BLASTX nr result
ID: Ephedra25_contig00020602
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00020602
(1986 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR16456.1| unknown [Picea sitchensis] 253 9e-78
gb|EOY08857.1| Pentatricopeptide repeat-containing protein isofo... 191 1e-60
gb|EOY08858.1| Pentatricopeptide repeat-containing protein isofo... 191 1e-60
ref|XP_003535844.1| PREDICTED: pentatricopeptide repeat-containi... 191 2e-60
ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containi... 188 7e-60
gb|EXC46728.1| hypothetical protein L484_002071 [Morus notabilis] 190 6e-59
ref|XP_004303594.1| PREDICTED: pentatricopeptide repeat-containi... 185 8e-59
gb|AAD39676.1|AC007591_41 F9L1.43 [Arabidopsis thaliana] 186 8e-59
ref|NP_173001.2| pentatricopeptide repeat-containing protein [Ar... 186 8e-59
ref|XP_002890106.1| DNA binding protein [Arabidopsis lyrata subs... 184 1e-58
ref|XP_006348039.1| PREDICTED: pentatricopeptide repeat-containi... 178 6e-58
gb|ESW34082.1| hypothetical protein PHAVU_001G122900g [Phaseolus... 181 6e-58
ref|NP_001147602.1| DNA-binding protein [Zea mays] gi|195612448|... 182 1e-57
ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containi... 182 1e-57
ref|XP_004252011.1| PREDICTED: pentatricopeptide repeat-containi... 180 2e-57
ref|XP_006307055.1| hypothetical protein CARUB_v10008643mg [Caps... 179 2e-57
ref|XP_002308888.2| hypothetical protein POPTR_0006s03790g [Popu... 181 2e-57
ref|XP_006644067.1| PREDICTED: pentatricopeptide repeat-containi... 176 2e-57
gb|AFW79512.1| DNA-binding protein [Zea mays] 182 3e-57
gb|ADN33879.1| DNA-binding protein [Cucumis melo subsp. melo] 189 5e-57
>gb|ABR16456.1| unknown [Picea sitchensis]
Length = 600
Score = 253 bits (645), Expect(2) = 9e-78
Identities = 145/359 (40%), Positives = 207/359 (57%), Gaps = 2/359 (0%)
Frame = +2
Query: 410 NKVPMWEVCVGSNHFDVIRALEQWLSQGNVVNRPEVVATXXXXXXXXXXXXAVNISSWIL 589
N P+++ + D+ +LEQWL+ GNV+ R EVV T + +S W+
Sbjct: 130 NASPLYQTVLSCKFIDLPSSLEQWLADGNVLTRREVVITFVHLRNRRMFKRLLKVSDWLE 189
Query: 590 KKSFFEFDESYYASHLDCLFKGYGALQAERYFANTIPSSMKGIAAHRILLTNYAVRKNAI 769
K F+ E YAS LD + K G + E+YFA+ IPS M+G A+ LL NY+ N
Sbjct: 190 GKKPFKKTERDYASRLDVITKILGIFKGEKYFAS-IPSDMRGQRAYGTLLANYSSTCNVE 248
Query: 770 AAQNLFWKMKELGFKLDVSDYNFVLLVYQRCHRDDVPKILKLMDDENIKPNEMTYKILIA 949
A+ +F KMK GF L +YN +LL+Y+R + + +LK+M+DE +KP TYKILI
Sbjct: 249 KAEEIFKKMKAEGFSLTAFEYNQLLLLYKRLDKKKIQDVLKMMEDEGVKPTIFTYKILID 308
Query: 950 YKSSIGDTLGMEEIVE--KTKDLKDHADILLKLAREYIRSAMEEKAETTLIDFEKNMEPD 1123
K +GD GME++ E K++D++ + L LAR YIR+ + EKAE L + E D
Sbjct: 309 VKGWMGDIGGMEQVAENMKSEDIEMDSGTLELLARHYIRAGLAEKAEVVLKELENVSLKD 368
Query: 1124 KETPGQKHYIFRKLVWLYSLLGKENDVQRYWKELMLVGDLYLKDYVAGILAWGKLGNIIM 1303
K + + L+ LY+ LGK +V+R WK+ L L +Y G++AWGKLG I
Sbjct: 369 KRSR------LKMLLPLYAELGKPTEVERIWKDFEAFPALRLDEYATGVVAWGKLGQIEK 422
Query: 1304 SEHLFESMLQSKHKILAKHYNSLLHVYASHGLLHKAEDLVMRMSSNGVSVNRSIRSSLI 1480
+E FE +L S K+ AKHYN+LL+VYA H LL K ++LV RMS NG ++ I +LI
Sbjct: 423 AEITFEKLLNSGKKLSAKHYNALLNVYADHHLLLKGKELVKRMSDNGCTIEPPIWDALI 481
Score = 67.0 bits (162), Expect(2) = 9e-78
Identities = 26/83 (31%), Positives = 55/83 (66%)
Frame = +1
Query: 1510 KMKPAFQTMLAVLKKYVEKGEIDNAERVFDKMRRMGYKRRTPMYKHLIRAYLDANAASYR 1689
+++P + TM+ +L+KY E+G++ NAE++FD+MR+ GY + L+++Y +A +Y
Sbjct: 505 QLRPKYWTMVTILEKYAERGDVANAEKIFDRMRQAGYTGSAGAFASLLKSYANARVPAYG 564
Query: 1690 LRLKMRADRFIPDRNICELLQKL 1758
R +M+AD+ + + L++++
Sbjct: 565 FRERMKADKIYLNGRLNSLMEQV 587
>gb|EOY08857.1| Pentatricopeptide repeat-containing protein isoform 1 [Theobroma
cacao]
Length = 623
Score = 191 bits (486), Expect(2) = 1e-60
Identities = 120/346 (34%), Positives = 185/346 (53%), Gaps = 2/346 (0%)
Frame = +2
Query: 422 MWEVCVGSNHFDVIRALEQWLSQGNVVNRPEVVATXXXXXXXXXXXXAVNISSWILKKSF 601
+++ + + V + L++WL +G NR E+ A+ +S W+
Sbjct: 159 LFKAVIAAPGLSVHKVLDKWLEEGKAFNRTEISVAMLNLRKRRMYGRALQLSEWLEANKQ 218
Query: 602 FEFDESYYASHLDCLFKGYGALQAERYFANTIPSSMKGIAAHRILLTNYAVRKNAIAAQN 781
+F E YAS LD + K G L+AE Y IP S +G +R LL N V N A+
Sbjct: 219 LDFTERDYASRLDLIAKVRGLLKAEMYIEK-IPKSFRGEVIYRTLLANCVVANNVKKAEE 277
Query: 782 LFWKMKELGFKLDVSDYNFVLLVYQRCHRDDVPKILKLMDDENIKPNEMTYKILIAYKSS 961
+F KM++L + N +LL+Y+R + + +L LM+ EN+KP+ TYKILI K
Sbjct: 278 VFNKMRDLELPITSFSCNQLLLLYKRLDKKKIADVLLLMEKENVKPSLFTYKILIDTKGL 337
Query: 962 IGDTLGMEEIVEKTKDLKDHADILLK--LAREYIRSAMEEKAETTLIDFEKNMEPDKETP 1135
D GM++IVE K DI + LA+ Y+ + EKA ++ K ME D
Sbjct: 338 SNDITGMDQIVETMKAEGVEPDIHTQSILAKHYVSGGLTEKA----VEVLKGMEGDNIK- 392
Query: 1136 GQKHYIFRKLVWLYSLLGKENDVQRYWKELMLVGDLYLKDYVAGILAWGKLGNIIMSEHL 1315
+ + R L+ LY+ LGK +V+R WK + + L++Y+A I AWGKL I +E +
Sbjct: 393 -ENRWACRFLLPLYADLGKAVEVERVWK--VCESNPRLEEYMAAIEAWGKLNKIEEAEAV 449
Query: 1316 FESMLQSKHKILAKHYNSLLHVYASHGLLHKAEDLVMRMSSNGVSV 1453
FE ML++ K+ A++Y SLL VY++H +L K +DLV RM+ +G +
