BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00020926
         (578 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006853609.1| hypothetical protein AMTR_s00056p00043140 [A...   103   2e-20
ref|XP_006483899.1| PREDICTED: CRS2-associated factor 2, chlorop...   102   9e-20
ref|XP_006438328.1| hypothetical protein CICLE_v10031138mg [Citr...   102   9e-20
ref|XP_002535109.1| conserved hypothetical protein [Ricinus comm...   101   1e-19
ref|XP_006494323.1| PREDICTED: CRS2-associated factor 1, chlorop...   101   2e-19
ref|XP_006451251.1| hypothetical protein CICLE_v100106541mg, par...   101   2e-19
gb|EOY30694.1| RNA-binding CRS1 / YhbY domain-containing protein...   100   2e-19
ref|XP_006408916.1| hypothetical protein EUTSA_v10001924mg [Eutr...   100   3e-19
ref|XP_002886005.1| hypothetical protein ARALYDRAFT_480467 [Arab...   100   3e-19
gb|EXB82569.1| CRS2-associated factor 2 [Morus notabilis]             100   4e-19
ref|XP_004503464.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...   100   4e-19
ref|NP_565462.1| CRS2-associated factor 1 [Arabidopsis thaliana]...   100   4e-19
gb|EXB59798.1| CRS2-associated factor 1 [Morus notabilis]             100   5e-19
ref|XP_006840310.1| hypothetical protein AMTR_s00045p00074390 [A...   100   5e-19
ref|XP_006297110.1| hypothetical protein CARUB_v10013113mg [Caps...   100   5e-19
ref|XP_006338151.1| PREDICTED: CRS2-associated factor 1, chlorop...    99   6e-19
ref|XP_006389456.1| hypothetical protein POPTR_0024s00430g [Popu...    99   6e-19
gb|EOY00533.1| RNA-binding CRS1 / YhbY (CRM) domain-containing p...    99   6e-19
ref|NP_001043122.1| Os01g0495900 [Oryza sativa Japonica Group] g...    99   6e-19
ref|XP_002332503.1| predicted protein [Populus trichocarpa]            99   6e-19

>ref|XP_006853609.1| hypothetical protein AMTR_s00056p00043140 [Amborella trichopoda]
           gi|548857270|gb|ERN15076.1| hypothetical protein
           AMTR_s00056p00043140 [Amborella trichopoda]
          Length = 977

 Score =  103 bits (258), Expect = 2e-20
 Identities = 47/68 (69%), Positives = 58/68 (85%)
 Frame = -3

Query: 576 CKLGIHGVYLNLVKRVKEAFESSELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFEREC 397
           CKL  +GVY++LVK VKEAFE  ELVRI C+G+ +SDYK+IG KLK++VPCVL+SFE E 
Sbjct: 546 CKLAKNGVYVDLVKNVKEAFEECELVRINCQGLNASDYKKIGAKLKDIVPCVLISFENEH 605

Query: 396 ILMWRGKD 373
           ILMWRG+D
Sbjct: 606 ILMWRGRD 613


>ref|XP_006483899.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Citrus
           sinensis]
          Length = 552

 Score =  102 bits (253), Expect = 9e-20
 Identities = 47/68 (69%), Positives = 56/68 (82%)
 Frame = -3

Query: 576 CKLGIHGVYLNLVKRVKEAFESSELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFEREC 397
           CKL  +GVYL LV+ V+ AFE S LV++ CKGM +SDYK++G KLKELVPCVLLSF+ E 
Sbjct: 327 CKLAKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQ 386

Query: 396 ILMWRGKD 373
           ILMWRGKD
Sbjct: 387 ILMWRGKD 394


>ref|XP_006438328.1| hypothetical protein CICLE_v10031138mg [Citrus clementina]
           gi|557540524|gb|ESR51568.1| hypothetical protein
           CICLE_v10031138mg [Citrus clementina]
          Length = 552

