BLASTX nr result
ID: Ephedra25_contig00021914
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00021914
(1147 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006306613.1| hypothetical protein CARUB_v10008128mg [Caps... 137 8e-30
ref|XP_002301895.1| DEAD/DEAH box helicase family protein [Popul... 136 2e-29
ref|XP_006659857.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 134 5e-29
ref|NP_173516.1| DEAD Box RNA Helicase RCF1 [Arabidopsis thalian... 134 7e-29
ref|XP_003517532.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 134 7e-29
ref|XP_006349887.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 133 2e-28
ref|XP_004252969.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 133 2e-28
ref|XP_002307002.2| hypothetical protein POPTR_0005s27880g [Popu... 132 2e-28
ref|XP_004485495.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 132 2e-28
ref|XP_003593029.1| DEAD box ATP-dependent RNA helicase [Medicag... 132 2e-28
ref|XP_006659123.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 132 3e-28
ref|XP_002530253.1| dead box ATP-dependent RNA helicase, putativ... 132 3e-28
gb|ESW29025.1| hypothetical protein PHAVU_002G037900g [Phaseolus... 132 3e-28
ref|XP_006416348.1| hypothetical protein EUTSA_v10006608mg [Eutr... 131 4e-28
ref|XP_006590453.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 129 2e-27
ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helica... 128 5e-27
ref|XP_004972780.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 127 6e-27
gb|EXB56258.1| DEAD-box ATP-dependent RNA helicase 42 [Morus not... 127 8e-27
gb|AFW57263.1| putative DEAD-box ATP-dependent RNA helicase fami... 127 8e-27
ref|NP_187573.1| DEAD-box ATP-dependent RNA helicase 45 [Arabido... 126 1e-26
>ref|XP_006306613.1| hypothetical protein CARUB_v10008128mg [Capsella rubella]
gi|565497950|ref|XP_006306614.1| hypothetical protein
CARUB_v10008128mg [Capsella rubella]
gi|565497952|ref|XP_006306615.1| hypothetical protein
CARUB_v10008128mg [Capsella rubella]
gi|482575324|gb|EOA39511.1| hypothetical protein
CARUB_v10008128mg [Capsella rubella]
gi|482575325|gb|EOA39512.1| hypothetical protein
CARUB_v10008128mg [Capsella rubella]
gi|482575326|gb|EOA39513.1| hypothetical protein
CARUB_v10008128mg [Capsella rubella]
Length = 1171
Score = 137 bits (345), Expect = 8e-30
Identities = 91/244 (37%), Positives = 120/244 (49%), Gaps = 32/244 (13%)
Frame = -2
Query: 636 RRKSEDSDEEAREKR-KKDDMEAEQKRLDEEMEKRRRRVQEWQEMRRK--------KNDN 484
+RKS + D E +EK+ +++++E EQK+LDEE+EKRRRRVQEWQE++RK K D
Sbjct: 255 KRKSVEEDGEKKEKKTREEELEDEQKKLDEEVEKRRRRVQEWQELKRKQEEAENEIKGDG 314
Query: 483 GGNEAKEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMDVDK----- 319
G E K GK WTL ++ +
Sbjct: 315 DGKEPKAGKAWTLDGESDDEEGHQEEKSETEMDVDGESKPESGGDAKIVDLENETATTVP 374
Query: 318 ----NGTADDDEIDPLDAFMNSLVVPEATPQEN----------MTXXXXXXXXXXNMPKS 181
+G AD+DEIDPLDAFMN++V+PE N + + PK
Sbjct: 375 ESGGDGAADEDEIDPLDAFMNTMVLPEVEKLSNSAPSPAVNDGILDSKMNGKDSGDQPKK 434
Query: 180 ----KVGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIVDHSKVQYI 13
+GRI QGEDSD + EFMKRVKK+K EKLS+VDHSK++Y
