BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00022641
         (1102 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002970424.1| hypothetical protein SELMODRAFT_410981 [Sela...   194   7e-47
ref|XP_001758254.1| predicted protein [Physcomitrella patens] gi...   165   3e-38
ref|XP_003386183.1| PREDICTED: polyubiquitin-like [Amphimedon qu...    65   6e-08
dbj|BAJ93248.1| predicted protein [Hordeum vulgare subsp. vulgare]     64   1e-07
ref|XP_002468737.1| predicted protein [Postia placenta Mad-698-R...    63   2e-07
ref|XP_002891806.1| predicted protein [Arabidopsis lyrata subsp....    63   2e-07
ref|XP_006138756.1| PREDICTED: polyubiquitin-C-like isoform X2 [...    62   3e-07
ref|XP_004339363.1| polyubiquitin, putative [Acanthamoeba castel...    62   3e-07
emb|CCD77669.1| putative ubiquitin (ribosomal protein L40) [Schi...    62   3e-07
emb|CBN79251.1| conserved unknown protein [Ectocarpus siliculosus]     62   3e-07
ref|XP_002897374.1| ubiquitin family protein, putative [Phytopht...    62   3e-07
sp|P22589.2|UBIQP_PHYIN RecName: Full=Polyubiquitin; Contains: R...    62   3e-07
ref|XP_005460956.1| PREDICTED: polyubiquitin-C-like [Oreochromis...    62   4e-07
gb|EJY82919.1| Ubiquitin [Oxytricha trifallax]                         62   4e-07
pdb|2Y5B|B Chain B, Structure Of Usp21 In Complex With Linear Di...    62   4e-07
gb|EGB12923.1| ubiquitin [Aureococcus anophagefferens]                 62   4e-07
gb|EGB08038.1| polyubiquitin [Aureococcus anophagefferens]             62   4e-07
gb|EGB04744.1| ubiquitin [Aureococcus anophagefferens]                 62   4e-07
gb|EDL19560.1| ubiquitin C, isoform CRA_a [Mus musculus] gi|1486...    62   4e-07
ref|XP_751791.1| polyubiquitin UbiD/Ubi4 [Aspergillus fumigatus ...    62   5e-07

>ref|XP_002970424.1| hypothetical protein SELMODRAFT_410981 [Selaginella moellendorffii]
            gi|300161940|gb|EFJ28554.1| hypothetical protein
            SELMODRAFT_410981 [Selaginella moellendorffii]
          Length = 589

 Score =  194 bits (492), Expect = 7e-47
 Identities = 118/289 (40%), Positives = 166/289 (57%), Gaps = 16/289 (5%)
 Frame = -3

Query: 1097 IKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQAH 918
            +K  I + TGI  S+QLLSSIG +MHD+F ++DF+G+HA+YE SI+DL  SGD+N EQAH
Sbjct: 206  LKDAIEKHTGILKSRQLLSSIGCVMHDEFCIKDFDGVHAIYEDSIVDLTVSGDTNNEQAH 265

Query: 917  RRIIVYLKVENH-TLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLAD 741
            RR++V + V  H    ++VQ  D V  +  IVE+  GIP W QRI FSG  LQDK TLA+
Sbjct: 266  RRMLVTVNVLGHEEFRLIVQGRDRVQDVTNIVEARTGIPQWQQRISFSGNTLQDKKTLAE 325

Query: 740  YFIYPECTVEVKARKNSVKTSLM-------------EESAPTPAARKLNVTRTRGGRNLG 600
            YF+ P+ T++V A K+ +K+S               ++ + TPAARKL + RT  G   G
Sbjct: 326  YFVCPQSTLQVAAFKSPLKSSFKAGKLFHAASENRDDDPSYTPAARKLKMVRTCKGVVAG 385

Query: 599  TITIPILTTDKLTDLKRKMKISLHPQGGRN--VGTAPFRANIDNHIQNNIPPLQDLTEQM 426
            TITIP+LT+D + DL+RK+K SL P    N  +GT P  ++   +      PL       
Sbjct: 386  TITIPVLTSDTVGDLRRKVKRSLRPLEETNFSIGTPPRNSSASVNCLTGPSPL------- 438

Query: 425  QKIQRASSVKERLPISTPITAATLRSPSHNVETAKYFTPQETTECFLTP 279
             K + A+S  +  P     T     +P   +      +PQ    C++TP
Sbjct: 439  -KPRPANSAHKLPPPPLADTPERFETPRARLPA----SPQTPQSCYVTP 482


>ref|XP_001758254.1| predicted protein [Physcomitrella patens] gi|162690710|gb|EDQ77076.1|
            predicted protein [Physcomitrella patens]
          Length = 701

 Score =  165 bits (417), Expect = 3e-38
 Identities = 90/215 (41%), Positives = 129/215 (60%), Gaps = 13/215 (6%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            DIK R+ ELT IP S QLLS +GR+MHD+F + DF G+H ++E S+IDLCK+ D   E+ 
Sbjct: 264  DIKHRLEELTAIPVSHQLLSCLGRVMHDEFLIRDFNGLHKIHEDSVIDLCKTDDKYTEKM 323

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
            HRR++V++  V     ++ V   D V S+++ VES +GI    Q+I +SGK+LQ+K TL 
Sbjct: 324  HRRMVVHVNVVGEEEFSITVHGRDTVLSILKCVESRIGIVPSQQKISYSGKLLQEKKTLG 383

