BLASTX nr result
ID: Ephedra25_contig00021573
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00021573
(816 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006849794.1| hypothetical protein AMTR_s00176p00039530 [A... 68 3e-09
gb|ACH53360.1| RNA-directed RNA polymerase 1a [Hordeum vulgare] 67 6e-09
gb|AAR91037.1| RNA-directed RNA polymerase 2 [Hordeum vulgare su... 67 6e-09
gb|EAY87440.1| hypothetical protein OsI_08849 [Oryza sativa Indi... 65 4e-08
ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutr... 64 6e-08
gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis] 64 8e-08
gb|EOY01384.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobro... 63 1e-07
gb|ACH53361.1| RNA-directed RNA polymerase 1b [Hordeum vulgare] 63 1e-07
gb|AAR91036.1| RNA-directed RNA polymerase 1 [Hordeum vulgare su... 62 2e-07
ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis ... 61 5e-07
gb|EEE57765.1| hypothetical protein OsJ_08301 [Oryza sativa Japo... 61 5e-07
emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis hall... 59 2e-06
ref|XP_004953848.1| PREDICTED: probable RNA-dependent RNA polyme... 58 5e-06
ref|XP_004498237.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 57 6e-06
ref|XP_004498236.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 57 6e-06
>ref|XP_006849794.1| hypothetical protein AMTR_s00176p00039530 [Amborella trichopoda]
gi|548853371|gb|ERN11375.1| hypothetical protein
AMTR_s00176p00039530 [Amborella trichopoda]
Length = 1210
Score = 68.2 bits (165), Expect = 3e-09
Identities = 51/189 (26%), Positives = 90/189 (47%)
Frame = -2
Query: 572 RTVKITNVPANTDAMXXXXXXXXXXXXKGCVYACKVLPTKNPRHETTQAIVQFERELVAQ 393
RTV+++ P T A G VY K+ K+ + AIVQF A+
Sbjct: 76 RTVQVSGFPQGTCA-EAVKKFLESITGFGTVYHLKIRIHKSKPNSRVFAIVQFTTSKSAE 134
Query: 392 KLCGISEMELTYKLILLLYKDSHVLSVDPLERDLVKRPRRGPVEVATTRVYLGCQVNHNE 213
+ ++ + L + +S+V+ V +E D+V PR + + ++Y G Q++
Sbjct: 135 VIYSLAPQPKS-----LYFGNSYVI-VRYMENDIVPNPRVTYHVLESIQLYFGNQISEES 188
Query: 212 YCVLWSSTGHVDFELCANMKKVFIVLTDHGIKYMLVSSFGSIQRMHHYGSASRGTKYLVM 33
+ +LWS+T +V E +KK+F L G+ Y L + +I ++ + GT+YLV+
Sbjct: 189 FAILWSNT-NVKVEFGFGLKKIFFYLAHTGVDYKLDLYYENIWQIQLRRPGTEGTRYLVL 247
Query: 32 PLYCAPSVF 6
+ AP +F
Sbjct: 248 QMQGAPRIF 256
>gb|ACH53360.1| RNA-directed RNA polymerase 1a [Hordeum vulgare]
Length = 1114
Score = 67.4 bits (163), Expect = 6e-09
Identities = 51/162 (31%), Positives = 74/162 (45%), Gaps = 1/162 (0%)
Frame = -2
Query: 488 GCVYACKVLPTKN-PRHETTQAIVQFERELVAQKLCGISEMELTYKLILLLYKDSHVLSV 312
G V A K+ P KN + + AIVQFE E A + + L S+ L V
Sbjct: 31 GKVCAVKLRPPKNISANSRSFAIVQFETEAHASLVVNAARGNA-------LRSGSNYLKV 83