Sbjct: 435 GFNKALGRIIQGEDSDSDYSEPKDDDDPSLEEDDEEFMKRVKKTKAEKLSLVDHSKIEYE 494
Query: 12 PFRK 1
PFRK
Sbjct: 495 PFRK 498
>ref|XP_002301895.1| DEAD/DEAH box helicase family protein [Populus trichocarpa]
gi|222843621|gb|EEE81168.1| DEAD/DEAH box helicase
family protein [Populus trichocarpa]
Length = 1112
Score = 136 bits (342), Expect = 2e-29
Identities = 95/249 (38%), Positives = 120/249 (48%), Gaps = 37/249 (14%)
Frame = -2
Query: 636 RRKSEDSDEEAREK----RKKDD------MEAEQKRLDEEMEKRRRRVQEWQEMRRKKND 487
R S DSD++++++ R++DD +E EQK+LDEEMEKRRRRVQEWQE+RRKK +
Sbjct: 205 RELSSDSDDDSKDRDKKRRRRDDDDYKERLEQEQKKLDEEMEKRRRRVQEWQELRRKKEE 264
Query: 486 NGG---------NEAKEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAP 334
NE K GKTWTL
Sbjct: 265 TEREKHGEEADVNEPKTGKTWTLEGESDDEEAPPTGKSETD------------------- 305
Query: 333 MDVDKNGTADDDEIDPLDAFMNSLVVPEA----------TPQENMTXXXXXXXXXXNM-- 190
MD+++N D++EIDPLDAFMNS+V+PE T +N T +
Sbjct: 306 MDLEENAKPDEEEIDPLDAFMNSMVLPEVEKLNSTLVTHTADDNKTDLKNKDKKEERING 365
Query: 189 ------PKSKVGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIVDHS 28
+GRI GEDSD + EFMKRVKK+K EKLSIVDHS
Sbjct: 366 EQRKKGSHKSLGRIVPGEDSDSDYGDLENGEDPLEEEDDDEFMKRVKKTKAEKLSIVDHS 425
Query: 27 KVQYIPFRK 1
K+ Y PFRK
Sbjct: 426 KIDYNPFRK 434
>ref|XP_006659857.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Oryza
brachyantha]
Length = 1022
Score = 134 bits (338), Expect = 5e-29
Identities = 93/252 (36%), Positives = 121/252 (48%), Gaps = 39/252 (15%)
Frame = -2
Query: 639 SRRKSEDSDEEAREKRKKDDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKNDNGGNEAKE- 463
+R + E+ DEE E+R++ E EQ++LDEEME RRRR++EWQEM+R++ + E +E
Sbjct: 118 AREEEEEVDEEEAERRRQKKKEEEQQQLDEEMETRRRRIKEWQEMKRREEETKRREQQES 177
Query: 462 -----------------GKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAP 334
GK WTL
Sbjct: 178 GVGTSAAATGADDGGNAGKKWTLDGEESDEEGDKEDAKKSDDNGGSGAGI---------- 227
Query: 333 MDVD-KNGTA---------DDDEIDPLDAFMNSLVVPEATPQENMTXXXXXXXXXXNM-- 190
MDVD +NG + +DDEIDPLDAFMNS+V+PE E+M ++
Sbjct: 228 MDVDTQNGDSNANGATAMDEDDEIDPLDAFMNSMVLPEVAKLESMPTANVDDKNDKSVKD 287
Query: 189 ---------PKSKVGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIV 37
PK +GRI QGEDSD + D EFMKRVKK+KVEKL+IV
Sbjct: 288 AVTDGDKKGPKKVMGRIIQGEDSDSDYDDDVDDEDGSEDEDDEEFMKRVKKTKVEKLAIV 347
Query: 36 DHSKVQYIPFRK 1
DHSK+ Y PFRK
Sbjct: 348 DHSKIDYQPFRK 359
>ref|NP_173516.1| DEAD Box RNA Helicase RCF1 [Arabidopsis thaliana]
gi|108861895|sp|Q8H0U8.2|RH42_ARATH RecName:
Full=DEAD-box ATP-dependent RNA helicase 42; AltName:
Full=DEAD-box RNA helicase RCF1; AltName: Full=REGULATOR
OF CBF GENE EXPRESSION 1
gi|4836896|gb|AAD30599.1|AC007369_9 Similar to RNA
helicases [Arabidopsis thaliana]
gi|332191919|gb|AEE30040.1| DEAD Box RNA Helicase RCF1
[Arabidopsis thaliana]
Length = 1166
Score = 134 bits (337), Expect = 7e-29
Identities = 88/244 (36%), Positives = 117/244 (47%), Gaps = 32/244 (13%)
Frame = -2
Query: 636 RRKSEDSDEEAREKRKKDDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKN--------DNG 481
R+ ED+ E+ +K +++++E EQK+LDEE+EKRRRRVQEWQE++RKK D
Sbjct: 249 RKSVEDNGEKKEKKTREEELEDEQKKLDEEVEKRRRRVQEWQELKRKKEEAESESKGDAD 308