Sbjct: 450 FEMMLKTWKKLPARYYASLLKVYSNHKMLQKGKDLVKRMADDGCQI 495
Score = 70.9 bits (172), Expect(2) = 1e-60
Identities = 29/90 (32%), Positives = 62/90 (68%)
Frame = +1
Query: 1507 SKMKPAFQTMLAVLKKYVEKGEIDNAERVFDKMRRMGYKRRTPMYKHLIRAYLDANAASY 1686
+++KP F + +AV+++Y ++G+I N+E++F +MR+ GY R ++ L++AY++A A +Y
Sbjct: 527 NQVKPMFSSFMAVMEQYSKRGDIHNSEKMFHRMRQAGYMARLRQFQSLVQAYVNAKAPAY 586
Query: 1687 RLRLKMRADRFIPDRNICELLQKLAP*KKS 1776
+R +M+AD P++ + L ++ +K+
Sbjct: 587 GIRERMKADNIFPNKALATQLAQVDAFRKN 616
>gb|EOY08858.1| Pentatricopeptide repeat-containing protein isoform 2, partial
[Theobroma cacao]
Length = 621
Score = 191 bits (486), Expect(2) = 1e-60
Identities = 120/346 (34%), Positives = 185/346 (53%), Gaps = 2/346 (0%)
Frame = +2
Query: 422 MWEVCVGSNHFDVIRALEQWLSQGNVVNRPEVVATXXXXXXXXXXXXAVNISSWILKKSF 601
+++ + + V + L++WL +G NR E+ A+ +S W+
Sbjct: 157 LFKAVIAAPGLSVHKVLDKWLEEGKAFNRTEISVAMLNLRKRRMYGRALQLSEWLEANKQ 216
Query: 602 FEFDESYYASHLDCLFKGYGALQAERYFANTIPSSMKGIAAHRILLTNYAVRKNAIAAQN 781
+F E YAS LD + K G L+AE Y IP S +G +R LL N V N A+
Sbjct: 217 LDFTERDYASRLDLIAKVRGLLKAEMYIEK-IPKSFRGEVIYRTLLANCVVANNVKKAEE 275
Query: 782 LFWKMKELGFKLDVSDYNFVLLVYQRCHRDDVPKILKLMDDENIKPNEMTYKILIAYKSS 961
+F KM++L + N +LL+Y+R + + +L LM+ EN+KP+ TYKILI K
Sbjct: 276 VFNKMRDLELPITSFSCNQLLLLYKRLDKKKIADVLLLMEKENVKPSLFTYKILIDTKGL 335
Query: 962 IGDTLGMEEIVEKTKDLKDHADILLK--LAREYIRSAMEEKAETTLIDFEKNMEPDKETP 1135
D GM++IVE K DI + LA+ Y+ + EKA ++ K ME D
Sbjct: 336 SNDITGMDQIVETMKAEGVEPDIHTQSILAKHYVSGGLTEKA----VEVLKGMEGDNIK- 390
Query: 1136 GQKHYIFRKLVWLYSLLGKENDVQRYWKELMLVGDLYLKDYVAGILAWGKLGNIIMSEHL 1315
+ + R L+ LY+ LGK +V+R WK + + L++Y+A I AWGKL I +E +
Sbjct: 391 -ENRWACRFLLPLYADLGKAVEVERVWK--VCESNPRLEEYMAAIEAWGKLNKIEEAEAV 447
Query: 1316 FESMLQSKHKILAKHYNSLLHVYASHGLLHKAEDLVMRMSSNGVSV 1453
FE ML++ K+ A++Y SLL VY++H +L K +DLV RM+ +G +
Sbjct: 448 FEMMLKTWKKLPARYYASLLKVYSNHKMLQKGKDLVKRMADDGCQI 493
Score = 70.9 bits (172), Expect(2) = 1e-60
Identities = 29/90 (32%), Positives = 62/90 (68%)
Frame = +1
Query: 1507 SKMKPAFQTMLAVLKKYVEKGEIDNAERVFDKMRRMGYKRRTPMYKHLIRAYLDANAASY 1686
+++KP F + +AV+++Y ++G+I N+E++F +MR+ GY R ++ L++AY++A A +Y
Sbjct: 525 NQVKPMFSSFMAVMEQYSKRGDIHNSEKMFHRMRQAGYMARLRQFQSLVQAYVNAKAPAY 584
Query: 1687 RLRLKMRADRFIPDRNICELLQKLAP*KKS 1776
+R +M+AD P++ + L ++ +K+
Sbjct: 585 GIRERMKADNIFPNKALATQLAQVDAFRKN 614
>ref|XP_003535844.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Glycine max]
Length = 600
Score = 191 bits (485), Expect(2) = 2e-60
Identities = 121/359 (33%), Positives = 197/359 (54%), Gaps = 3/359 (0%)
Frame = +2
Query: 413 KVPMWEVCVGSNHFDVIRALEQWLSQGNVVNRPEVVATXXXXXXXXXXXXAVNISSWILK 592
++ +++V + + V AL +W QG ++R E+ A + W+
Sbjct: 134 QLKLFKVILNAPGLSVDSALSKWAGQGKELSRKEIFLAVRELRRRKMYGRAFQLFQWLES 193
Query: 593 KSFFEFDESYYASHLDCLFKGYGALQAERYFANTIPSSMKGIAAHRILLTNYAVRKNAIA 772
EF ES YAS LD + K G QAE+Y ++P S +G +R LL N A + N IA
Sbjct: 194 NKKLEFMESDYASQLDLIAKLRGLPQAEKYI-ESVPESFRGELLYRTLLANCASQNNLIA 252
Query: 773 AQNLFWKMKELGFKLDVSDYNFVLLVYQRCHRDDVPKILKLMDDENIKPNEMTYKILIAY 952
++ +F KMK+L L V N +LL+Y++ + + +L LM+ EN+KP+ TY+ILI
Sbjct: 253 SEKIFNKMKDLDLPLTVFACNQLLLLYKKLDKKKIADVLLLMEKENVKPSLFTYRILIDS 312
Query: 953 KSSIGDTLGMEEIVEKTKDLKDHADILLK--LAREYIRSAMEEKAETTLIDFE-KNMEPD 1123
K D GME++ E K+ DI L+ LAR Y + ++EKAE L + E +N+E
Sbjct: 313 KGHSNDIAGMEQVFETMKEEGFEPDIQLQALLARHYTSAGLKEKAEAILKEIEGENLE-- 370
Query: 1124 KETPGQKHYIFRKLVWLYSLLGKENDVQRYWKELMLVGDLYLKDYVAGILAWGKLGNIIM 1303
+K ++ L+ LY+ LGK ++V+R WK + + D +A + AWGKL I
Sbjct: 371 -----EKQWVCATLLRLYANLGKADEVERIWK--VCESKPRVDDCLAAVEAWGKLEKIEE 423
Query: 1304 SEHLFESMLQSKHKILAKHYNSLLHVYASHGLLHKAEDLVMRMSSNGVSVNRSIRSSLI 1480
+E +FE M K K+ +K+Y+ LL +YA++ +L K +DL+ RM+ +G+ + ++L+
Sbjct: 424 AEAVFE-MASKKWKLNSKNYSILLKIYANNKMLAKGKDLIKRMADSGLRIGPLTWNALV 481
Score = 70.9 bits (172), Expect(2) = 2e-60
Identities = 29/81 (35%), Positives = 55/81 (67%)
Frame = +1
Query: 1507 SKMKPAFQTMLAVLKKYVEKGEIDNAERVFDKMRRMGYKRRTPMYKHLIRAYLDANAASY 1686
S+++P F T L +L++Y ++G++ N+E++F KMR+ GY R +K L++AY++A +Y
Sbjct: 504 SQLQPMFTTYLDILEQYAKRGDVHNSEKIFLKMRQAGYTSRISQFKVLMQAYVNAKVPAY 563
Query: 1687 RLRLKMRADRFIPDRNICELL 1749
+R +M+AD P++ + L
Sbjct: 564 GIRERMKADNLFPNKTLANQL 584
>ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Brachypodium distachyon]
Length = 612
Score = 188 bits (477), Expect(2) = 7e-60
Identities = 111/361 (30%), Positives = 200/361 (55%), Gaps = 2/361 (0%)
Frame = +2
Query: 404 KKNKVPMWEVCVGSNHFDVIRALEQWLSQGNVVNRPEVVATXXXXXXXXXXXXAVNISSW 583
K ++ P+ +V + + DV L++W++ GN V+R +V A+ + W
Sbjct: 142 KISQCPLLKVMLEAPWNDVSGTLKKWVNDGNTVDRSDVFFAVLNLRRRRFFSKALQLLEW 201
Query: 584 ILKKSFFEFDESYYASHLDCLFKGYGALQAERYFANTIPSSMKGIAAHRILLTNYAVRKN 763
+ + E E YAS LD + K +G +AE++ N IP+S++G +R LL N N
Sbjct: 202 LEESKLIELVERDYASRLDLMAKVHGIYKAEKFIDN-IPASLRGEIVYRTLLANCVAEVN 260
Query: 764 AIAAQNLFWKMKELGFKLDVSDYNFVLLVYQRCHRDDVPKILKLMDDENIKPNEMTYKIL 943