Query: 743  DYFIYPECTVEV---KARKNSVKTSL---------MEESAPTPAARKLNVTRTRGGRNLG 600
             Y I P+  + V   K   N  K S           E S   P A KL + RT  G+  G
Sbjct: 384  SYLIEPDSVLTVTMSKCAGNLAKKSTSCDNKEDLPKEGSGQKPNATKLKLMRTSKGQVKG 443

Query: 599  TITIPILTTDKLTDLKRKMKISLHPQGGRNVGTAP 495
            T+TIP++++D + DL+RK+K +L P    N+  AP
Sbjct: 444  TLTIPVISSDTVADLQRKLKRTLAPLVEHNLSEAP 478


>ref|XP_003386183.1| PREDICTED: polyubiquitin-like [Amphimedon queenslandica]
          Length = 968

 Score = 64.7 bits (156), Expect = 6e-08
 Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 11/168 (6%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K +I E  GIP +QQ +   GR + DD+ +ED      +    I  L   G  +K   
Sbjct: 565  NVKTKIEETGGIPCNQQKIIYDGRQLEDDY-IED-----TLLPNKIKTLFDHGIKDKSTL 618

Query: 920  HRRI-------IVYLKVENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQ 762
            H  +       I    +   T+T+ V+PSD + ++   ++   GIP   QR++F+GK+L 
Sbjct: 619  HLLLRLRGGMQIFVKTLTGRTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKVLV 678

Query: 761  DKMTLADYFIYPECTVEVKARKNSVKT----SLMEESAPTPAARKLNV 630
            D  TL+DY I  + T++++ +    +      L+     TPA +  NV
Sbjct: 679  DDRTLSDYNIKTKDTIDLQHKGMETQPLNHYKLLTFYEHTPATKIWNV 726



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            +IK +I++  GIP  QQ L   GR + D   L D+     + + S + L        +  
Sbjct: 101  NIKAKIQDKEGIPPDQQRLIFAGRQLEDGRTLSDYN----IQKESTLHLVLRRRGGMQ-- 154

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
                 +++K +   T+T+ V+PSD + ++   ++   GIP   QR++F+GKIL+D  TL+
Sbjct: 155  -----IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKILEDGRTLS 209

Query: 743  DYFIYPECTVEV 708
            DY I  E T+ +
Sbjct: 210  DYNIQKESTLHL 221


>dbj|BAJ93248.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 245

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 1/156 (0%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            D+K +I+E  GIPA +Q L     ++ D   LED+    ++ E S + L        +  
Sbjct: 43   DVKDKIQEKEGIPAGEQRLMFGSELLVDSCSLEDY----SIEEESTLTL--------DLV 90

Query: 920  HRRIIVYLKVEN-HTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
             R + ++++  +  T+T+ V+  D + S+        GIP   QR+ F+GK L+D  TLA
Sbjct: 91   PRGMHIFIRTRSGKTMTIGVEGEDSLYSVKAKFFDETGIPPSRQRLFFAGKQLEDGRTLA 150

Query: 743  DYFIYPECTVEVKARKNSVKTSLMEESAPTPAARKL 636
            DY +  E T+ V  R  + ++  M  S  T   +K+
Sbjct: 151  DYDVQNESTLHVVLRGITRQSGEMRISVKTVTGKKV 186


>ref|XP_002468737.1| predicted protein [Postia placenta Mad-698-R]
            gi|220732122|gb|EED85960.1| predicted protein [Postia
            placenta Mad-698-R]
          Length = 289

 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 16/156 (10%)
 Frame = -3

Query: 1097 IKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFE-----GIHA------VYEGS----I 963
            +K++I E  GIPA  Q L   G+ + D   L D+E      +H         +GS    +
Sbjct: 138  LKQQIEEKLGIPADDQRLLFSGQELEDQRSLADYELQTDNTVHLSTRSTPARQGSARTTL 197

Query: 962  IDLCKSGDSNKEQAHRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRI 786
              L +   SN+E     + +++K +   T+ ++V P+D V SL++ VE   GIP   QR+
Sbjct: 198  QRLRRPAPSNEE-----VQIFVKNLNGKTMAIMVSPADTVKSLLEKVEVKTGIPPSQQRL 252

Query: 785  MFSGKILQDKMTLADYFIYPECTVEVKARKNSVKTS 678
            ++ GK L   M LADY I  E T+ +  R     TS
Sbjct: 253  LYGGKQLVPDMILADYNIQKESTLHLVLRLRGGGTS 288



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 39/138 (28%), Positives = 74/138 (53%), Gaps = 7/138 (5%)
 Frame = -3

Query: 905 VYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLADYFIY 729
           +Y++ V + ++ V +   + V  L Q +E  LGIP+ +QR++FSG+ L+D+ +LADY + 
Sbjct: 115 IYIRTVGDQSIAVTLSMDEKVLVLKQQIEEKLGIPADDQRLLFSGQELEDQRSLADYELQ 174

Query: 728 PECTVEVK-----ARKNSVKTSLMEESAPTPAARKLNV-TRTRGGRNLGTITIPILTTDK 567
            + TV +      AR+ S +T+L     P P+  ++ +  +   G+ +  +  P  T   
Sbjct: 175 TDNTVHLSTRSTPARQGSARTTLQRLRRPAPSNEEVQIFVKNLNGKTMAIMVSPADTVKS 234

Query: 566 LTDLKRKMKISLHPQGGR 513
           L + K ++K  + P   R
Sbjct: 235 LLE-KVEVKTGIPPSQQR 251


>ref|XP_002891806.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297337648|gb|EFH68065.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 384

