BLASTX nr result
ID: Ephedra25_contig00019299
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00019299
(408 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY26946.1| Nucleic acid binding protein, putative isoform 3 ... 74 3e-11
gb|EOY26945.1| Nucleic acid binding protein, putative isoform 2 ... 74 3e-11
gb|EOY26944.1| Nucleic acid binding protein, putative isoform 1 ... 74 3e-11
gb|ACN39915.1| unknown [Picea sitchensis] 72 6e-11
ref|XP_006465702.1| PREDICTED: poly(A) polymerase-like [Citrus s... 70 4e-10
ref|XP_006581465.1| PREDICTED: poly(A) polymerase-like isoform X... 68 1e-09
ref|XP_006581464.1| PREDICTED: poly(A) polymerase-like isoform X... 68 1e-09
ref|XP_006581463.1| PREDICTED: poly(A) polymerase-like isoform X... 68 1e-09
ref|XP_006581462.1| PREDICTED: poly(A) polymerase-like isoform X... 68 1e-09
ref|XP_003526506.1| PREDICTED: poly(A) polymerase-like isoform X... 68 1e-09
ref|XP_006426863.1| hypothetical protein CICLE_v10025039mg [Citr... 68 1e-09
ref|XP_006426861.1| hypothetical protein CICLE_v10025039mg [Citr... 68 1e-09
gb|EOY29806.1| Poly(A) polymerase 1 isoform 6 [Theobroma cacao] 68 1e-09
gb|EOY29805.1| Poly(A) polymerase 1 isoform 5 [Theobroma cacao] 68 1e-09
gb|EOY29804.1| Poly(A) polymerase 1 isoform 4 [Theobroma cacao] 68 1e-09
gb|EOY29803.1| Poly(A) polymerase 1 isoform 3 [Theobroma cacao] 68 1e-09
gb|EOY29802.1| Poly(A) polymerase 1 isoform 2 [Theobroma cacao] 68 1e-09
gb|EOY29801.1| Poly(A) polymerase 1 isoform 1 [Theobroma cacao] 68 1e-09
ref|XP_004302851.1| PREDICTED: poly(A) polymerase-like [Fragaria... 68 1e-09
ref|XP_004253101.1| PREDICTED: poly(A) polymerase-like [Solanum ... 68 1e-09
>gb|EOY26946.1| Nucleic acid binding protein, putative isoform 3 [Theobroma cacao]
Length = 697
Score = 73.6 bits (179), Expect = 3e-11
Identities = 34/58 (58%), Positives = 46/58 (79%)
Frame = +3
Query: 234 SPATPEAVTEAPKFGNTKPISLAGPTHSDLQQSRDLEHFLVESGLYESEEESALREQV 407
S +TP ++G TKPIS+AGPT +D+Q+SR+LE FLVE+GLY+SEEE+A RE+V
Sbjct: 8 SGSTPPVAVPVEQYGVTKPISMAGPTEADIQRSRELEKFLVEAGLYDSEEETAKREEV 65
>gb|EOY26945.1| Nucleic acid binding protein, putative isoform 2 [Theobroma cacao]
Length = 698
Score = 73.6 bits (179), Expect = 3e-11
Identities = 34/58 (58%), Positives = 46/58 (79%)
Frame = +3
Query: 234 SPATPEAVTEAPKFGNTKPISLAGPTHSDLQQSRDLEHFLVESGLYESEEESALREQV 407
S +TP ++G TKPIS+AGPT +D+Q+SR+LE FLVE+GLY+SEEE+A RE+V
Sbjct: 8 SGSTPPVAVPVEQYGVTKPISMAGPTEADIQRSRELEKFLVEAGLYDSEEETAKREEV 65
>gb|EOY26944.1| Nucleic acid binding protein, putative isoform 1 [Theobroma cacao]
Length = 672
Score = 73.6 bits (179), Expect = 3e-11
Identities = 34/58 (58%), Positives = 46/58 (79%)