Query: 311 DPLERDLVKRPRRGPVEVATTRVYLGCQVNHNEYCVLWSSTGHVDFELCANMKKVFIVLT 132
P ERD++ +PR + ++ GC + VLWS TG V E MKK+ LT
Sbjct: 84 RPAERDIILKPRTALFNLEDATLHFGCLLRERVLSVLWSGTG-VSVEFGFAMKKIDFCLT 142
Query: 131 DHGIKYMLVSSFGSIQRMHHYGSASRGTKYLVMPLYCAPSVF 6
+ KY L S+ SI + Y K+L++ + AP ++
Sbjct: 143 YNLKKYKLELSYESIWEIQLYHPPGSQKKFLLIQVMAAPKIY 184
>gb|AAR91037.1| RNA-directed RNA polymerase 2 [Hordeum vulgare subsp. vulgare]
Length = 1115
Score = 67.4 bits (163), Expect = 6e-09
Identities = 51/162 (31%), Positives = 74/162 (45%), Gaps = 1/162 (0%)
Frame = -2
Query: 488 GCVYACKVLPTKN-PRHETTQAIVQFERELVAQKLCGISEMELTYKLILLLYKDSHVLSV 312
G V A K+ P KN + + AIVQFE E A + + L S+ L V
Sbjct: 31 GKVCAVKLRPPKNISANSRSFAIVQFETEAHASLVVNAARGNA-------LRSGSNYLKV 83
Query: 311 DPLERDLVKRPRRGPVEVATTRVYLGCQVNHNEYCVLWSSTGHVDFELCANMKKVFIVLT 132
P ERD++ +PR + ++ GC + VLWS TG V E MKK+ LT
Sbjct: 84 RPAERDIILKPRTALFNLEDATLHFGCLLRERVLSVLWSGTG-VSVEFGFAMKKIDFCLT 142
Query: 131 DHGIKYMLVSSFGSIQRMHHYGSASRGTKYLVMPLYCAPSVF 6
+ KY L S+ SI + Y K+L++ + AP ++
Sbjct: 143 YNLKKYKLELSYESIWEIQLYHPPGSQKKFLLIQVMAAPKIY 184
>gb|EAY87440.1| hypothetical protein OsI_08849 [Oryza sativa Indica Group]
Length = 1067
Score = 64.7 bits (156), Expect = 4e-08
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 3/164 (1%)
Frame = -2
Query: 488 GCVYACKVLPTKNPRHET-TQAIVQFERELVAQKLCGISEMELTYKLILLLYKDSHVLSV 312
G VYA K+ KN + AIVQF+ E A + ++ ++ L + + L V
Sbjct: 31 GNVYAVKLRHPKNVTATSRAYAIVQFQTEEHASLVKNAAQRKI-------LRRGHYYLKV 83
Query: 311 DPLERDLVKRPRRGPVEVATTRVYLGCQVNHNEYCVLWSSTGHVDFELCANMKKV--FIV 138
P +RD+V RPR ++ ++ GC + LWS TG V E N+KK+ ++
Sbjct: 84 HPSDRDIVPRPRVSMFKLEDVTLHFGCLLKETILSALWSRTG-VSVEFGFNLKKIYFYLQ 142
Query: 137 LTDHGIKYMLVSSFGSIQRMHHYGSASRGTKYLVMPLYCAPSVF 6
L + I+Y L S+ SI + TK+L++ + AP ++
Sbjct: 143 LPNSSIEYKLELSYESIWEIQLQRPPKSQTKFLLIQVQAAPKIY 186
>ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutrema salsugineum]
gi|557094740|gb|ESQ35322.1| hypothetical protein
EUTSA_v10006629mg [Eutrema salsugineum]
Length = 1108
Score = 63.9 bits (154), Expect = 6e-08
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 2/163 (1%)
Frame = -2
Query: 488 GCVYACKVLPTKN--PRHETTQAIVQFERELVAQKLCGISEMELTYKLILLLYKDSHVLS 315
G VYA KV K PR AIVQF E A+ + +E L Y L
Sbjct: 30 GTVYAIKVRQPKKGGPR---VYAIVQFTNERHARWIITRAEEGLYY--------GRSYLK 78
Query: 314 VDPLERDLVKRPRRGPVEVATTRVYLGCQVNHNEYCVLWSSTGHVDFELCANMKKVFIVL 135
+E+D+V +PR +++ ++Y GCQV + VLWS+ +V M+K+ +
Sbjct: 79 ASEVEQDIVPKPRASLHKISDLKIYFGCQVTPKKLSVLWSAQ-NVCVSFGTGMRKLHFSI 137
Query: 134 TDHGIKYMLVSSFGSIQRMHHYGSASRGTKYLVMPLYCAPSVF 6
+ + Y L + +I R+ Y R +K+LV+ + AP +F
Sbjct: 138 SWYEKDYRLELPYENIWRIDLYSPQGRASKFLVIQVIGAPKIF 180