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 50/195 (25%), Positives = 93/195 (47%), Gaps = 8/195 (4%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K +I+++ GIP  QQ L   G+++ D   L D+    ++ + SI+ L        +  
Sbjct: 27   NVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADY----SIQKESILHLALRLRGGMQ-- 80

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
                 +++K +   T+T+ V+ SD + ++   ++   GIP   QR++F+GK L+D  TLA
Sbjct: 81   -----IFIKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 135

Query: 743  DYFIYPECTVEVKARKNSVKTSLMEESAPTPAARKLNVTRTRGGRNL-------GTITIP 585
            DY I  E T+ +                         V R RGG  +        TIT+ 
Sbjct: 136  DYNIQKESTLHL-------------------------VLRLRGGMQIFVKTLTGKTITLE 170

Query: 584  ILTTDKLTDLKRKMK 540
            + ++D + ++K K++
Sbjct: 171  VESSDTIDNVKAKIQ 185



 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 8/195 (4%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K +I++  GIP  QQ L   G+ + D   L D+     + + S + L        +  
Sbjct: 103  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN----IQKESTLHLVLRLRGGMQ-- 156

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
                 +++K +   T+T+ V+ SD + ++   ++   GIP   QR++F+GK L+D  TLA
Sbjct: 157  -----IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 211

Query: 743  DYFIYPECTVEVKARKNSVKTSLMEESAPTPAARKLNVTRTRGGRNL-------GTITIP 585
            DY I  E T+ +                         V R RGG  +        TIT+ 
Sbjct: 212  DYNIQKESTLHL-------------------------VLRLRGGMQIFVKTLTGKTITLE 246

Query: 584  ILTTDKLTDLKRKMK 540
            + ++D + +LK K++
Sbjct: 247  VESSDTIDNLKTKIQ 261



 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 8/195 (4%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K +I++  GIP  QQ L   G+ + D   L D+     + + S + L        +  
Sbjct: 179  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN----IQKESTLHLVLRLRGGMQ-- 232

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
                 +++K +   T+T+ V+ SD + +L   ++   GIP   QR++F+GK L+D  TLA
Sbjct: 233  -----IFVKTLTGKTITLEVESSDTIDNLKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 287

Query: 743  DYFIYPECTVEVKARKNSVKTSLMEESAPTPAARKLNVTRTRGGRNL-------GTITIP 585
            DY I  E T+ +                         V R RGG  +        TIT+ 
Sbjct: 288  DYNIQKESTLHL-------------------------VLRLRGGMQIFVKTLTGKTITLE 322

Query: 584  ILTTDKLTDLKRKMK 540
            + ++D + ++K K++
Sbjct: 323  VESSDTIDNVKAKIQ 337


>ref|XP_006138756.1| PREDICTED: polyubiquitin-C-like isoform X2 [Pelodiscus sinensis]
          Length = 383

 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 40/135 (29%), Positives = 73/135 (54%), Gaps = 1/135 (0%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K +I++  GIP  QQ L   G+ + D   L D+     + + S + L       + + 
Sbjct: 253  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN----IQKESTLHLVL-----RLRG 303

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
              +I +++K +   T+T+ V+PSD + ++   ++   GIP   QR++F+GK L+D  TL+
Sbjct: 304  GMQIFIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 363

Query: 743  DYFIYPECTVEVKAR 699
            DY I  E T+ +  R
Sbjct: 364  DYNIQKESTLHLVLR 378



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 8/195 (4%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K +I++  GIP  QQ L   G+ + D   L D+     + + S + L        +  
Sbjct: 25   NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN----IQKESTLHLVLRLRGGMQ-- 78

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
                 +++K +   T+T+ V+PSD + ++   ++   GIP   QR++F+GK L+D  TL+
Sbjct: 79   -----IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 133

Query: 743  DYFIYPECTVEVKARKNSVKTSLMEESAPTPAARKLNVTRTRGGRNL-------GTITIP 585
            DY I  E T+ +                         V R RGG  +        TIT+ 
Sbjct: 134  DYNIQKESTLHL-------------------------VLRLRGGMQIFVKTLTGKTITLE 168

Query: 584  ILTTDKLTDLKRKMK 540
            +  +D + ++K K++
Sbjct: 169  VEPSDTIENVKAKIQ 183



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 8/195 (4%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K +I++  GIP  QQ L   G+ + D   L D+     + + S + L        +  
Sbjct: 101  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN----IQKESTLHLVLRLRGGMQ-- 154

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
                 +++K +   T+T+ V+PSD + ++   ++   GIP   QR++F+GK L+D  TL+
Sbjct: 155  -----IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 209

Query: 743  DYFIYPECTVEVKARKNSVKTSLMEESAPTPAARKLNVTRTRGGRNL-------GTITIP 585
            DY I  E T+ +                         V R RGG  +        TIT+ 
Sbjct: 210  DYNIQKESTLHL-------------------------VLRLRGGMQIFVKTLTGKTITLE 244

Query: 584  ILTTDKLTDLKRKMK 540
            +  +D + ++K K++
Sbjct: 245  VEPSDTIENVKAKIQ 259



 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 39/135 (28%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K +I++  GIP  QQ L   G+ + D   L D+     + + S + L        +  
Sbjct: 177  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN----IQKESTLHLVLRLRGGMQ-- 230

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
                 +++K +   T+T+ V+PSD + ++   ++   GIP   QR++F+GK L+D  TL+
Sbjct: 231  -----IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 285

