BLASTX nr result

ID: Ephedra25_contig00020821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00020821
         (560 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549378.1| PREDICTED: F-box protein At3g12350-like [Gly...    65   1e-08
gb|ESW32915.1| hypothetical protein PHAVU_001G028300g [Phaseolus...    60   3e-07
ref|XP_003545341.1| PREDICTED: F-box protein At3g12350-like [Gly...    60   5e-07
ref|XP_004290977.1| PREDICTED: F-box protein At3g12350-like [Fra...    57   2e-06
ref|XP_006433642.1| hypothetical protein CICLE_v10001174mg [Citr...    57   4e-06

>ref|XP_003549378.1| PREDICTED: F-box protein At3g12350-like [Glycine max]
          Length = 444

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 50/152 (32%), Positives = 70/152 (46%), Gaps = 10/152 (6%)
 Frame = -3

Query: 492 ELPEDSLTDVCKRLDVESLLNVGLVSKAMNAVASSESP-WMNLCYQRWGDVLDVTQL--- 325
           + PED    +   L    +  +   SK M ++ +++S  W ++C +RWG    +TQ    
Sbjct: 14  DFPEDIQVCILSFLGPPEIATLACTSKRMGSLCATDSKLWFSMCERRWGSYTRITQWAQG 73

Query: 324 RRETHSAKSLYSALHRLSNLVGLWNAQELYPRGG-----LLYFHWGHLCLVASRVW-SRT 163
           +  T S K LY+ LHR  NL+G W       R G     LL+F WG   + ASRV  S +
Sbjct: 74  KNPTLSFKHLYNTLHRWENLLGFWR------RSGTGIPSLLFFEWGPSFISASRVSPSAS 127

Query: 162 DGNVVLRPFFKVPIPFGGLFKIYFLSEESKVL 67
           D N V     K P      F    LSEE  V+
Sbjct: 128 DSNSVTYGVTKTP------FLWMSLSEEGHVV 153


>gb|ESW32915.1| hypothetical protein PHAVU_001G028300g [Phaseolus vulgaris]
          Length = 432

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
 Frame = -3

Query: 492 ELPEDSLTDVCKRLDVESLLNVGLVSKAMNAVASSESP-WMNLCYQRWGDVLDVTQLRRE 316
           + PED    +   LD   +  +   SK + ++ + +S  W ++C +RWG    +TQ  + 
Sbjct: 15  DFPEDIQVCILSFLDPSEIATLACTSKQLGSLCARDSKLWFSMCQRRWGSRTRITQWGKA 74

Query: 315 --THSAKSLYSALHRLSNLVGLWNAQELYPRGGLLYFHWGHLCLVASRV 175
             T S K LY+ LH   NL+G W  +       LL+F WG   + ASRV
Sbjct: 75  KGTISYKHLYNTLHHWENLLGFWR-RSGSGNPSLLFFEWGSSFISASRV 122


>ref|XP_003545341.1| PREDICTED: F-box protein At3g12350-like [Glycine max]
          Length = 435

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
 Frame = -3

Query: 492 ELPEDSLTDVCKRLDVESLLNVGLVSKAMNAVASSESP-WMNLCYQRWGDVLDVTQ-LRR 319
           + PED    +   L    +  +   SK + ++ S+ S  W ++C +RWG    +TQ  ++
Sbjct: 13  DFPEDIQVSILSFLGPSEIATLACTSKKLGSLCSTVSKLWFSMCERRWGSNTRITQWAQK 72

Query: 318 ETHSAKSLYSALHRLSNLVGLWNAQELYPRGG-----LLYFHWGHLCLVASRV 175
              S K LY  LHR  NL+G W       R G     LL+F WG   + ASRV
Sbjct: 73  PAISFKQLYHTLHRWENLLGFWR------RSGTGIPSLLFFEWGPSFISASRV 119


>ref|XP_004290977.1| PREDICTED: F-box protein At3g12350-like [Fragaria vesca subsp.
           vesca]
          Length = 452

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 4/162 (2%)
 Frame = -3

Query: 510 DGMNVWELPEDSLTDVCKRLDVESLLNVGLVSKAMNAVASSESP-WMNLCYQRWGDVLDV 334
           D ++  + PED    +   L    + +    SK   ++  ++   W ++C +RWG    +
Sbjct: 13  DTVSFSDFPEDVQLCILSFLTPPEISSFACTSKRFVSLCKNDGKLWFSMCDRRWGSRTQI 72

Query: 333 TQLRRETHSAKSLYSALHRLSNLVGLWNAQELYPRGGLLYFHWGHLCLVASRVWSRTDG- 157
            +      + ++LY  L R  NL+G W          L++F WG   L  SRV    DG 
Sbjct: 73  KKWGGGKIAYRNLYQTLSRWENLIGFWRQGGQATSPPLIFFEWGPSFLAGSRVSPAKDGG 132

Query: 156 -NVVLRPFFKVPI-PFGGLFKIYFLSEESKVLVPAELIWSSK 37
             VV  PF  + + P G +  + FL  E +  + AE + S +
Sbjct: 133 YGVVKAPFLWMSLSPEGQV--VNFLDPEGRAEISAEELSSGR 172


>ref|XP_006433642.1| hypothetical protein CICLE_v10001174mg [Citrus clementina]
           gi|557535764|gb|ESR46882.1| hypothetical protein
           CICLE_v10001174mg [Citrus clementina]
          Length = 442

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 8/134 (5%)
 Frame = -3

Query: 513 MDGMNVWELPEDSLTDVCKRLDVESLLNVGLVSKAMNAVASSESP-WMNLCYQRWGDVLD 337
           M+  +  + PED    V   L  + +      SK   ++ +S+   W ++C +RWG   +
Sbjct: 1   MESFSFSDFPEDVQLTVLSFLSPKEIATFACTSKRFGSLCNSDDKLWYSMCERRWGAETE 60

Query: 336 VTQLRRETHSAKSLYSALHRLSNLVGLWNAQELYPRGG-----LLYFHWGHLCLVASRVW 172
           + +      + K LY  L    NL+G W      P        L++F WG   L  SRV 
Sbjct: 61  IKKWGDGKIAYKLLYKTLSECENLIGFWRRSGGQPAVNFSSPPLIFFEWGPSFLAGSRVS 120

Query: 171 SRTDG--NVVLRPF 136
              DG  NV+  PF
Sbjct: 121 PSHDGTYNVLKSPF 134


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