A+ +F KMK+LGF + V N +LL+Y+R + + +L +M+ E++KP+ TYK+L
Sbjct: 261 VKKAEEVFNKMKDLGFPVTVFAINQLLLLYKRVDKKKISDVLTMMEKEDVKPSLFTYKLL 320
Query: 944 IAYKSSIGDTLGMEEIVEKTKDLKDHADILLK--LAREYIRSAMEEKAETTLIDFEKNME 1117
+ K + D GME++V+ + D+LL+ +A+ YI EKAE L E +M+
Sbjct: 321 VDTKGASRDIEGMEKVVQSMEAEGITPDLLLQATIAKHYIFGGHREKAEAILESMEGDMK 380
Query: 1118 PDKETPGQKHYIFRKLVWLYSLLGKENDVQRYWKELMLVGDLYLKDYVAGILAWGKLGNI 1297
++ + ++ LY+ LGK++DV+R WK + + L + ++ I A+G+LG++
Sbjct: 381 ENRNA-------CKMVMPLYAFLGKKDDVERIWK--VCQSNTRLDECLSAIEAFGRLGDV 431
Query: 1298 IMSEHLFESMLQSKHKILAKHYNSLLHVYASHGLLHKAEDLVMRMSSNGVSVNRSIRSSL 1477
+E +F +M ++ + +K+YN+++ VYA+ L+ K ++L RM +G + S SL
Sbjct: 432 EKAEEVFGNMFKTWKTLSSKYYNAMMRVYANQNLMDKGKELAKRMEEDGCRLGISTLDSL 491
Query: 1478 I 1480
+
Sbjct: 492 V 492
Score = 72.0 bits (175), Expect(2) = 7e-60
Identities = 36/89 (40%), Positives = 52/89 (58%)
Frame = +1
Query: 1507 SKMKPAFQTMLAVLKKYVEKGEIDNAERVFDKMRRMGYKRRTPMYKHLIRAYLDANAASY 1686
+KMKP + + L +L Y + G++ N+E+VF K+R+MGY R Y+ L+ AYL A A Y
Sbjct: 515 NKMKPQYSSYLMLLDSYSKIGDVHNSEKVFSKLRQMGYNGRIRQYQLLLHAYLHAKAPVY 574
Query: 1687 RLRLKMRADRFIPDRNICELLQKLAP*KK 1773
R +M+AD P+ I LL P K
Sbjct: 575 GFRERMKADNIFPNSVIASLLAATDPFNK 603
>gb|EXC46728.1| hypothetical protein L484_002071 [Morus notabilis]
Length = 623
Score = 190 bits (482), Expect(2) = 6e-59
Identities = 119/341 (34%), Positives = 182/341 (53%), Gaps = 2/341 (0%)
Frame = +2
Query: 464 RALEQWLSQGNVVNRPEVVATXXXXXXXXXXXXAVNISSWILKKSFFEFDESYYASHLDC 643
+AL++W+ +GN ++R ++ A+ S W+ + E E YAS +D
Sbjct: 173 KALDEWVKEGNDLSRGVILFVIRKLRKYRMYGKALQFSEWLESRKKLELVERDYASRVDL 232
Query: 644 LFKGYGALQAERYFANTIPSSMKGIAAHRILLTNYAVRKNAIAAQNLFWKMKELGFKLDV 823
+ K YG +AE+ F IP S+KG +R LL N N+ A+ +F K+K+L L
Sbjct: 233 IAKVYGPQRAEK-FIEKIPKSLKGELVYRTLLANCVQANNSKKAEEVFNKIKDLELPLTS 291
Query: 824 SDYNFVLLVYQRCHRDDVPKILKLMDDENIKPNEMTYKILIAYKSSIGDTLGMEEIVE-- 997
N +LL+Y+R R + +L LM+ EN+KP MTY+ILI K D GME I+E
Sbjct: 292 FTCNQLLLLYKRTDRKKIADVLLLMEKENVKPCLMTYRILIDVKGQSNDITGMEHILETM 351
Query: 998 KTKDLKDHADILLKLAREYIRSAMEEKAETTLIDFEKNMEPDKETPGQKHYIFRKLVWLY 1177
K + ++ LAR Y + ++EKAE L K ME D K + R L+ LY
Sbjct: 352 KAEGIETDTHTKAVLARNYAIAGLKEKAEAVL----KEMEGDNLNEDPK--VRRYLLLLY 405
Query: 1178 SLLGKENDVQRYWKELMLVGDLYLKDYVAGILAWGKLGNIIMSEHLFESMLQSKHKILAK 1357
+ LG ++V+R WK + +++A I AWGKL + +E FE ML++ K A
Sbjct: 406 AELGHADEVERVWK--ACESNPRTSEFLAAIEAWGKLKKVKKAEDAFEKMLKAVKKPSAV 463
Query: 1358 HYNSLLHVYASHGLLHKAEDLVMRMSSNGVSVNRSIRSSLI 1480
HYN+LL VYA+H +L + +DL+ RM+ N ++R S++
Sbjct: 464 HYNALLRVYANHKMLTRGKDLIKRMAENDGKISRMTLDSVV 504
Score = 67.0 bits (162), Expect(2) = 6e-59
Identities = 29/97 (29%), Positives = 62/97 (63%)
Frame = +1
Query: 1507 SKMKPAFQTMLAVLKKYVEKGEIDNAERVFDKMRRMGYKRRTPMYKHLIRAYLDANAASY 1686
+++KP + + +A++ +Y +KG+I N E++F +M++ GY R ++ LI+AY++A +Y
Sbjct: 527 NQLKPLYVSYMAIMDEYAKKGDIHNTEKMFLRMKQAGYDARFRQFQALIQAYVNAKTPAY 586
Query: 1687 RLRLKMRADRFIPDRNICELLQKLAP*KKSLKRQQLN 1797
+R +M+AD P+R + L ++ +K+ + L+
Sbjct: 587 GIRERMKADNIFPNRALAAQLTQVDAFRKTAASELLD 623
>ref|XP_004303594.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 625
Score = 185 bits (470), Expect(2) = 8e-59
Identities = 116/346 (33%), Positives = 181/346 (52%), Gaps = 3/346 (0%)
Frame = +2
Query: 452 FDVIRALEQWLSQGNVVNRPEVVATXXXXXXXXXXXXAVNISSWILKKSFFEFDESYYAS 631
F V AL++W+ +GN ++R E+ T A+ +S W+ EF E YAS
Sbjct: 171 FSVHSALDKWVKEGNDLSRAEISLTKINLRRRRMFGRALQLSEWLEAHKQIEFSERDYAS 230
Query: 632 HLDCLFKGYGALQAERYFANTIPSSMKGIAAHRILLTNYAVRKNAIAAQNLFWKMKELGF 811
LD + K YG +AE+Y IP S +G +R LL N N A+ +F KMK+L F
Sbjct: 231 RLDLIAKVYGLWKAEKY-VEMIPQSFRGEKIYRTLLVNCVGANNLKKAEEIFNKMKDLEF 289
Query: 812 KLDVSDYNFVLLVYQRCHRDDVPKILKLMDDENIKPNEMTYKILIAYKSSIGDTLGMEEI 991
N +LL+Y+R + + +L M+ EN+KP TYK+LIA K D GME++
Sbjct: 290 PFTSFTCNQLLLLYKRLDKKKIADVLLFMEKENVKPTAFTYKLLIATKGESNDIAGMEQV 349
Query: 992 VEKTKDLKDHADILLK--LAREYIRSAMEEKAETTLIDFE-KNMEPDKETPGQKHYIFRK 1162
K DI +K +A+ Y ++EKAE L + E N++ + + R
Sbjct: 350 YGTMKSEGIEPDITVKAVMAKHYASGGLKEKAEAVLKEMEGGNLK-------ENRWACRA 402
Query: 1163 LVWLYSLLGKENDVQRYWKELMLVGDLYLKDYVAGILAWGKLGNIIMSEHLFESMLQSKH 1342
L+ LY+ LG+ ++V R W M ++++ +A I AWGKL I +E +F+ ML++
Sbjct: 403 LLPLYAELGQVDEVGRVWNVCM--PKPWVEECMAAIEAWGKLNKIEEAEAVFDKMLKTWK 460
Query: 1343 KILAKHYNSLLHVYASHGLLHKAEDLVMRMSSNGVSVNRSIRSSLI 1480
++ ++ Y LL VY +H ++ K +DLV RM N V+ I +L+
Sbjct: 461 RLSSRQYAVLLQVYTNHKMIEKGKDLVKRMVDNNCEVDPLIWDALV 506
Score = 71.2 bits (173), Expect(2) = 8e-59
Identities = 31/87 (35%), Positives = 59/87 (67%)
Frame = +1
Query: 1516 KPAFQTMLAVLKKYVEKGEIDNAERVFDKMRRMGYKRRTPMYKHLIRAYLDANAASYRLR 1695
KP F + +A++ +Y ++G+I N+E++F +MRR GY R ++ L++AY++A A +Y L
Sbjct: 532 KPMFSSYMALMDQYSKRGDIHNSEKIFYRMRRDGYTARLRQFQSLVQAYINAKAPAYGLW 591
Query: 1696 LKMRADRFIPDRNICELLQKLAP*KKS 1776
+M++D F P++ + L ++ P KK+