Query: 480 GNEAKEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMDVDK------ 319
GNE K GK WTL ++ +
Sbjct: 309 GNEPKAGKAWTLEGESDDEEGHPEEKSETEMDVDEETKPENDGDAKMVDLENETAATVSE 368
Query: 318 ---NGTADDDEIDPLDAFMNSLVVPEA---------------TPQENMTXXXXXXXXXXN 193
+G D++EIDPLDAFMN++V+PE T M
Sbjct: 369 SGGDGAVDEEEIDPLDAFMNTMVLPEVEKFCNGAPPPAVNDGTLDSKMNGKESGDRPKKG 428
Query: 192 MPKSKVGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIVDHSKVQYI 13
K+ +GRI QGEDSD + EFMKRVKK+K EKLS+VDHSK++Y
Sbjct: 429 FNKA-LGRIIQGEDSDSDYSEPKNDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSKIEYE 487
Query: 12 PFRK 1
PFRK
Sbjct: 488 PFRK 491
>ref|XP_003517532.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform X1
[Glycine max]
Length = 1104
Score = 134 bits (337), Expect = 7e-29
Identities = 97/254 (38%), Positives = 120/254 (47%), Gaps = 42/254 (16%)
Frame = -2
Query: 636 RRKSEDSDEEAREKRKK----DDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKNDN----- 484
R+KS + D + +++ KK ++ME EQKRLDEEMEKRRRRVQEWQE+RRKK +
Sbjct: 197 RKKSGEDDSDTKDEEKKPTREEEMEDEQKRLDEEMEKRRRRVQEWQELRRKKEEAEREKQ 256
Query: 483 ---GGNEAKEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMDVD--- 322
NE + GKTWTL +D D
Sbjct: 257 GEASANEPESGKTWTLEGESDDEEGLGTGKQTGMDVDEDDKPADEEPKDVMV-VDTDNGT 315
Query: 321 -----KNGTA---DDDEIDPLDAFMNSLVVPEATPQENMTXXXXXXXXXXNMPKSK---- 178
++GTA +D+EIDPLDAFMNS+V+PE N PK K
Sbjct: 316 IASDLQDGTAGAPEDEEIDPLDAFMNSMVLPEVEKLNNAVTSSLSDKAIDVKPKDKGNGQ 375
Query: 177 -------------VGRIRQGE--DSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLS 43
+GRI GE DSDY D EFMKRVKK+K EKLS
Sbjct: 376 NRGAQSRKGSNKSIGRIIPGEESDSDYADD---EVEKDPLDEDDDEFMKRVKKTKAEKLS 432
Query: 42 IVDHSKVQYIPFRK 1
+VDHSK+ Y PF+K
Sbjct: 433 LVDHSKIDYEPFKK 446
>ref|XP_006349887.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Solanum
tuberosum]
Length = 1115
Score = 133 bits (334), Expect = 2e-28
Identities = 92/249 (36%), Positives = 116/249 (46%), Gaps = 35/249 (14%)
Frame = -2
Query: 642 NSRRKSEDSDEEAREKRKK---DDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKN------ 490
N+R + E +DE + EK +K +D+ EQ++LD+EMEKRRRRVQEWQE++RKK
Sbjct: 183 NNRLREESTDEVSAEKDQKSREEDLAEEQRKLDDEMEKRRRRVQEWQELKRKKEESERET 242
Query: 489 ---DNGGNEAKEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMDVDK 319
D G E K GKTWTL +
Sbjct: 243 LGVDAGAEEPKLGKTWTLDGESDDEDAEGKTGMDIDMDDSGKVMDDEIGADKVVSSSIGS 302
Query: 318 N---------GTADDDEIDPLDAFMNSLVVPE----------ATPQENMTXXXXXXXXXX 196
+ G DDDEIDPLDAFMN +V+PE + EN +
Sbjct: 303 DSPVIQNGGDGLVDDDEIDPLDAFMNDMVLPEVEKLNKSVVNSLDGENSSLKEKNGLRKE 362
Query: 195 NMPKSKV----GRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIVDHS 28
PK + GRI GEDSD + EFMKRVKK+K EKLS+VDHS
Sbjct: 363 EKPKMSMKKTMGRIIPGEDSDSDYGNVENDEDPLEEEDDEEFMKRVKKTKAEKLSLVDHS 422
Query: 27 KVQYIPFRK 1
K++Y PFRK
Sbjct: 423 KIEYPPFRK 431
>ref|XP_004252969.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform 1
[Solanum lycopersicum] gi|460415245|ref|XP_004252970.1|
PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like
isoform 2 [Solanum lycopersicum]
Length = 1147
Score = 133 bits (334), Expect = 2e-28