 Score =  102 bits (253), Expect = 9e-20
 Identities = 47/68 (69%), Positives = 56/68 (82%)
 Frame = -3

Query: 576 CKLGIHGVYLNLVKRVKEAFESSELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFEREC 397
           CKL  +GVYL LV+ V+ AFE S LV++ CKGM +SDYK++G KLKELVPCVLLSF+ E 
Sbjct: 327 CKLAKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQ 386

Query: 396 ILMWRGKD 373
           ILMWRGKD
Sbjct: 387 ILMWRGKD 394


>ref|XP_002535109.1| conserved hypothetical protein [Ricinus communis]
           gi|223524018|gb|EEF27274.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 748

 Score =  101 bits (252), Expect = 1e-19
 Identities = 46/68 (67%), Positives = 56/68 (82%)
 Frame = -3

Query: 576 CKLGIHGVYLNLVKRVKEAFESSELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFEREC 397
           CKL  +GVY NLVK V+EAFE  ELVRI C+G+  SDY+++G KLKELVPC+L+SFE E 
Sbjct: 389 CKLAKNGVYCNLVKEVREAFEECELVRIDCQGVNGSDYRKVGAKLKELVPCLLISFEHEH 448

Query: 396 ILMWRGKD 373
           ILMWRG+D
Sbjct: 449 ILMWRGRD 456


>ref|XP_006494323.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Citrus
           sinensis]
          Length = 837

 Score =  101 bits (251), Expect = 2e-19
 Identities = 46/68 (67%), Positives = 57/68 (83%)
 Frame = -3

Query: 576 CKLGIHGVYLNLVKRVKEAFESSELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFEREC 397
           CKLG +GVY +L K V+EAFE  ELVRI C+GM  SDY++IG KL++LVPCVL+SFERE 
Sbjct: 395 CKLGKNGVYCDLAKNVREAFEVCELVRINCQGMNGSDYRKIGAKLRDLVPCVLISFEREH 454

Query: 396 ILMWRGKD 373
           ILMWRG++
Sbjct: 455 ILMWRGQE 462


>ref|XP_006451251.1| hypothetical protein CICLE_v100106541mg, partial [Citrus
           clementina] gi|557554477|gb|ESR64491.1| hypothetical
           protein CICLE_v100106541mg, partial [Citrus clementina]
          Length = 825

 Score =  101 bits (251), Expect = 2e-19
 Identities = 46/68 (67%), Positives = 57/68 (83%)
 Frame = -3

Query: 576 CKLGIHGVYLNLVKRVKEAFESSELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFEREC 397
           CKLG +GVY +L K V+EAFE  ELVRI C+GM  SDY++IG KL++LVPCVL+SFERE 
Sbjct: 401 CKLGKNGVYCDLAKNVREAFEVCELVRINCQGMNGSDYRKIGAKLRDLVPCVLISFEREH 460

Query: 396 ILMWRGKD 373
           ILMWRG++
Sbjct: 461 ILMWRGQE 468


>gb|EOY30694.1| RNA-binding CRS1 / YhbY domain-containing protein, putative
           [Theobroma cacao]
          Length = 767

 Score =  100 bits (250), Expect = 2e-19
 Identities = 45/68 (66%), Positives = 57/68 (83%)
 Frame = -3

Query: 576 CKLGIHGVYLNLVKRVKEAFESSELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFEREC 397
           CKL  +GVY +LVK V+EAFE  ELVR+ C+G++ SDY++IG KLKELVPCVL+SFE E 
Sbjct: 387 CKLAKNGVYSDLVKNVREAFEECELVRVNCEGIKGSDYRKIGAKLKELVPCVLISFENES 446

Query: 396 ILMWRGKD 373
           ILMWRG++
Sbjct: 447 ILMWRGRN 454


>ref|XP_006408916.1| hypothetical protein EUTSA_v10001924mg [Eutrema salsugineum]
           gi|557110072|gb|ESQ50369.1| hypothetical protein
           EUTSA_v10001924mg [Eutrema salsugineum]
          Length = 678