Sbjct: 592 ERMKSDNFFPNKALLGQLSQVDPFKKT 618
>gb|AAD39676.1|AC007591_41 F9L1.43 [Arabidopsis thaliana]
Length = 623
Score = 186 bits (472), Expect(2) = 8e-59
Identities = 113/351 (32%), Positives = 186/351 (52%), Gaps = 2/351 (0%)
Frame = +2
Query: 407 KNKVPMWEVCVGSNHFDVIRALEQWLSQGNVVNRPEVVATXXXXXXXXXXXXAVNISSWI 586
K M++ V + V AL++W+ QG NR E + A+ ++ W+
Sbjct: 154 KRPSEMFKAIVSVSGLSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWL 213
Query: 587 LKKSFFEFDESYYASHLDCLFKGYGALQAERYFANTIPSSMKGIAAHRILLTNYAVRKNA 766
+ FE +E YA LD + K G + E Y TIP S +G +R LL N+ N
Sbjct: 214 DENKQFEMEERDYACRLDLISKVRGWYKGEAYI-KTIPESFRGELVYRTLLANHVATSNV 272
Query: 767 IAAQNLFWKMKELGFKLDVSDYNFVLLVYQRCHRDDVPKILKLMDDENIKPNEMTYKILI 946
A+ +F KMK+LGF L N +L++Y+R + + +L L++ EN+KPN TYKILI
Sbjct: 273 RTAEAVFNKMKDLGFPLSTFTCNQMLILYKRVDKKKIADVLLLLEKENLKPNLNTYKILI 332
Query: 947 AYKSSIGDTLGMEEIVEKTKDLKDHADILLK--LAREYIRSAMEEKAETTLIDFEKNMEP 1120
K S D GME+IVE K D+ + +AR Y + ++EKAE L E
Sbjct: 333 DTKGSSNDITGMEQIVETMKSEGVELDLRARALIARHYASAGLKEKAEKVL------KEM 386
Query: 1121 DKETPGQKHYIFRKLVWLYSLLGKENDVQRYWKELMLVGDLYLKDYVAGILAWGKLGNII 1300
+ E+ + ++ + L+ +Y L +E++V+R WK + + + +A ILA+GK+ +
Sbjct: 387 EGESLEENRHMCKDLLSVYGYLQREDEVRRVWK--ICEENPRYNEVLAAILAFGKIDKVK 444
Query: 1301 MSEHLFESMLQSKHKILAKHYNSLLHVYASHGLLHKAEDLVMRMSSNGVSV 1453
+E +FE +L+ H++ + Y+ LL VY H ++ + +DLV +MS +G ++
Sbjct: 445 DAEAVFEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNI 495
Score = 70.5 bits (171), Expect(2) = 8e-59
Identities = 29/89 (32%), Positives = 58/89 (65%)
Frame = +1
Query: 1510 KMKPAFQTMLAVLKKYVEKGEIDNAERVFDKMRRMGYKRRTPMYKHLIRAYLDANAASYR 1689
++KP + + ++ +YV +G++ N E++F +M++ GY+ R Y+ LI+AY++A A +Y
Sbjct: 528 QIKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRFWAYQTLIQAYVNAKAPAYG 587
Query: 1690 LRLKMRADRFIPDRNICELLQKLAP*KKS 1776
++ +M+AD P++ + L K P KK+
Sbjct: 588 MKERMKADNIFPNKRLAAQLAKADPFKKT 616
>ref|NP_173001.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806396|sp|Q9XI21.2|PPR44_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g15480, mitochondrial; Flags: Precursor
gi|332191207|gb|AEE29328.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 594
Score = 186 bits (472), Expect(2) = 8e-59
Identities = 113/351 (32%), Positives = 186/351 (52%), Gaps = 2/351 (0%)
Frame = +2
Query: 407 KNKVPMWEVCVGSNHFDVIRALEQWLSQGNVVNRPEVVATXXXXXXXXXXXXAVNISSWI 586
K M++ V + V AL++W+ QG NR E + A+ ++ W+
Sbjct: 125 KRPSEMFKAIVSVSGLSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWL 184
Query: 587 LKKSFFEFDESYYASHLDCLFKGYGALQAERYFANTIPSSMKGIAAHRILLTNYAVRKNA 766
+ FE +E YA LD + K G + E Y TIP S +G +R LL N+ N
Sbjct: 185 DENKQFEMEERDYACRLDLISKVRGWYKGEAYI-KTIPESFRGELVYRTLLANHVATSNV 243
Query: 767 IAAQNLFWKMKELGFKLDVSDYNFVLLVYQRCHRDDVPKILKLMDDENIKPNEMTYKILI 946
A+ +F KMK+LGF L N +L++Y+R + + +L L++ EN+KPN TYKILI
Sbjct: 244 RTAEAVFNKMKDLGFPLSTFTCNQMLILYKRVDKKKIADVLLLLEKENLKPNLNTYKILI 303
Query: 947 AYKSSIGDTLGMEEIVEKTKDLKDHADILLK--LAREYIRSAMEEKAETTLIDFEKNMEP 1120
K S D GME+IVE K D+ + +AR Y + ++EKAE L E
Sbjct: 304 DTKGSSNDITGMEQIVETMKSEGVELDLRARALIARHYASAGLKEKAEKVL------KEM 357
Query: 1121 DKETPGQKHYIFRKLVWLYSLLGKENDVQRYWKELMLVGDLYLKDYVAGILAWGKLGNII 1300
+ E+ + ++ + L+ +Y L +E++V+R WK + + + +A ILA+GK+ +
Sbjct: 358 EGESLEENRHMCKDLLSVYGYLQREDEVRRVWK--ICEENPRYNEVLAAILAFGKIDKVK 415
Query: 1301 MSEHLFESMLQSKHKILAKHYNSLLHVYASHGLLHKAEDLVMRMSSNGVSV 1453
+E +FE +L+ H++ + Y+ LL VY H ++ + +DLV +MS +G ++
Sbjct: 416 DAEAVFEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNI 466
Score = 70.5 bits (171), Expect(2) = 8e-59
Identities = 29/89 (32%), Positives = 58/89 (65%)
Frame = +1
Query: 1510 KMKPAFQTMLAVLKKYVEKGEIDNAERVFDKMRRMGYKRRTPMYKHLIRAYLDANAASYR 1689
++KP + + ++ +YV +G++ N E++F +M++ GY+ R Y+ LI+AY++A A +Y
Sbjct: 499 QIKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRFWAYQTLIQAYVNAKAPAYG 558
Query: 1690 LRLKMRADRFIPDRNICELLQKLAP*KKS 1776
++ +M+AD P++ + L K P KK+
Sbjct: 559 MKERMKADNIFPNKRLAAQLAKADPFKKT 587
>ref|XP_002890106.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335948|gb|EFH66365.1| DNA binding protein
[Arabidopsis lyrata subsp. lyrata]
Length = 594
Score = 184 bits (467), Expect(2) = 1e-58
Identities = 112/351 (31%), Positives = 182/351 (51%), Gaps = 2/351 (0%)
Frame = +2
Query: 407 KNKVPMWEVCVGSNHFDVIRALEQWLSQGNVVNRPEVVATXXXXXXXXXXXXAVNISSWI 586
K +++ V + V AL++W+ QG +R E + A+ ++ W+
Sbjct: 125 KRPSELFKAIVSVSGLSVGSALDKWVEQGKDTSRTEFASAMLQLRKRRMYGRALQMTEWL 184
Query: 587 LKKSFFEFDESYYASHLDCLFKGYGALQAERYFANTIPSSMKGIAAHRILLTNYAVRKNA 766
FE E YAS LD + K G + E Y TIP S +G +R LL+NY N
Sbjct: 185 DDNKQFEMKERDYASRLDLISKVRGLYKGEAYI-ETIPESFRGELVYRTLLSNYVATSNV 243
Query: 767 IAAQNLFWKMKELGFKLDVSDYNFVLLVYQRCHRDDVPKILKLMDDENIKPNEMTYKILI 946
A+ +F KMK+LGF L N +L++Y+R + + +L LM+ EN+KPN TYKILI
Sbjct: 244 RTAEAVFNKMKDLGFPLSTFTCNQMLILYKRVDKKKIADVLLLMEKENLKPNLNTYKILI 303