Query: 743  DYFIYPECTVEVKAR 699
            DY I  E T+ +  R
Sbjct: 286  DYNIQKESTLHLVLR 300


>ref|XP_004339363.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
            gi|440796241|gb|ELR17350.1| polyubiquitin, putative
            [Acanthamoeba castellanii str. Neff]
          Length = 220

 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 48/194 (24%), Positives = 89/194 (45%), Gaps = 7/194 (3%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K++I++  GIP  QQ L   G+ + D   L D+                   + ++++
Sbjct: 25   NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY-------------------NIQKES 65

Query: 920  HRRIIVYLKVENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLAD 741
               +I    +   T+T+ V+ SD + ++ Q ++   GIP   QR++F+GK L+D  TLAD
Sbjct: 66   TLHLIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 125

Query: 740  YFIYPECTVEVKARKNSVKTSLMEESAPTPAARKLNVTRTRGGRNL-------GTITIPI 582
            Y I  E T+ +                         V R RGG  +        TIT+ +
Sbjct: 126  YNIQKESTLHL-------------------------VLRLRGGMQIFVKTLTGKTITLEV 160

Query: 581  LTTDKLTDLKRKMK 540
             ++D + ++K+K++
Sbjct: 161  ESSDTIENVKQKIQ 174



 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 40/135 (29%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K++I++  GIP  QQ L   G+ + D   L D+     + + S + L        +  
Sbjct: 92   NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN----IQKESTLHLVLRLRGGMQ-- 145

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
                 +++K +   T+T+ V+ SD + ++ Q ++   GIP   QR++F+GK L+D  TLA
Sbjct: 146  -----IFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLA 200

Query: 743  DYFIYPECTVEVKAR 699
            DY I  E T+ +  R
Sbjct: 201  DYNIQKESTLHLVLR 215


>emb|CCD77669.1| putative ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
          Length = 379

 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 51/198 (25%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFE---GIHAVYEGSIIDLCKSGDSNK 930
            ++K +I++  GIP  QQ L   G+ + D   L D+     +  V+E +            
Sbjct: 101  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQTELIVVHENT------------ 148

Query: 929  EQAHRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKM 753
                RR+ +++K +   T+T+ V+PSD + ++   ++   GIP   QR++F+GK L+D  
Sbjct: 149  ----RRMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 204

Query: 752  TLADYFIYPECTVEVKARKNSVKTSLMEESAPTPAARKLNVTRTRGGRNL-------GTI 594
            TL+DY I  E T+ +                         V R RGG  +        TI
Sbjct: 205  TLSDYNIQKESTLHL-------------------------VLRLRGGMQIFVKTLTGKTI 239

Query: 593  TIPILTTDKLTDLKRKMK 540
            T+ +  +D + ++K K++
Sbjct: 240  TLEVEPSDTIENVKAKIQ 257



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 8/195 (4%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K +I++  GIP  QQ L   G+ + D   L D+     + + S + L        +  
Sbjct: 175  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN----IQKESTLHLVLRLRGGMQ-- 228

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
                 +++K +   T+T+ V+PSD + ++   ++   GIP   QR++F+GK L+D  TL+
Sbjct: 229  -----IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 283

Query: 743  DYFIYPECTVEVKARKNSVKTSLMEESAPTPAARKLNVTRTRGGRNL-------GTITIP 585
            DY I  E T+ +                         V R RGG  +        TIT+ 
Sbjct: 284  DYNIQKESTLHL-------------------------VLRLRGGMQIFVKTLTGKTITLE 318

Query: 584  ILTTDKLTDLKRKMK 540
            +  +D + ++K K++
Sbjct: 319  VEPSDTIENVKAKIQ 333



 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 39/135 (28%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K +I++  GIP  QQ L   G+ + D   L D+     + + S + L        +  
Sbjct: 251  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN----IQKESTLHLVLRLRGGMQ-- 304

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
                 +++K +   T+T+ V+PSD + ++   ++   GIP   QR++F+GK L+D  TL+
Sbjct: 305  -----IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 359

Query: 743  DYFIYPECTVEVKAR 699
            DY I  E T+ +  R
Sbjct: 360  DYNIQKESTLHLVLR 374


>emb|CBN79251.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 380

 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 15/201 (7%)
 Frame = -3

Query: 1097 IKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQAH 918
            +K++I++  GIP  QQ L   G+ + D   L D+  I  + +G  +      +  KE   
Sbjct: 87   VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN-IQKLEDGRTLS---DYNIQKESTL 142

Query: 917  RRII-------VYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQ 762
              ++       +++K +   T+T+ V+PSD +  + Q ++   GIP   QR++F+GK L+
Sbjct: 143  HLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLE 202

Query: 761  DKMTLADYFIYPECTVEVKARKNSVKTSLMEESAPTPAARKLNVTRTRGGRNL------- 603
            D  TL+DY I  E T+ +                         V R RGG  +       
Sbjct: 203  DGRTLSDYNIQKESTLHL-------------------------VLRLRGGMQIFVKTLTG 237

Query: 602  GTITIPILTTDKLTDLKRKMK 540
             TIT+ +  +D +  +K+K++
Sbjct: 238  KTITLDVEPSDTIDGVKQKIQ 258



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 8/194 (4%)
 Frame = -3

Query: 1097 IKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQAH 918
            +K++I++  GIP  QQ L   G+ + D   L D+     + + S + L        +   
Sbjct: 177  VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN----IQKESTLHLVLRLRGGMQ--- 229

Query: 917  RRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLAD 741
                +++K +   T+T+ V+PSD +  + Q ++   GIP   QR++F+GK L+D  TL+D
Sbjct: 230  ----IFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 285

