSELSKRVDERLSKHDM 8
            D MDPV+MEGKDG P NLDR+LMKTKATCP+ G   L  +E+ K  +ERL+K DM
Sbjct: 911  DGMDPVYMEGKDGAPFNLDRMLMKTKATCPSYGQLGLPPTEIEKLFNERLTKPDM 965


>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
            gi|548832896|gb|ERM95665.1| hypothetical protein
            AMTR_s00023p00196820 [Amborella trichopoda]
          Length = 1383

 Score = 1371 bits (3549), Expect = 0.0
 Identities = 677/952 (71%), Positives = 780/952 (81%)
 Frame = -1

Query: 2857 SINFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGILDT 2678
            + NFTK+PF+ED GPRKIKSV F  +SG EIVKAAE  VY+   +   D KP  HG+LDT
Sbjct: 7    AFNFTKKPFVEDIGPRKIKSVQFCMLSGPEIVKAAETQVYKRDYYNRTDLKPAEHGVLDT 66

Query: 2677 HLGTSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARVLLF 2498
             +G S K G CATC G F  CPGH+GY+KLALPVFHVGYF+  + +LQCICKSCAR+LLF
Sbjct: 67   RMGFSTKSGSCATCFGDFQTCPGHFGYLKLALPVFHVGYFRTTIIVLQCICKSCARILLF 126

Query: 2497 EDDRKLFLRRMRNPRAEVLQKRALFKSINDKCKRVQRCPRCGDYNGTVKKLTSTLRITHE 2318
            E++RK FL+++RNPRAE+ QK    K + DKCKRV+ CPRCGDYNG VKK   T RI+H+
Sbjct: 127  EEERKQFLKKIRNPRAELHQKNDFVKKVIDKCKRVRICPRCGDYNGVVKKAGPTFRISHD 186

Query: 2317 KYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDVLYLH 2138
            + SKA     +   E   A+ Q K   +  N +++ LTP + L LF +MVDEDCD+LYL+
Sbjct: 187  R-SKAN--YDKLTKECKTAISQTKYSNSDFNMVEN-LTPQRALALFERMVDEDCDLLYLY 242

Query: 2137 GRPEKLIVTHMAVPPVVIRPSVITDGGSNEDDITMKLLDIIKTNVRLHTELEAGGQITHC 1958
             RPEKLI+TH+AVPP  IRP+  +    NE+++T KL +I++ N  L   +  G    + 
Sbjct: 243  DRPEKLIITHIAVPPAGIRPTYQSGSRLNENELTTKLWEIVQINHTLIDHVNKGNLPQYY 302

Query: 1957 MEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRGFVQRLKGKQGRFRGNLSGKRVDFTG 1778
            M+ W LLQV+V LYINS+LP LP +  P  K   G VQRLKGKQGRFR NL GKRVDFTG
Sbjct: 303  MDTWVLLQVRVALYINSELPSLPLNYQPS-KFEGGLVQRLKGKQGRFRSNLEGKRVDFTG 361

Query: 1777 RTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYNIEKLRQRVSNGPQKYPGANYIISMD 1598
            RTVISPDPNLK+TEVA+P LMA +LTY E+V+ +NIEKLRQ V NGP KYPGAN++IS  
Sbjct: 362  RTVISPDPNLKITEVAIPRLMAQILTYKERVTIHNIEKLRQCVRNGPVKYPGANFVIS-G 420

Query: 1597 GSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSLHRMSIMSHRARVMPWRTL 1418
            G   S+R+GN +R A ELK+G  VERHLEDG+IVLFNRQPSLHRMSIM HRARVMPWRTL
Sbjct: 421  GDTLSLRYGNKKRKADELKFGDFVERHLEDGEIVLFNRQPSLHRMSIMCHRARVMPWRTL 480

Query: 1417 RFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNNLCTPKNGDILVASTQDFL 1238
            RFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL LMG+Q+NLCTPKNG+ILVASTQDFL
Sbjct: 481  RFNESVCNPYNADFDGDEMNIHVPQTEEARTEALMLMGVQHNLCTPKNGEILVASTQDFL 540

Query: 1237 TSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKPIELWTGKQLFSVLVRPNA 1058
            TSS+LITRKDTFYDR  F LMCSYMGDG E+IDLPTPA+LKP+ELWTGKQLFSVL+RP+A
Sbjct: 541  TSSYLITRKDTFYDRATFSLMCSYMGDGMENIDLPTPALLKPVELWTGKQLFSVLIRPHA 600

Query: 1057 KMRVFVNFIVMEKNYSKTGETMCPNDGCVYFRNSELISGQLGKATLGNGNKSGLFSVLLR 878
             M+V+VN  +MEKNYSK GETMC NDG VY RNSELISGQLGKATLGNGNK GLFSVLLR
Sbjct: 601  HMKVYVNLSLMEKNYSKGGETMCANDGFVYIRNSELISGQLGKATLGNGNKDGLFSVLLR 660

Query: 877  DYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGARLTAKKEERVTEGYNKCDKHID 698
            DYN++AAASCMNRLAKLSARWIGNHGFSIGIDDV PG+ LT +KEE++  GY+ CD  ID
Sbjct: 661  DYNSHAAASCMNRLAKLSARWIGNHGFSIGIDDVLPGSHLTKQKEEQIKGGYSNCDAFID 720

Query: 697  LYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGSVCLRELHWRNSPLIMSQCGSKGSP 518
             Y+KGKL+L+PGCNAAQTLEAEIT  LN IR+ A  VC+ ELHWRNSPLIMSQCGSKGSP
Sbjct: 721  AYDKGKLSLKPGCNAAQTLEAEITRVLNGIRDAAAKVCMEELHWRNSPLIMSQCGSKGSP 780

Query: 517  INISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKKPAAKGFVANSFYTGLTATEFFF 338
            INISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDK PAAKGFVANSFYTGLTA EFFF
Sbjct: 781  INISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKTPAAKGFVANSFYTGLTAAEFFF 840

Query: 337  HTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDGTVRSANSAIVQFLYGDDAMDP 158
            HTMGGREGLVDTAVKTA+TGY+SRRL+K+LEDLSTHYD TVR+++  I+QF YGDD MDP
Sbjct: 841  HTMGGREGLVDTAVKTADTGYLSRRLIKSLEDLSTHYDDTVRNSSGTIIQFSYGDDGMDP 900

Query: 157  VHMEGKDGEPLNLDRLLMKTKATCPANGSSALSVSELSKRVDERLSKHDMQP 2
              MEGK G PLNLDRL MK KATCPA+ S++LS SE+S  V++RLSKHDM P
Sbjct: 901  AKMEGKSGVPLNLDRLFMKIKATCPASVSASLSPSEISTIVNDRLSKHDMTP 952


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
            vinifera]
          Length = 1383

 Score = 1300 bits (3363), Expect = 0.0
 Identities = 649/958 (67%), Positives = 764/958 (79%), Gaps = 10/958 (1%)
 Frame = -1

Query: 2854 INFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGILDTH 2675
            I FTK+P+IED GPRKI+S+ F   S +EI KAAE+ V+   ++   +RKP  +G+LD  
Sbjct: 5    IQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWR-GVYYDANRKPIENGLLDPR 63

Query: 2674 LGTSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARVLLFE 2495
            +G + K G CATC G F DCPGH GY+ LALPV++VGY   I++IL+CICKSC+RVLL E
Sbjct: 64   MGPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDE 123

Query: 2494 DDRKLFLRRMRNPRAEVLQKRALFKSINDKC------KRVQRCPRCGDYNGTVKKLTSTL 2333
               K +L++MR+ + E L+K  L K I  KC      K+  +C RCG  NG VKK  S L
Sbjct: 124  KASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMASSKKAVKCSRCGYMNGIVKKAVSVL 183

Query: 2332 RITHEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCD 2153
             I H++   A+      L E + A+   KE KA  + + D L P+KVL+LF +M+DEDCD
Sbjct: 184  GIIHDRSKIADGS----LEECSSAISHTKESKASFS-VVDILNPVKVLSLFKRMMDEDCD 238

Query: 2152 VLYLHGRPEKLIVTHMAVPPVVIRPSVITDGG--SNEDDITMKLLDIIKTNVRLHTELEA 1979
            +L L  RPEKL++T++ VPP+ IRPSV  DGG  SNE+D+T +L  II+ N  LH EL+ 
Sbjct: 239  LLNLAERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQD 298

Query: 1978 GGQITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRGFVQRLKGKQGRFRGNLSG 1799
             G  + C+  WD LQ++V  YINSD+ G+P +M    +P+ GFVQRLKGKQGRFRGNLSG
Sbjct: 299  TGSTSKCLAGWDYLQIEVAQYINSDVRGVPLAM-QAARPLSGFVQRLKGKQGRFRGNLSG 357

Query: 1798 KRVDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYNIEKLRQRVSNGPQKYPGA 1619
            KRV++TGRTVISPDPNLK+TEVA+P+LMA +L+YPE+VS +NIEKLRQ + NGP KYPGA
Sbjct: 358  KRVEYTGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGA 417

Query: 1618 NYIISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSLHRMSIMSHRAR 1439
              I   DGS +S+     +R A ELKYG IVERHLEDGD+VLFNRQPSLHRMSIM HRAR
Sbjct: 418  KLIRYPDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRAR 477

Query: 1438 VMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNNLCTPKNGDILV 1259
            +MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL LMG+QNNLCTPKNG+ILV
Sbjct: 478  IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILV 537

Query: 1258 ASTQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKPIELWTGKQLFS 1079
            ASTQDFLTSSFLITRKDTFYDR AF LMCSYMGDG + +DLPTPAI+KP+ELWTGKQLF+
Sbjct: 538  ASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKPVELWTGKQLFN 597

Query: 1078 VLVRPNAKMRVFVNFIVMEKNYSKTG--ETMCPNDGCVYFRNSELISGQLGKATLGNGNK 905
            VL+RP+A +RV++N  VMEK Y+K    ETMCP+DG VYFRNSELISGQLGKATLGNGNK
Sbjct: 598  VLLRPHANVRVYLNLTVMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNK 657

Query: 904  SGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGARLTAKKEERVTEG 725
             GLFSVLLRDYNA+AAA+CMNRLAKLSARWIGNHGFSIGIDDVQPG  L  +K +R+ EG
Sbjct: 658  DGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEG 717

Query: 724  YNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGSVCLRELHWRNSPLIM 545
            Y  C + I  YNKGKL LQPGCNAAQTLEAEITG LNKIRE   +VC+ ELHWRNSPLIM
Sbjct: 718  YENCHELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIM 777

Query: 544  SQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKKPAAKGFVANSFYT 365
            SQCGSKGSPINISQMIACVGQQSVGGRRAP+GFIDR+LPHFPR  K P AKGFVA+SFYT
Sbjct: 778  SQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYT 837

Query: 364  GLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDGTVRSANSAIVQF 185
            GLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRLMKALEDLS  YD TVR+AN +IVQF
Sbjct: 838  GLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQF 897

Query: 184  LYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSSALSVSELSKRVDERLSKHD 11
            LYGDD MDP  MEGKDG PLN +RL +K KATCPA  +++LS  ++ + V +RL +H+
Sbjct: 898  LYGDDGMDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQIEETV-KRLKEHN 954


>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score = 1296 bits (3353), Expect = 0.0
 Identities = 648/958 (67%), Positives = 763/958 (79%), Gaps = 10/958 (1%)
 Frame = -1

