BLASTX nr result

ID: Ephedra25_contig00019186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00019186
         (664 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25330.1| unknown [Picea sitchensis]                              65   2e-08
gb|ACN39879.1| unknown [Picea sitchensis]                              65   2e-08
ref|XP_004294290.1| PREDICTED: zinc finger CCCH domain-containin...    61   3e-07

>gb|ABK25330.1| unknown [Picea sitchensis]
          Length = 360

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 38/79 (48%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
 Frame = +3

Query: 3   SPTGKLDWGVNEEELTKFRKSRSFACRGSNEQGPSLVPTSAKESTDGAREG-SPDFHVEP 179
           SPTGK +WGV + EL KFRKS SF  R SNE   S V TS KE+   A EG +  F +E 
Sbjct: 271 SPTGKANWGVQKGELNKFRKSASFGFRTSNEPDLSWVQTSVKENPVDAVEGCTVGFSLEA 330

Query: 180 LANGHLENPDPGALAAWMD 236
           L N   EN +   L  W +
Sbjct: 331 LRNRQSENINNAVLGTWAE 349


>gb|ACN39879.1| unknown [Picea sitchensis]
          Length = 768

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 37/81 (45%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
 Frame = +3

Query: 3   SPTGKLDWGVNEEELTKFRKSRSFACRGSNEQGPSLVPTSAKEST-DGAREGSPDFHVEP 179
           SPTGK+DWGV  EEL+K RKS SF  R   E   S V T  KE+T DG   G+     E 
Sbjct: 681 SPTGKVDWGVQGEELSKLRKSASFGPRSYEEPDLSWVQTLVKETTPDGKDGGNVGCSGET 740

Query: 180 LANGHLENPDPGALAAWMDNI 242
              G +EN D   L AW++ +
Sbjct: 741 PHKGQIENVDHSVLGAWIEQM 761


>ref|XP_004294290.1| PREDICTED: zinc finger CCCH domain-containing protein 66-like
           [Fragaria vesca subsp. vesca]
          Length = 701

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
 Frame = +3

Query: 3   SPTGKLDWGVNEEELTKFRKSRSFACRGSNEQGP-------SLVPTSAKESTDGAREGSP 161
           SP GKLDWG+  EEL K RKS SF  R +    P       S V T  K++   +R G  
Sbjct: 606 SPNGKLDWGIQGEELNKLRKSASFGYRNNGNSFPTVDEPDVSWVNTLVKDAPPPSRPGPL 665

Query: 162 DFHVEPLANGHLENPDPGALAAWMDNI 242
            F  +     HLEN D   L+AW++ +
Sbjct: 666 GFEEQQQQQCHLENGDAEILSAWVEQL 692


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