Query: 740  YFIYPECTVEVKARKNSVKTSLMEESAPTPAARKLNVTRTRGGRNL-------GTITIPI 582
            Y I  E T+ +                         V R RGG  +        TIT+ +
Sbjct: 286  YNIQKESTLHL-------------------------VLRLRGGMQIFVKTLTGKTITLDV 320

Query: 581  LTTDKLTDLKRKMK 540
              +D +  +K+K++
Sbjct: 321  EPSDTIDGVKQKIQ 334



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
 Frame = -3

Query: 1097 IKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQAH 918
            +K++I++  GIP  QQ L   G+ + D   L D+     + + S + L        +   
Sbjct: 253  VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN----IQKESTLHLVLRLRGGMQ--- 305

Query: 917  RRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLAD 741
                +++K +   T+T+ V+PSD +  + Q ++   GIP   QR++F+GK L+D  TL+D
Sbjct: 306  ----IFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 361

Query: 740  YFIYPECTVEVKAR 699
            Y I  E T+ +  R
Sbjct: 362  YNIQKESTLHLVLR 375


>ref|XP_002897374.1| ubiquitin family protein, putative [Phytophthora infestans T30-4]
            gi|262107065|gb|EEY65117.1| ubiquitin family protein,
            putative [Phytophthora infestans T30-4]
            gi|348684366|gb|EGZ24181.1| hypothetical protein
            PHYSODRAFT_353926 [Phytophthora sojae]
          Length = 305

 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 50/195 (25%), Positives = 92/195 (47%), Gaps = 8/195 (4%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K++I++  GIP  QQ L   G+ + D   L D+     + + S + L        +  
Sbjct: 25   NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN----IQKESTLHLVLRLRGGMQ-- 78

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
                 +++K +   T+T+ V+PSD + ++ Q ++   GIP   QR++F+GK L+D  TL+
Sbjct: 79   -----IFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 133

Query: 743  DYFIYPECTVEVKARKNSVKTSLMEESAPTPAARKLNVTRTRGGRNL-------GTITIP 585
            DY I  E T+ +                         V R RGG  +        TIT+ 
Sbjct: 134  DYNIQKESTLHL-------------------------VLRLRGGMQIFVKTLTGKTITLD 168

Query: 584  ILTTDKLTDLKRKMK 540
            +  +D + ++K+K++
Sbjct: 169  VEPSDSIDNVKQKIQ 183



 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 50/195 (25%), Positives = 92/195 (47%), Gaps = 8/195 (4%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K++I++  GIP  QQ L   G+ + D   L D+     + + S + L        +  
Sbjct: 101  NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN----IQKESTLHLVLRLRGGMQ-- 154

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
                 +++K +   T+T+ V+PSD + ++ Q ++   GIP   QR++F+GK L+D  TL+
Sbjct: 155  -----IFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 209

Query: 743  DYFIYPECTVEVKARKNSVKTSLMEESAPTPAARKLNVTRTRGGRNL-------GTITIP 585
            DY I  E T+ +                         V R RGG  +        TIT+ 
Sbjct: 210  DYNIQKESTLHL-------------------------VLRLRGGMQIFVKTLTGKTITLD 244

Query: 584  ILTTDKLTDLKRKMK 540
            +  +D + ++K+K++
Sbjct: 245  VEPSDSIDNVKQKIQ 259



 Score = 60.8 bits (146), Expect = 9e-07
 Identities = 40/135 (29%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K++I++  GIP  QQ L   G+ + D   L D+     + + S + L        +  
Sbjct: 177  NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN----IQKESTLHLVLRLRGGMQ-- 230

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
                 +++K +   T+T+ V+PSD + ++ Q ++   GIP   QR++F+GK L+D  TL+
Sbjct: 231  -----IFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 285

Query: 743  DYFIYPECTVEVKAR 699
            DY I  E T+ +  R
Sbjct: 286  DYNIQKESTLHLVLR 300


>sp|P22589.2|UBIQP_PHYIN RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
            Flags: Precursor gi|3176|emb|CAA39250.1| ubiquitin
            [Phytophthora infestans] gi|348684114|gb|EGZ23929.1|
            hypothetical protein PHYSODRAFT_284823 [Phytophthora
            sojae]
          Length = 229

 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 50/195 (25%), Positives = 92/195 (47%), Gaps = 8/195 (4%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K++I++  GIP  QQ L   G+ + D   L D+     + + S + L        +  
Sbjct: 25   NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN----IQKESTLHLVLRLRGGMQ-- 78

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
                 +++K +   T+T+ V+PSD + ++ Q ++   GIP   QR++F+GK L+D  TL+
Sbjct: 79   -----IFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 133

Query: 743  DYFIYPECTVEVKARKNSVKTSLMEESAPTPAARKLNVTRTRGGRNL-------GTITIP 585
            DY I  E T+ +                         V R RGG  +        TIT+ 
Sbjct: 134  DYNIQKESTLHL-------------------------VLRLRGGMQIFVKTLTGKTITLD 168

Query: 584  ILTTDKLTDLKRKMK 540
            +  +D + ++K+K++
Sbjct: 169  VEPSDSIDNVKQKIQ 183



 Score = 60.8 bits (146), Expect = 9e-07
 Identities = 40/135 (29%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K++I++  GIP  QQ L   G+ + D   L D+     + + S + L        +  
Sbjct: 101  NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN----IQKESTLHLVLRLRGGMQ-- 154

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
                 +++K +   T+T+ V+PSD + ++ Q ++   GIP   QR++F+GK L+D  TL+
Sbjct: 155  -----IFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 209