Identities = 92/249 (36%), Positives = 116/249 (46%), Gaps = 35/249 (14%)
Frame = -2
Query: 642 NSRRKSEDSDEEAREKRKK---DDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKN------ 490
N+R + E +DE + EK +K +D+ EQ++LD+EMEKRRRRVQEWQE++RKK
Sbjct: 215 NNRLREESTDEVSAEKDQKSREEDLAEEQRKLDDEMEKRRRRVQEWQELKRKKEESERET 274
Query: 489 ---DNGGNEAKEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMDVDK 319
D G E K GKTWTL +
Sbjct: 275 LGVDAGAEEPKLGKTWTLDGESDDEDAEGKTGMDIDRDDTGKVMDDENGAGKVVSSSIGS 334
Query: 318 N---------GTADDDEIDPLDAFMNSLVVPE----------ATPQENMTXXXXXXXXXX 196
+ G DDDEIDPLDAFMN +V+PE + EN +
Sbjct: 335 DSPVIQNGGDGLVDDDEIDPLDAFMNDMVLPEVEKLNKSVVNSLDGENSSMKEKNGPRKE 394
Query: 195 NMPKSKV----GRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIVDHS 28
PK + GRI GEDSD + EFMKRVKK+K EKLS+VDHS
Sbjct: 395 EKPKMSMKKTMGRIIPGEDSDSDYGNVENDEDPLEEEDDEEFMKRVKKTKAEKLSLVDHS 454
Query: 27 KVQYIPFRK 1
K++Y PFRK
Sbjct: 455 KIEYPPFRK 463
>ref|XP_002307002.2| hypothetical protein POPTR_0005s27880g [Populus trichocarpa]
gi|550339899|gb|EEE93998.2| hypothetical protein
POPTR_0005s27880g [Populus trichocarpa]
Length = 1073
Score = 132 bits (333), Expect = 2e-28
Identities = 93/250 (37%), Positives = 118/250 (47%), Gaps = 36/250 (14%)
Frame = -2
Query: 642 NSRRKSEDSDEEAREKRKKDDMEAEQKRLDEEMEKRRRRVQEWQEMRRKK----NDNGGN 475
+ +R+ E + RE+R++D++E EQK+LDEEMEKRRRRVQEWQE+RRKK ++ GG
Sbjct: 147 SGKREREREKDRERERREQDELEEEQKKLDEEMEKRRRRVQEWQELRRKKEETESEKGGE 206
Query: 474 EA-----KEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMDVDKNGT 310
EA K GKTWTL +D + + +
Sbjct: 207 EANVDESKSGKTWTLEGESDDEEAPPTGKSDMDIDQEENAIPDKEAGDAMV-VDTENDIS 265
Query: 309 A---------DDDEIDPLDAFMNSLVVPEATPQENMTXXXXXXXXXXNMPK--------- 184
A D+EIDPLDAFMNS+V+PE N + K
Sbjct: 266 APQSEVDAVNGDEEIDPLDAFMNSMVLPEVEMLNNAVVTQTADDNKADSKKKDKNDEGIN 325
Query: 183 ---------SKVGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIVDH 31
+GRI GEDSD + EFMKRVKK+K EKLSIVDH
Sbjct: 326 GGQRKKGSHKSLGRIIPGEDSDSDHGDLENSEVPLEDEDDDEFMKRVKKTKAEKLSIVDH 385
Query: 30 SKVQYIPFRK 1
SK+ Y PFRK
Sbjct: 386 SKIDYSPFRK 395
>ref|XP_004485495.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform X1
[Cicer arietinum]
Length = 1140
Score = 132 bits (333), Expect = 2e-28
Identities = 98/254 (38%), Positives = 115/254 (45%), Gaps = 42/254 (16%)
Frame = -2
Query: 636 RRKSEDSDEEAREKRKK----DDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKND-----N 484
RRKS+ D + ++K K ++ME EQ+RLDEEMEKRRRRVQEWQE+RRKK +
Sbjct: 214 RRKSDIDDSDNKDKEDKPSREEEMEDEQRRLDEEMEKRRRRVQEWQELRRKKEEAEREKQ 273
Query: 483 GGNEAKE----GKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMDVDKN 316
G A E GK WTL MDVD
Sbjct: 274 GEASATEPESGGKAWTLDGEESDDEEGTGKHTTMDVDEDDKLADKEPGDSMA--MDVDNG 331
Query: 315 -----------GTADDDEIDPLDAFMNSLVVPEATPQENMTXXXXXXXXXXNMPKSK--- 178
G +DDEIDPLDAFMNS+V+PE N PK K
Sbjct: 332 TVASDLQNGDAGAMEDDEIDPLDAFMNSMVLPEVEKLNNAVSSTPLDKASDLKPKDKGDE 391
Query: 177 ---------------VGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLS 43
+GRI GE+SD + EFMKRVKK+K EKLS
Sbjct: 392 RSNGGGQSKKGSNKSIGRIIPGEESDSDY-ADPEVEGDPLDEDDDEFMKRVKKTKAEKLS 450
Query: 42 IVDHSKVQYIPFRK 1
