BLASTX nr result
ID: Ephedra25_contig00019042
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00019042
(426 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR16307.1| unknown [Picea sitchensis] 93 4e-17
ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 91 1e-16
gb|EOX92993.1| Uncharacterized protein TCM_001856 [Theobroma cacao] 91 2e-16
gb|EOY22757.1| Uncharacterized protein TCM_014834 [Theobroma cacao] 91 2e-16
gb|EOY13153.1| Uncharacterized protein TCM_031677 [Theobroma cacao] 90 3e-16
gb|ABR67407.1| integrase [Cucumis melo subsp. melo] 90 3e-16
gb|AAD15534.1| putative retroelement pol polyprotein [Arabidopsi... 89 6e-16
ref|XP_003376808.1| retrovirus-related Pol polyprotein from tran... 89 8e-16
emb|CAN71037.1| hypothetical protein VITISV_011061 [Vitis vinifera] 89 8e-16
gb|AAG10812.1|AC018460_6 Putative retroelement polyprotein [Arab... 88 1e-15
gb|EOY12702.1| Uncharacterized protein TCM_031224 [Theobroma cacao] 87 2e-15
gb|ACB59199.1| copia-like protein [Brassica oleracea] 87 2e-15
gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsi... 87 2e-15
emb|CAN72453.1| hypothetical protein VITISV_008931 [Vitis vinifera] 87 2e-15
emb|CAN74029.1| hypothetical protein VITISV_013540 [Vitis vinifera] 87 2e-15
dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsi... 86 4e-15
gb|EOY17849.1| Copia-like retrotransposable element, putative [T... 86 5e-15
emb|CAN69956.1| hypothetical protein VITISV_032883 [Vitis vinifera] 86 5e-15
ref|XP_003376336.1| retrovirus-related Pol polyprotein from tran... 85 9e-15
gb|ABW74576.1| pol polyprotein [Boechera divaricarpa] 85 9e-15
>gb|ABR16307.1| unknown [Picea sitchensis]
Length = 407
Score = 92.8 bits (229), Expect = 4e-17
Identities = 47/115 (40%), Positives = 63/115 (54%)
Frame = +1
Query: 1 WYNMKPSISHLRVFGCLCYYHIPKELRGKLDPKAKKGIMVGYSETRKGYKIIDEETKKVI 180
W KP++SH +VFGC Y HIP E R KLD K+ K IMVGYSET K Y++ D E +++
Sbjct: 291 WSRRKPTVSHFKVFGCDVYVHIPDEKRKKLDRKSHKCIMVGYSETSKAYRVYDPEKNEIL 350
Query: 181 VSRDVEFIEDNIPYISNKPKEIISHIQIEGFDESNMETSEKENILEIKETNVTRP 345
+ RDV F E IP + S I + E N++ E E +E + P
Sbjct: 351 IRRDVIFDERCIPSTKSSSLSPTSSILCDQTSEENLDEIANEESSESREEEIVAP 405
>ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216349
[Cucumis sativus]
Length = 1830
Score = 91.3 bits (225), Expect = 1e-16
Identities = 52/136 (38%), Positives = 80/136 (58%), Gaps = 1/136 (0%)
Frame = +1
Query: 1 WYNMKPSISHLRVFGCLCYYHIPKELRGKLDPKAKKGIMVGYSETRKGYKIIDEETKKVI 180
W +KP++SHLRVFGC+ Y HI E RGKLD K++K I VGYSE K Y++ + +KKVI
Sbjct: 653 WSGLKPTVSHLRVFGCIAYSHISDEKRGKLDDKSEKCIFVGYSENSKAYRLYNPISKKVI 712
Query: 181 VSRDVEFIEDNIPYISNKPKEIISHIQIEGFDESNMETSEKENILEIKETN-VTRPEQND 357
+SRDV+F E + + N P E + + I+ M+ + LE++ T +T P +
Sbjct: 713 ISRDVKFDEAKL-WQWNAPNEDQNPLHID------MDGKKDARDLELEVTQPLTSPSSSH 765
Query: 358 EVPNDQDHSSQEEIIQ 405
+++ + + IQ
Sbjct: 766 STSDEETTPRKTKNIQ 781
>gb|EOX92993.1| Uncharacterized protein TCM_001856 [Theobroma cacao]
Length = 711
Score = 90.9 bits (224), Expect = 2e-16
Identities = 39/70 (55%), Positives = 51/70 (72%)
Frame = +1
Query: 1 WYNMKPSISHLRVFGCLCYYHIPKELRGKLDPKAKKGIMVGYSETRKGYKIIDEETKKVI 180
