BLASTX nr result
ID: Ephedra25_contig00022582
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00022582
(472 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY27823.1| Pentatricopeptide repeat (PPR) superfamily protei... 100 2e-19
ref|XP_004504222.1| PREDICTED: pentatricopeptide repeat-containi... 100 3e-19
ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containi... 100 3e-19
emb|CBI20738.3| unnamed protein product [Vitis vinifera] 100 3e-19
emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera] 100 3e-19
gb|ESW31536.1| hypothetical protein PHAVU_002G246300g [Phaseolus... 100 3e-19
ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containi... 99 6e-19
ref|XP_002316137.1| pentatricopeptide repeat-containing family p... 99 8e-19
ref|XP_004501417.1| PREDICTED: pentatricopeptide repeat-containi... 98 1e-18
ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 98 1e-18
ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containi... 98 1e-18
ref|XP_002867196.1| pentatricopeptide repeat-containing protein ... 98 1e-18
ref|XP_006581311.1| PREDICTED: pentatricopeptide repeat-containi... 98 1e-18
ref|XP_006578098.1| PREDICTED: pentatricopeptide repeat-containi... 98 1e-18
gb|ESW33636.1| hypothetical protein PHAVU_001G086300g [Phaseolus... 98 1e-18
ref|XP_006599001.1| PREDICTED: pentatricopeptide repeat-containi... 97 2e-18
gb|EOX98248.1| Tetratricopeptide repeat-like superfamily protein... 97 2e-18
ref|XP_006285430.1| hypothetical protein CARUB_v10006847mg [Caps... 97 2e-18
ref|XP_003629914.1| Pentatricopeptide repeat-containing protein ... 97 2e-18
ref|XP_006650653.1| PREDICTED: pentatricopeptide repeat-containi... 97 2e-18
>gb|EOY27823.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 717
Score = 100 bits (250), Expect = 2e-19
Identities = 47/71 (66%), Positives = 57/71 (80%)
Frame = +1
Query: 58 YHSEELAIAFGLMSTPTSISCISVLQNHLMSGPCHSAIKLISSVVDRQIVVRDSWRFHHF 237
YHSE LAIAFGL++T S I+V++N + G CHSAIKLI+ +V R+IVVRDS RFHHF
Sbjct: 648 YHSERLAIAFGLVTTAGG-SAITVMKNLRVCGDCHSAIKLIAKIVGREIVVRDSTRFHHF 706
Query: 238 KEGVCSCGDYW 270
K G+CSCGDYW
Sbjct: 707 KNGICSCGDYW 717
>ref|XP_004504222.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cicer arietinum]
Length = 708
Score = 100 bits (248), Expect = 3e-19
Identities = 46/71 (64%), Positives = 57/71 (80%)
Frame = +1
Query: 58 YHSEELAIAFGLMSTPTSISCISVLQNHLMSGPCHSAIKLISSVVDRQIVVRDSWRFHHF 237
YHSE LAIAFGL+ST S I+V++N + G CH+ IKL++ +VDR+IVVRDS RFHHF
Sbjct: 639 YHSERLAIAFGLLSTVEG-SRITVMKNLRVCGDCHNVIKLLAKIVDREIVVRDSSRFHHF 697
Query: 238 KEGVCSCGDYW 270
K G+CSCGDYW
Sbjct: 698 KNGICSCGDYW 708
>ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 100 bits (248), Expect = 3e-19
Identities = 45/72 (62%), Positives = 60/72 (83%)
Frame = +1
Query: 55 FYHSEELAIAFGLMSTPTSISCISVLQNHLMSGPCHSAIKLISSVVDRQIVVRDSWRFHH 234