IVDHSK+ YIPFRK
Sbjct: 451 IVDHSKIDYIPFRK 464
>ref|XP_003593029.1| DEAD box ATP-dependent RNA helicase [Medicago truncatula]
gi|355482077|gb|AES63280.1| DEAD box ATP-dependent RNA
helicase [Medicago truncatula]
Length = 1148
Score = 132 bits (333), Expect = 2e-28
Identities = 96/252 (38%), Positives = 116/252 (46%), Gaps = 40/252 (15%)
Frame = -2
Query: 636 RRKSEDSDEEAREKRKK----DDMEAEQKRLDEEMEKRRRRVQEWQEMRR--------KK 493
RRKS+ D +++EK KK ++ME EQKRLD+EMEKRRR+VQ WQE+RR K+
Sbjct: 247 RRKSDGDDSDSKEKAKKQTREEEMEEEQKRLDDEMEKRRRKVQAWQELRRLEEEAQRKKQ 306
Query: 492 NDNGGNEAKEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMDVDKNG 313
+ EA+ GK WTL +DVDK
Sbjct: 307 GEASVVEAESGKKWTLDGEESDDEDGTGKHTSMDIDEDDKPADNEPTDSMA--VDVDKGT 364
Query: 312 TADD-----------DEIDPLDAFMNSLVVPEATPQENMTXXXXXXXXXXNMPKSK---- 178
A D DEIDPLDAFMNS+V+PE N PK K
Sbjct: 365 VASDLQNGDAGAPAEDEIDPLDAFMNSMVLPEVEKLNNAVNSAPPDKASDLNPKDKGAES 424
Query: 177 -------------VGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIV 37
+GRI GE+SD + EFMKRVKK+K EKLSIV
Sbjct: 425 RNGGQSRKGSNKSIGRIIPGEESDSDY-ADPEVEGDPLDEDDDEFMKRVKKTKAEKLSIV 483
Query: 36 DHSKVQYIPFRK 1
DHSK+ YIPFRK
Sbjct: 484 DHSKIDYIPFRK 495
>ref|XP_006659123.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Oryza
brachyantha]
Length = 1068
Score = 132 bits (332), Expect = 3e-28
Identities = 94/257 (36%), Positives = 116/257 (45%), Gaps = 44/257 (17%)
Frame = -2
Query: 639 SRRKSEDSDEEAREKRKKDDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKND--------- 487
+R E+ DEE E+R++ E EQKRLDEEME RRRRV+EWQEM+R + +
Sbjct: 157 AREVEEEVDEEEAERRRQKRKEEEQKRLDEEMELRRRRVKEWQEMKRLQEEAKRLEQEEE 216
Query: 486 ------------------NGGNEAKEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXX 361
NG +A GK WTL
Sbjct: 217 ARAGDGASTAAATTTAEANGDGDANAGKKWTLDGEESDEEGSKEDAEKTQDSGGVTTDLP 276
Query: 360 XXXXXXXAPMDVDKNGTA--DDDEIDPLDAFMNSLVVPE------------ATPQENM-- 229
D NG A ++D+IDPLDAFMNS+V+PE +TP NM
Sbjct: 277 NVVN--------DANGAAAMEEDDIDPLDAFMNSMVLPEVAKLETVVASMGSTPAANMDD 328
Query: 228 -TXXXXXXXXXXNMPKSKVGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVE 52
+PK +GRI QG+DSD + D EFMKRVKK+KVE
Sbjct: 329 KNGKSTVSNGDKKVPKKAMGRIMQGDDSDSDYDDDEDDEGGSEDEDDEEFMKRVKKTKVE 388
Query: 51 KLSIVDHSKVQYIPFRK 1
KL IVDHSK+ Y PFRK
Sbjct: 389 KLVIVDHSKIDYQPFRK 405
>ref|XP_002530253.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223530219|gb|EEF32123.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 1173
Score = 132 bits (332), Expect = 3e-28
Identities = 92/248 (37%), Positives = 117/248 (47%), Gaps = 36/248 (14%)
Frame = -2
Query: 636 RRKSEDSDEEAREKRKKDDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKNDN--------- 484
++ ED ++ +K +++++E EQKRLDEEMEKRRRRVQEWQE+RRKK ++
Sbjct: 245 KKSGEDELDKKEKKTREEELEDEQKRLDEEMEKRRRRVQEWQELRRKKEESEREKHGEAS 304
Query: 483 GGNEAKEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMDVDK-NGTA 307
+E + GKTWTL M VD NGTA
Sbjct: 305 NADEPQTGKTWTLEGESDDEEAPLAGKSETNMDLDENAKPDEEIGDA---MVVDSYNGTA 361
Query: 306 ----------DDDEIDPLDAFMNSLVVPEATPQENMTXXXXXXXXXXNMPKSK------- 178
+D+EIDPLDAFMNS+V+PE N + K K