Query: 743  DYFIYPECTVEVKAR 699
            DY I  E T+ +  R
Sbjct: 210  DYNIQKESTLHLVLR 224


>ref|XP_005460956.1| PREDICTED: polyubiquitin-C-like [Oreochromis niloticus]
          Length = 235

 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 16/150 (10%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHD-----DFKLEDFEGIHAVYEGSIIDLCKSGDS 936
            ++K +I++  GIP  QQ L   G+ + D     D+ ++    +H V  G  ++  ++   
Sbjct: 25   NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLAGKQLEDGRTLSD 84

Query: 935  NKEQAHRRIIVYLKVENH-----------TLTVVVQPSDFVASLMQIVESHLGIPSWNQR 789
               Q    + + L++  +           T+T+ V+PSD + ++   ++   GIP   QR
Sbjct: 85   YNIQKESTLHLVLRLRENMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 144

Query: 788  IMFSGKILQDKMTLADYFIYPECTVEVKAR 699
            ++F+GK L+D  TL+DY I  E T+ +  R
Sbjct: 145  LIFAGKQLEDGRTLSDYNIQKESTLHLVLR 174


>gb|EJY82919.1| Ubiquitin [Oxytricha trifallax]
          Length = 379

 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 1/135 (0%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K +I++  GIP  QQ L   G+ + D   L D+     +Y            S   Q 
Sbjct: 253  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYTS-RKIYS-----------SFGPQT 300

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
             R   +++K +   T+T+ V+PSD + ++   ++   GIP   QR++F+GK L+D  TL+
Sbjct: 301  QRWYAIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 360

Query: 743  DYFIYPECTVEVKAR 699
            DY I  E T+ +  R
Sbjct: 361  DYNIQKESTLHLVLR 375



 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 8/195 (4%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K +I++  GIP  QQ L   G+ + D   L D+     + + S + L        +  
Sbjct: 25   NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN----IQKESTLHLVLRLRGGMQ-- 78

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
                 +++K +   T+T+ V+PSD + ++   ++   GIP   QR++F+GK L+D  TL+
Sbjct: 79   -----IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 133

Query: 743  DYFIYPECTVEVKARKNSVKTSLMEESAPTPAARKLNVTRTRGGRNL-------GTITIP 585
            DY I  E T+ +                         V R RGG  +        TIT+ 
Sbjct: 134  DYNIQKESTLHL-------------------------VLRLRGGMQIFVKTLTGKTITLD 168

Query: 584  ILTTDKLTDLKRKMK 540
            +  +D + ++K K++
Sbjct: 169  VEPSDTIENVKAKIQ 183



 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 8/195 (4%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K +I++  GIP  QQ L   G+ + D   L D+     + + S + L        +  
Sbjct: 101  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN----IQKESTLHLVLRLRGGMQ-- 154

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
                 +++K +   T+T+ V+PSD + ++   ++   GIP   QR++F+GK L+D  TL+
Sbjct: 155  -----IFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 209

Query: 743  DYFIYPECTVEVKARKNSVKTSLMEESAPTPAARKLNVTRTRGGRNL-------GTITIP 585
            DY I  E T+ +                         V R RGG  +        TIT+ 
Sbjct: 210  DYNIQKESTLHL-------------------------VLRLRGGMQIFVKTLTGKTITLD 244

Query: 584  ILTTDKLTDLKRKMK 540
            +  +D + ++K K++
Sbjct: 245  VEPSDTIENVKAKIQ 259


>pdb|2Y5B|B Chain B, Structure Of Usp21 In Complex With Linear
            Diubiquitin-Aldehyde gi|374073978|pdb|2Y5B|F Chain F,
            Structure Of Usp21 In Complex With Linear
            Diubiquitin-Aldehyde
          Length = 152

 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 41/134 (30%), Positives = 71/134 (52%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K +I++  GIP  QQ L   G+ + D   L D+     + + S + L       + + 
Sbjct: 25   NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN----IQKESTLHLVL-----RLRG 75

Query: 920  HRRIIVYLKVENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLAD 741
            H +I V   +   T+T+ V+PSD + ++   ++   GIP   QR++F+GK L+D  TL+D
Sbjct: 76   HMQIFVKT-LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 134

Query: 740  YFIYPECTVEVKAR 699
            Y I  E T+ +  R
Sbjct: 135  YNIQKESTLHLVLR 148


>gb|EGB12923.1| ubiquitin [Aureococcus anophagefferens]
          Length = 250

 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 5/140 (3%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKE-- 927
            ++K++I++  GIP+ QQ L   G+   D   L D   ++      ++ L K  +   E  
Sbjct: 101  NVKQKIQDKEGIPSDQQRLIFKGKQFEDGRTLSDCSILNYSTLHLVLRLLKEPEREPESE 160

Query: 926  ---QAHRRIIVYLKVENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDK 756
               ++    IV   +   T+T+VV+PSD + ++ Q ++   GIP   QR++F GK  +D 
Sbjct: 161  PEPESELEQIVVKTLTGKTITLVVEPSDTIGNVKQKIQDKEGIPPDQQRLIFKGKQFEDG 220

Query: 755  MTLADYFIYPECTVEVKARK 696
            +TL+D  I  + T  +  R+
Sbjct: 221  LTLSDCNIPNKSTFHLVLRR 240



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 51/189 (26%), Positives = 95/189 (50%), Gaps = 2/189 (1%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K++I +  GIP  +Q L   GR + D   L D+     + + S + L        +  
Sbjct: 25   NVKQKIEDKEGIPPDRQRLIFCGRQLEDGPTLIDYN----IQKQSTLHLVLRLGGPPQ-- 78