 Score =  100 bits (249), Expect = 3e-19
 Identities = 46/68 (67%), Positives = 58/68 (85%)
 Frame = -3

Query: 576 CKLGIHGVYLNLVKRVKEAFESSELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFEREC 397
           CKLG +GVY +LVK VKEAFE  ELVRI C+GM+ SD+++IG KLK+LVPCVL+SFE E 
Sbjct: 380 CKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLKDLVPCVLISFENEQ 439

Query: 396 ILMWRGKD 373
           IL+WRG++
Sbjct: 440 ILIWRGRE 447


>ref|XP_002886005.1| hypothetical protein ARALYDRAFT_480467 [Arabidopsis lyrata subsp.
           lyrata] gi|297331845|gb|EFH62264.1| hypothetical protein
           ARALYDRAFT_480467 [Arabidopsis lyrata subsp. lyrata]
          Length = 700

 Score =  100 bits (249), Expect = 3e-19
 Identities = 46/68 (67%), Positives = 58/68 (85%)
 Frame = -3

Query: 576 CKLGIHGVYLNLVKRVKEAFESSELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFEREC 397
           CKLG +GVY +LVK VKEAFE  ELVRI C+GM+ SD+++IG KLK+LVPCVL+SFE E 
Sbjct: 380 CKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLKDLVPCVLISFENEQ 439

Query: 396 ILMWRGKD 373
           IL+WRG++
Sbjct: 440 ILIWRGRE 447


>gb|EXB82569.1| CRS2-associated factor 2 [Morus notabilis]
          Length = 571

 Score =  100 bits (248), Expect = 4e-19
 Identities = 47/68 (69%), Positives = 56/68 (82%)
 Frame = -3

Query: 576 CKLGIHGVYLNLVKRVKEAFESSELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFEREC 397
           CKL  +GVY++LVK V+ AFE S LV+I CKGM +SDYK++G KLKELVPCVLLSF+ E 
Sbjct: 346 CKLAKNGVYISLVKDVRHAFEGSPLVKIDCKGMHASDYKKLGAKLKELVPCVLLSFDDEQ 405

Query: 396 ILMWRGKD 373
           ILMWRG D
Sbjct: 406 ILMWRGSD 413


>ref|XP_004503464.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 1,
           chloroplastic-like [Cicer arietinum]
          Length = 706

 Score =  100 bits (248), Expect = 4e-19
 Identities = 44/68 (64%), Positives = 56/68 (82%)
 Frame = -3

Query: 576 CKLGIHGVYLNLVKRVKEAFESSELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFEREC 397
           CK+G +GVY NLVK V+EAFE  ELVRI C+G+  SDY++IG KL++LVPC LLS+E E 
Sbjct: 318 CKIGKNGVYFNLVKNVREAFEECELVRINCQGLNKSDYRKIGAKLRDLVPCTLLSYENEH 377

Query: 396 ILMWRGKD 373
           ILMWRG++
Sbjct: 378 ILMWRGRN 385


>ref|NP_565462.1| CRS2-associated factor 1 [Arabidopsis thaliana]
           gi|75266026|sp|Q9SL79.2|CAF1P_ARATH RecName:
           Full=CRS2-associated factor 1, chloroplastic; AltName:
           Full=Chloroplastic group IIA intron splicing facilitator
           CRS2-associated factor 1; Flags: Precursor
           gi|15028051|gb|AAK76556.1| unknown protein [Arabidopsis
           thaliana] gi|20197570|gb|AAD24394.2| expressed protein
           [Arabidopsis thaliana] gi|28393847|gb|AAO42331.1|
           unknown protein [Arabidopsis thaliana]
           gi|330251862|gb|AEC06956.1| CRS2-associated factor 1
           [Arabidopsis thaliana]
          Length = 701

 Score =  100 bits (248), Expect = 4e-19
 Identities = 46/68 (67%), Positives = 58/68 (85%)
 Frame = -3