Sbjct: 362 TSENGDNDVIEDEEIDPLDAFMNSMVLPEVEKLNNAVITETVDENKVELKKKKEEGNEGE 421
Query: 177 ---------VGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIVDHSK 25
+GRI GEDSD + EFMKRVKK+K EKLS+VDHSK
Sbjct: 422 KLKKGSNKSLGRIIPGEDSDSDYGDLENDEGPLDDEDDDEFMKRVKKTKAEKLSVVDHSK 481
Query: 24 VQYIPFRK 1
+ Y PFRK
Sbjct: 482 IDYKPFRK 489
>gb|ESW29025.1| hypothetical protein PHAVU_002G037900g [Phaseolus vulgaris]
gi|561030447|gb|ESW29026.1| hypothetical protein
PHAVU_002G037900g [Phaseolus vulgaris]
Length = 1129
Score = 132 bits (331), Expect = 3e-28
Identities = 93/254 (36%), Positives = 114/254 (44%), Gaps = 42/254 (16%)
Frame = -2
Query: 636 RRKSEDSDEEAREKR----KKDDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKNDN----- 484
R+KS D + ++ ++++ME EQKRLDEE+EKRRRRVQEWQE+RRKK +
Sbjct: 203 RKKSVGDDSDTKDGEIKPTREEEMENEQKRLDEEIEKRRRRVQEWQELRRKKEEAEREKH 262
Query: 483 ---GGNEAKEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMDVDKN- 316
NE + GKTWTL +D D
Sbjct: 263 GEVSANEPESGKTWTLEGESDDEEGPGTEKQDTGMDVDEDDKPADMEPKDVMEVDTDNGT 322
Query: 315 ----------GTADDDEIDPLDAFMNSLVVPEATPQENMTXXXXXXXXXXNMPKSK---- 178
GT +DDEIDPLDAFMNS+V+PE N K K
Sbjct: 323 IASDLQEGTAGTPEDDEIDPLDAFMNSMVLPEVEKLNNAVTSVISDKAVDIKAKDKGNEQ 382
Query: 177 -------------VGRIRQGE--DSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLS 43
+GRI GE DSDY D EFMKRVKK+K EKLS
Sbjct: 383 SRGTQSRKGSNKSIGRIIPGEESDSDYADD---EVERDPLDEDDDEFMKRVKKTKAEKLS 439
Query: 42 IVDHSKVQYIPFRK 1
+VDHSK+ Y PF+K
Sbjct: 440 LVDHSKIDYEPFKK 453
>ref|XP_006416348.1| hypothetical protein EUTSA_v10006608mg [Eutrema salsugineum]
gi|567149382|ref|XP_006416349.1| hypothetical protein
EUTSA_v10006608mg [Eutrema salsugineum]
gi|557094119|gb|ESQ34701.1| hypothetical protein
EUTSA_v10006608mg [Eutrema salsugineum]
gi|557094120|gb|ESQ34702.1| hypothetical protein
EUTSA_v10006608mg [Eutrema salsugineum]
Length = 1166
Score = 131 bits (330), Expect = 4e-28
Identities = 90/245 (36%), Positives = 117/245 (47%), Gaps = 33/245 (13%)
Frame = -2
Query: 636 RRKSEDSDEEAREKR-KKDDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKN--------DN 484
RRK+ + D E +EK+ +++++E EQK+LDEEMEKRRRRVQEWQE++RKK D
Sbjct: 251 RRKTGEEDGEKKEKKTREEELEDEQKKLDEEMEKRRRRVQEWQELKRKKEEAESESKGDA 310
Query: 483 GGNEAKEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMDVDK----- 319
E K GK WTL +DV+
Sbjct: 311 DDKEPKAGKAWTLEGESDDEECHPEEKTETEMDVDGETKPENGGDAKM--VDVENAMSTT 368
Query: 318 ------NGTADDDEIDPLDAFMNSLVVPEATPQENMTXXXXXXXXXXNMPKSK------- 178
+G AD++EIDPLDAFMN++V+PE N + K
Sbjct: 369 VSEKGGDGAADEEEIDPLDAFMNAMVLPEVEKLSNSAPPVVKDGILDSEKNGKERGDQPK 428
Query: 177 ------VGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIVDHSKVQY 16
+GRI QGEDSD + EFMKRVKK+K EKLS+VDHSK++Y
Sbjct: 429 KGFNKSLGRIMQGEDSDSDYSEPKDDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSKIEY 488
Query: 15 IPFRK 1
FRK
Sbjct: 489 ESFRK 493
>ref|XP_006590453.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform X1
[Glycine max]
Length = 1107
Score = 129 bits (325), Expect = 2e-27
Identities = 93/253 (36%), Positives = 114/253 (45%), Gaps = 41/253 (16%)
Frame = -2
Query: 636 RRKSEDSDEEAREKRKK----DDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKNDN----- 484