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
                 +++K +   T+T+ V+PSD + ++ Q ++   GIPS  QR++F GK  +D  TL+
Sbjct: 79   -----IFVKTLTGKTITLDVEPSDTIGNVKQKIQDKEGIPSDQQRLIFKGKQFEDGRTLS 133

Query: 743  DYFIYPECTVEVKARKNSVKTSLMEESAPTPAAR-KLNVTRTRGGRNLGTITIPILTTDK 567
            D  I    T+ +  R    +     ES P P +  +  V +T  G+   TIT+ +  +D 
Sbjct: 134  DCSILNYSTLHLVLRLLK-EPEREPESEPEPESELEQIVVKTLTGK---TITLVVEPSDT 189

Query: 566  LTDLKRKMK 540
            + ++K+K++
Sbjct: 190  IGNVKQKIQ 198


>gb|EGB08038.1| polyubiquitin [Aureococcus anophagefferens]
          Length = 305

 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 50/195 (25%), Positives = 92/195 (47%), Gaps = 8/195 (4%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K++I++  GIP  QQ L   G+ + D   L D+     + + S + L        +  
Sbjct: 25   NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN----IQKESTLHLVLRLRGGMQ-- 78

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
                 +++K +   T+T+ V+PSD + ++ Q ++   GIP   QR++F+GK L+D  TL+
Sbjct: 79   -----IFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 133

Query: 743  DYFIYPECTVEVKARKNSVKTSLMEESAPTPAARKLNVTRTRGGRNL-------GTITIP 585
            DY I  E T+ +                         V R RGG  +        TIT+ 
Sbjct: 134  DYNIQKESTLHL-------------------------VLRLRGGMQIFVKTLTGKTITLD 168

Query: 584  ILTTDKLTDLKRKMK 540
            +  +D + ++K+K++
Sbjct: 169  VEPSDTIDNVKQKIQ 183



 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 50/195 (25%), Positives = 92/195 (47%), Gaps = 8/195 (4%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K++I++  GIP  QQ L   G+ + D   L D+     + + S + L        +  
Sbjct: 101  NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN----IQKESTLHLVLRLRGGMQ-- 154

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
                 +++K +   T+T+ V+PSD + ++ Q ++   GIP   QR++F+GK L+D  TL+
Sbjct: 155  -----IFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 209

Query: 743  DYFIYPECTVEVKARKNSVKTSLMEESAPTPAARKLNVTRTRGGRNL-------GTITIP 585
            DY I  E T+ +                         V R RGG  +        TIT+ 
Sbjct: 210  DYNIQKESTLHL-------------------------VLRLRGGMQIFVKTLTGKTITLD 244

Query: 584  ILTTDKLTDLKRKMK 540
            +  +D + ++K+K++
Sbjct: 245  VEPSDTIDNVKQKIQ 259



 Score = 60.8 bits (146), Expect = 9e-07
 Identities = 40/135 (29%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K++I++  GIP  QQ L   G+ + D   L D+     + + S + L        +  
Sbjct: 177  NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN----IQKESTLHLVLRLRGGMQ-- 230

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
                 +++K +   T+T+ V+PSD + ++ Q ++   GIP   QR++F+GK L+D  TL+
Sbjct: 231  -----IFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 285

Query: 743  DYFIYPECTVEVKAR 699
            DY I  E T+ +  R
Sbjct: 286  DYNIQKESTLHLVLR 300


>gb|EGB04744.1| ubiquitin [Aureococcus anophagefferens]
          Length = 229

 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 50/195 (25%), Positives = 92/195 (47%), Gaps = 8/195 (4%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K++I++  GIP  QQ L   G+ + D   L D+     + + S + L        +  
Sbjct: 25   NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN----IQKESTLHLVLRLRGGMQ-- 78

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
                 +++K +   T+T+ V+PSD + ++ Q ++   GIP   QR++F+GK L+D  TL+
Sbjct: 79   -----IFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 133

Query: 743  DYFIYPECTVEVKARKNSVKTSLMEESAPTPAARKLNVTRTRGGRNL-------GTITIP 585
            DY I  E T+ +                         V R RGG  +        TIT+ 
Sbjct: 134  DYNIQKESTLHL-------------------------VLRLRGGMQIFVKTLTGKTITLD 168

Query: 584  ILTTDKLTDLKRKMK 540
            +  +D + ++K+K++
Sbjct: 169  VEPSDTIDNVKQKIQ 183



 Score = 60.8 bits (146), Expect = 9e-07
 Identities = 40/135 (29%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K++I++  GIP  QQ L   G+ + D   L D+     + + S + L        +  
Sbjct: 101  NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN----IQKESTLHLVLRLRGGMQ-- 154

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
                 +++K +   T+T+ V+PSD + ++ Q ++   GIP   QR++F+GK L+D  TL+
Sbjct: 155  -----IFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 209

Query: 743  DYFIYPECTVEVKAR 699
            DY I  E T+ +  R
Sbjct: 210  DYNIQKESTLHLVLR 224


>gb|EDL19560.1| ubiquitin C, isoform CRA_a [Mus musculus] gi|148687614|gb|EDL19561.1|
            ubiquitin C, isoform CRA_a [Mus musculus]
          Length = 614

 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 19/206 (9%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K +I++  GIP  QQ L   G+ + D   L D+     + + S + L        +  
Sbjct: 101  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN----IQKESTLHLVLRLRGGMQ-- 154