>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
Length = 1133
Score = 63.5 bits (153), Expect = 8e-08
Identities = 46/189 (24%), Positives = 89/189 (47%)
Frame = -2
Query: 572 RTVKITNVPANTDAMXXXXXXXXXXXXKGCVYACKVLPTKNPRHETTQAIVQFERELVAQ 393
+T++++ P++ A +G VYA K+ PTKN + AIVQF A+
Sbjct: 3 KTIQLSGFPSHVSA-ESVKEFLEGHTGRGTVYAIKIRPTKNGGSRS-YAIVQFMTVETAE 60
Query: 392 KLCGISEMELTYKLILLLYKDSHVLSVDPLERDLVKRPRRGPVEVATTRVYLGCQVNHNE 213
+ ++ L Y LL + +ERD+V +PR + ++ GCQ++ +
Sbjct: 61 LIIRLANPRLWYGRSYLLAR--------VMERDIVPKPRATLYSLQNVTLHFGCQISKEK 112
Query: 212 YCVLWSSTGHVDFELCANMKKVFIVLTDHGIKYMLVSSFGSIQRMHHYGSASRGTKYLVM 33
+ LW G+V + ++++ LT ++Y L + ++ ++ + + KYL++
Sbjct: 113 FSFLW-RVGNVSVDFGLGLRRLNFYLTYGPVEYRLQLLYENVWQIELHRPRGQTAKYLLI 171
Query: 32 PLYCAPSVF 6
L AP V+
Sbjct: 172 QLLGAPRVY 180
>gb|EOY01384.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
gi|508709488|gb|EOY01385.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao]
gi|508709489|gb|EOY01386.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao]
Length = 1109
Score = 62.8 bits (151), Expect = 1e-07
Identities = 46/189 (24%), Positives = 88/189 (46%)
Frame = -2
Query: 572 RTVKITNVPANTDAMXXXXXXXXXXXXKGCVYACKVLPTKNPRHETTQAIVQFERELVAQ 393
+T++++ P+N A + VYA K+ KN AIVQF + A+
Sbjct: 3 KTIQVSRFPSNVHAEEVKTFLELYTGKE-TVYALKIRQQKNGGR--AYAIVQFTKSTDAE 59
Query: 392 KLCGISEMELTYKLILLLYKDSHVLSVDPLERDLVKRPRRGPVEVATTRVYLGCQVNHNE 213
+ ++ L Y S L +E D+V +PR + ++ GCQV++ +
Sbjct: 60 LIIRLTNQRLYY--------GSSYLKAREMENDIVPKPRTFLHTMEGVTLHFGCQVSNEK 111
Query: 212 YCVLWSSTGHVDFELCANMKKVFIVLTDHGIKYMLVSSFGSIQRMHHYGSASRGTKYLVM 33
+ VLW V M+K+ +L+ H ++Y L + +I ++ + ++ +KYL++
Sbjct: 112 FYVLWEEV-DVTVNFGMGMRKLQFLLSHHCVEYRLDLFYENIWQIELHRPRNQTSKYLLI 170
Query: 32 PLYCAPSVF 6
L+ AP ++
Sbjct: 171 QLFGAPRIY 179
>gb|ACH53361.1| RNA-directed RNA polymerase 1b [Hordeum vulgare]
Length = 1115
Score = 62.8 bits (151), Expect = 1e-07
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 1/162 (0%)
Frame = -2
Query: 488 GCVYACKVLPTKN-PRHETTQAIVQFERELVAQKLCGISEMELTYKLILLLYKDSHVLSV 312
G V+A K+ P KN + + AIVQF+ E A + ++ L SH L
Sbjct: 31 GNVFAVKLRPPKNISANSRSFAIVQFQSEAHASLVLNAAQRNA-------LRSGSHYLKA 83
Query: 311 DPLERDLVKRPRRGPVEVATTRVYLGCQVNHNEYCVLWSSTGHVDFELCANMKKVFIVLT 132
ERD+V RPR + +++ GC + VLWS T +V E MK++ L
Sbjct: 84 RYAERDIVPRPRTTIFNLQGAKLHFGCLLKERVLSVLWSGT-NVSVEFGFAMKRIDFCLI 142
Query: 131 DHGIKYMLVSSFGSIQRMHHYGSASRGTKYLVMPLYCAPSVF 6
+ KY L S+ SI + + K+L++ + AP ++
Sbjct: 143 YNSKKYKLELSYESIWEIQLHRPPGLQKKFLLIQVQAAPKIY 184
>gb|AAR91036.1| RNA-directed RNA polymerase 1 [Hordeum vulgare subsp. vulgare]
Length = 1115
Score = 62.0 bits (149), Expect = 2e-07