Query: 2854 INFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGILDTH 2675
            I FTK+P+IED GPRKI+S+ F   S +EI KAAE+ V+   ++   +RKP  +G+LD  
Sbjct: 5    IQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWR-GVYYDANRKPIENGLLDPR 63

Query: 2674 LGTSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARVLLFE 2495
            +G + K G CATC G F DCPGH GY+ LALPV++VGY   I++IL+CICKSC+RVLL E
Sbjct: 64   MGPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDE 123

Query: 2494 DDRKLFLRRMRNPRAEVLQKRALFKSINDKC------KRVQRCPRCGDYNGTVKKLTSTL 2333
               K +L++MR+ + E L+K  L K I  KC      K+  +C RCG  NG VKK  S L
Sbjct: 124  KASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMASSKKAVKCSRCGYMNGIVKKAVSVL 183

Query: 2332 RITHEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCD 2153
             I H++   A+      L E + A+   KE KA  + + D L P+KVL+LF +M+DEDCD
Sbjct: 184  GIIHDRSKIADGS----LEECSSAISHTKESKASFS-VVDILNPVKVLSLFKRMMDEDCD 238

Query: 2152 VLYLHGRPEKLIVTHMAVPPVVIRPSVITDGG--SNEDDITMKLLDIIKTNVRLHTELEA 1979
            +L L  RPEKL++T++ VPP+ IRPSV  DGG  SNE+D+T +L  II+ N  LH EL+ 
Sbjct: 239  LLNLAERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQD 298

Query: 1978 GGQITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRGFVQRLKGKQGRFRGNLSG 1799
             G  + C+  WD LQ++V  YINSD+ G+P +M    +P+ GFVQRLKGKQGRFRGNLSG
Sbjct: 299  TGSTSKCLAGWDYLQIEVAQYINSDVRGVPLAM-QAARPLSGFVQRLKGKQGRFRGNLSG 357

Query: 1798 KRVDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYNIEKLRQRVSNGPQKYPGA 1619
            KRV++TGRTVISPDPNLK+TEVA+P+LMA +L+YPE+VS +NIEKLRQ + NGP KYPGA
Sbjct: 358  KRVEYTGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGA 417

Query: 1618 NYIISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSLHRMSIMSHRAR 1439
              I   DGS +S+     +R A ELKYG IVERHLEDGD+VLFNRQPSLHRMSIM HRAR
Sbjct: 418  KLIRYPDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRAR 477

Query: 1438 VMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNNLCTPKNGDILV 1259
            +MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL LMG+QNNLCTPKNG+ILV
Sbjct: 478  IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILV 537

Query: 1258 ASTQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKPIELWTGKQLFS 1079
            ASTQDFLTSSFLITRKDTFYDR AF LMCSYMGDG + +DLPTPAI+K +ELWTGKQLF+
Sbjct: 538  ASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKAMELWTGKQLFN 597

Query: 1078 VLVRPNAKMRVFVNFIVMEKNYSKTG--ETMCPNDGCVYFRNSELISGQLGKATLGNGNK 905
            VL+RP+A +RV++N  VMEK Y+K    ETMCP+DG VYFRNSELISGQLGKATLGNGNK
Sbjct: 598  VLLRPHANVRVYLNLTVMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNK 657

Query: 904  SGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGARLTAKKEERVTEG 725
             GLFSVLLRDYNA+AAA+CMNRLAKLSARWIGNHGFSIGIDDVQPG  L  +K +R+ EG
Sbjct: 658  DGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEG 717

Query: 724  YNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGSVCLRELHWRNSPLIM 545
            Y  C + I  YNKGKL LQPGCNAAQTLEAEITG LNKIRE   +VC+ ELHWRNSPLIM
Sbjct: 718  YENCHELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIM 777

Query: 544  SQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKKPAAKGFVANSFYT 365
            SQCGSKGSPINISQMIACVGQQSVGGRRAP+GFIDR+LPHFPR  K P AKGFVA+SFYT
Sbjct: 778  SQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYT 837

Query: 364  GLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDGTVRSANSAIVQF 185
            GLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRLMKALEDLS  YD TVR+AN +IVQF
Sbjct: 838  GLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQF 897

Query: 184  LYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSSALSVSELSKRVDERLSKHD 11
            LYGDD MDP  MEGKDG PLN +RL +K KATCPA  +++LS  ++ + V +RL +H+
Sbjct: 898  LYGDDGMDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQIEETV-KRLKEHN 954


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
            sativus]
          Length = 1400

 Score = 1288 bits (3334), Expect = 0.0
 Identities = 650/962 (67%), Positives = 752/962 (78%), Gaps = 13/962 (1%)
 Frame = -1

Query: 2848 FTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGILDTHLG 2669
            FTKQP+IED GPRKIKS+ FTT SGAEI K AE+ VY+  L+    RKP   G+LD  +G
Sbjct: 11   FTKQPYIEDVGPRKIKSMQFTTFSGAEISKLAEVQVYK-GLYYDTTRKPIDGGLLDPRMG 69

Query: 2668 TSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARVLLFEDD 2489
             + K  +CATC+  F DCPGHYGY+ LALPVF+VGYF  IL IL+CICKSC+R+LL E  
Sbjct: 70   PANKGCKCATCHANFGDCPGHYGYVNLALPVFNVGYFTTILEILKCICKSCSRILLEEKL 129

Query: 2488 RKLFLRRMRNPRAEVLQKRALFKSINDKCKRVQ------RCPRCGDYNGTVKKLTSTLRI 2327
             K FLR+MRNP+ E L+K  L K I  KC  +       RC RCG  NG+VKK  S L I
Sbjct: 130  FKDFLRKMRNPKLEALRKVDLVKKIIKKCSTLTTGNKSTRCSRCGYLNGSVKKAVSMLGI 189

Query: 2326 THEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDVL 2147
             H            Y +   +A    ++L+A  N   D L P +VL LF +M DEDC++L
Sbjct: 190  LH------------YRARSKDAGVVSEDLRAPYNVSNDILNPFRVLCLFQRMSDEDCELL 237

Query: 2146 YLHGRPEKLIVTHMAVPPVVIRPSVITDGG-SNEDDITMKLLDIIKTNVRLHTELEAGGQ 1970
            +L  RPEKLI+T++ VPP+ IRPSVI DG  SNE+DIT +L  II+ N  +  EL     
Sbjct: 238  FLSNRPEKLIITNVLVPPIAIRPSVIMDGSQSNENDITERLKRIIQQNASVSQELSTSNS 297

Query: 1969 ITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRGFVQRLKGKQGRFRGNLSGKRV 1790
               C+E+WD+LQ +V   INSD+ G+P SM    KP+ GFVQRLKGKQGRFRGNL GKRV
Sbjct: 298  QAKCLESWDMLQSEVAQLINSDVRGIPFSM-QVSKPLAGFVQRLKGKQGRFRGNLCGKRV 356

Query: 1789 DFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYNIEKLRQRVSNGPQKYPGANYI 1610
            +FTGRTVISPDPNLK+TEVAVP+ MA +LTYPE+V+R+NIEKLRQ VSNGP KYPGA  +
Sbjct: 357  EFTGRTVISPDPNLKITEVAVPIHMARILTYPERVTRHNIEKLRQCVSNGPDKYPGARML 416

Query: 1609 ISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSLHRMSIMSHRARVMP 1430
              +DGS +S+     +RLA ELKYG IVERHLEDGD+VLFNRQPSLHRMSIM HR RVMP
Sbjct: 417  RHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMP 476

Query: 1429 WRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNNLCTPKNGDILVAST 1250
            WRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA+ LMG+QNNLCTPKNG+ILVAST
Sbjct: 477  WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVAST 536

Query: 1249 QDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKPIELWTGKQLFSVLV 1070
            QDFLTSSFLITRKDTFYDR AF LMCSYMGDG + +DLPTPA++KPIELWTGKQLFSVLV
Sbjct: 537  QDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALVKPIELWTGKQLFSVLV 596

Query: 1069 RPNAKMRVFVNFIVMEKNYSKTG------ETMCPNDGCVYFRNSELISGQLGKATLGNGN 908
            RP+A M+V++N  V EK+YSK        ETMCPNDG VYFRNSELISGQ+GKATLGNGN
Sbjct: 597  RPHASMKVYLNLTVKEKSYSKVKGNEKERETMCPNDGFVYFRNSELISGQVGKATLGNGN 656

Query: 907  KSGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGARLTAKKEERVTE 728
            K GL+SVLLRDY A+AAA CMNRLAKLSARWIGNHGFSIGIDDVQPG +L  KK+  + E
Sbjct: 657  KDGLYSVLLRDYKAHAAAVCMNRLAKLSARWIGNHGFSIGIDDVQPGDQLVKKKQTTILE 716

Query: 727  GYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGSVCLRELHWRNSPLI 548
            GY  CDK I+L+N G L  + GC+AAQ+LE++IT  LN IRE   +VC++ LHWRNSPLI
Sbjct: 717  GYRDCDKQINLFNTGNLPPEAGCDAAQSLESKITQILNGIREATANVCMQNLHWRNSPLI 776

Query: 547  MSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKKPAAKGFVANSFY 368
            MSQCGSKGSPINISQM+ACVGQQSVGGRRAP+GFIDRSLPHF R  K PAAKGFVANSFY
Sbjct: 777  MSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRSLPHFRRKAKTPAAKGFVANSFY 836

Query: 367  TGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDGTVRSANSAIVQ 188
            +GLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+KALEDLS HYD +VR+A   IVQ
Sbjct: 837  SGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSSVRNAGGCIVQ 896

Query: 187  FLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSSALSVSELSKRVDERLSKHDM 8
            F YGDD MDP  MEGK G PLN +RL +K KATCP++G+  LS SE S+ V++RLSK D 
Sbjct: 897  FCYGDDGMDPAQMEGKSGAPLNFERLFLKAKATCPSDGNKILSPSEFSETVEDRLSKDDA 956

Query: 7    QP 2
             P
Sbjct: 957  SP 958


>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
            gi|241937900|gb|EES11045.1| hypothetical protein
            SORBIDRAFT_06g021120 [Sorghum bicolor]
          Length = 1391

 Score = 1281 bits (3316), Expect = 0.0
 Identities = 643/967 (66%), Positives = 754/967 (77%), Gaps = 15/967 (1%)
 Frame = -1

Query: 2866 PTVSINFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGI 2687
            P   +  TK+PFIED G R+IKS+ F+ +SG+EI K+AE+ V+   ++   D KP P+G+
Sbjct: 4    PEEKLRCTKEPFIEDVGTRRIKSIRFSVLSGSEIRKSAEVQVWNNRIYGH-DMKPVPNGL 62

Query: 2686 LDTHLGTSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARV 2507
            LD  +G   K  +C+TC+G+FSDCPGH+GY+KLALPVF+VG+F  IL++L+CICKSC+RV
Sbjct: 63   LDPRMGVPNKREKCSTCHGEFSDCPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCSRV 122

Query: 2506 LLFEDDRKLFLRRMRNPRAEVLQKRALFKSINDKCKRVQRCPRCGDYNGTVKKLTSTLRI 2327
            LLFE DR+ FL++MRNPRA+ LQK A  K + DKCK +  CPRC   NG VKK  + L +
Sbjct: 123  LLFEKDRREFLKKMRNPRADALQKSATMKKVRDKCK-LSCCPRCDYRNGVVKKGRAGLIV 181

Query: 2326 THEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDVL 2147
             H+  SK  D  +E L        Q+K+ K   N ++  L P  VL+LF +M DEDC++L
Sbjct: 182  VHD-CSKVLDGHTEELKN----ALQNKKEKVSANSVRV-LDPATVLSLFRRMTDEDCELL 235