+YHSE+LAIA+GL+STP S + I V++N + G CH+AIK IS V +R+IV+RD+ RFHH
Sbjct: 1510 YYHSEKLAIAYGLISTPASTT-IRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHH 1568
Query: 235 FKEGVCSCGDYW 270
F++GVCSCGDYW
Sbjct: 1569 FRDGVCSCGDYW 1580
>emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 100 bits (248), Expect = 3e-19
Identities = 45/72 (62%), Positives = 60/72 (83%)
Frame = +1
Query: 55 FYHSEELAIAFGLMSTPTSISCISVLQNHLMSGPCHSAIKLISSVVDRQIVVRDSWRFHH 234
+YHSE+LAIA+GL+STP S + I V++N + G CH+AIK IS V +R+IV+RD+ RFHH
Sbjct: 795 YYHSEKLAIAYGLISTPASTT-IRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHH 853
Query: 235 FKEGVCSCGDYW 270
F++GVCSCGDYW
Sbjct: 854 FRDGVCSCGDYW 865
>emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 100 bits (248), Expect = 3e-19
Identities = 45/72 (62%), Positives = 60/72 (83%)
Frame = +1
Query: 55 FYHSEELAIAFGLMSTPTSISCISVLQNHLMSGPCHSAIKLISSVVDRQIVVRDSWRFHH 234
+YHSE+LAIA+GL+STP S + I V++N + G CH+AIK IS V +R+IV+RD+ RFHH
Sbjct: 433 YYHSEKLAIAYGLISTPASTT-IRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHH 491
Query: 235 FKEGVCSCGDYW 270
F++GVCSCGDYW
Sbjct: 492 FRDGVCSCGDYW 503
>gb|ESW31536.1| hypothetical protein PHAVU_002G246300g [Phaseolus vulgaris]
Length = 708
Score = 99.8 bits (247), Expect = 3e-19
Identities = 46/71 (64%), Positives = 58/71 (81%)
Frame = +1
Query: 58 YHSEELAIAFGLMSTPTSISCISVLQNHLMSGPCHSAIKLISSVVDRQIVVRDSWRFHHF 237
YHSE LAIAFGL+ST S I+V++N + G CH+AIKL++++V R+IVVRDS RFHHF
Sbjct: 639 YHSERLAIAFGLLSTVEG-STITVMKNLRVCGDCHTAIKLMANIVHREIVVRDSSRFHHF 697
Query: 238 KEGVCSCGDYW 270
K G+CSCGDYW
Sbjct: 698 KNGICSCGDYW 708
>ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Glycine max]
Length = 721
Score = 99.0 bits (245), Expect = 6e-19
Identities = 46/71 (64%), Positives = 57/71 (80%)
Frame = +1
Query: 58 YHSEELAIAFGLMSTPTSISCISVLQNHLMSGPCHSAIKLISSVVDRQIVVRDSWRFHHF 237
YHSE LAIAFGL+ST S I+V++N + G CH+AIKL++ +VDR+IVVRDS RFH F
Sbjct: 652 YHSERLAIAFGLLSTVEG-SAITVMKNLRVCGDCHNAIKLMAKIVDREIVVRDSSRFHDF 710
Query: 238 KEGVCSCGDYW 270
K G+CSCGDYW
Sbjct: 711 KNGICSCGDYW 721
>ref|XP_002316137.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222865177|gb|EEF02308.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 601
Score = 98.6 bits (244), Expect = 8e-19
Identities = 44/71 (61%), Positives = 58/71 (81%)
Frame = +1
Query: 58 YHSEELAIAFGLMSTPTSISCISVLQNHLMSGPCHSAIKLISSVVDRQIVVRDSWRFHHF 237
YHSE+LAI+FGL++TP + I V++N + G CHSA KLISS++DR+I++RD RFHHF
Sbjct: 532 YHSEKLAISFGLLNTPPGTT-IRVVKNLRVCGDCHSAAKLISSLIDREIILRDVQRFHHF 590
Query: 238 KEGVCSCGDYW 270
K+G CSCGDYW
Sbjct: 591 KDGKCSCGDYW 601
>ref|XP_004501417.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
isoform X1 [Cicer arietinum]
gi|502132556|ref|XP_004501418.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33170-like isoform X2 [Cicer arietinum]
Length = 992
Score = 98.2 bits (243), Expect = 1e-18