R+KS D + +++ KK ++ME EQKRLDEEMEKRRRRVQEWQE+RRK+ +
Sbjct: 200 RKKSGGDDSDTKDEEKKPTREEEMEDEQKRLDEEMEKRRRRVQEWQELRRKREEAEREKH 259
Query: 483 ---GGNEAKEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMDVDKN- 316
NE + GKTWTL V+
Sbjct: 260 GEASANEPESGKTWTLEGESDDEEGPGTGKQTGMDVDEDDKPADKEPKDVMVVDTVNGTI 319
Query: 315 ---------GTADDDEIDPLDAFMNSLVVPEATPQENMTXXXXXXXXXXNMPKSK----- 178
G +D+EIDPLDAFMNS+V+PE N PK K
Sbjct: 320 ASDLQDGPAGAPEDEEIDPLDAFMNSMVLPEVEKLNNAVTSSLSGKAIDVKPKDKGNEQN 379
Query: 177 ------------VGRIRQGE--DSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSI 40
+GRI GE DSDY D EFMKRVKK+K EKLS+
Sbjct: 380 RGAQSRKVSNKSIGRIIPGEESDSDYADD---EVEKDPLDEDDDEFMKRVKKTKAEKLSL 436
Query: 39 VDHSKVQYIPFRK 1
VDHSK+ Y PF+K
Sbjct: 437 VDHSKIVYEPFKK 449
>ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Vitis
vinifera]
Length = 1147
Score = 128 bits (321), Expect = 5e-27
Identities = 87/234 (37%), Positives = 115/234 (49%), Gaps = 22/234 (9%)
Frame = -2
Query: 636 RRKSEDSDEEAREKR-KKDDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKNDN-------- 484
R+KS+D D + +E+R +++D+E EQ++LDEEMEKRRRRVQEWQE++RK+ ++
Sbjct: 241 RKKSDDDDLDKKERRTREEDLEEEQRKLDEEMEKRRRRVQEWQELKRKREESEREKLGEA 300
Query: 483 -GGNEAKEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMDVDKNGTA 307
+E K GKTWTL +D +NGT+
Sbjct: 301 ANADEPKSGKTWTLEGESDDEDVAPTGNSETDLNMDEDAKPTDNEVGDGMAID-SQNGTS 359
Query: 306 ------------DDDEIDPLDAFMNSLVVPEATPQENMTXXXXXXXXXXNMPKSKVGRIR 163
D+EIDPLDAFMNS+V+PE N P S +
Sbjct: 360 ASTLQNGDEGADGDEEIDPLDAFMNSMVLPEVEKLNNAA----------VSPTSNA--VV 407
Query: 162 QGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIVDHSKVQYIPFRK 1
EDSD + EFMKRVKK+K E+LSIVDHSK+ Y PFRK
Sbjct: 408 PSEDSDSDYGDLENNEDPLEEEDDDEFMKRVKKTKAERLSIVDHSKIDYKPFRK 461
>ref|XP_004972780.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform X1
[Setaria italica]
Length = 1065
Score = 127 bits (320), Expect = 6e-27
Identities = 88/247 (35%), Positives = 116/247 (46%), Gaps = 37/247 (14%)
Frame = -2
Query: 630 KSEDSDEEAREKR----KKDDMEAEQKRLDEEMEKRRRRVQEWQEMRR---KKNDNGG-- 478
+ E+ DEEA E+R K++DMEAEQ+RLD+EME+RRRRV+EWQE RR ++ D GG
Sbjct: 158 REEEVDEEAAERRRQRKKEEDMEAEQQRLDDEMERRRRRVKEWQEKRREQQQQQDGGGAA 217
Query: 477 ----------NEAKEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMD 328
+ K GK WTL D
Sbjct: 218 GTSAAAAAEADVPKVGKKWTLDGEESDEEGDKEDGNKAEENGGAGDMNVDLPNGGG---D 274
Query: 327 VDKNGTADDDEIDPLDAFMNSLVVPEATPQEN------------------MTXXXXXXXX 202
+ ++DEIDPLDAFMNS+V+PE E+ +
Sbjct: 275 ANGGAAMEEDEIDPLDAFMNSMVLPEVAKMESAAAAMDTAPAEGVDDKNGKSTKDAVSNG 334
Query: 201 XXNMPKSKVGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIVDHSKV 22
P+ +GRI QG+DS+ + D EF+KRVKK+K EKL+IVDHSK+
Sbjct: 335 DKKGPRRAMGRIMQGDDSESDYDDADNEGAGEEDEDDEEFIKRVKKTKAEKLAIVDHSKI 394
Query: 21 QYIPFRK 1
Y PFRK
Sbjct: 395 DYQPFRK 401
>gb|EXB56258.1| DEAD-box ATP-dependent RNA helicase 42 [Morus notabilis]
Length = 1140
Score = 127 bits (319), Expect = 8e-27
Identities = 89/249 (35%), Positives = 117/249 (46%), Gaps = 39/249 (15%)
Frame = -2