Query: 2146 YLHGRPEKLIVTHMAVPPVVIRPSVITDGG--SNEDDITMKLLDIIKTNVRLHTELEAGG 1973
             L  RPEKLIV+ +AVPPV IRPSV+      SNED IT+ L  I+ TN  L   L  GG
Sbjct: 236  NLGDRPEKLIVSEIAVPPVPIRPSVVVGSSRTSNEDSITVILKSIVNTNSILKETLHTGG 295

Query: 1972 QITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRGFVQRLKGKQGRFRGNLSGKR 1793
              T C + W  LQ+QV  Y+NSD P LP S        RG VQRLKGK GRFRGNLSGKR
Sbjct: 296  PFTKCFDCWQYLQLQVVEYVNSDAPCLPDSQ------HRGLVQRLKGKTGRFRGNLSGKR 349

Query: 1792 VDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYNIEKLRQRVSNGPQKYPGANY 1613
             ++TGRTVISPDPNLK+TEVA+P+LMA VLTYPE+VS YNIEKLRQ + NGP KYPGAN+
Sbjct: 350  TEYTGRTVISPDPNLKITEVAIPVLMARVLTYPERVSNYNIEKLRQCIRNGPFKYPGANF 409

Query: 1612 IISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSLHRMSIMSHRARVM 1433
            +   DG +QS+++G+ R  A +LK G IVERHLEDGD+VLFNRQPSLHRMSIMSHRAR+M
Sbjct: 410  VTQPDGMKQSLKYGDRRITARDLKCGCIVERHLEDGDVVLFNRQPSLHRMSIMSHRARIM 469

Query: 1432 PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNNLCTPKNGDILVAS 1253
            PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAL LMG+QNNLCTPKNG+ILVAS
Sbjct: 470  PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 529

Query: 1252 TQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKPIELWTGKQLFSVL 1073
            TQDFLTSSFL+TRKDTFYDR +F L+CSY+GD  E+IDLPTPA++KPIELWTGKQLFSVL
Sbjct: 530  TQDFLTSSFLVTRKDTFYDRSSFTLLCSYLGDAMENIDLPTPALIKPIELWTGKQLFSVL 589

Query: 1072 VRPNAKMRVFVNFIVMEKNYSKTG-------------ETMCPNDGCVYFRNSELISGQLG 932
            VRPNA  RVF+N  V EK YSK               ETMCPNDG VYFRNSEL+SGQ+G
Sbjct: 590  VRPNAHTRVFLNLAVQEKIYSKKKGKKEAGEETMCGRETMCPNDGYVYFRNSELLSGQVG 649

Query: 931  KATLGNGNKSGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGARLTA 752
            KATLGNGNK GL+SVLLRDYN++AAASCMNRLAK SAR+IGNHGFSIG+DDVQPG  L  
Sbjct: 650  KATLGNGNKDGLYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNR 709

Query: 751  KKEERVTEGYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGSVCLREL 572
            +K++ +  GY KC   I L+ KG L L PGCNAAQTLE  ITG LN+IR +AG+VC+  L
Sbjct: 710  QKKKEIDGGYKKCHDLISLFAKGALALHPGCNAAQTLEHNITGVLNEIRSIAGNVCMDTL 769

Query: 571  HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKKPAAK 392
            HWRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAP+GF++R+LPHFP N K PAAK
Sbjct: 770  HWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFLNRTLPHFPINSKTPAAK 829

Query: 391  GFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDGTVR 212
            GFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS  YD TVR
Sbjct: 830  GFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVR 889

Query: 211  SANSAIVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSSALSVSELSKRVD 32
            +A+  IVQFLYGDD MDP  MEGKDG PLNLD+L MK  ATCP  GS  LS   + + ++
Sbjct: 890  NASGGIVQFLYGDDGMDPAKMEGKDGMPLNLDQLFMKVMATCPQRGSDTLSPEAIKQMLE 949

Query: 31   ERLSKHD 11
            ++L +HD
Sbjct: 950  DKLLQHD 956


>tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
          Length = 1030

 Score = 1274 bits (3297), Expect = 0.0
 Identities = 639/970 (65%), Positives = 752/970 (77%), Gaps = 18/970 (1%)
 Frame = -1

Query: 2866 PTVSINFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGI 2687
            P   +  TK+PFIED G R+IKS+ F+ +SG+EI K+AE+ V+   ++   D  P P+G+
Sbjct: 4    PEEKLRCTKEPFIEDVGTRRIKSIRFSVLSGSEIRKSAEVQVWNNRIYD-RDMTPVPNGL 62

Query: 2686 LDTHLGTSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARV 2507
            LD  +G   K G+C TC+G+FSDCPGH+GY+KLALPVF+VG+F  IL++L+CICKSC+RV
Sbjct: 63   LDPRMGIPTKRGKCNTCHGEFSDCPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCSRV 122

Query: 2506 LLFEDDRKLFLRRMRNPRAEVLQKRALFKSINDKCKRVQRCPRCGDYNGTVKKLTSTLRI 2327
            LL E DR+ FL++MRNPRA+ LQK A  K + DKCK +  CPRC   NG VKK  + L +
Sbjct: 123  LLIEKDRREFLKKMRNPRADALQKSATMKKVRDKCK-LSCCPRCDYRNGVVKKGRAGLIV 181

Query: 2326 THEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDVL 2147
             H+  SK  D  +E   E   A++  KE  +  + +   L P  VL+LF +M+DEDC++L
Sbjct: 182  VHD-CSKVLDGHTE---ELKNALQNKKEKVSASSVLV--LDPATVLSLFRRMIDEDCELL 235

Query: 2146 YLHGRPEKLIVTHMAVPPVVIRPSVITDGG--SNEDDITMKLLDIIKTNVRLHTELEAGG 1973
             L  RPEKLIVT +AVPPV IRPSV+      SNED IT+ L  I+ TN  L   L  GG
Sbjct: 236  NLGDRPEKLIVTEIAVPPVPIRPSVVVGNSRTSNEDSITVILKSIVNTNSILKETLHTGG 295

Query: 1972 QITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRGFVQRLKGKQGRFRGNLSGKR 1793
              T C + W  LQ+QV  Y+NSD P LP S        RG VQRLKGK GRFRGNLSGKR
Sbjct: 296  PFTKCFDCWQYLQLQVVEYVNSDAPSLPESQ------HRGLVQRLKGKTGRFRGNLSGKR 349

Query: 1792 VDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYNIEKLRQRVSNGPQKYPGANY 1613
             ++TGRTVISPDPNLK+TEVA+P+LMA VLTYPE+VS YNIEKLRQ + NGP KYPGAN+
Sbjct: 350  TEYTGRTVISPDPNLKITEVAIPVLMARVLTYPERVSNYNIEKLRQCIRNGPFKYPGANF 409

Query: 1612 IISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSLHRMSIMSHRARVM 1433
            +   DG +QS+++G+ R  A +LK G IVERHLEDGD+VLFNRQPSLHRMSIM HRAR+M
Sbjct: 410  VTQPDGMKQSLKYGDRRITARDLKCGCIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIM 469

Query: 1432 PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNNLCTPKNGDILVAS 1253
            PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAL LMG+QNNLCTPKNG+ILVAS
Sbjct: 470  PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 529

Query: 1252 TQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKPIELWTGKQLFSVL 1073
            TQDFLTSSFL+TRKDTFYDR +F L+CSY+GDG E+IDLPTPA++KP+ELWTGKQLFSVL
Sbjct: 530  TQDFLTSSFLVTRKDTFYDRSSFTLLCSYLGDGMENIDLPTPALIKPVELWTGKQLFSVL 589

Query: 1072 VRPNAKMRVFVNFIVMEKNYSKTG----------------ETMCPNDGCVYFRNSELISG 941
            VRPNA  +VF+N  V EK YSK                  ETMCPNDG VYFRNSEL+SG
Sbjct: 590  VRPNAHTKVFLNLAVQEKIYSKKKGKKEGGEEVKETMCGRETMCPNDGYVYFRNSELLSG 649

Query: 940  QLGKATLGNGNKSGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGAR 761
            Q+GKATLGNGNK GL+SVLLRDYN++AAASCMNRLAK SAR+IGNHGFSIG+DDVQPG  
Sbjct: 650  QVGKATLGNGNKDGLYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEH 709

Query: 760  LTAKKEERVTEGYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGSVCL 581
            L  +K++ +  GY KC   I L+ KG L L PGCNAAQTLE  ITG LN+IR +AG+VC+
Sbjct: 710  LNRQKKKEIDGGYKKCHDLISLFAKGALALHPGCNAAQTLEHNITGVLNEIRSIAGNVCM 769

Query: 580  RELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKKP 401
              LHWRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAP+GF++R+LPHFP N K P
Sbjct: 770  DTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFLNRTLPHFPINSKTP 829

Query: 400  AAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDG 221
            AAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS  YD 
Sbjct: 830  AAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQ 889

Query: 220  TVRSANSAIVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSSALSVSELSK 41
            TVR+A+  IVQFLYGDD MDP  MEGKDG PLNLD+L MK  ATCP  GS  LS   + +
Sbjct: 890  TVRNASGGIVQFLYGDDGMDPAKMEGKDGMPLNLDQLFMKVMATCPQRGSDTLSPVGIKQ 949

Query: 40   RVDERLSKHD 11
             ++++  +HD
Sbjct: 950  MLEDKFLQHD 959


>gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]
          Length = 1395

 Score = 1274 bits (3296), Expect = 0.0
 Identities = 639/963 (66%), Positives = 752/963 (78%), Gaps = 17/963 (1%)
 Frame = -1

Query: 2848 FTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGILDTHLG 2669
            FTK+P+IED GPRKIKS+ F+ +S +EI KAAE+ VY+ +L+  P  +P   G+LD  +G
Sbjct: 5    FTKRPYIEDVGPRKIKSIQFSMLSDSEIAKAAEVQVYQ-ALYYDPKSRPIEGGLLDPRMG 63

Query: 2668 TSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARVLLFEDD 2489
             + K G+CATC+G F+DCPGHYGY+ LALPV++VGY   IL+IL+CICKSC+R++L E  
Sbjct: 64   PANKSGKCATCHGNFADCPGHYGYLSLALPVYNVGYLSTILDILKCICKSCSRIILDEKL 123

Query: 2488 RKLFLRRMRNPRAEVLQKRALFKSINDKCK-----RVQRCPRCGDYNGTVKKLTSTLRIT 2324
             K +L+RMR+P+ + L+K  + KSI  KC      +  +C RCG  NGTVKK  + L I 
Sbjct: 124  CKDYLKRMRSPKIDALKKGDIMKSIVKKCSAMASSKAVKCWRCGYVNGTVKKAVAMLGII 183

Query: 2323 HEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDVLY 2144
            H++      I    L EF  A+   KE KA  N     L P+KVL+LF +M D DC++LY
Sbjct: 184  HDR----SKINDNSLEEFRSAISHTKESKASFNVATYVLNPVKVLSLFKRMTDLDCELLY 239

Query: 2143 LHGRPEKLIVTHMAVPPVVIRPSVITDGG-SNEDDITMKLLDIIKTNVRLHTELEAGGQI 1967
            L  RPEKLI+T++AVPP+ IRPSVI DG  SNE+DIT +L  II+ N  L  EL      
Sbjct: 240  LSDRPEKLIITNIAVPPIPIRPSVIMDGSQSNENDITERLKRIIQANASLRQELVETNAA 299