Frame = +3
Query: 234 SPATPEAVTEAPKFGNTKPISLAGPTHSDLQQSRDLEHFLVESGLYESEEESALREQV 407
S +TP ++G TKPIS+AGPT +D+Q+SR+LE FLVE+GLY+SEEE+A RE+V
Sbjct: 8 SGSTPPVAVPVEQYGVTKPISMAGPTEADIQRSRELEKFLVEAGLYDSEEETAKREEV 65
>gb|ACN39915.1| unknown [Picea sitchensis]
Length = 701
Score = 72.4 bits (176), Expect = 6e-11
Identities = 37/55 (67%), Positives = 46/55 (83%)
Frame = +3
Query: 243 TPEAVTEAPKFGNTKPISLAGPTHSDLQQSRDLEHFLVESGLYESEEESALREQV 407
+PEA + +G TKPISL+GP+ SDLQ+SR+LE FLV +GLYESEEESALRE+V
Sbjct: 13 SPEATRQ---YGITKPISLSGPSGSDLQRSRELEEFLVSAGLYESEEESALREEV 64
>ref|XP_006465702.1| PREDICTED: poly(A) polymerase-like [Citrus sinensis]
Length = 697
Score = 69.7 bits (169), Expect = 4e-10
Identities = 35/59 (59%), Positives = 46/59 (77%)
Frame = +3
Query: 231 SSPATPEAVTEAPKFGNTKPISLAGPTHSDLQQSRDLEHFLVESGLYESEEESALREQV 407
SSP P+ ++G TKPIS+AGPT +D+Q++R+LE FLVE+GLYES+EE A REQV
Sbjct: 8 SSPPPPK------QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDAKREQV 60
>ref|XP_006581465.1| PREDICTED: poly(A) polymerase-like isoform X5 [Glycine max]
Length = 725
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/61 (55%), Positives = 46/61 (75%)
Frame = +3
Query: 225 GNSSPATPEAVTEAPKFGNTKPISLAGPTHSDLQQSRDLEHFLVESGLYESEEESALREQ 404
G S+P E + K+G TKP+SLAGPT +DLQ++ DL+ FL++SGLYES EESA R++
Sbjct: 9 GGSTPPHQEQQANS-KYGFTKPLSLAGPTDADLQRNNDLDKFLLDSGLYESNEESAARKE 67
Query: 405 V 407
V
Sbjct: 68 V 68
>ref|XP_006581464.1| PREDICTED: poly(A) polymerase-like isoform X4 [Glycine max]
Length = 727
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/61 (55%), Positives = 46/61 (75%)
Frame = +3
Query: 225 GNSSPATPEAVTEAPKFGNTKPISLAGPTHSDLQQSRDLEHFLVESGLYESEEESALREQ 404
G S+P E + K+G TKP+SLAGPT +DLQ++ DL+ FL++SGLYES EESA R++
Sbjct: 9 GGSTPPHQEQQANS-KYGFTKPLSLAGPTDADLQRNNDLDKFLLDSGLYESNEESAARKE 67
Query: 405 V 407
V
Sbjct: 68 V 68
>ref|XP_006581463.1| PREDICTED: poly(A) polymerase-like isoform X3 [Glycine max]
Length = 729
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/61 (55%), Positives = 46/61 (75%)
Frame = +3
Query: 225 GNSSPATPEAVTEAPKFGNTKPISLAGPTHSDLQQSRDLEHFLVESGLYESEEESALREQ 404
G S+P E + K+G TKP+SLAGPT +DLQ++ DL+ FL++SGLYES EESA R++
Sbjct: 9 GGSTPPHQEQQANS-KYGFTKPLSLAGPTDADLQRNNDLDKFLLDSGLYESNEESAARKE 67
Query: 405 V 407
V
Sbjct: 68 V 68
>ref|XP_006581462.1| PREDICTED: poly(A) polymerase-like isoform X2 [Glycine max]
Length = 747
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/61 (55%), Positives = 46/61 (75%)
Frame = +3
Query: 225 GNSSPATPEAVTEAPKFGNTKPISLAGPTHSDLQQSRDLEHFLVESGLYESEEESALREQ 404
G S+P E + K+G TKP+SLAGPT +DLQ++ DL+ FL++SGLYES EESA R++