Query: 947 AYKSSIGDTLGMEEIVEKTKDLKDHADILLK--LAREYIRSAMEEKAETTLIDFEKNMEP 1120
K D GME+IVE K D+ + +AR Y + ++EKAE L E
Sbjct: 304 DTKGLSNDITGMEQIVETMKSEGVEPDLRARALIARNYASAGLKEKAEKVL------KEM 357
Query: 1121 DKETPGQKHYIFRKLVWLYSLLGKENDVQRYWKELMLVGDLYLKDYVAGILAWGKLGNII 1300
+ E+ + ++++ L+ +Y L + ++V R WK + + +A ILA+GK+ +
Sbjct: 358 EGESLEENRHVYKDLLSVYGFLQRADEVTRIWK--ICEEKPRYNESLAAILAFGKIDKVK 415
Query: 1301 MSEHLFESMLQSKHKILAKHYNSLLHVYASHGLLHKAEDLVMRMSSNGVSV 1453
+E +FE ML+ H++ + Y+ LL VY H ++ + +DLV +M +G ++
Sbjct: 416 EAEAVFEKMLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMLDSGCNI 466
Score = 72.0 bits (175), Expect(2) = 1e-58
Identities = 30/89 (33%), Positives = 58/89 (65%)
Frame = +1
Query: 1510 KMKPAFQTMLAVLKKYVEKGEIDNAERVFDKMRRMGYKRRTPMYKHLIRAYLDANAASYR 1689
++KP + + V+ +YV +G++ N E++F +M++ GY+ R Y+ LI+AY++A A +Y
Sbjct: 499 QIKPLMSSFMYVMGEYVRRGDVHNTEKIFQRMKQFGYQSRFRTYQALIQAYVNAKAPAYG 558
Query: 1690 LRLKMRADRFIPDRNICELLQKLAP*KKS 1776
++ +M+AD P++ + L K P KK+
Sbjct: 559 MKDRMKADNIFPNKGLAAQLTKTDPFKKA 587
>ref|XP_006348039.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Solanum tuberosum]
Length = 624
Score = 178 bits (452), Expect(2) = 6e-58
Identities = 113/334 (33%), Positives = 176/334 (52%), Gaps = 2/334 (0%)
Frame = +2
Query: 458 VIRALEQWLSQGNVVNRPEVVATXXXXXXXXXXXXAVNISSWILKKSFFEFDESYYASHL 637
V + +++W+ +GN V R EV A A+ +S W+ K+ F + YAS +
Sbjct: 173 VSKIMDKWV-EGNNVTRVEVAAAMLNFRKRRMYGKALQLSEWLESKNQLTFIDRDYASRV 231
Query: 638 DCLFKGYGALQAERYFANTIPSSMKGIAAHRILLTNYAVRKNAIAAQNLFWKMKELGFKL 817
D + K G +AE Y TIP S + +R LL N + ++ +F KMK+L F L
Sbjct: 232 DLIAKVRGLKKAEDYIG-TIPESFRNEVIYRTLLANCVAEGDLKKSEQVFNKMKDLEFPL 290
Query: 818 DVSDYNFVLLVYQRCHRDDVPKILKLMDDENIKPNEMTYKILIAYKSSIGDTLGMEEIVE 997
YN +LL+Y++ + + +L LM+ EN+KP TY++LI K D GME+IVE
Sbjct: 291 TCFTYNQLLLLYKKTDKKKIADVLLLMEKENVKPTHFTYRLLIDVKGQFNDISGMEQIVE 350
Query: 998 KTKDLKDHADILLK--LAREYIRSAMEEKAETTLIDFEKNMEPDKETPGQKHYIFRKLVW 1171
K D+ K L + YI + EKAE L + E K T + R L+
Sbjct: 351 TMKAEGLEPDVTTKSILVKHYISGGLNEKAENVLKEMEGG--DTKST----RWACRSLLP 404
Query: 1172 LYSLLGKENDVQRYWKELMLVGDLYLKDYVAGILAWGKLGNIIMSEHLFESMLQSKHKIL 1351
Y+ LG+ ++V R W+ + + L++ VA + AWGKL NI +E +F+ M +
Sbjct: 405 HYAALGRADEVARIWQ--VCESNPRLEECVAAVDAWGKLHNIEEAEAIFDKMAAKWPTLS 462
Query: 1352 AKHYNSLLHVYASHGLLHKAEDLVMRMSSNGVSV 1453
+KHY+ LL++YA+H +L K +DLV RM+ +G +
Sbjct: 463 SKHYSVLLNIYANHKMLSKGKDLVKRMADSGCRI 496
Score = 75.1 bits (183), Expect(2) = 6e-58
Identities = 31/90 (34%), Positives = 58/90 (64%)
Frame = +1
Query: 1507 SKMKPAFQTMLAVLKKYVEKGEIDNAERVFDKMRRMGYKRRTPMYKHLIRAYLDANAASY 1686
++++P + L ++ +Y +KG+I N E++F +MR+ GY R Y+HLIRAY++A A Y
Sbjct: 528 NRLRPMINSYLMIMDQYAKKGDIHNTEKMFHRMRQAGYVSRATQYQHLIRAYINAKAPCY 587
Query: 1687 RLRLKMRADRFIPDRNICELLQKLAP*KKS 1776
+ +M+AD P++ + +L ++ KK+
Sbjct: 588 GIADRMKADNIFPNKGLANMLAQVDAFKKN 617
>gb|ESW34082.1| hypothetical protein PHAVU_001G122900g [Phaseolus vulgaris]
Length = 610
Score = 181 bits (458), Expect(2) = 6e-58
Identities = 116/331 (35%), Positives = 184/331 (55%), Gaps = 2/331 (0%)
Frame = +2
Query: 467 ALEQWLSQGNVVNRPEVVATXXXXXXXXXXXXAVNISSWILKKSFFEFDESYYASHLDCL 646
ALE+WL++GN + R EV A+ +S W+ K+ FEF E +A LD +
Sbjct: 162 ALEKWLAEGNELTREEVSHATFYLRRRKMFGRALQLSEWLESKNQFEFLERDHAVRLDLI 221
Query: 647 FKGYGALQAERYFANTIPSSMKGIAAHRILLTNYAVRKNAIAAQNLFWKMKELGFKLDVS 826
+ G +AE Y TIP S HR LL N + N A+ +F KMK L F + V
Sbjct: 222 ARTRGLHKAEVYI-ETIPESCSRELMHRTLLANCVSQNNVKKAEEVFNKMKNLDFSITVF 280
Query: 827 DYNFVLLVYQRCHRDDVPKILKLMDDENIKPNEMTYKILIAYKSSIGDTLGMEEIVEKTK 1006
N +LL+Y+R ++ + +L LM++ENIKP+ +TY ILI K D GM++I+++ K
Sbjct: 281 ACNQMLLLYKRNNKKKIADVLLLMENENIKPSSLTYSILIDTKGQSRDIDGMDQILDRMK 340
Query: 1007 DLKDHADILLK--LAREYIRSAMEEKAETTLIDFEKNMEPDKETPGQKHYIFRKLVWLYS 1180
DI + LAR YI + +++KAET L E + E + ++ + L+ LY+
Sbjct: 341 AQGIEPDINTQAVLARHYISAGLQDKAETLL------KEMEGENLNRNRWLCQILLPLYA 394
Query: 1181 LLGKENDVQRYWKELMLVGDLYLKDYVAGILAWGKLGNIIMSEHLFESMLQSKHKILAKH 1360
LGK ++V+R WK + + + + + I AWGKL + +E++FE+M++ K K+ ++
Sbjct: 395 NLGKVDEVERVWK--VCETNPWHDESLVAIEAWGKLNKVDEAENVFETMIK-KRKLSSRT 451
Query: 1361 YNSLLHVYASHGLLHKAEDLVMRMSSNGVSV 1453
+ LL VYA+H L K +DL+ RM +G +
Sbjct: 452 GSVLLKVYANHNKLIKGKDLIKRMGDSGCRI 482
Score = 72.8 bits (177), Expect(2) = 6e-58
Identities = 32/83 (38%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Frame = +1
Query: 1507 SKMKPAFQTMLAVLKKYVEKGEIDNAERVFDKMRRMGYKRRTPMYKHLIRAYLDANAASY 1686
S+MKP F T L +L++Y E+G+I N+E++F +M++ Y R MY+ L+ AY++A +Y
Sbjct: 514 SRMKPMFSTYLTILQQYAERGDIHNSEKIFYRMKQDDYPSRPRMYQLLLNAYINAKVPAY 573
Query: 1687 RLRLKMRADRFIPDRNIC-ELLQ 1752
+R ++RAD +P +++ +L+Q
Sbjct: 574 GIRDRLRADSILPTKSLAYQLIQ 596
>ref|NP_001147602.1| DNA-binding protein [Zea mays] gi|195612448|gb|ACG28054.1|
DNA-binding protein [Zea mays]
Length = 622
Score = 182 bits (462), Expect(2) = 1e-57