Identities = 47/162 (29%), Positives = 73/162 (45%), Gaps = 1/162 (0%)
Frame = -2
Query: 488 GCVYACKVLPTKN-PRHETTQAIVQFERELVAQKLCGISEMELTYKLILLLYKDSHVLSV 312
G V+A K+ P KN + + AIVQF+ E A + ++ L SH L
Sbjct: 31 GNVFAVKLRPPKNISANSRSFAIVQFQSEAHASLVLNAAQRNA-------LRSGSHYLKA 83
Query: 311 DPLERDLVKRPRRGPVEVATTRVYLGCQVNHNEYCVLWSSTGHVDFELCANMKKVFIVLT 132
ERD+V RPR + +++ GC + VLWS T V E MK++ L
Sbjct: 84 RYAERDIVPRPRTTIFNLQGAKLHFGCLLKERVLSVLWSGT-DVSVEFGFAMKRIDFCLI 142
Query: 131 DHGIKYMLVSSFGSIQRMHHYGSASRGTKYLVMPLYCAPSVF 6
+ KY L S+ SI + + K+L++ + AP ++
Sbjct: 143 YNSKKYKLELSYESIWEIQLHRPPGLQKKFLLIQVQAAPKIY 184
>ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
gi|297338672|gb|EFH69089.1| RNA-dependent RNA polymerase
1 [Arabidopsis lyrata subsp. lyrata]
Length = 1107
Score = 60.8 bits (146), Expect = 5e-07
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 3/164 (1%)
Frame = -2
Query: 488 GCVYACKVLPTKN--PRHETTQAIVQFERELVAQKLC-GISEMELTYKLILLLYKDSHVL 318
G VYA KV K PR AIVQF E+ A+++ G +E L Y L
Sbjct: 30 GTVYAIKVRQPKKGGPR---VFAIVQFTNEIYARQIITGAAERRLYY--------GRSYL 78
Query: 317 SVDPLERDLVKRPRRGPVEVATTRVYLGCQVNHNEYCVLWSSTGHVDFELCANMKKVFIV 138
+ +E+D+V +PR ++ ++Y GCQV+ LWS+ V M+K+
Sbjct: 79 NAFEVEQDIVPKPRASLHNISGLKMYFGCQVSTQTLLTLWSAQ-DVSVSFGIGMRKLHFS 137
Query: 137 LTDHGIKYMLVSSFGSIQRMHHYGSASRGTKYLVMPLYCAPSVF 6
+ + Y L S+ +I ++ + R +K+LV+ + AP +F
Sbjct: 138 FSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIF 181
>gb|EEE57765.1| hypothetical protein OsJ_08301 [Oryza sativa Japonica Group]
Length = 1027
Score = 60.8 bits (146), Expect = 5e-07
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 3/164 (1%)
Frame = -2
Query: 488 GCVYACKVLPTKNPRHET-TQAIVQFERELVAQKLCGISEMELTYKLILLLYKDSHVLSV 312
G VYA K+ KN + AIVQF+ E A + ++ ++ L + + L V
Sbjct: 31 GNVYAVKLRHPKNVTATSRAYAIVQFQTEEHASLVKNAAQRKI-------LRRGHYYLKV 83
Query: 311 DPLERDLVKRPRRGPVEVATTRVYLGCQVNHNEYCVLWSSTGHVDFELCANMKKV--FIV 138
P +RD+V RPR ++ ++ GC + LWS G V E N+KK+ ++
Sbjct: 84 HPSDRDIVPRPRVSMFKLEDVTLHFGCLLKETILSALWSRKG-VSVEFGFNLKKIYFYLQ 142
Query: 137 LTDHGIKYMLVSSFGSIQRMHHYGSASRGTKYLVMPLYCAPSVF 6
L + I+Y L S SI + TK+L++ + AP ++
Sbjct: 143 LPNSSIEYKLELSHESIWEIQLQRPPKSQTKFLLIQVQAAPKIY 186
>emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis halleri subsp. halleri]
Length = 1107
Score = 59.3 bits (142), Expect = 2e-06
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 3/164 (1%)
Frame = -2
Query: 488 GCVYACKVLPTKN--PRHETTQAIVQFERELVAQKLC-GISEMELTYKLILLLYKDSHVL 318
G VYA KV K PR AIVQF E A+++ G +E L Y L
Sbjct: 30 GTVYAIKVRQPKKGGPR---VFAIVQFTNERYARQIITGAAERRLYY--------GRSYL 78
Query: 317 SVDPLERDLVKRPRRGPVEVATTRVYLGCQVNHNEYCVLWSSTGHVDFELCANMKKVFIV 138