Sbjct: 9 GGSTPPHQEQQANS-KYGFTKPLSLAGPTDADLQRNNDLDKFLLDSGLYESNEESAARKE 67
Query: 405 V 407
V
Sbjct: 68 V 68
>ref|XP_003526506.1| PREDICTED: poly(A) polymerase-like isoform X1 [Glycine max]
Length = 732
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/61 (55%), Positives = 46/61 (75%)
Frame = +3
Query: 225 GNSSPATPEAVTEAPKFGNTKPISLAGPTHSDLQQSRDLEHFLVESGLYESEEESALREQ 404
G S+P E + K+G TKP+SLAGPT +DLQ++ DL+ FL++SGLYES EESA R++
Sbjct: 9 GGSTPPHQEQQANS-KYGFTKPLSLAGPTDADLQRNNDLDKFLLDSGLYESNEESAARKE 67
Query: 405 V 407
V
Sbjct: 68 V 68
>ref|XP_006426863.1| hypothetical protein CICLE_v10025039mg [Citrus clementina]
gi|557528853|gb|ESR40103.1| hypothetical protein
CICLE_v10025039mg [Citrus clementina]
Length = 697
Score = 67.8 bits (164), Expect = 1e-09
Identities = 34/59 (57%), Positives = 45/59 (76%)
Frame = +3
Query: 231 SSPATPEAVTEAPKFGNTKPISLAGPTHSDLQQSRDLEHFLVESGLYESEEESALREQV 407
SSP P+ ++G TKPIS+AGPT +D+Q++R+LE FLVE+GLYES+EE REQV
Sbjct: 8 SSPPPPK------QYGVTKPISMAGPTEADIQRNRELEKFLVEAGLYESKEEDEKREQV 60
>ref|XP_006426861.1| hypothetical protein CICLE_v10025039mg [Citrus clementina]
gi|567868479|ref|XP_006426862.1| hypothetical protein
CICLE_v10025039mg [Citrus clementina]
gi|567868483|ref|XP_006426864.1| hypothetical protein
CICLE_v10025039mg [Citrus clementina]
gi|557528851|gb|ESR40101.1| hypothetical protein
CICLE_v10025039mg [Citrus clementina]
gi|557528852|gb|ESR40102.1| hypothetical protein
CICLE_v10025039mg [Citrus clementina]
gi|557528854|gb|ESR40104.1| hypothetical protein
CICLE_v10025039mg [Citrus clementina]
Length = 677
Score = 67.8 bits (164), Expect = 1e-09
Identities = 34/59 (57%), Positives = 45/59 (76%)
Frame = +3
Query: 231 SSPATPEAVTEAPKFGNTKPISLAGPTHSDLQQSRDLEHFLVESGLYESEEESALREQV 407
SSP P+ ++G TKPIS+AGPT +D+Q++R+LE FLVE+GLYES+EE REQV
Sbjct: 8 SSPPPPK------QYGVTKPISMAGPTEADIQRNRELEKFLVEAGLYESKEEDEKREQV 60
>gb|EOY29806.1| Poly(A) polymerase 1 isoform 6 [Theobroma cacao]
Length = 751
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/64 (48%), Positives = 48/64 (75%)
Frame = +3
Query: 216 VDMGNSSPATPEAVTEAPKFGNTKPISLAGPTHSDLQQSRDLEHFLVESGLYESEEESAL 395
+D + + ++P+ K+G TKPISLAGP+ +D+Q++ +LE FL+ESGLYES+EE+
Sbjct: 1 MDTRSPNGSSPQQSQSLKKYGITKPISLAGPSEADVQRNTELEKFLIESGLYESKEEAVK 60
Query: 396 REQV 407
RE+V
Sbjct: 61 REEV 64
>gb|EOY29805.1| Poly(A) polymerase 1 isoform 5 [Theobroma cacao]
Length = 801
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/64 (48%), Positives = 48/64 (75%)
Frame = +3
Query: 216 VDMGNSSPATPEAVTEAPKFGNTKPISLAGPTHSDLQQSRDLEHFLVESGLYESEEESAL 395
+D + + ++P+ K+G TKPISLAGP+ +D+Q++ +LE FL+ESGLYES+EE+
Sbjct: 1 MDTRSPNGSSPQQSQSLKKYGITKPISLAGPSEADVQRNTELEKFLIESGLYESKEEAVK 60