Identities = 116/343 (33%), Positives = 176/343 (51%), Gaps = 2/343 (0%)
Frame = +2
Query: 458 VIRALEQWLSQGNVVNRPEVVATXXXXXXXXXXXXAVNISSWILKKSFFEFDESYYASHL 637
V ALE+W GN +R E+ A+ + W+ K FEF E YA+HL
Sbjct: 169 VTSALEKWAKDGNAFDRGELYYVLLNLRKRHWYSKALELVEWVQKSQLFEFVERDYAAHL 228
Query: 638 DCLFKGYGALQAERYFANTIPSSMKGIAAHRILLTNYAVRKNAIAAQNLFWKMKELGFKL 817
D K YG +AE+ IP+S +G +R LL N N ++ +F +MK+LGF +
Sbjct: 229 DLTAKVYGLHKAEQTIEK-IPASCRGEIVYRTLLANCVSASNIKKSEQVFNRMKDLGFPV 287
Query: 818 DVSDYNFVLLVYQRCHRDDVPKILKLMDDENIKPNEMTYKILIAYKSSIGDTLGMEEIVE 997
+N +LL+Y+R R + +L +M+ E++KP+ TYKIL+ K S+GD ME+++E
Sbjct: 288 TQFSFNQLLLLYKRLDRKKIADVLAMMEKEDVKPSLFTYKILVDAKGSVGDIEAMEKVIE 347
Query: 998 KTKDLKDHADILLK--LAREYIRSAMEEKAETTLIDFEKNMEPDKETPGQKHYIFRKLVW 1171
+ D+ +AR YI EKAE L K ME D + + L+
Sbjct: 348 SMEKDSIEPDLTFNATIARHYIFYGQREKAEALL----KAMEGDDIQ--KNRAACKTLLP 401
Query: 1172 LYSLLGKENDVQRYWKELMLVGDLYLKDYVAGILAWGKLGNIIMSEHLFESMLQSKHKIL 1351
L++ LG + V+R WK + + + V+ I A+GKLG++ +E +FE ML +
Sbjct: 402 LHAFLGNSDAVERIWK--ACEDNTRVAESVSAIEAFGKLGDVEKAEKVFEDMLVHWKTLS 459
Query: 1352 AKHYNSLLHVYASHGLLHKAEDLVMRMSSNGVSVNRSIRSSLI 1480
+K YN+LL VYA H LL K ++L RM N V +L+
Sbjct: 460 SKFYNALLKVYADHNLLDKGKELAKRMDENRVRFGAPTLDALV 502
Score = 70.5 bits (171), Expect(2) = 1e-57
Identities = 31/84 (36%), Positives = 52/84 (61%)
Frame = +1
Query: 1513 MKPAFQTMLAVLKKYVEKGEIDNAERVFDKMRRMGYKRRTPMYKHLIRAYLDANAASYRL 1692
+KP + T + +L Y +KG++ N+E+VF+K+R+ GY R MY+ L+ AY+ A A +Y
Sbjct: 527 IKPIYNTYMTLLDSYSKKGDVRNSEKVFNKLRQSGYTGRIRMYQSLLHAYVHAKAPAYGF 586
Query: 1693 RLKMRADRFIPDRNICELLQKLAP 1764
R +M+AD P+ + L+ P
Sbjct: 587 RERMKADNIFPNSAVSTLIAATDP 610
>ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Glycine max]
Length = 609
Score = 182 bits (463), Expect(2) = 1e-57
Identities = 114/352 (32%), Positives = 188/352 (53%), Gaps = 2/352 (0%)
Frame = +2
Query: 404 KKNKVPMWEVCVGSNHFDVIRALEQWLSQGNVVNRPEVVATXXXXXXXXXXXXAVNISSW 583
++ + +++ + V AL +W+ G ++R E++ A + W
Sbjct: 140 RRTQSELFKAIANAPGLSVDSALNKWVEHGKELSRKEILLAVRELRRRKMYGRAFQLFQW 199
Query: 584 ILKKSFFEFDESYYASHLDCLFKGYGALQAERYFANTIPSSMKGIAAHRILLTNYAVRKN 763
+ EF ES YAS LD + K G +AE+Y ++P S +G +R LL N A + N
Sbjct: 200 LESNKKLEFMESDYASQLDLIAKLRGLPKAEKYI-ESVPESFRGELLYRTLLANCASQNN 258
Query: 764 AIAAQNLFWKMKELGFKLDVSDYNFVLLVYQRCHRDDVPKILKLMDDENIKPNEMTYKIL 943
IA + +F KMK+L L N +LL+Y++ + + +L LM+ EN+KP+ TY+IL
Sbjct: 259 LIATEKIFNKMKDLDLPLTAFACNQLLLLYKKLDKKKIADVLLLMEKENVKPSLFTYRIL 318
Query: 944 IAYKSSIGDTLGMEEIVEKTKDLKDHADILLK--LAREYIRSAMEEKAETTLIDFEKNME 1117
I K D GME++ E K+ DI ++ LAR Y S ++EKAE L E
Sbjct: 319 IDSKGQSNDIAGMEQVFETMKEEGFEPDIQIQALLARHYTSSGLKEKAEAML------KE 372
Query: 1118 PDKETPGQKHYIFRKLVWLYSLLGKENDVQRYWKELMLVGDLYLKDYVAGILAWGKLGNI 1297
+ E + ++ L+ LY+ LGK ++V+R WK + ++D +A + AWGKL I
Sbjct: 373 MEGENLKENQWVCATLLRLYANLGKADEVERIWK--VCESKPRVEDCLAAVEAWGKLNKI 430
Query: 1298 IMSEHLFESMLQSKHKILAKHYNSLLHVYASHGLLHKAEDLVMRMSSNGVSV 1453
+E +FE M+ K K+ +K+Y+ LL +YA++ +L K ++LV M+ +GV +
Sbjct: 431 EEAEAVFE-MVSKKWKLNSKNYSVLLKIYANNKMLTKGKELVKLMADSGVRI 481
Score = 70.1 bits (170), Expect(2) = 1e-57
Identities = 28/81 (34%), Positives = 56/81 (69%)
Frame = +1
Query: 1507 SKMKPAFQTMLAVLKKYVEKGEIDNAERVFDKMRRMGYKRRTPMYKHLIRAYLDANAASY 1686
++++P F T LA+L++Y ++G++ N+E++F KMR+ GY R ++ LI+AY++A +Y
Sbjct: 513 NQLQPMFTTYLAILEQYAKRGDVHNSEKIFLKMRQAGYTSRISQFQVLIQAYVNAKVPAY 572
Query: 1687 RLRLKMRADRFIPDRNICELL 1749
+R +++AD P++ + L
Sbjct: 573 GIRERIKADNLFPNKTLANQL 593
>ref|XP_004252011.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial [Solanum lycopersicum]
Length = 624
Score = 180 bits (456), Expect(2) = 2e-57
Identities = 114/334 (34%), Positives = 175/334 (52%), Gaps = 2/334 (0%)
Frame = +2
Query: 458 VIRALEQWLSQGNVVNRPEVVATXXXXXXXXXXXXAVNISSWILKKSFFEFDESYYASHL 637
V + +++W+ +GN V R EV + A+ +S W+ + F + YAS +
Sbjct: 173 VSKIMDKWV-EGNNVTRVEVASAMLNFRKRRMYGKALQLSEWLESSNQLTFIDRDYASRV 231
Query: 638 DCLFKGYGALQAERYFANTIPSSMKGIAAHRILLTNYAVRKNAIAAQNLFWKMKELGFKL 817
D + K G +AE Y TIP S + +R LL N + ++ +F KMK+L F L
Sbjct: 232 DLIAKVLGLKKAEDYIG-TIPESFRNEVIYRTLLANCVAEGDLKKSEQIFNKMKDLEFPL 290
Query: 818 DVSDYNFVLLVYQRCHRDDVPKILKLMDDENIKPNEMTYKILIAYKSSIGDTLGMEEIVE 997
YN +LL+Y++ + + +L LM+ EN+KP TY++LI K D GME+IVE
Sbjct: 291 TCFSYNQLLLLYKKTDKKKIADVLLLMEKENVKPTHFTYRLLIDVKGQFNDISGMEQIVE 350
Query: 998 KTKDLKDHADILLK--LAREYIRSAMEEKAETTLIDFEKNMEPDKETPGQKHYIFRKLVW 1171
K D+ K L + YI + EKAE L + E DK+ + R L+
Sbjct: 351 TMKAEGLEPDLTTKSILVKHYISGGLNEKAENVLKEMEGG---DKKA---TRWACRSLLP 404
Query: 1172 LYSLLGKENDVQRYWKELMLVGDLYLKDYVAGILAWGKLGNIIMSEHLFESMLQSKHKIL 1351
Y+ LG+ N+V R W + + L++ VA I AWGKL NI +E +FE M +
Sbjct: 405 HYAALGRANEVARIWH--VCESNPRLEECVAAIDAWGKLHNIKEAEAIFEKMAAKWPTLS 462
Query: 1352 AKHYNSLLHVYASHGLLHKAEDLVMRMSSNGVSV 1453
+KHY+ LL++YA+H +L K +DLV RM+ +G +
Sbjct: 463 SKHYSVLLNIYANHKMLSKGKDLVKRMADSGCRI 496
Score = 72.0 bits (175), Expect(2) = 2e-57