Identities = 44/72 (61%), Positives = 57/72 (79%)
Frame = +1
Query: 55 FYHSEELAIAFGLMSTPTSISCISVLQNHLMSGPCHSAIKLISSVVDRQIVVRDSWRFHH 234
+YHSE+LAIA+GLM TP S + + V++N + G CH+AIK IS V R+IV+RD+ RFHH
Sbjct: 922 YYHSEKLAIAYGLMKTPPSTT-LRVIKNLRVCGDCHNAIKYISKVFQREIVLRDANRFHH 980
Query: 235 FKEGVCSCGDYW 270
FK G+CSCGDYW
Sbjct: 981 FKSGICSCGDYW 992
>ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 98.2 bits (243), Expect = 1e-18
Identities = 45/72 (62%), Positives = 57/72 (79%)
Frame = +1
Query: 55 FYHSEELAIAFGLMSTPTSISCISVLQNHLMSGPCHSAIKLISSVVDRQIVVRDSWRFHH 234
+YHSE+LAIAFGL+STP S + I V++N + G CHSAIK IS + R+IV+RD+ RFHH
Sbjct: 1503 YYHSEKLAIAFGLISTPPSAT-IRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHH 1561
Query: 235 FKEGVCSCGDYW 270
F+ G CSCGDYW
Sbjct: 1562 FRNGTCSCGDYW 1573
>ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 98.2 bits (243), Expect = 1e-18
Identities = 45/72 (62%), Positives = 57/72 (79%)
Frame = +1
Query: 55 FYHSEELAIAFGLMSTPTSISCISVLQNHLMSGPCHSAIKLISSVVDRQIVVRDSWRFHH 234
+YHSE+LAIAFGL+STP S + I V++N + G CHSAIK IS + R+IV+RD+ RFHH
Sbjct: 1503 YYHSEKLAIAFGLISTPPSAT-IRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHH 1561
Query: 235 FKEGVCSCGDYW 270
F+ G CSCGDYW
Sbjct: 1562 FRNGTCSCGDYW 1573
>ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297313032|gb|EFH43455.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 997
Score = 98.2 bits (243), Expect = 1e-18
Identities = 44/72 (61%), Positives = 58/72 (80%)
Frame = +1
Query: 55 FYHSEELAIAFGLMSTPTSISCISVLQNHLMSGPCHSAIKLISSVVDRQIVVRDSWRFHH 234
+YHSE+LA+AFGL+STP S I V++N + G CH+A+K IS V DR+IV+RD+ RFH
Sbjct: 927 YYHSEKLAVAFGLLSTPPSTP-IRVIKNLRVCGDCHNAMKYISKVYDREIVLRDANRFHR 985
Query: 235 FKEGVCSCGDYW 270
FK+G+CSCGDYW
Sbjct: 986 FKDGICSCGDYW 997
>ref|XP_006581311.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 981
Score = 97.8 bits (242), Expect = 1e-18
Identities = 43/72 (59%), Positives = 58/72 (80%)
Frame = +1
Query: 55 FYHSEELAIAFGLMSTPTSISCISVLQNHLMSGPCHSAIKLISSVVDRQIVVRDSWRFHH 234
+YHSE+LAIA+GLM TP S + + V++N + G CH+AIK IS V +R++V+RD+ RFHH
Sbjct: 911 YYHSEKLAIAYGLMKTPPSTT-LRVIKNLRVCGDCHNAIKYISKVFEREVVLRDANRFHH 969
Query: 235 FKEGVCSCGDYW 270
F+ GVCSCGDYW
Sbjct: 970 FRSGVCSCGDYW 981
>ref|XP_006578098.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 980
Score = 97.8 bits (242), Expect = 1e-18
Identities = 44/72 (61%), Positives = 57/72 (79%)
Frame = +1
Query: 55 FYHSEELAIAFGLMSTPTSISCISVLQNHLMSGPCHSAIKLISSVVDRQIVVRDSWRFHH 234
+YHSE+LAIA+GLM TP S + + V++N + G CHSAIK IS V R+IV+RD+ RFHH
Sbjct: 910 YYHSEKLAIAYGLMKTPPSTT-LRVIKNLRVCGDCHSAIKYISKVFKREIVLRDANRFHH 968
Query: 235 FKEGVCSCGDYW 270
F+ G+CSCGDYW
Sbjct: 969 FRNGICSCGDYW 980
>gb|ESW33636.1| hypothetical protein PHAVU_001G086300g [Phaseolus vulgaris]
Length = 669
Score = 97.8 bits (242), Expect = 1e-18
Identities = 52/91 (57%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