Query: 1966 THCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRGFVQRLKGKQGRFRGNLSGKRVD 1787
              C+  W++LQV+V  YINSD+ G+P SM    KP+ GFVQR+KGK GRFRGNLSGKRV+
Sbjct: 300  FKCLGGWEMLQVEVAQYINSDVRGVPFSM-QVSKPLSGFVQRIKGKHGRFRGNLSGKRVE 358

Query: 1786 FTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYNIEKLRQRVSNGPQKYPGANYII 1607
            +TGRTVISPDPNLK+TEVA+P+ MA +LTYPE+VS +NIEKLRQ V NGP KYPGA  + 
Sbjct: 359  YTGRTVISPDPNLKITEVAIPIHMARILTYPERVSNHNIEKLRQCVRNGPSKYPGARMVR 418

Query: 1606 SMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSLHRMSIMSHRARVMPW 1427
              DGS + +     +RLA ELK+G +V+RHLEDGDIVLFNRQPSLHRMSIM HRAR+MPW
Sbjct: 419  YPDGSARLLIGDYRKRLADELKFGCVVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPW 478

Query: 1426 RTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNNLCTPKNGDILVASTQ 1247
            RTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL LMG+QNNLCTPKNG+ILVASTQ
Sbjct: 479  RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQ 538

Query: 1246 DFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKPIELWTGKQLFSVLVR 1067
            DFLTSSFLITRKD FYDR AF L+CSYMGDG + IDLPTPA+LKPIELWTGKQLFSVL+R
Sbjct: 539  DFLTSSFLITRKDIFYDRAAFSLICSYMGDGMDLIDLPTPALLKPIELWTGKQLFSVLLR 598

Query: 1066 PNAKMRVFVNFIVMEKNYSKT-----------GETMCPNDGCVYFRNSELISGQLGKATL 920
            P+A +RV++N IV E+NYSK             ETMCP+DG VY RNSELI GQLGKATL
Sbjct: 599  PHASVRVYLNLIVKERNYSKKIIKRIGNKEIEVETMCPDDGFVYIRNSELICGQLGKATL 658

Query: 919  GNGNKSGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGARLTAKKEE 740
            GNGNK GL+SVLLRDYNA+AAA+CMNRLAKLSARWIGNHGFSIGIDDVQPG RL  +K  
Sbjct: 659  GNGNKDGLYSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKRLNDEKAL 718

Query: 739  RVTEGYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGSVCLRELHWRN 560
             ++  Y KCD+ I  +N+GKL  +PG +AAQTLEA +T  LN IR+  G VC++ELHWRN
Sbjct: 719  TISGDYKKCDEEIQTFNEGKLKPKPGYDAAQTLEANVTAILNNIRDKTGKVCMKELHWRN 778

Query: 559  SPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKKPAAKGFVA 380
            SPLIMSQCGSKGS INISQMIACVGQQSVGGRRAPNGFIDRSLPHF R  K PAAKGFVA
Sbjct: 779  SPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRSLPHFHRGSKTPAAKGFVA 838

Query: 379  NSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDGTVRSANS 200
            NSFY+GLTATEFFFHTM GREGLVDTAVKTAETGYMSRRL+KALEDLS HYD TVR+A+ 
Sbjct: 839  NSFYSGLTATEFFFHTMAGREGLVDTAVKTAETGYMSRRLIKALEDLSIHYDNTVRNASG 898

Query: 199  AIVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSSALSVSELSKRVDERLS 20
             IVQF+YGDD MDP  MEGK G PLN DRLLMK KATCP      L V  + + ++E+L+
Sbjct: 899  CIVQFIYGDDGMDPACMEGKSGFPLNFDRLLMKVKATCPPIEQKCLHVGSIMQMLEEQLA 958

Query: 19   KHD 11
            KHD
Sbjct: 959  KHD 961


>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
            gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
            Japonica Group] gi|38347455|emb|CAD41360.2|
            OSJNBa0076N16.24 [Oryza sativa Japonica Group]
            gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
            Japonica Group] gi|116310339|emb|CAH67354.1|
            OSIGBa0130B08.14 [Oryza sativa Indica Group]
            gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
            Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|218195112|gb|EEC77539.1| hypothetical protein
            OsI_16437 [Oryza sativa Indica Group]
          Length = 1383

 Score = 1272 bits (3291), Expect = 0.0
 Identities = 638/960 (66%), Positives = 754/960 (78%), Gaps = 8/960 (0%)
 Frame = -1

Query: 2866 PTVSINFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGI 2687
            P   +  TK+PFIED G R+IKS+ F+  SG E+ ++AE+ V+ + ++   + KP P+G+
Sbjct: 4    PEEKLRCTKEPFIEDVGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYNH-EMKPVPNGL 62

Query: 2686 LDTHLGTSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARV 2507
            LDT +G + K+G+C+TC+G F++CPGH+GY+KLALPVF+VG+F  IL++L+CICKSC+RV
Sbjct: 63   LDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCSRV 122

Query: 2506 LLFEDDRKLFLRRMRNPRAEVLQKRALFKSINDKCKRVQRCPRCGDYNGTVKKLTSTLRI 2327
            LL E DR  FL++MRNP+A+ LQK A+ K + DKCK + RCP CG  NG  KK  + L I
Sbjct: 123  LLMEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKCK-LSRCPWCGFINGVAKKGRAGLII 181

Query: 2326 THEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDVL 2147
             H+  SK  D  +E   E  +A+   KE K  ++ ++  L P  VL+LF +M DEDC++L
Sbjct: 182  LHD-CSKTLDGSTE---ELRDALSHKKE-KLSISAVRM-LDPAIVLSLFKRMTDEDCELL 235

Query: 2146 YLHGRPEKLIVTHMAVPPVVIRPSVITDGG--SNEDDITMKLLDIIKTNVRLHTELEAGG 1973
             L  RPEKLIVT +AVPPV IRPSV   GG  SNED IT+ L  I  TN  L   L+ GG
Sbjct: 236  NLGDRPEKLIVTEIAVPPVPIRPSVFVAGGRMSNEDSITVILKSIANTNSILKENLQTGG 295

Query: 1972 QITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRGFVQRLKGKQGRFRGNLSGKR 1793
            Q   C + W  LQ+QV  YINSD P LP S        RG VQRLKGK GRFRGNLSGKR
Sbjct: 296  QFMKCFDCWQHLQLQVVEYINSDAPSLPESQ------HRGLVQRLKGKTGRFRGNLSGKR 349

Query: 1792 VDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYNIEKLRQRVSNGPQKYPGANY 1613
             ++TGRTVISPDPNL++TEVA+P+LMA VLTYPE+VS YNIEKLRQ + NGP K+PGAN+
Sbjct: 350  TEYTGRTVISPDPNLRITEVAIPILMARVLTYPERVSYYNIEKLRQCIRNGPHKHPGANF 409

Query: 1612 IISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSLHRMSIMSHRARVM 1433
            II  DG++  +++ + R  A +LKYG +VERHLEDGDIVLFNRQPSLHRMSIMSHRAR+M
Sbjct: 410  IIQPDGTKLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIM 469

Query: 1432 PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNNLCTPKNGDILVAS 1253
            PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAL LMG+QNNLCTPKNG+ILVAS
Sbjct: 470  PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 529

Query: 1252 TQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKPIELWTGKQLFSVL 1073
            TQDFLTSSFL+TRKD FYDR +F L+CSY+GD  E+IDLPTPA++KPIELWTGKQLFSVL
Sbjct: 530  TQDFLTSSFLVTRKDNFYDRSSFSLLCSYLGDAMENIDLPTPALIKPIELWTGKQLFSVL 589

Query: 1072 VRPNAKMRVFVNFIVMEKNYSKTG------ETMCPNDGCVYFRNSELISGQLGKATLGNG 911
            VRPNA  +VF+N  V EK Y          E MCPNDG VYFRNSEL+SGQ+GKATLGNG
Sbjct: 590  VRPNACTKVFLNLTVKEKIYKTPKGSTLEPEAMCPNDGFVYFRNSELLSGQVGKATLGNG 649

Query: 910  NKSGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGARLTAKKEERVT 731
            NK G+FS L+RDYN++AAASCMNRLAK SAR+IGNHGFSIG+DDVQPG  L  +K+ ++ 
Sbjct: 650  NKDGMFSTLVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNQEKKMKID 709

Query: 730  EGYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGSVCLRELHWRNSPL 551
             GY  C   I  Y+KG L LQPGCNAAQTLE  IT  LN+IRE AG VC+  LHWRNSPL
Sbjct: 710  GGYKDCHDLIASYSKGALRLQPGCNAAQTLEQSITRVLNEIREEAGKVCMNTLHWRNSPL 769

Query: 550  IMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKKPAAKGFVANSF 371
            IMSQCGSKGSPINISQM+ACVGQQSVGGRRAPNGFIDR+LPHFP N K PAAKGFVANSF
Sbjct: 770  IMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSF 829

Query: 370  YTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDGTVRSANSAIV 191
            YTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS  YD TVR+A+  IV
Sbjct: 830  YTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIV 889

Query: 190  QFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSSALSVSELSKRVDERLSKHD 11
            QFLYGDD MDP  MEGKDG+PLNLD+L MK  ATCP  G + LS  E+ + ++++LS+HD
Sbjct: 890  QFLYGDDGMDPAKMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDKLSEHD 949


>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
            brachyantha]
          Length = 1389

 Score = 1270 bits (3287), Expect = 0.0
 Identities = 635/971 (65%), Positives = 757/971 (77%), Gaps = 19/971 (1%)
 Frame = -1

Query: 2866 PTVSINFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGI 2687
            P   +  TK+PFIEDAG R+IKS+ F+  SG E+ ++AE+ V+ + ++   + +P P+G+
Sbjct: 4    PEEKLRCTKEPFIEDAGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYN-QEMRPVPNGL 62

Query: 2686 LDTHLGTSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARV 2507
            LDT +G + K+G+C+TC+G F++CPGH+GY+KLALPVF+VG+F  IL++L+CICK C+RV
Sbjct: 63   LDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKGCSRV 122

Query: 2506 LLFEDDRKLFLRRMRNPRAEVLQKRALFKSINDKCKRVQRCPRCGDYNGTVKKLTSTLRI 2327
            LL E DR  FL++MRNP+A+ LQK A+ K + DKCK + RCP CG  NG  KK  + L I
Sbjct: 123  LLVEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKCK-LSRCPWCGFINGVAKKGRAGLII 181

Query: 2326 THEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDVL 2147
             H+  SK  D  +E   E  EA+   KE  +F       L P  VL+LF +M DEDC++L
Sbjct: 182  LHD-CSKTLDGSTE---ELKEALSHKKEKLSF--SAVHMLDPATVLSLFKRMTDEDCELL 235

Query: 2146 YLHGRPEKLIVTHMAVPPVVIRPSVITDGG--SNEDDITMKLLDIIKTNVRLHTELEAGG 1973
             L  RPEKLIVT +AVPPV IRPSV   GG  SNED IT+ L  I  TN  L   L+ GG
Sbjct: 236  NLGDRPEKLIVTEIAVPPVPIRPSVFVAGGRMSNEDSITVILKSIANTNSILKENLQTGG 295

Query: 1972 QITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRGFVQRLKGKQGRFRGNLSGKR 1793
            Q   C + W  LQ+QV  YINSD P LP S        RG VQRLKGK GRFRGNLSGKR
Sbjct: 296  QFMKCFDCWQHLQLQVVEYINSDAPSLPESQ------HRGLVQRLKGKTGRFRGNLSGKR 349