Identities = 30/90 (33%), Positives = 58/90 (64%)
Frame = +1
Query: 1507 SKMKPAFQTMLAVLKKYVEKGEIDNAERVFDKMRRMGYKRRTPMYKHLIRAYLDANAASY 1686
++++P + L ++ +Y +KG+I N E++F +MR+ GY R Y++LIRAY++A A Y
Sbjct: 528 NRLRPMIYSYLMIMDQYAKKGDIHNTEKMFHRMRQAGYVSRATQYQYLIRAYINAKAPCY 587
Query: 1687 RLRLKMRADRFIPDRNICELLQKLAP*KKS 1776
+ +M+AD P++ + +L ++ KK+
Sbjct: 588 GIADRMKADNIFPNKGLTNMLAQVDAFKKN 617
>ref|XP_006307055.1| hypothetical protein CARUB_v10008643mg [Capsella rubella]
gi|482575766|gb|EOA39953.1| hypothetical protein
CARUB_v10008643mg [Capsella rubella]
Length = 597
Score = 179 bits (455), Expect(2) = 2e-57
Identities = 107/346 (30%), Positives = 185/346 (53%), Gaps = 2/346 (0%)
Frame = +2
Query: 422 MWEVCVGSNHFDVIRALEQWLSQGNVVNRPEVVATXXXXXXXXXXXXAVNISSWILKKSF 601
+++ V + V AL++W+ +G +NR E+ A+ ++ W+ +
Sbjct: 133 LFKAIVSVSGVAVASALDKWIEEGKEINRTELANAMLELRKRRMYGRALQMTEWLDEHKQ 192
Query: 602 FEFDESYYASHLDCLFKGYGALQAERYFANTIPSSMKGIAAHRILLTNYAVRKNAIAAQN 781
FE +E YAS LD + K G + E Y IP S +G +R LL+NYA N +
Sbjct: 193 FELEERDYASRLDLISKVRGLYKGEVYIER-IPESFRGELVYRTLLSNYAATSNVRKTEE 251
Query: 782 LFWKMKELGFKLDVSDYNFVLLVYQRCHRDDVPKILKLMDDENIKPNEMTYKILIAYKSS 961
+F KM++LGF L + +L++Y+R ++ + +L LM+ EN+KP+ TYKILI K
Sbjct: 252 VFNKMRDLGFPLSTFACDQMLILYRRVNKKKIADVLLLMEKENLKPSLNTYKILIDIKGL 311
Query: 962 IGDTLGMEEIVEKTKDLKDHADILLK--LAREYIRSAMEEKAETTLIDFEKNMEPDKETP 1135
+ D GME+I+E K D+ + +AR Y + ++EKAE L E + E+
Sbjct: 312 MNDITGMEQILETMKSEGVELDLRAQSIIARNYASAGLKEKAEKVL------KEMEGESL 365
Query: 1136 GQKHYIFRKLVWLYSLLGKENDVQRYWKELMLVGDLYLKDYVAGILAWGKLGNIIMSEHL 1315
+ ++ + L+ +Y L + ++V R WK + + +A ILA+GK+ + +E +
Sbjct: 366 EENRHVCKDLLSIYGFLQRADEVTRIWK--ICEEKPRYNESLAAILAFGKIDKVKEAEAI 423
Query: 1316 FESMLQSKHKILAKHYNSLLHVYASHGLLHKAEDLVMRMSSNGVSV 1453
FE +L+ H++ + Y+ LL VY H ++ + +DLV +MS +G S+
Sbjct: 424 FEKILKMGHRVSSNVYSVLLKVYIDHKMVSEGKDLVKQMSDSGCSI 469
Score = 72.4 bits (176), Expect(2) = 2e-57
Identities = 30/89 (33%), Positives = 59/89 (66%)
Frame = +1
Query: 1510 KMKPAFQTMLAVLKKYVEKGEIDNAERVFDKMRRMGYKRRTPMYKHLIRAYLDANAASYR 1689
++KP + + V+ +YV++G++ N E++F++M++ GY+ R Y+ LI+AY++A A +Y
Sbjct: 502 QIKPLMSSFMHVMDEYVKRGDVHNTEKIFERMKQAGYQSRFRAYQALIQAYVNAKAPAYG 561
Query: 1690 LRLKMRADRFIPDRNICELLQKLAP*KKS 1776
+ +M+AD P++ + L K P KK+
Sbjct: 562 MNDRMKADNIFPNKGLAAQLAKADPFKKT 590
>ref|XP_002308888.2| hypothetical protein POPTR_0006s03790g [Populus trichocarpa]
gi|550335400|gb|EEE92411.2| hypothetical protein
POPTR_0006s03790g [Populus trichocarpa]
Length = 623
Score = 181 bits (460), Expect(2) = 2e-57
Identities = 119/356 (33%), Positives = 185/356 (51%), Gaps = 3/356 (0%)
Frame = +2
Query: 395 LAHKKNKVPMWEVCVGSNHFDVIRALEQWLSQGNVVNRPEVVATXXXXXXXXXXXXAVNI 574
L K+ ++ V ++ V L++W+++G ++R E+ A+ +
Sbjct: 150 LPRKRPTTELFNAIVSASDVSVQSVLDKWVAEGKDLDRLEISNAMINLRKRRMFGRALQL 209
Query: 575 SSWILKKSFFEFDESYYASHLDCLFKGYGALQAERYFANTIPSSMKGIAAHRILLTNYAV 754
S W EF E YAS LD + K G +AE Y + IP S KG +R LL N V
Sbjct: 210 SEWFEANKPQEFVERDYASRLDLIAKVRGLHKAEVYI-DKIPKSFKGEVIYRTLLANCVV 268
Query: 755 RKNAIAAQNLFWKMKELGFKLDVSDYNFVLLVYQRCHRDDVPKILKLMDDENIKPNEMTY 934
N A+ +F KM++L F + N +LL+Y+R + + +L LM+ EN+KP+ TY
Sbjct: 269 DHNVKKAEEVFNKMRDLEFPITPFACNQLLLLYKRLDKKKIADVLLLMEKENVKPSLFTY 328
Query: 935 KILIAYKSSIGDTLGMEEIVEKTKDLKDHADILLK--LAREYIRSAMEEKAETTLIDFE- 1105
KILI K D GM++IVE K DI + +AR Y+ ++EKAE L + E
Sbjct: 329 KILIDTKGQSNDMTGMDQIVETMKAEGIEPDIRTQAIMARHYVSGGLKEKAEAILKEMEG 388
Query: 1106 KNMEPDKETPGQKHYIFRKLVWLYSLLGKENDVQRYWKELMLVGDLYLKDYVAGILAWGK 1285
N+E + + R ++ LY LGK ++V R WK L + +A I AWG+
Sbjct: 389 GNLE-------EHRWACRFMLPLYGALGKADEVSRVWK--FCEKSPRLDECMAAIEAWGR 439
Query: 1286 LGNIIMSEHLFESMLQSKHKILAKHYNSLLHVYASHGLLHKAEDLVMRMSSNGVSV 1453
L I +E +FE M ++ K+ ++HY++LL VYA+H +L K +DL+ RM +G +
Sbjct: 440 LKKIDEAEAVFELMSKTWKKLSSRHYSTLLKVYANHKMLSKGKDLIKRMGDSGCRI 495
Score = 70.1 bits (170), Expect(2) = 2e-57
Identities = 29/84 (34%), Positives = 57/84 (67%)
Frame = +1
Query: 1507 SKMKPAFQTMLAVLKKYVEKGEIDNAERVFDKMRRMGYKRRTPMYKHLIRAYLDANAASY 1686
+K+KP + + L ++++Y KG+I NAE++F +MR+ GY+ R ++ LI+AY+ A A Y
Sbjct: 527 NKIKPMYSSFLIIMERYATKGDIHNAEKMFHRMRQAGYQARIRQFQTLIQAYIIAKAPCY 586
Query: 1687 RLRLKMRADRFIPDRNICELLQKL 1758
+R +++AD P++++ L ++
Sbjct: 587 GMRERLKADGIFPNKSLAAQLAQV 610
>ref|XP_006644067.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Oryza brachyantha]
Length = 594
Score = 176 bits (445), Expect(2) = 2e-57
Identities = 113/361 (31%), Positives = 191/361 (52%), Gaps = 2/361 (0%)
Frame = +2
Query: 404 KKNKVPMWEVCVGSNHFDVIRALEQWLSQGNVVNRPEVVATXXXXXXXXXXXXAVNISSW 583
K ++ + + + S DV A ++WL+ GN + R E+ A+ + +
Sbjct: 123 KASQSTLLKALLESPRTDVAGAAKKWLNSGNTLERSELFYVILCLRKRKLYRKALQLLEY 182
Query: 584 ILKKSFFEFDESYYASHLDCLFKGYGALQAERYFANTIPSSMKGIAAHRILLTNYAVRKN 763
+ + + E YASH+D + K +G +AE+Y + IP+S +G +R LL N N
Sbjct: 183 VEESKLLDLGERDYASHVDLVAKVHGIYKAEKYIED-IPASHRGEIVYRTLLANCVSIAN 241