Frame = +1
Query: 1 YLTSCRGMLSYEHDGGGPFYHSEELAIAFGLM-STPTSISCISVLQNHLMSGPCHSAIKL 177
YLTS + E G HSE+LA+ FG+M S P SI I +++N + G CH AIKL
Sbjct: 581 YLTSVLHDVDEEEKGMVLRVHSEKLAVCFGIMNSVPGSI--IHIIKNLRICGDCHIAIKL 638
Query: 178 ISSVVDRQIVVRDSWRFHHFKEGVCSCGDYW 270
IS VV+R+IVVRDS RFHHFK+G+CSCGDYW
Sbjct: 639 ISKVVNREIVVRDSKRFHHFKDGMCSCGDYW 669
>ref|XP_006599001.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Glycine max]
Length = 653
Score = 97.4 bits (241), Expect = 2e-18
Identities = 47/71 (66%), Positives = 58/71 (81%), Gaps = 1/71 (1%)
Frame = +1
Query: 61 HSEELAIAFGLM-STPTSISCISVLQNHLMSGPCHSAIKLISSVVDRQIVVRDSWRFHHF 237
HSE+LA+AFG+M S P SI I +++N + G CHSAIKLIS V+R+IVVRDS RFHHF
Sbjct: 585 HSEKLAVAFGIMNSVPGSI--IQIIKNLRICGDCHSAIKLISKAVNREIVVRDSKRFHHF 642
Query: 238 KEGVCSCGDYW 270
K+G+CSCGDYW
Sbjct: 643 KDGLCSCGDYW 653
>gb|EOX98248.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao]
Length = 613
Score = 97.4 bits (241), Expect = 2e-18
Identities = 41/71 (57%), Positives = 57/71 (80%)
Frame = +1
Query: 58 YHSEELAIAFGLMSTPTSISCISVLQNHLMSGPCHSAIKLISSVVDRQIVVRDSWRFHHF 237
YHSE LAIAFGL+STP + +++N + G CH+AIK+IS +V R++++RD+ RFHHF
Sbjct: 544 YHSERLAIAFGLISTPAR-QTLRIIKNLRVCGDCHNAIKIISRIVGRELIIRDNKRFHHF 602
Query: 238 KEGVCSCGDYW 270
K+G+CSCGDYW
Sbjct: 603 KDGLCSCGDYW 613
>ref|XP_006285430.1| hypothetical protein CARUB_v10006847mg [Capsella rubella]
gi|482554135|gb|EOA18328.1| hypothetical protein
CARUB_v10006847mg [Capsella rubella]
Length = 996
Score = 97.4 bits (241), Expect = 2e-18
Identities = 44/72 (61%), Positives = 57/72 (79%)
Frame = +1
Query: 55 FYHSEELAIAFGLMSTPTSISCISVLQNHLMSGPCHSAIKLISSVVDRQIVVRDSWRFHH 234
+YHSE+LA+AFGLMSTP S I V++N + G CH+A+K I+ V DR+IV+RD+ RFH
Sbjct: 926 YYHSEKLAVAFGLMSTPPSTP-IRVIKNLRICGDCHNAMKYIAKVYDREIVLRDANRFHR 984
Query: 235 FKEGVCSCGDYW 270
FK G+CSCGDYW
Sbjct: 985 FKNGICSCGDYW 996
>ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523936|gb|AET04390.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 727
Score = 97.4 bits (241), Expect = 2e-18
Identities = 44/71 (61%), Positives = 57/71 (80%)
Frame = +1
Query: 58 YHSEELAIAFGLMSTPTSISCISVLQNHLMSGPCHSAIKLISSVVDRQIVVRDSWRFHHF 237
YHSE LAIAFGL+ST S I++++N + G CH+AI L++ +V+R+IVVRDS RFHHF
Sbjct: 658 YHSERLAIAFGLLSTVEG-STITIMKNLRVCGDCHTAITLMAKIVNREIVVRDSSRFHHF 716
Query: 238 KEGVCSCGDYW 270
K G+CSCGDYW
Sbjct: 717 KNGICSCGDYW 727
>ref|XP_006650653.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Oryza brachyantha]
Length = 297
Score = 97.1 bits (240), Expect = 2e-18
Identities = 44/71 (61%), Positives = 55/71 (77%)
Frame = +1
Query: 58 YHSEELAIAFGLMSTPTSISCISVLQNHLMSGPCHSAIKLISSVVDRQIVVRDSWRFHHF 237
YHSE LAIAFGL+STP + V++N + G CH+A+KLI+ V R+IVVRD+ RFHHF
Sbjct: 228 YHSERLAIAFGLVSTPPGTP-LRVIKNLRICGDCHNAVKLIAKVTGREIVVRDNKRFHHF 286
Query: 238 KEGVCSCGDYW 270
K+G CSCGDYW
Sbjct: 287 KDGACSCGDYW 297