Query: 1792 VDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYNIEKLRQRVSNGPQKYPGANY 1613
             ++TGRTVISPDPNL++TEVA+P+LMA VLTYPE+VS YNIEKLRQ + NGP K+PGAN+
Sbjct: 350  TEYTGRTVISPDPNLRITEVAIPILMARVLTYPERVSYYNIEKLRQCIRNGPHKHPGANF 409

Query: 1612 IISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSLHRMSIMSHRARVM 1433
            II  DG++  +++ + R  A +LKYG +VERHLEDGDIVLFNRQPSLHRMSIMSHRAR+M
Sbjct: 410  IIQTDGTKLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIM 469

Query: 1432 PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNNLCTPKNGDILVAS 1253
            PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAL LMG+QNNLCTPKNG+ILVAS
Sbjct: 470  PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 529

Query: 1252 TQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKPIELWTGKQLFSVL 1073
            TQDFLTSSFL+TRKD FYDR +F L+CSY+GD  E+IDLPTPA++KPIELWTGKQLFSVL
Sbjct: 530  TQDFLTSSFLVTRKDNFYDRSSFTLLCSYLGDAMENIDLPTPALVKPIELWTGKQLFSVL 589

Query: 1072 VRPNAKMRVFVNFIVMEKNYSKTGETMCPNDGCVYFRNSELISGQLGKATLGNGNKSGLF 893
            VRPNA  +VF+N  V EK YSK+ ETMCPNDG VYFRNSEL+SGQ+GK TLGNGNK G+F
Sbjct: 590  VRPNACTKVFLNLTVKEKIYSKSRETMCPNDGFVYFRNSELLSGQVGKKTLGNGNKDGMF 649

Query: 892  SVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGARLTAKKEERVTEGYNKC 713
            S+L+RDYN++AAASCMNRLAK SAR+IGNHGFSIG+DDV+PG  L  +K++++ EGY +C
Sbjct: 650  SILVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVRPGEHLDQQKKKKIDEGYKEC 709

Query: 712  DKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGSVCLRELHWRNSPLIMSQCG 533
               I  ++KG L LQPGCNAAQTLE +IT  LNKIRE AG++C+  LHWRNSPLIMSQCG
Sbjct: 710  HDLITSFSKGALTLQPGCNAAQTLEHKITHVLNKIREAAGNICMDTLHWRNSPLIMSQCG 769

Query: 532  SKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKKPAAKGFVANSFYTGLT- 356
            SKGSPINISQM+ CVGQQSVGG RAPNGFIDR+LPHFP N K PAAKGFVANSFY GLT 
Sbjct: 770  SKGSPINISQMVVCVGQQSVGGHRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYNGLTA 829

Query: 355  ----------------ATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYD 224
                            ATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS  YD
Sbjct: 830  TEFFFHTMGGIYIVLPATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYD 889

Query: 223  GTVRSANSAIVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSSALSVSELS 44
             TVR+A+  IVQFLYGDD MDP  MEG+DG+PLNLD+L MK  ATCP  G + LS  E+ 
Sbjct: 890  QTVRNASGGIVQFLYGDDGMDPAKMEGEDGKPLNLDQLFMKVMATCPQRGQNTLSPGEIL 949

Query: 43   KRVDERLSKHD 11
            + ++++LS+HD
Sbjct: 950  QILNDKLSEHD 960


>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            rpc1-like isoform X2 [Citrus sinensis]
          Length = 1404

 Score = 1266 bits (3276), Expect = 0.0
 Identities = 644/964 (66%), Positives = 751/964 (77%), Gaps = 16/964 (1%)
 Frame = -1

Query: 2857 SINFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGILDT 2678
            SI FTKQP+IED GPRKI+S+ F+ MS +EI+KAAE+ VY+   +   +R P   G+LD 
Sbjct: 11   SIAFTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYS-SNRVPIEGGLLDP 69

Query: 2677 HLGTSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARVLLF 2498
             +G + K   CATC+G FS+CPGHYGY+ LALPV++VGY   IL+IL+CICK C+R+LL 
Sbjct: 70   RMGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYNVGYLSTILDILKCICKYCSRLLLE 129

Query: 2497 EDDRKLFLRRMRNPRAEVLQKRALFKSINDKCK----RVQRCPRCGDYNGTVKKLTSTLR 2330
            E   K +L++MRNP+ E L+K  L KSI  KC     +  +CPRCG  NG VKK  + L 
Sbjct: 130  EKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMASKAVKCPRCGYINGMVKKAVAVLG 189

Query: 2329 ITHEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDV 2150
            I H++ SK     +E L EFA A+   KE KA +N     L P+ VL LF +M D DC+V
Sbjct: 190  IIHDR-SKV----TESLQEFASAITHTKESKAAVNVATYILNPVNVLFLFKRMTDTDCEV 244

Query: 2149 LYLHGRPEKLIVTHMAVPPVVIRPSVITDGG-SNEDDITMKLLDIIKTNVRLHTELEAGG 1973
            LYL  RPEKLI+T++AVPP+ IRPSVI DG  SNE+DIT +L  II+TN  L  EL    
Sbjct: 245  LYLSERPEKLIITNIAVPPIAIRPSVIMDGSQSNENDITERLKRIIQTNASLQQELVEAN 304

Query: 1972 QITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRGFVQRLKGKQGRFRGNLSGKR 1793
                 +  W+ LQV+V  YINSD+ G+P SM    +P+ GFVQRLKGKQGRFRGNLSGKR
Sbjct: 305  SAFKSLAGWETLQVEVAQYINSDVRGVPFSM-QVARPLSGFVQRLKGKQGRFRGNLSGKR 363

Query: 1792 VDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYNIEKLRQRVSNGPQKYPGANY 1613
            V++TGRTVISPDPNLK+TEVA+P+ MA +LTYPE+VS +NIEKLRQ + NGP KYPGA  
Sbjct: 364  VEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDHNIEKLRQCIQNGPDKYPGARM 423

Query: 1612 IISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSLHRMSIMSHRARVM 1433
            I   DG+ + +      +LA ELK G IV+RHLEDGD+VLFNRQPSLHRMSIM HRAR+M
Sbjct: 424  IRYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIM 483

Query: 1432 PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNNLCTPKNGDILVAS 1253
            PWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL LMG+QNNLCTPKNG+ILVAS
Sbjct: 484  PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVAS 543

Query: 1252 TQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKPIELWTGKQLFSVL 1073
            TQDFLTSSFLITRKDTFYDR AF LMC YMGDG + +DLPTPAILKP+ELWTGKQLFSVL
Sbjct: 544  TQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLPTPAILKPVELWTGKQLFSVL 603

Query: 1072 VRPNAKMRVFVNFIVMEKNYSKTG-----------ETMCPNDGCVYFRNSELISGQLGKA 926
            +RP+A MRV+VN  V EK YS              ETMCPNDG VYFRNSELISGQLGKA
Sbjct: 604  IRPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCPNDGFVYFRNSELISGQLGKA 663

Query: 925  TLGNGNKSGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGARLTAKK 746
            TLGNGNK GL+SVLLRDY A+A + CMNRLAKLSARWIGNHGFSIGIDDVQP   L+ KK
Sbjct: 664  TLGNGNKDGLYSVLLRDYGAHATSGCMNRLAKLSARWIGNHGFSIGIDDVQPKKELSDKK 723

Query: 745  EERVTEGYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGSVCLRELHW 566
             + ++E Y  C+  I  YN+GKL L+PGC+AAQTLEA IT  LN+IRE AG  C+  L W
Sbjct: 724  GKLISENYEVCNVKIKEYNEGKLQLKPGCDAAQTLEAVITDILNRIREDAGKACMGSLPW 783

Query: 565  RNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKKPAAKGF 386
            RNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAPNGFIDRSLPHFPR  K+PAAKGF
Sbjct: 784  RNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKAKEPAAKGF 843

Query: 385  VANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDGTVRSA 206
            VANSFY+GL+ATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+KALEDLS  YD +VR+A
Sbjct: 844  VANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNSVRNA 903

Query: 205  NSAIVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSSALSVSELSKRVDER 26
               IVQFLYGDD MDP +MEGK GEPLN DRLLMK KATCP  G   LS  ++S+ V+++
Sbjct: 904  GGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSPQQVSEIVEKQ 963

Query: 25   LSKH 14
            L+ +
Sbjct: 964  LAAY 967


>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
            italica]
          Length = 1397

 Score = 1254 bits (3245), Expect = 0.0
 Identities = 629/972 (64%), Positives = 754/972 (77%), Gaps = 21/972 (2%)
 Frame = -1

Query: 2866 PTVSINFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGI 2687
            P   +  TK+PFIED G R+IKS+ F+ +SG+EI K+AE+ V+ + ++   D KP P+G+
Sbjct: 4    PEEKLRCTKEPFIEDVGARRIKSIRFSVLSGSEIRKSAEVQVWNSRIYEH-DMKPVPNGL 62

Query: 2686 LDTHLGTSYKIG---QCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSC 2516
            LD  +G + K     +C+TC+G F++CPGH+GY+KLALPVF+VG+F  IL++L+CICK C
Sbjct: 63   LDMRMGLASKKDTELKCSTCHGPFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKGC 122

Query: 2515 ARVLLFEDDRKLFLRRMRNPRAEVLQKRALFKSINDKCKRVQRCPRCGDYNGTVKKLTST 2336
            +RVLL E DR+ FL++MRNPRA+ LQK A+ K + DKCK +  CPRC   NG VKK    
Sbjct: 123  SRVLLAEKDRREFLKKMRNPRADALQKSAIMKKVRDKCK-LTCCPRCEYKNGVVKKGRVG 181

Query: 2335 LRITHEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDC 2156
            L + H+       I   +  E   A++  KE K   + ++  L P   L+LF +MVDEDC
Sbjct: 182  LIVIHD----CSKILDGHTEELKNALQHKKE-KVSTSSVRM-LDPATALSLFRRMVDEDC 235

Query: 2155 DVLYLHGRPEKLIVTHMAVPPVVIRPSVITDGG--SNEDDITMKLLDIIKTNVRLHTELE 1982
            ++L L  RPEKLIVT +AVPPV IRPSV+      SNED IT  L  I+ TN  L   L+
Sbjct: 236  ELLNLGDRPEKLIVTEIAVPPVPIRPSVVVGNTRTSNEDSITAILKSIVNTNSILKETLQ 295

Query: 1981 AGGQITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRGFVQRLKGKQGRFRGNLS 1802
             GG  + C + W  LQ+QV  ++NSD P LP S        RG VQRLKGK GRFRGNLS
Sbjct: 296  TGGLFSKCFDCWQQLQLQVVEFVNSDAPCLPESQ------HRGLVQRLKGKTGRFRGNLS 349

Query: 1801 GKRVDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYNIEKLRQRVSNGPQKYPG 1622
            GKR ++TGRTVISPDPNL++TEVA+P+LMA VLTYPE+VS YN+EKLRQ + NGP K+PG
Sbjct: 350  GKRTEYTGRTVISPDPNLRITEVAIPVLMARVLTYPERVSNYNLEKLRQCIRNGPYKHPG 409

Query: 1621 ANYIISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSLHRMSIMSHRA 1442
            AN+II+ DG++ S+++G+ R  A +LK G  VERHLEDGD+VLFNRQPSLHRMSIMSHRA
Sbjct: 410  ANFIITPDGTKLSLKYGDRRIHARDLKCGYTVERHLEDGDVVLFNRQPSLHRMSIMSHRA 469