Query: 630 KSEDSDEEAREK-RKKDDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKNDN--------GG 478
KS ++++ +K +++++E EQ +LDEEMEKRRRRVQEWQE+RRKK +
Sbjct: 210 KSRSAEDDLDKKPTREEELEEEQHKLDEEMEKRRRRVQEWQELRRKKEEAETEKQGEANA 269
Query: 477 NEAKEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPMDVDK------- 319
E K GKTWTL M +D
Sbjct: 270 EEPKSGKTWTLEGESDDEEVPSTGKVETAMEIDGEANPNKGVTDE---MAIDSENGSAPS 326
Query: 318 ------NGTADDDEIDPLDAFMNSLVVPEATPQENMTXXXXXXXXXXNMPKSK------- 178
+GT+ D+EIDPLDAFMNS+V+PE N + ++ K K
Sbjct: 327 ALQNGVDGTSGDEEIDPLDAFMNSMVLPEVEKLNNASEPASIDGKSLDLNKDKKDDQSKD 386
Query: 177 ----------VGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIVDHS 28
+GRI GEDS+ + + EFMKRVKK+K EKLSIVDHS
Sbjct: 387 EPWRKGPNKSMGRIIPGEDSESDYEDVENDGDPLEDEDDDEFMKRVKKTKAEKLSIVDHS 446
Query: 27 KVQYIPFRK 1
K+ YIPFRK
Sbjct: 447 KIDYIPFRK 455
>gb|AFW57263.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 1065
Score = 127 bits (319), Expect = 8e-27
Identities = 91/250 (36%), Positives = 117/250 (46%), Gaps = 37/250 (14%)
Frame = -2
Query: 639 SRRKSEDSDEEA---REKRKKDDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKNDNGG--- 478
SR + E EEA R+++K++DMEAEQ+RLD+EME+RRRRV+EWQE RR++ G
Sbjct: 158 SREEEEVDAEEAERRRQRKKEEDMEAEQQRLDDEMERRRRRVKEWQEKRREQQQQDGSVA 217
Query: 477 -----------NEAKEGKTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPM 331
+ AK GK WTL
Sbjct: 218 SGASAAVAAEADGAKAGKKWTLDGEESDEEEDKEDGKKAEGNGGAGDMDVGLPSG----- 272
Query: 330 DVDKNGTA--DDDEIDPLDAFMNSLVVPEATPQENMTXXXXXXXXXXNMPKS-------- 181
+ D NG A ++DEIDPLDAFMNS+V+PE E+ K+
Sbjct: 273 NGDANGGAEMEEDEIDPLDAFMNSMVLPEVAKLESAAVAMDTAPAAGADGKNGKSSKDVI 332
Query: 180 ----------KVGRIRQGEDSDYESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIVDH 31
GRI QG+DSD + D EF+KRVKK+K EKL+IVDH
Sbjct: 333 SNGDKKGSRKATGRIMQGDDSDSDYDDADDDGAGEDDEDDEEFIKRVKKTKAEKLAIVDH 392
Query: 30 SKVQYIPFRK 1
SK+ Y PFRK
Sbjct: 393 SKIDYQPFRK 402
>ref|NP_187573.1| DEAD-box ATP-dependent RNA helicase 45 [Arabidopsis thaliana]
gi|75337164|sp|Q9SF41.1|RH45_ARATH RecName:
Full=DEAD-box ATP-dependent RNA helicase 45
gi|6682258|gb|AAF23310.1|AC016661_35 putative RNA
helicase [Arabidopsis thaliana]
gi|332641267|gb|AEE74788.1| DEAD-box ATP-dependent RNA
helicase 45 [Arabidopsis thaliana]
Length = 989
Score = 126 bits (317), Expect = 1e-26
Identities = 85/227 (37%), Positives = 112/227 (49%), Gaps = 17/227 (7%)
Frame = -2
Query: 630 KSEDSDEEAREKRKKDDMEAEQKRLDEEMEKRRRRVQEWQEMRRKKNDNGGNEAK---EG 460
+S D++ +K + + +E EQK+L EE+EKRRRRVQEWQE++R+ N+ E+K G
Sbjct: 133 RSRHGDDDVEKKTRDEQVEDEQKQLAEEVEKRRRRVQEWQELKRQ-NEEAQIESKGPETG 191
Query: 459 KTWTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAP-MDVDKNG---TADDDEI 292
K WTL + V +NG AD+DEI
Sbjct: 192 KAWTLDGESDDEVKSDSEMDVDRDTKLENGGDAKMVASENETAVTVSENGGDRAADEDEI 251
Query: 291 DPLDAFMNSLVVPEATPQEN----------MTXXXXXXXXXXNMPKSKVGRIRQGEDSDY 142
DPLDAFMN++V+PE N M K+ +GRI QGEDSD
Sbjct: 252 DPLDAFMNTMVLPEVEKLSNIVIDGILDFKMNGKETGDQAKKGFNKAALGRIIQGEDSDS 311
Query: 141 ESDVGXXXXXXXXXXXXXEFMKRVKKSKVEKLSIVDHSKVQYIPFRK 1
+ EFMKRVKK+K EKLS+VDHSK++Y PFRK
Sbjct: 312 DYSEPKSDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSKIEYEPFRK 358