+ +++D+V +PR ++ ++Y GCQV+ ++ LWS+ V M+K+
Sbjct: 79 NAFEVDQDIVPKPRASLHNISGLKMYFGCQVSTQKFLTLWSAQ-DVCVSFGIGMRKLHFS 137
Query: 137 LTDHGIKYMLVSSFGSIQRMHHYGSASRGTKYLVMPLYCAPSVF 6
+ + Y L S+ +I ++ + R +K+LV+ + AP +F
Sbjct: 138 FSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIF 181
>ref|XP_004953848.1| PREDICTED: probable RNA-dependent RNA polymerase 1-like [Setaria
italica]
Length = 1123
Score = 57.8 bits (138), Expect = 5e-06
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 6/195 (3%)
Frame = -2
Query: 572 RTVKITNVPANTDAMXXXXXXXXXXXXKGCVYACKVLPTKNPRHETTQ----AIVQFERE 405
RT++++ A TD+ G VYA K+ ++PR+ T AIVQF+ +
Sbjct: 3 RTIQVSGF-ALTDSAEYVKDFLERIAGAGTVYALKL---RHPRNITATSKAFAIVQFQTQ 58
Query: 404 LVAQKLCGISEMELTYKLILLLYKDSHVLSVDPLERDLVKRPRRGPVEVATTRVYLGCQV 225
A + ++ + L P +RD+V RPR + ++LGC V
Sbjct: 59 ECASLVENAAQRNALRSRCIYL-------KARPADRDIVPRPRIAMFSLDAAALHLGCLV 111
Query: 224 NHNEYCVLWSSTGHVDFELCANMKKVFIVLTDHGIKYMLVSSFGSI--QRMHHYGSASRG 51
N L+ S ++ + +MKK++ L+ + IKY L S+ SI ++H +
Sbjct: 112 KENILYTLF-SVRNISVQFGFDMKKIYFYLSYNLIKYKLELSYESIWEMQLHRPPAYLSQ 170
Query: 50 TKYLVMPLYCAPSVF 6
TK+L+ + AP ++
Sbjct: 171 TKFLLFQVQAAPKIY 185
>ref|XP_004498237.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Cicer
arietinum]
Length = 1100
Score = 57.4 bits (137), Expect = 6e-06
Identities = 43/161 (26%), Positives = 72/161 (44%)
Frame = -2
Query: 488 GCVYACKVLPTKNPRHETTQAIVQFERELVAQKLCGISEMELTYKLILLLYKDSHVLSVD 309
G V A K+ K R + AI+QF A + + T +L Y +S+ L +
Sbjct: 32 GSVVAIKIREGK-ARVQRAYAIIQFNTANQATHMLSLHNRSST----MLRYGNSY-LKIR 85
Query: 308 PLERDLVKRPRRGPVEVATTRVYLGCQVNHNEYCVLWSSTGHVDFELCANMKKVFIVLTD 129
+ RD+V PR + +Y GCQ++ + +LW V +L A M+K +
Sbjct: 86 EMVRDIVPNPRTYLESLDDVTLYFGCQISKERFSILWRKR-DVSVDLSAGMRKWRFCMCH 144
Query: 128 HGIKYMLVSSFGSIQRMHHYGSASRGTKYLVMPLYCAPSVF 6
K+ S+ +I ++ Y + KYL++ L AP +F
Sbjct: 145 DNKKFKFDLSYENIWKIEQYQPWGKTAKYLLIQLIGAPRIF 185
>ref|XP_004498236.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Cicer
arietinum]
Length = 1126
Score = 57.4 bits (137), Expect = 6e-06
Identities = 43/161 (26%), Positives = 72/161 (44%)
Frame = -2
Query: 488 GCVYACKVLPTKNPRHETTQAIVQFERELVAQKLCGISEMELTYKLILLLYKDSHVLSVD 309
G V A K+ K R + AI+QF A + + T +L Y +S+ L +
Sbjct: 32 GSVVAIKIREGK-ARVQRAYAIIQFNTANQATHMLSLHNRSST----MLRYGNSY-LKIR 85
Query: 308 PLERDLVKRPRRGPVEVATTRVYLGCQVNHNEYCVLWSSTGHVDFELCANMKKVFIVLTD 129
+ RD+V PR + +Y GCQ++ + +LW V +L A M+K +
Sbjct: 86 EMVRDIVPNPRTYLESLDDVTLYFGCQISKERFSILWRKR-DVSVDLSAGMRKWRFCMCH 144
Query: 128 HGIKYMLVSSFGSIQRMHHYGSASRGTKYLVMPLYCAPSVF 6
K+ S+ +I ++ Y + KYL++ L AP +F
Sbjct: 145 DNKKFKFDLSYENIWKIEQYQPWGKTAKYLLIQLIGAPRIF 185