Query: 576 CKLGIHGVYLNLVKRVKEAFESSELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFEREC 397
           CKLG +GVY +LVK VKEAFE  ELVRI C+GM+ SD+++IG KLK+LVPCVL+SFE E 
Sbjct: 380 CKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLKDLVPCVLVSFENEQ 439

Query: 396 ILMWRGKD 373
           IL+WRG++
Sbjct: 440 ILIWRGRE 447


>gb|EXB59798.1| CRS2-associated factor 1 [Morus notabilis]
          Length = 792

 Score = 99.8 bits (247), Expect = 5e-19
 Identities = 48/68 (70%), Positives = 55/68 (80%)
 Frame = -3

Query: 576 CKLGIHGVYLNLVKRVKEAFESSELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFEREC 397
           CKLG +GVY NLVK V+EAFE  ELVRI C+GM  SDY++IG KLK+LVPCVLLSF  E 
Sbjct: 401 CKLGKNGVYHNLVKHVREAFEECELVRINCQGMNGSDYRKIGAKLKDLVPCVLLSFAFEH 460

Query: 396 ILMWRGKD 373
           IL+WRG D
Sbjct: 461 ILIWRGCD 468


>ref|XP_006840310.1| hypothetical protein AMTR_s00045p00074390 [Amborella trichopoda]
           gi|548842028|gb|ERN01985.1| hypothetical protein
           AMTR_s00045p00074390 [Amborella trichopoda]
          Length = 570

 Score = 99.8 bits (247), Expect = 5e-19
 Identities = 44/68 (64%), Positives = 58/68 (85%)
 Frame = -3

Query: 576 CKLGIHGVYLNLVKRVKEAFESSELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFEREC 397
           CKL  +GVY+ LVK V++AFE+S +V+I C+GM +SDYK++G KLKELVPC+LLSF+ E 
Sbjct: 332 CKLAKNGVYITLVKDVRDAFEASSIVKINCQGMHASDYKKLGAKLKELVPCILLSFDDEQ 391

Query: 396 ILMWRGKD 373
           ILMWRG+D
Sbjct: 392 ILMWRGQD 399


>ref|XP_006297110.1| hypothetical protein CARUB_v10013113mg [Capsella rubella]
           gi|482565819|gb|EOA30008.1| hypothetical protein
           CARUB_v10013113mg [Capsella rubella]
          Length = 689

 Score = 99.8 bits (247), Expect = 5e-19
 Identities = 45/68 (66%), Positives = 59/68 (86%)
 Frame = -3

Query: 576 CKLGIHGVYLNLVKRVKEAFESSELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFEREC 397
           CKLG +GVY +LVK VKEAFE  ELVRI C+G+++SD+++IG KLK+LVPCVL+SFE E 
Sbjct: 380 CKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGLKASDFRKIGAKLKDLVPCVLISFENEQ 439

Query: 396 ILMWRGKD 373
           IL+WRG++
Sbjct: 440 ILIWRGRE 447


>ref|XP_006338151.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Solanum
           tuberosum]
          Length = 764

 Score = 99.4 bits (246), Expect = 6e-19
 Identities = 45/68 (66%), Positives = 57/68 (83%)
 Frame = -3

Query: 576 CKLGIHGVYLNLVKRVKEAFESSELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFEREC 397
           CKL  +GVY +LVK V+EAFE+ ELV I C+G+  SDY++IG KLK+LVPCVL+SFE+E 
Sbjct: 389 CKLAKNGVYCDLVKNVREAFEACELVSINCQGLNPSDYRKIGAKLKDLVPCVLISFEQEH 448

Query: 396 ILMWRGKD 373
           ILMWRG+D
Sbjct: 449 ILMWRGRD 456


>ref|XP_006389456.1| hypothetical protein POPTR_0024s00430g [Populus trichocarpa]
           gi|550312256|gb|ERP48370.1| hypothetical protein
           POPTR_0024s00430g [Populus trichocarpa]
          Length = 731