Query: 396 REQV 407
RE+V
Sbjct: 61 REEV 64
>gb|EOY29804.1| Poly(A) polymerase 1 isoform 4 [Theobroma cacao]
Length = 804
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/64 (48%), Positives = 48/64 (75%)
Frame = +3
Query: 216 VDMGNSSPATPEAVTEAPKFGNTKPISLAGPTHSDLQQSRDLEHFLVESGLYESEEESAL 395
+D + + ++P+ K+G TKPISLAGP+ +D+Q++ +LE FL+ESGLYES+EE+
Sbjct: 1 MDTRSPNGSSPQQSQSLKKYGITKPISLAGPSEADVQRNTELEKFLIESGLYESKEEAVK 60
Query: 396 REQV 407
RE+V
Sbjct: 61 REEV 64
>gb|EOY29803.1| Poly(A) polymerase 1 isoform 3 [Theobroma cacao]
Length = 811
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/64 (48%), Positives = 48/64 (75%)
Frame = +3
Query: 216 VDMGNSSPATPEAVTEAPKFGNTKPISLAGPTHSDLQQSRDLEHFLVESGLYESEEESAL 395
+D + + ++P+ K+G TKPISLAGP+ +D+Q++ +LE FL+ESGLYES+EE+
Sbjct: 1 MDTRSPNGSSPQQSQSLKKYGITKPISLAGPSEADVQRNTELEKFLIESGLYESKEEAVK 60
Query: 396 REQV 407
RE+V
Sbjct: 61 REEV 64
>gb|EOY29802.1| Poly(A) polymerase 1 isoform 2 [Theobroma cacao]
Length = 812
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/64 (48%), Positives = 48/64 (75%)
Frame = +3
Query: 216 VDMGNSSPATPEAVTEAPKFGNTKPISLAGPTHSDLQQSRDLEHFLVESGLYESEEESAL 395
+D + + ++P+ K+G TKPISLAGP+ +D+Q++ +LE FL+ESGLYES+EE+
Sbjct: 1 MDTRSPNGSSPQQSQSLKKYGITKPISLAGPSEADVQRNTELEKFLIESGLYESKEEAVK 60
Query: 396 REQV 407
RE+V
Sbjct: 61 REEV 64
>gb|EOY29801.1| Poly(A) polymerase 1 isoform 1 [Theobroma cacao]
Length = 817
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/64 (48%), Positives = 48/64 (75%)
Frame = +3
Query: 216 VDMGNSSPATPEAVTEAPKFGNTKPISLAGPTHSDLQQSRDLEHFLVESGLYESEEESAL 395
+D + + ++P+ K+G TKPISLAGP+ +D+Q++ +LE FL+ESGLYES+EE+
Sbjct: 1 MDTRSPNGSSPQQSQSLKKYGITKPISLAGPSEADVQRNTELEKFLIESGLYESKEEAVK 60
Query: 396 REQV 407
RE+V
Sbjct: 61 REEV 64
>ref|XP_004302851.1| PREDICTED: poly(A) polymerase-like [Fragaria vesca subsp. vesca]
Length = 601
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/64 (51%), Positives = 49/64 (76%)
Frame = +3
Query: 216 VDMGNSSPATPEAVTEAPKFGNTKPISLAGPTHSDLQQSRDLEHFLVESGLYESEEESAL 395
++ ++P P+AV ++G TKPIS+AGPT SD+Q++ +LE FLVE+ LYES+EE+A
Sbjct: 3 LERSGAAPPPPQAVV-GKQYGLTKPISIAGPTESDIQRTLELEKFLVEARLYESKEEAAK 61
Query: 396 REQV 407
RE+V
Sbjct: 62 REEV 65
>ref|XP_004253101.1| PREDICTED: poly(A) polymerase-like [Solanum lycopersicum]
Length = 606
Score = 67.8 bits (164), Expect = 1e-09
Identities = 36/60 (60%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Frame = +3
Query: 231 SSPATPEAVTEAPK-FGNTKPISLAGPTHSDLQQSRDLEHFLVESGLYESEEESALREQV 407
SS + E+V PK +G TKP+SLAGPT +DLQ++ +LE FL ES LYESEEE+A RE+V
Sbjct: 3 SSESLSESVAPPPKKYGVTKPLSLAGPTETDLQRNAELEKFLRESELYESEEETARREEV 62