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
                 +++K +   T+T+ V+PSD + ++   ++   GIP   QR++F+GK L+D  TL+
Sbjct: 155  -----IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 209

Query: 743  DYFIYPECTVEVKARKNSVKTSLMEESAPTPAARKLN-----------VTRTRGGRNL-- 603
            DY I  E T+ +  R        M+    T   + +N           V R RGG  +  
Sbjct: 210  DYNIQKESTLHLVLRLRGG----MQIFVKTLTGKTINYNIQKESTLHLVLRLRGGMQIFV 265

Query: 602  -----GTITIPILTTDKLTDLKRKMK 540
                  TIT+ +  +D + ++K K++
Sbjct: 266  KTLTGKTITLEVEPSDTIENVKAKIQ 291



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 8/195 (4%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K +I++  GIP  QQ L   G+ + D   L D+     + + S + L        +  
Sbjct: 25   NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN----IQKESTLHLVLRLRGGMQ-- 78

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
                 +++K +   T+T+ V+PSD + ++   ++   GIP   QR++F+GK L+D  TL+
Sbjct: 79   -----IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 133

Query: 743  DYFIYPECTVEVKARKNSVKTSLMEESAPTPAARKLNVTRTRGGRNL-------GTITIP 585
            DY I  E T+ +                         V R RGG  +        TIT+ 
Sbjct: 134  DYNIQKESTLHL-------------------------VLRLRGGMQIFVKTLTGKTITLE 168

Query: 584  ILTTDKLTDLKRKMK 540
            +  +D + ++K K++
Sbjct: 169  VEPSDTIENVKAKIQ 183



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 8/195 (4%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K +I++  GIP  QQ L   G+ + D   L D+     + + S + L        +  
Sbjct: 285  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN----IQKESTLHLVLRLRGGMQ-- 338

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
                 +++K +   T+T+ V+PSD + ++   ++   GIP   QR++F+GK L+D  TL+
Sbjct: 339  -----IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 393

Query: 743  DYFIYPECTVEVKARKNSVKTSLMEESAPTPAARKLNVTRTRGGRNL-------GTITIP 585
            DY I  E T+ +                         V R RGG  +        TIT+ 
Sbjct: 394  DYNIQKESTLHL-------------------------VLRLRGGMQIFVKTLTGKTITLE 428

Query: 584  ILTTDKLTDLKRKMK 540
            +  +D + ++K K++
Sbjct: 429  VEPSDTIENVKAKIQ 443



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 8/195 (4%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K +I++  GIP  QQ L   G+ + D   L D+     + + S + L        +  
Sbjct: 361  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN----IQKESTLHLVLRLRGGMQ-- 414

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
                 +++K +   T+T+ V+PSD + ++   ++   GIP   QR++F+GK L+D  TL+
Sbjct: 415  -----IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 469

Query: 743  DYFIYPECTVEVKARKNSVKTSLMEESAPTPAARKLNVTRTRGGRNL-------GTITIP 585
            DY I  E T+ +                         V R RGG  +        TIT+ 
Sbjct: 470  DYNIQKESTLHL-------------------------VLRLRGGMQIFVKTLTGKTITLE 504

Query: 584  ILTTDKLTDLKRKMK 540
            +  +D + ++K K++
Sbjct: 505  VEPSDTIENVKAKIQ 519



 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 39/135 (28%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLCKSGDSNKEQA 921
            ++K +I++  GIP  QQ L   G+ + D   L D+     + + S + L        +  
Sbjct: 437  NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN----IQKESTLHLVLRLRGGMQ-- 490

Query: 920  HRRIIVYLK-VENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMTLA 744
                 +++K +   T+T+ V+PSD + ++   ++   GIP   QR++F+GK L+D  TL+
Sbjct: 491  -----IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 545

Query: 743  DYFIYPECTVEVKAR 699
            DY I  E T+ +  R
Sbjct: 546  DYNIQKESTLHLVLR 560


>ref|XP_751791.1| polyubiquitin UbiD/Ubi4 [Aspergillus fumigatus Af293]
            gi|66849425|gb|EAL89753.1| polyubiquitin UbiD/Ubi4,
            putative [Aspergillus fumigatus Af293]
            gi|159125290|gb|EDP50407.1| polyubiquitin UbiD/Ubi4,
            putative [Aspergillus fumigatus A1163]
          Length = 314

 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
 Frame = -3

Query: 1100 DIKRRIRELTGIPASQQLLSSIGRIMHDDFKLEDFEGIHAVYEGSIIDLC---KSGDSNK 930
            ++K +I++  GIP  QQ L   G+ + D   L D+     + + S + L    + G    
Sbjct: 25   NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN----IQKESTLHLVLRLRGGMQIW 80

Query: 929  EQAHRRIIVYLKVENHTLTVVVQPSDFVASLMQIVESHLGIPSWNQRIMFSGKILQDKMT 750
              A   I V   +   T+T+ V+ SD + ++   ++   GIP   QR++F+GK L+D  T
Sbjct: 81   SPADSLITVVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 140

Query: 749  LADYFIYPECTVEVKARKNSVKTSLMEESAPTPAARKLNVTRTRGGRNL-------GTIT 591
            L+DY I  E T+ +                         V R RGG  +        TIT
Sbjct: 141  LSDYNIQKESTLHL-------------------------VLRLRGGMQIFVKTLTGKTIT 175

Query: 590  IPILTTDKLTDLKRKMK 540
            + + ++D + ++K K++
Sbjct: 176  LEVESSDTIDNVKSKIQ 192