Query: 764 AIAAQNLFWKMKELGFKLDVSDYNFVLLVYQRCHRDDVPKILKLMDDENIKPNEMTYKIL 943
A+ +F KMK+LGF + + N +LL+Y+R + + +L +M+ EN+KP+ TYK+L
Sbjct: 242 VKKAEQVFNKMKDLGFPVSLFSCNQLLLLYKRVDKKKLGDVLSMMEKENVKPSLFTYKLL 301
Query: 944 IAYKSSIGDTLGMEEIVEKTKDLKDHADILLK--LAREYIRSAMEEKAETTLIDFEKNME 1117
+ K + D ME+++E + D L++ +AR YI EKAE L ME
Sbjct: 302 VDTKGAARDIEDMEKVIETMQADGIEPDHLIQATIARHYIFCGHREKAEAIL----GQME 357
Query: 1118 PDKETPGQKHYIFRKLVWLYSLLGKENDVQRYWKELMLVGDLYLKDYVAGILAWGKLGNI 1297
D T + F ++ LY+LLGK DV+R+WK + + L++ + I A+G LG +
Sbjct: 358 EDDITENRSACKF--VLPLYALLGKSADVERHWK--VCEANPRLEECLPAIEAFGMLGEV 413
Query: 1298 IMSEHLFESMLQSKHKILAKHYNSLLHVYASHGLLHKAEDLVMRMSSNGVSVNRSIRSSL 1477
+E +FE+M ++ + ++ YN++L VYA+ L K ++L RM +G V S SL
Sbjct: 414 EKAEEIFENMFKTWKTLSSRFYNAMLKVYANKKLFDKGKELAKRMGDDGCRVGPSTLDSL 473
Query: 1478 I 1480
+
Sbjct: 474 V 474
Score = 75.9 bits (185), Expect(2) = 2e-57
Identities = 37/85 (43%), Positives = 53/85 (62%)
Frame = +1
Query: 1510 KMKPAFQTMLAVLKKYVEKGEIDNAERVFDKMRRMGYKRRTPMYKHLIRAYLDANAASYR 1689
K+KP + T L +L Y +KG+I NAE++F K+R+MGY R Y+ L+ AYL+A A Y
Sbjct: 498 KIKPMYNTYLMLLDSYSKKGDIHNAEKLFSKIRQMGYTGRIRQYQLLLEAYLNAKAPIYG 557
Query: 1690 LRLKMRADRFIPDRNICELLQKLAP 1764
R +M+AD P+R + LL P
Sbjct: 558 FRERMKADDIFPNRVVASLLAATDP 582
>gb|AFW79512.1| DNA-binding protein [Zea mays]
Length = 622
Score = 182 bits (462), Expect(2) = 3e-57
Identities = 116/343 (33%), Positives = 176/343 (51%), Gaps = 2/343 (0%)
Frame = +2
Query: 458 VIRALEQWLSQGNVVNRPEVVATXXXXXXXXXXXXAVNISSWILKKSFFEFDESYYASHL 637
V ALE+W GN +R E+ A+ + W+ K FEF E YA+HL
Sbjct: 169 VTSALEKWAKDGNAFDRGELYYVLLNLRKRHWYSKALELVEWVQKSQLFEFVERDYAAHL 228
Query: 638 DCLFKGYGALQAERYFANTIPSSMKGIAAHRILLTNYAVRKNAIAAQNLFWKMKELGFKL 817
D K YG +AE+ IP+S +G +R LL N N ++ +F +MK+LGF +
Sbjct: 229 DLTAKVYGLHKAEQTIEK-IPASCRGEIVYRTLLANCVSASNIKKSEQVFNRMKDLGFPV 287
Query: 818 DVSDYNFVLLVYQRCHRDDVPKILKLMDDENIKPNEMTYKILIAYKSSIGDTLGMEEIVE 997
+N +LL+Y+R R + +L +M+ E++KP+ TYKIL+ K S+GD ME+++E
Sbjct: 288 TQFSFNQLLLLYKRLDRKKIADVLAMMEKEDVKPSLFTYKILVDAKGSVGDIEAMEKVIE 347
Query: 998 KTKDLKDHADILLK--LAREYIRSAMEEKAETTLIDFEKNMEPDKETPGQKHYIFRKLVW 1171
+ D+ +AR YI EKAE L K ME D + + L+
Sbjct: 348 SMEKDSIEPDLTFNATIARHYIFYGQREKAEALL----KAMEGDDIQ--KNRAACKTLLP 401
Query: 1172 LYSLLGKENDVQRYWKELMLVGDLYLKDYVAGILAWGKLGNIIMSEHLFESMLQSKHKIL 1351
L++ LG + V+R WK + + + V+ I A+GKLG++ +E +FE ML +
Sbjct: 402 LHAFLGNSDAVERIWK--ACEDNTRVAESVSAIEAFGKLGDVEKAEKVFEDMLVHWKTLS 459
Query: 1352 AKHYNSLLHVYASHGLLHKAEDLVMRMSSNGVSVNRSIRSSLI 1480
+K YN+LL VYA H LL K ++L RM N V +L+
Sbjct: 460 SKFYNALLKVYADHNLLDKGKELAKRMDENRVRFGAPTLDALV 502
Score = 68.9 bits (167), Expect(2) = 3e-57
Identities = 31/84 (36%), Positives = 52/84 (61%)
Frame = +1
Query: 1513 MKPAFQTMLAVLKKYVEKGEIDNAERVFDKMRRMGYKRRTPMYKHLIRAYLDANAASYRL 1692
+KP + T + +L Y +KG++ N+E+VF+K+R+ GY R MY+ L+ AY+ A A +Y
Sbjct: 527 IKPIYNTYMTLLDSYSKKGDVRNSEKVFNKLRQSGYTGRIRMYQVLLHAYVRAKAPAYGF 586
Query: 1693 RLKMRADRFIPDRNICELLQKLAP 1764
R +M+AD P+ + L+ P
Sbjct: 587 RERMKADNIFPNSVVSTLIAATDP 610
>gb|ADN33879.1| DNA-binding protein [Cucumis melo subsp. melo]
Length = 608
Score = 189 bits (480), Expect(2) = 5e-57
Identities = 112/343 (32%), Positives = 193/343 (56%), Gaps = 2/343 (0%)
Frame = +2
Query: 458 VIRALEQWLSQGNVVNRPEVVATXXXXXXXXXXXXAVNISSWILKKSFFEFDESYYASHL 637
V AL++W+S+G+ ++R ++ +T A+ S W+ EF+E+ YASHL
Sbjct: 156 VTSALDKWVSEGHELSRDDISSTMFGLRKRRMFGKALQFSEWLEASGQLEFNEADYASHL 215
Query: 638 DCLFKGYGALQAERYFANTIPSSMKGIAAHRILLTNYAVRKNAIAAQNLFWKMKELGFKL 817
D + K G +AE Y A IP+S +G A +R LL NY + + A+ +F +MK+L F +
Sbjct: 216 DLIAKVQGLHKAETYIAK-IPNSFRGEAVYRTLLANYVLANDVKKAEEVFNRMKDLEFPM 274
Query: 818 DVSDYNFVLLVYQRCHRDDVPKILKLMDDENIKPNEMTYKILIAYKSSIGDTLGMEEIVE 997
Y+ +L++Y+R R + IL LM+ EN+KP TYKILI K D GME++V+
Sbjct: 275 TTFAYDQMLILYKRIDRRRIADILSLMEKENVKPRPFTYKILIDAKGLSNDISGMEQVVD 334
Query: 998 --KTKDLKDHADILLKLAREYIRSAMEEKAETTLIDFEKNMEPDKETPGQKHYIFRKLVW 1171
K + +K D LL LA+ Y+ +++KA L E+ P R L+
Sbjct: 335 TMKAEGIKLDVDTLLLLAKHYVLGGLKDKAMPILKATEEVNSKGSRWP------CRYLLP 388
Query: 1172 LYSLLGKENDVQRYWKELMLVGDLYLKDYVAGILAWGKLGNIIMSEHLFESMLQSKHKIL 1351
LY L E++V+R W+ + + +++ +A I+AWGKL NI +E +F+ ++++ ++
Sbjct: 389 LYGELQMEDEVRRLWE--ICEPNPNVEECMAAIVAWGKLKNIQEAEKIFDRVVKTWKRLS 446
Query: 1352 AKHYNSLLHVYASHGLLHKAEDLVMRMSSNGVSVNRSIRSSLI 1480
KHY++++ VY +L K ++LV +M+ +G ++ I +++
Sbjct: 447 TKHYSTMIKVYGDSKMLTKGKELVNQMAKSGCRIDPMIWDAVV 489
Score = 61.2 bits (147), Expect(2) = 5e-57
Identities = 27/82 (32%), Positives = 48/82 (58%)
Frame = +1
Query: 1513 MKPAFQTMLAVLKKYVEKGEIDNAERVFDKMRRMGYKRRTPMYKHLIRAYLDANAASYRL 1692
MKP F + ++ Y KG++ N+E++F K+R+ GY + L++AYL+A +Y +
Sbjct: 514 MKPLFDSYRTLMVHYARKGDVHNSEKIFHKIRQSGYPTHFGQFVTLVQAYLNAKTPAYGM 573
Query: 1693 RLKMRADRFIPDRNICELLQKL 1758
R +M AD P++ + L +L
Sbjct: 574 RERMMADNVFPNKALAGKLAQL 595