Query: 1441 RVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNNLCTPKNGDIL 1262
            R+MPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAL LMG+QNNLCTPKNG+IL
Sbjct: 470  RIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEIL 529

Query: 1261 VASTQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKPIELWTGKQLF 1082
            VASTQDFLTSSFL+TRKD FYDR +F L+CSY+GD  E+IDLPTPA++KPIELWTGKQLF
Sbjct: 530  VASTQDFLTSSFLVTRKDAFYDRSSFALLCSYVGDAMENIDLPTPALIKPIELWTGKQLF 589

Query: 1081 SVLVRPNAKMRVFVNFIVMEKNYSKTGE----------------TMCPNDGCVYFRNSEL 950
            SVLVRPNA+ +VF+N  V EK YSK  E                TMCPNDG VYFRNSEL
Sbjct: 590  SVLVRPNARTKVFLNLAVKEKIYSKKKEKKEGEEEEKETMCGRETMCPNDGYVYFRNSEL 649

Query: 949  ISGQLGKATLGNGNKSGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQP 770
            +SGQ+GKATLGNGNK G++SVLLRDYN++AAASCMNRLAK SAR+IGNHGFSIG+DDVQP
Sbjct: 650  LSGQVGKATLGNGNKDGIYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQP 709

Query: 769  GARLTAKKEERVTEGYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGS 590
            G  L  +K++++ EGY +C   I L+ KG L L PGCNAAQTLE +ITG LN+IR  AG+
Sbjct: 710  GEHLNRQKKKKIDEGYKQCHDLISLFAKGALALHPGCNAAQTLEHKITGVLNEIRTAAGN 769

Query: 589  VCLRELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRND 410
            VC+  LHWRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAP+GFIDR+LPHFP N 
Sbjct: 770  VCMDTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRTLPHFPINS 829

Query: 409  KKPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTH 230
            K PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS  
Sbjct: 830  KTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVF 889

Query: 229  YDGTVRSANSAIVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSSALSVSE 50
            YD TVR+A+  IVQFLYGDD MDP  MEGKDG PLNLD+L MK  ATCP  G   LS  +
Sbjct: 890  YDQTVRNASGGIVQFLYGDDGMDPAKMEGKDGTPLNLDQLFMKVTATCPHRGLDTLSPDD 949

Query: 49   LSKRVDERLSKH 14
            + + ++++L++H
Sbjct: 950  IKQMLEDKLTQH 961


>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1394

 Score = 1242 bits (3213), Expect = 0.0
 Identities = 632/962 (65%), Positives = 743/962 (77%), Gaps = 14/962 (1%)
 Frame = -1

Query: 2854 INFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGILDTH 2675
            I +TKQP+IED GPR+IKS+ F+TMSG++I+KA+E  V+    +   ++K    G+LDT 
Sbjct: 8    IIYTKQPYIEDVGPRRIKSIQFSTMSGSDILKASECQVH-LGQYYDANKKAIVGGLLDTR 66

Query: 2674 LGTSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARVLLFE 2495
            +G   K G C TC G F+DCPGH+GY+ L LPV++VGY   IL+IL+CICKSC+RVL+ E
Sbjct: 67   MGAPNKHGTCQTCGGSFTDCPGHFGYLNLVLPVYNVGYLSTILDILKCICKSCSRVLVDE 126

Query: 2494 DDRKLFLRRMRNPRAEVLQKRALFKSINDKCK-----RVQRCPRCGDYNGTVKKLTSTLR 2330
              RK +L+RMRNPR E L+K  L K I  KC      +  +C RCG  NG VKK  S + 
Sbjct: 127  KLRKSYLKRMRNPRTEPLKKNELMKEIVKKCSSMASSKAVKCLRCGYMNGMVKKAGSVVG 186

Query: 2329 ITHEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDV 2150
            I H++ SK  D    YL E   A+   +E +A +      L P++VL+LF +MV+EDC++
Sbjct: 187  IIHDR-SKLID---GYLEECKSAIGHTREARAPIGLATYILNPVRVLSLFQRMVEEDCEL 242

Query: 2149 LYLHGRPEKLIVTHMAVPPVVIRPSVITDGG-SNEDDITMKLLDIIKTNVRLHTELEAGG 1973
            LYL GRPEKLI+T +AVPP+ IRPSV T+G  SNE+DIT +L  II+ N +L  EL  G 
Sbjct: 243  LYLQGRPEKLIITTIAVPPISIRPSVFTEGSQSNENDITERLKQIIQFNAKLRLELLEGR 302

Query: 1972 QI-THCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRGFVQRLKGKQGRFRGNLSGK 1796
            +     +  WD LQ  V LYINSD+  +P  M   G+P+ GFVQRL GKQGRFR NL+GK
Sbjct: 303  RTGIKYLIGWDELQAVVTLYINSDVR-IPLDM-QVGRPLSGFVQRLTGKQGRFRQNLAGK 360

Query: 1795 RVDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYNIEKLRQRVSNGPQKYPGAN 1616
            RV+FTGRTVISPDPNLK+TEVA+P+ MA +LTYPE+V+ +NIEKLRQ V+NG  KYPGA 
Sbjct: 361  RVEFTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCVNNGSYKYPGAR 420

Query: 1615 YIISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSLHRMSIMSHRARV 1436
             +   DGS + +     +R+A ELK G IV RHLEDGD+VLFNRQPSLHRMSIM HRAR+
Sbjct: 421  MVTYPDGSSKMLTGNYRKRIAEELKSGCIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARI 480

Query: 1435 MPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNNLCTPKNGDILVA 1256
            MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA  LMG+QNNLCTPKNG+ILVA
Sbjct: 481  MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAFLLMGVQNNLCTPKNGEILVA 540

Query: 1255 STQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKPIELWTGKQLFSV 1076
            STQDFLTSSFLITRKDTFYDR AF LMCSYM DG + +DLPTP++LKPIELWTGKQLFSV
Sbjct: 541  STQDFLTSSFLITRKDTFYDRAAFSLMCSYMNDGMDLVDLPTPSVLKPIELWTGKQLFSV 600

Query: 1075 LVRPNAKMRVFVNFIVMEKNYS-------KTGETMCPNDGCVYFRNSELISGQLGKATLG 917
            L+RP+A +RV+VN I+ EKNYS       K  ETMCPNDG VYFRNSELISGQLGKATLG
Sbjct: 601  LLRPHANVRVYVNLILKEKNYSRPNKEHKKERETMCPNDGYVYFRNSELISGQLGKATLG 660

Query: 916  NGNKSGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGARLTAKKEER 737
            NGNK GL+S+LLRDYNAYAAA+CMNRLAKLSARWIGNHGFSIGIDDVQPG +L  +K + 
Sbjct: 661  NGNKDGLYSILLRDYNAYAAATCMNRLAKLSARWIGNHGFSIGIDDVQPGKKLIDEKGKT 720

Query: 736  VTEGYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGSVCLRELHWRNS 557
            ++ GY  C+K I  YN G+L L+ GC+A QTLE EIT  LNK+RE AG VC++ELHWRNS
Sbjct: 721  ISNGYRHCNKLIADYNGGRLALKSGCDATQTLETEITERLNKLREEAGDVCMKELHWRNS 780

Query: 556  PLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKKPAAKGFVAN 377
            PLIMSQCGSKGSPINISQMIACVGQQSVGG RAP+GFIDRSLPHFPR  K PAAKGFVAN
Sbjct: 781  PLIMSQCGSKGSPINISQMIACVGQQSVGGSRAPDGFIDRSLPHFPRKSKTPAAKGFVAN 840

Query: 376  SFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDGTVRSANSA 197
            SFY+GL+ATEFFFHTMGGREGLVDTAVKTA+TGYM+RRL K LEDL   YD TV+ A   
Sbjct: 841  SFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMARRLSKGLEDLCVQYDNTVQDAGGG 900

Query: 196  IVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSSALSVSELSKRVDERLSK 17
            IVQFLYGDD +DP  MEGK G PLN DRL MK KATC A     LS S++S  V   L K
Sbjct: 901  IVQFLYGDDGLDPAIMEGKAGVPLNFDRLFMKVKATCGAEEDEYLSPSDISNIVQSLLLK 960

Query: 16   HD 11
            H+
Sbjct: 961  HN 962


>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X2 [Solanum tuberosum]
          Length = 1243

 Score = 1241 bits (3211), Expect = 0.0
 Identities = 618/960 (64%), Positives = 749/960 (78%), Gaps = 8/960 (0%)
 Frame = -1

Query: 2857 SINFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGILDT 2678
            S+  TKQP+IED GPRKIKS+ F+  S +EI+K+AE+ VY   L+    +KP  +G+LD 
Sbjct: 7    SLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVY-LGLYYESTKKPIQNGLLDP 65

Query: 2677 HLGTSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARVLLF 2498
             +G   K G C TC+G F +CPGHYGY+ LALPV++VGY   +++IL+CICK C+ +LL 
Sbjct: 66   RMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCSSILLD 125

Query: 2497 EDDRKLFLRRMRNPRAEVLQKRALFKSINDKC------KRVQRCPRCGDYNGTVKKLTST 2336
            + +R+  L++MRNPR E L+K  L K +  +C      ++   C +CG  NG VKKL   
Sbjct: 126  DKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAMAGGQKTATCSKCGYMNGMVKKLQ-- 183

Query: 2335 LRITHEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDC 2156
            L+ITHE+ ++        L E   A+   +EL+A ++ +  +L P  V +LF  M DEDC
Sbjct: 184  LKITHEQGNRI-------LDEINVAISDKRELRASVS-VPPELDPKVVYSLFKNMSDEDC 235

Query: 2155 DVLYLHGRPEKLIVTHMAVPPVVIRPSVITDGG--SNEDDITMKLLDIIKTNVRLHTELE 1982
            ++LYL  RPEKL+VT + VPP+ IRPSV  DGG  SNE+DIT +L  II+ N  LH E+ 
Sbjct: 236  ELLYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMS 295

Query: 1981 AGGQITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRGFVQRLKGKQGRFRGNLS 1802
                +   +  W  LQ++V  YINSD+ G+P  M  + +P+ GF QRLKGKQGRFRGNLS
Sbjct: 296  DSSPVKS-LNLWIDLQMEVAQYINSDVRGVPLHMQAQ-RPLSGFTQRLKGKQGRFRGNLS 353

Query: 1801 GKRVDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYNIEKLRQRVSNGPQKYPG 1622
            GKRV++TGRTVISPDPNLK+TEVA+P+LMA +LTYPE+VS++NIEKLRQ V NGP KYPG
Sbjct: 354  GKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPG 413

Query: 1621 ANYIISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSLHRMSIMSHRA 1442
            A +I   DGS  S+   + +R A ELK+G IV+RHLEDGDIVLFNRQPSLHRMSIMSHRA
Sbjct: 414  AKFIRHPDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRA 473

Query: 1441 RVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNNLCTPKNGDIL 1262
            R+MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL LMG+QNNLCTPK+G+IL
Sbjct: 474  RIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEIL 533

Query: 1261 VASTQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKPIELWTGKQLF 1082
            VASTQDFLTSSFLITRKDTFY+R +F L+CSYMGD  +  DLP+PA +KP+ELWTGKQLF
Sbjct: 534  VASTQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLF 593

Query: 1081 SVLVRPNAKMRVFVNFIVMEKNYSKTGETMCPNDGCVYFRNSELISGQLGKATLGNGNKS 902
             +L+RP +KMRV+VN  V EK+YS  GETMCP+DG VYFRNSELISGQLGKATLGNGNK 
Sbjct: 594  HMLLRPYSKMRVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLGNGNKD 653