 Score = 99.4 bits (246), Expect = 6e-19
 Identities = 45/68 (66%), Positives = 57/68 (83%)
 Frame = -3

Query: 576 CKLGIHGVYLNLVKRVKEAFESSELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFEREC 397
           CKLG +GVY +LV+ V+EAFE  ELVRI C+GM  SD+++IG KL++LVPCVL+SFE E 
Sbjct: 385 CKLGKNGVYRDLVRNVREAFEECELVRINCQGMNGSDFRKIGAKLRDLVPCVLISFECEH 444

Query: 396 ILMWRGKD 373
           ILMWRG+D
Sbjct: 445 ILMWRGRD 452


>gb|EOY00533.1| RNA-binding CRS1 / YhbY (CRM) domain-containing protein [Theobroma
           cacao]
          Length = 562

 Score = 99.4 bits (246), Expect = 6e-19
 Identities = 47/68 (69%), Positives = 56/68 (82%)
 Frame = -3

Query: 576 CKLGIHGVYLNLVKRVKEAFESSELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFEREC 397
           CKL  +GVY +LVK V++AFE S LV+I CKGM +SDYK+IG KLKEL PCVLLSF+ E 
Sbjct: 331 CKLAKNGVYASLVKDVRDAFEGSPLVKIDCKGMHASDYKKIGAKLKELAPCVLLSFDDEQ 390

Query: 396 ILMWRGKD 373
           ILMWRG+D
Sbjct: 391 ILMWRGQD 398


>ref|NP_001043122.1| Os01g0495900 [Oryza sativa Japonica Group]
           gi|75109409|sp|Q5VMQ5.1|CAF1P_ORYSJ RecName:
           Full=CRS2-associated factor 1, chloroplastic; AltName:
           Full=Chloroplastic group IIA intron splicing facilitator
           CRS2-associated factor 1; Flags: Precursor
           gi|55297418|dbj|BAD69270.1| putative CRS2-associated
           factor 1 [Oryza sativa Japonica Group]
           gi|55297612|dbj|BAD68987.1| putative CRS2-associated
           factor 1 [Oryza sativa Japonica Group]
           gi|113532653|dbj|BAF05036.1| Os01g0495900 [Oryza sativa
           Japonica Group] gi|215694476|dbj|BAG89423.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222618506|gb|EEE54638.1| hypothetical protein
           OsJ_01906 [Oryza sativa Japonica Group]
          Length = 701

 Score = 99.4 bits (246), Expect = 6e-19
 Identities = 46/68 (67%), Positives = 56/68 (82%)
 Frame = -3

Query: 576 CKLGIHGVYLNLVKRVKEAFESSELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFEREC 397
           CKLG +GVYLNLVK+V+EAFE+ +LVR+ C G+  SD ++IG KLK+LVPC LLSFE E 
Sbjct: 322 CKLGKNGVYLNLVKQVREAFEACDLVRVDCSGLNKSDCRKIGAKLKDLVPCTLLSFEFEH 381

Query: 396 ILMWRGKD 373
           ILMWRG D
Sbjct: 382 ILMWRGND 389


>ref|XP_002332503.1| predicted protein [Populus trichocarpa]
          Length = 699

 Score = 99.4 bits (246), Expect = 6e-19
 Identities = 45/68 (66%), Positives = 57/68 (83%)
 Frame = -3

Query: 576 CKLGIHGVYLNLVKRVKEAFESSELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFEREC 397
           CKLG +GVY +LV+ V+EAFE  ELVRI C+GM  SD+++IG KL++LVPCVL+SFE E 
Sbjct: 385 CKLGKNGVYRDLVRNVREAFEECELVRINCQGMNGSDFRKIGAKLRDLVPCVLISFECEH 444

Query: 396 ILMWRGKD 373
           ILMWRG+D
Sbjct: 445 ILMWRGRD 452