Query: 901  GLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGARLTAKKEERVTEGY 722
            GL+SVLLRDY ++AAA+CMNRLAKLSARWIGNHGFSIGIDDV PG  L  +K+  +   Y
Sbjct: 654  GLYSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNY 713

Query: 721  NKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGSVCLRELHWRNSPLIMS 542
             KC+  I  +N+GKL +QPGC+AAQTLEAE+T  LNK+R+  G +C++ L WRNSPLIMS
Sbjct: 714  KKCEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMS 773

Query: 541  QCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKKPAAKGFVANSFYTG 362
            QCGSKGSPINISQMIACVGQQSVGGRRAP+GFIDRSLPHFP   K PAAKGFVA+SF+ G
Sbjct: 774  QCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDG 833

Query: 361  LTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDGTVRSANSAIVQFL 182
            L+ATEFFFHTMGGREGLVDTAVKTA+TGYMSRRLMKALEDL+ +YD TVR+A++ IVQF+
Sbjct: 834  LSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFM 893

Query: 181  YGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSSALSVSELSKRVDERLSKHDMQP 2
            YGDD MDP  ME K G PLN  RL MK KATCP  G  +LS SE+ + V+ERLS HDM P
Sbjct: 894  YGDDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTP 953


>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Solanum tuberosum]
          Length = 1394

 Score = 1241 bits (3211), Expect = 0.0
 Identities = 618/960 (64%), Positives = 749/960 (78%), Gaps = 8/960 (0%)
 Frame = -1

Query: 2857 SINFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGILDT 2678
            S+  TKQP+IED GPRKIKS+ F+  S +EI+K+AE+ VY   L+    +KP  +G+LD 
Sbjct: 7    SLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVY-LGLYYESTKKPIQNGLLDP 65

Query: 2677 HLGTSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARVLLF 2498
             +G   K G C TC+G F +CPGHYGY+ LALPV++VGY   +++IL+CICK C+ +LL 
Sbjct: 66   RMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCSSILLD 125

Query: 2497 EDDRKLFLRRMRNPRAEVLQKRALFKSINDKC------KRVQRCPRCGDYNGTVKKLTST 2336
            + +R+  L++MRNPR E L+K  L K +  +C      ++   C +CG  NG VKKL   
Sbjct: 126  DKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAMAGGQKTATCSKCGYMNGMVKKLQ-- 183

Query: 2335 LRITHEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDC 2156
            L+ITHE+ ++        L E   A+   +EL+A ++ +  +L P  V +LF  M DEDC
Sbjct: 184  LKITHEQGNRI-------LDEINVAISDKRELRASVS-VPPELDPKVVYSLFKNMSDEDC 235

Query: 2155 DVLYLHGRPEKLIVTHMAVPPVVIRPSVITDGG--SNEDDITMKLLDIIKTNVRLHTELE 1982
            ++LYL  RPEKL+VT + VPP+ IRPSV  DGG  SNE+DIT +L  II+ N  LH E+ 
Sbjct: 236  ELLYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMS 295

Query: 1981 AGGQITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRGFVQRLKGKQGRFRGNLS 1802
                +   +  W  LQ++V  YINSD+ G+P  M  + +P+ GF QRLKGKQGRFRGNLS
Sbjct: 296  DSSPVKS-LNLWIDLQMEVAQYINSDVRGVPLHMQAQ-RPLSGFTQRLKGKQGRFRGNLS 353

Query: 1801 GKRVDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYNIEKLRQRVSNGPQKYPG 1622
            GKRV++TGRTVISPDPNLK+TEVA+P+LMA +LTYPE+VS++NIEKLRQ V NGP KYPG
Sbjct: 354  GKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPG 413

Query: 1621 ANYIISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSLHRMSIMSHRA 1442
            A +I   DGS  S+   + +R A ELK+G IV+RHLEDGDIVLFNRQPSLHRMSIMSHRA
Sbjct: 414  AKFIRHPDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRA 473

Query: 1441 RVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNNLCTPKNGDIL 1262
            R+MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL LMG+QNNLCTPK+G+IL
Sbjct: 474  RIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEIL 533

Query: 1261 VASTQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKPIELWTGKQLF 1082
            VASTQDFLTSSFLITRKDTFY+R +F L+CSYMGD  +  DLP+PA +KP+ELWTGKQLF
Sbjct: 534  VASTQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLF 593

Query: 1081 SVLVRPNAKMRVFVNFIVMEKNYSKTGETMCPNDGCVYFRNSELISGQLGKATLGNGNKS 902
             +L+RP +KMRV+VN  V EK+YS  GETMCP+DG VYFRNSELISGQLGKATLGNGNK 
Sbjct: 594  HMLLRPYSKMRVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLGNGNKD 653

Query: 901  GLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGARLTAKKEERVTEGY 722
            GL+SVLLRDY ++AAA+CMNRLAKLSARWIGNHGFSIGIDDV PG  L  +K+  +   Y
Sbjct: 654  GLYSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNY 713

Query: 721  NKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGSVCLRELHWRNSPLIMS 542
             KC+  I  +N+GKL +QPGC+AAQTLEAE+T  LNK+R+  G +C++ L WRNSPLIMS
Sbjct: 714  KKCEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMS 773

Query: 541  QCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKKPAAKGFVANSFYTG 362
            QCGSKGSPINISQMIACVGQQSVGGRRAP+GFIDRSLPHFP   K PAAKGFVA+SF+ G
Sbjct: 774  QCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDG 833

Query: 361  LTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDGTVRSANSAIVQFL 182
            L+ATEFFFHTMGGREGLVDTAVKTA+TGYMSRRLMKALEDL+ +YD TVR+A++ IVQF+
Sbjct: 834  LSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFM 893

Query: 181  YGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSSALSVSELSKRVDERLSKHDMQP 2
            YGDD MDP  ME K G PLN  RL MK KATCP  G  +LS SE+ + V+ERLS HDM P
Sbjct: 894  YGDDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTP 953


>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
            lycopersicum]
          Length = 1390

 Score = 1240 bits (3209), Expect = 0.0
 Identities = 616/960 (64%), Positives = 747/960 (77%), Gaps = 8/960 (0%)
 Frame = -1

Query: 2857 SINFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGILDT 2678
            S+  TKQP+IED GPRKIKS+ F+  S +EI+K AE+ VY   L+    +KP  +G+LD 
Sbjct: 7    SLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKLAEVEVY-LGLYYESTKKPIQNGLLDP 65

Query: 2677 HLGTSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARVLLF 2498
             +G   K G C TC+G F +CPGHYGY+ LALPV++VGY   +++IL+CICK C+ +LL 
Sbjct: 66   RMGPPNKSGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCSSILLD 125

Query: 2497 EDDRKLFLRRMRNPRAEVLQKRALFKSINDKC------KRVQRCPRCGDYNGTVKKLTST 2336
            + +R+  L++MRNPR E L+K  L K +  +C      ++   C +CG  NG VKKL   
Sbjct: 126  DKERRDILKKMRNPRTEFLKKSELHKRVVKRCNAMAGGQKTATCSKCGYMNGMVKKLQ-- 183

Query: 2335 LRITHEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDC 2156
            L+ITHE+ ++        L E   A+   +EL+A ++ +  ++ P  V +LF  M DEDC
Sbjct: 184  LKITHEQGNRI-------LDEINVAISDKRELRASVS-VPPEIDPKVVYSLFKNMSDEDC 235

Query: 2155 DVLYLHGRPEKLIVTHMAVPPVVIRPSVITDGG--SNEDDITMKLLDIIKTNVRLHTELE 1982
            ++LYL  RPEKL+VT + VPP+ IRPSV  DGG  SNE+DIT +L  II+ N  LH E+ 
Sbjct: 236  ELLYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMS 295

Query: 1981 AGGQITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRGFVQRLKGKQGRFRGNLS 1802
                +   +  W  LQ++V  YINSD+ G+P  M P  +P+ GF QRLKGKQGRFRGNLS
Sbjct: 296  DSSPVKS-LNQWIDLQMEVAQYINSDVRGVPLQMQPP-RPLSGFTQRLKGKQGRFRGNLS 353

Query: 1801 GKRVDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYNIEKLRQRVSNGPQKYPG 1622
            GKRV++TGRTVISPDPNLK+TEVA+P+LMA +LTYPE+VS++NIEKLRQ V NGP KYPG
Sbjct: 354  GKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPG 413

Query: 1621 ANYIISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSLHRMSIMSHRA 1442
            A +I   DG+  S+   + +R A ELK+G IV+RHLEDGDIVLFNRQPSLHRMSIMSHRA
Sbjct: 414  AKFIRHPDGNEMSLMFSSRKRYADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRA 473

Query: 1441 RVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNNLCTPKNGDIL 1262
            R+MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL LMG+QNNLCTPK+G+IL
Sbjct: 474  RIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEIL 533

Query: 1261 VASTQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKPIELWTGKQLF 1082
            VASTQDFLTSSFLITRKDTFY+R +F L+CSYMGD  +  DLP+PA +KP+ELWTGKQLF
Sbjct: 534  VASTQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLF 593

Query: 1081 SVLVRPNAKMRVFVNFIVMEKNYSKTGETMCPNDGCVYFRNSELISGQLGKATLGNGNKS 902
             VL+RP +KMRV+VN  + EK+YS  GETMC +DG VYFRNSELISGQLGKATLGNGNK 
Sbjct: 594  HVLLRPYSKMRVYVNLTLTEKSYSGKGETMCSSDGFVYFRNSELISGQLGKATLGNGNKD 653

Query: 901  GLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGARLTAKKEERVTEGY 722
            GL+SVLLRDY ++AAA+CMNRLAKLSARWIGNHGFSIGIDDV PG  L  +K+  +   Y
Sbjct: 654  GLYSVLLRDYESHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNY 713

Query: 721  NKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGSVCLRELHWRNSPLIMS 542
             KC+  I  +N+GKL +QPGC+AAQTLEAE+T  LNK+R+  G +C++ L WRNSPLIMS
Sbjct: 714  KKCEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMS 773

Query: 541  QCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKKPAAKGFVANSFYTG 362
            QCGSKGSPINISQMIACVGQQSVGGRRAP+GFIDRSLPHFP   K PAAKGFVA+SF+ G
Sbjct: 774  QCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDG 833

Query: 361  LTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDGTVRSANSAIVQFL 182
            L+ATEFFFHTMGGREGLVDTAVKTA+TGYMSRRLMKALEDL+ +YD TVR+A++ IVQF+
Sbjct: 834  LSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFM 893

Query: 181  YGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSSALSVSELSKRVDERLSKHDMQP 2
            YGDD MDP  ME K G PLN  RL MK KATCP  G  +LS SE+ + V+ERLS HDM P
Sbjct: 894  YGDDGMDPSRMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTP 953


>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
            [Brachypodium distachyon]
          Length = 1392

 Score = 1235 bits (3195), Expect = 0.0
 Identities = 624/968 (64%), Positives = 741/968 (76%), Gaps = 15/968 (1%)
 Frame = -1

Query: 2866 PTVSINFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGI 2687
            P   +  TK+PF+ED G R+IKS+ F+  SG EI ++AE  V+   ++   D KP P+G+
Sbjct: 4    PEEKLRCTKEPFVEDVGTRRIKSMRFSMFSGKEIRQSAETQVWNNRIYG-NDMKPVPNGL 62

Query: 2686 LDTHLGTSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARV 2507
            LD  +G + K G+CATC+G + +CPGH+GY+KL LPVF+VG+F NIL++L+ ICK C+R+
Sbjct: 63   LDPRMGAANKFGECATCHGSYHECPGHFGYLKLVLPVFNVGFFNNILDVLKSICKGCSRI 122

Query: 2506 LLFEDDRKLFLRRMRNPRAEVLQKRALFKSINDKCKRVQRCPRCGDYNGTVKKLTSTLRI 2327
            LL E D++ FL++MRNPR E L K AL K + DKCK + RCP CG  NG  KK    L I
Sbjct: 123  LLHEKDQREFLKKMRNPRLEPLHKAALMKKVRDKCK-LSRCPSCGYINGVAKKGRPGLLI 181

Query: 2326 THEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDVL 2147
             H+  SK  D  +E   E   A+   KE K  ++ +   L P  VL+LF +M DEDC++L
Sbjct: 182  VHD-CSKTLDGSTE---ELRSALSHKKE-KLSISSVHT-LDPATVLSLFKRMTDEDCELL 235

Query: 2146 YLHGRPEKLIVTHMAVPPVVIRPSVITDGG--SNEDDITMKLLDIIKTNVRLHTELEAGG 1973
             L  RPEKLI+T +AVPPV IRPSV   GG  SNED IT  L +I+ TN  L   L+ G 
Sbjct: 236  NLGDRPEKLIITEIAVPPVPIRPSVFVGGGRMSNEDGITCILRNIVNTNSILKGILQNGD 295

Query: 1972 QITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRGFVQRLKGKQGRFRGNLSGKR 1793
             +  C + W LLQ+QV  YINSD P L     P+    RG VQRLKGK GRFRGNLSGKR
Sbjct: 296  PLMKCFDCWQLLQLQVVEYINSDAPSLTD---PQN---RGLVQRLKGKTGRFRGNLSGKR 349

Query: 1792 VDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYNIEKLRQRVSNGPQKYPGANY 1613
             ++TGRTVISPDPNL++TEVA+P+LMA VLTYPE+VS YNIEKLRQ + NGP K+PGAN+
Sbjct: 350  TEYTGRTVISPDPNLRITEVAIPVLMARVLTYPERVSYYNIEKLRQCIRNGPHKHPGANF 409

Query: 1612 IISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSLHRMSIMSHRARVM 1433
            +   DG++  +++ + R  A +LKYG IVERHLEDGDIVLFNRQPSLHRMSIMSHRAR+M
Sbjct: 410  VTQPDGTKLHLKYCDRRIAARDLKYGCIVERHLEDGDIVLFNRQPSLHRMSIMSHRARIM 469

Query: 1432 PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNNLCTPKNGDILVAS 1253
            PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAL LMG+QNNLCTPKNG+ILVAS
Sbjct: 470  PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 529

Query: 1252 TQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKPIELWTGKQLFSVL 1073
            TQDFLTSSFLITRKD FYDR  F L+CSY+GD  E+IDLPTPAI+KP+ELWTGKQLFSVL
Sbjct: 530  TQDFLTSSFLITRKDNFYDRSYFTLLCSYLGDAMENIDLPTPAIIKPLELWTGKQLFSVL 589

Query: 1072 VRPNAKMRVFVNFIVMEKNYSK-----------TGETMCPNDGCVYFRNSELISGQLGKA 926
            VRPNA  +V++N  V EK Y K             ETMCPNDG VYFRNSEL+SGQ+GK 
Sbjct: 590  VRPNACTKVYLNLTVEEKIYMKRRERDKNAVSVLEETMCPNDGYVYFRNSELLSGQVGKK 649

Query: 925  TLGNGNKSGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGARLTAKK 746
            TLGNGNK G+FSVL+RDYN++AAASCMNRLAK SAR+IGNHGFSIG+DDVQPG  L  KK
Sbjct: 650  TLGNGNKDGMFSVLVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGESLNQKK 709

Query: 745  EERVTEGYNKCDKHIDLYNKGK--LNLQPGCNAAQTLEAEITGELNKIRELAGSVCLREL 572
            ++ + +GY +C   I +Y+KG     L PGCN AQTLE  ++  LN++RE AG  C+  L
Sbjct: 710  KKTIDQGYTECHDLIAVYSKGAPGAELHPGCNRAQTLEVRVSAILNQLREKAGEHCMNTL 769

Query: 571  HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKKPAAK 392
            HWRNSPLIMSQCGSKGSPINISQM+ CVGQQSVGGRRAP+GFIDR+LPHFP + K PAAK
Sbjct: 770  HWRNSPLIMSQCGSKGSPINISQMVVCVGQQSVGGRRAPDGFIDRTLPHFPIHSKTPAAK 829

Query: 391  GFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDGTVR 212
            GFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS  YD TVR
Sbjct: 830  GFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVR 889

Query: 211  SANSAIVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPANGSSALSVSELSKRVD 32
            +A+S IVQF+YGDD MDPV MEGK G PLNLD+L MK KATCP  G   LS   + + ++
Sbjct: 890  NASSGIVQFVYGDDGMDPVKMEGKGGSPLNLDQLFMKVKATCPQRGHDMLSPEAIMQMLN 949

Query: 31   ERLSKHDM 8
            ++LS+ DM
Sbjct: 950  DKLSEQDM 957


>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine
            max]
          Length = 1391

 Score = 1233 bits (3191), Expect = 0.0
 Identities = 619/968 (63%), Positives = 750/968 (77%), Gaps = 12/968 (1%)
 Frame = -1

Query: 2875 NPGPTVSINFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCP 2696
            N   T  I FTK+PF+ED GPRKIK++ F+T+S +EI K AE+ V++ S +    +KP  
Sbjct: 2    NRARTEGITFTKEPFMEDTGPRKIKNMKFSTLSESEISKIAEVQVWKGSYYD-SFKKPIH 60

Query: 2695 HGILDTHLGTSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSC 2516
             G+LD  +G + K   CATC+G F DCPGHYGY+ LALPVF+VGY   I+ IL+CICK C
Sbjct: 61   GGLLDPRMGPANKSLVCATCDGNFHDCPGHYGYLNLALPVFNVGYLSTIVEILKCICKGC 120

Query: 2515 ARVLLFEDDRKLFLRRMRNPRAEVLQKRALFK-SINDKCKRVQRCPRCGDYNGTVKKLTS 2339
            AR+LL ED RK  L++MR+ +   L K    K  +   C +V  CPRCG  NG+VKKL +
Sbjct: 121  ARILLDEDTRKKHLKKMRSSKKSELDKIDFVKVRVIKDCSKVVNCPRCGYINGSVKKLPA 180

Query: 2338 TLRITHEKYSKAEDIRSEYLSEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDED 2159
            +L I H+        R+  + E   A+ + K+ +A  N     L P +VL+LF +M+DED
Sbjct: 181  SLTIIHD----CSKCRNYIVEELDSALSRMKDSRATTNVSNRILNPFQVLSLFKRMLDED 236

Query: 2158 CDVLYLHGRPEKLIVTHMAVPPVVIRPSVITDGG-SNEDDITMKLLDIIKTNVRLHTELE 1982
            C++LY+  RPEKLI+T++ VPP+ IRPSV+ D   SNE+DIT +L +II+ N  L  EL+
Sbjct: 237  CELLYVAERPEKLIMTNVVVPPIAIRPSVVMDESLSNENDITERLKNIIQANAVLRQELQ 296

Query: 1981 AGGQITHCMEAWDLLQVQVGLYINSDLPGLPSSMLPEGKPMRGFVQRLKGKQGRFRGNLS 1802
                 +  ++ WD+LQ +V  +INSD+ G+P  M P  K + GFVQRLKGK GRFRGNLS
Sbjct: 297  ESTFSSKFLDGWDILQNEVAQFINSDVRGIPFYMQPT-KQLAGFVQRLKGKHGRFRGNLS 355

Query: 1801 GKRVDFTGRTVISPDPNLKVTEVAVPMLMAMVLTYPEKVSRYNIEKLRQRVSNGPQKYPG 1622
            GKRV++TGRTVISPDPNLK++EVA+P+ MA +LTYPE+V+ +NIEKLRQ V NGP KYPG
Sbjct: 356  GKRVEYTGRTVISPDPNLKISEVAIPIHMARILTYPERVTHHNIEKLRQCVRNGPDKYPG 415

Query: 1621 ANYIISMDGSRQSIRHGNPRRLAAELKYGSIVERHLEDGDIVLFNRQPSLHRMSIMSHRA 1442
            A  +    G   S++    +R A EL+ G IV+RHLEDGDIVLFNRQPSLHRMSIM HRA
Sbjct: 416  ARMLRRDGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMCHRA 475

Query: 1441 RVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALSLMGIQNNLCTPKNGDIL 1262
            R+MPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA+ LMG++NNLCTPKNG+IL
Sbjct: 476  RIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVENNLCTPKNGEIL 535

Query: 1261 VASTQDFLTSSFLITRKDTFYDRCAFCLMCSYMGDGSEHIDLPTPAILKPIELWTGKQLF 1082
            VASTQDFLTSSFLITRKDTFYDR  F L+CSY+GDG + IDLPTPAI+KP+ELW+GKQLF
Sbjct: 536  VASTQDFLTSSFLITRKDTFYDRSTFSLICSYIGDGMDPIDLPTPAIVKPVELWSGKQLF 595

Query: 1081 SVLVRPNAKMRVFVNFIVMEKNYSKTGE---------TMCPNDGCVYFRNSELISGQLGK 929
            S+++RP+A MRV+VN  V E+NY++  +         T+CPNDG VYFRNSELISGQ+GK
Sbjct: 596  SIILRPHANMRVYVNLTVKERNYTEDKKIKDKKIEWKTLCPNDGFVYFRNSELISGQVGK 655

Query: 928  ATLGNGNKSGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGARLTAK 749
             TLGNGNK GLFSVLLRDY A+AAASCMNRLAKLSARWIGNHGFSIGIDDVQP   L  K
Sbjct: 656  VTLGNGNKDGLFSVLLRDYRAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPKEILINK 715

Query: 748  KEERVTEGYNKCDKHIDLYNKGKLNLQPGCNAAQTLEAEITGELNKIRELAGSVCLRELH 569
            K+E ++EGY +CDKHI+ +NKGKL L  GC+AAQTLE  ITG LN +R+ AG VC++ LH
Sbjct: 716  KDETISEGYRECDKHIEAFNKGKLELLAGCDAAQTLETRITGVLNGLRDTAGKVCMQTLH 775

Query: 568  WRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKKPAAKG 389
            WRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGRR PNGFIDRSLPHFPR  K PAAKG
Sbjct: 776  WRNSPLIMSQCGSKGSSINISQMVACVGQQSVGGRRTPNGFIDRSLPHFPRKSKTPAAKG 835

Query: 388  FVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDGTVRS 209
            FVANSFY+GL+ATEFFFHTMGGREGLVDTAVKTA+TGYMSR+LMK+LEDL  HYD TVR+
Sbjct: 836  FVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSLEDLFLHYDYTVRN 895

Query: 208  ANSAIVQFLYGDDAMDPVHMEGKDGEPLNLDRLLMKTKATCPAN-GSSALSVSELSKRVD 32
            A  +IVQF YGDD MDP  MEGK+G+PLN +RL +K+KA CP +     LS S++SK V 
Sbjct: 896  AGGSIVQFCYGDDGMDPAGMEGKNGKPLNFERLFLKSKAICPNDEDDEILSSSDVSKVVH 955

Query: 31   ERLSKHDM 8
            E+LS+ DM
Sbjct: 956  EKLSEFDM 963