WY+ KPS+ HLR+F +CY+H+P+ELR KL PKAK G+ +GYS+ K Y+I E+ KV
Sbjct: 471 WYSSKPSVDHLRIFESICYFHVPEELRDKLQPKAKLGVFIGYSQQSKAYRIYQIESGKVS 530
Query: 181 VSRDVEFIED 210
VSR V F ED
Sbjct: 531 VSRHVTFDED 540
>gb|EOY22757.1| Uncharacterized protein TCM_014834 [Theobroma cacao]
Length = 996
Score = 90.5 bits (223), Expect = 2e-16
Identities = 42/109 (38%), Positives = 65/109 (59%)
Frame = +1
Query: 1 WYNMKPSISHLRVFGCLCYYHIPKELRGKLDPKAKKGIMVGYSETRKGYKIIDEETKKVI 180
WYN +PS+ HLR+FG +CY H+P+ELR KL PKAK G+ +GYS+ K Y+I E+ KV
Sbjct: 469 WYNTRPSVDHLRIFGSICYLHVPEELRDKLQPKAKLGVFIGYSQQSKAYRIYQIESGKVF 528
Query: 181 VSRDVEFIEDNIPYISNKPKEIISHIQIEGFDESNMETSEKENILEIKE 327
SR V F E N + + ++ N++ + + IL++++
Sbjct: 529 GSRHVTFNEGAYWNWENNQVQHTKFLD----EDVNLQPASSDEILDVEQ 573
>gb|EOY13153.1| Uncharacterized protein TCM_031677 [Theobroma cacao]
Length = 1061
Score = 90.1 bits (222), Expect = 3e-16
Identities = 37/69 (53%), Positives = 54/69 (78%)
Frame = +1
Query: 1 WYNMKPSISHLRVFGCLCYYHIPKELRGKLDPKAKKGIMVGYSETRKGYKIIDEETKKVI 180
W+++KP+I+HLRVFGC+CY +P RGKLD K+ + +GYS+ KGY+++D +T+KV
Sbjct: 603 WFDVKPAINHLRVFGCICYSKVPDAKRGKLDEKSLVAVHLGYSQVSKGYRVLDVKTRKVF 662
Query: 181 VSRDVEFIE 207
VSRDV+F E
Sbjct: 663 VSRDVKFDE 671
>gb|ABR67407.1| integrase [Cucumis melo subsp. melo]
Length = 1281
Score = 89.7 bits (221), Expect = 3e-16
Identities = 49/133 (36%), Positives = 76/133 (57%), Gaps = 2/133 (1%)
Frame = +1
Query: 1 WYNMKPSISHLRVFGCLCYYHIPKELRGKLDPKAKKGIMVGYSETRKGYKIIDEETKKVI 180
W + KPS+SHL+VF + Y HIP +LRGKLD K++K IMVGY+E K Y++ + ++K+I
Sbjct: 644 WCDEKPSVSHLKVFRSIAYSHIPNQLRGKLDDKSEKCIMVGYNENSKAYRLYNPVSRKII 703
Query: 181 VSRDVEFIEDNIPYISNKPKEIIS--HIQIEGFDESNMETSEKENILEIKETNVTRPEQN 354
++RDV F ED ++ E S H+ I + + K +E ++ + N
Sbjct: 704 INRDVIFSEDESWNWNDDVDEAKSPFHVNINENEVAQELEQAKIQAVESSSSSTSSSTSN 763
Query: 355 DEVPNDQDHSSQE 393
DE+ + S QE
Sbjct: 764 DEISPRRMRSIQE 776
>gb|AAD15534.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1664
Score = 89.0 bits (219), Expect = 6e-16
Identities = 48/141 (34%), Positives = 82/141 (58%), Gaps = 12/141 (8%)
Frame = +1
Query: 10 MKPSISHLRVFGCLCYYHIPKELRGKLDPKAKKGIMVGYSETRKGYKIIDEETKKVIVSR 189
+KP I+HLRVFGC+C+ I E R KL PK+ KG+ +GYS +KGYK ET+KV++SR
Sbjct: 653 VKPFINHLRVFGCVCFVLISGEQRNKLQPKSTKGMFIGYSINQKGYKCYVLETRKVLISR 712
Query: 190 DVEFIE----------DNIPYISNKPKEIISHIQI--EGFDESNMETSEKENILEIKETN 333
DV+F+E ++I +++ P + ++++I E SN++T
Sbjct: 713 DVKFLESKSYYDKKNWEDIQDLTDSPSDRATNLRIILERLGVSNIQTQTTPR--TSNPET 770
Query: 334 VTRPEQNDEVPNDQDHSSQEE 396
+T+PE +E +++ +++
Sbjct: 771 ITQPENMEEEEEEEEEEEEKQ 791
>ref|XP_003376808.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trichinella spiralis] gi|316974460|gb|EFV57947.1|
retrovirus-related Pol polyprotein from transposon TNT
1-94 [Trichinella spiralis]
Length = 1324
Score = 88.6 bits (218), Expect = 8e-16
Identities = 37/73 (50%), Positives = 52/73 (71%)
Frame = +1
Query: 1 WYNMKPSISHLRVFGCLCYYHIPKELRGKLDPKAKKGIMVGYSETRKGYKIIDEETKKVI 180
W KP+++HL+VFGCL H+P R K DPK+++ I VGY ET KGY+ +D +TKK+
Sbjct: 639 WSGRKPNLAHLKVFGCLAMVHVPSGQRKKWDPKSEERIFVGYCETSKGYRTVDRKTKKMY 698
Query: 181 VSRDVEFIEDNIP 219
V+RDV+F+E P
Sbjct: 699 VTRDVKFLESQFP 711
>emb|CAN71037.1| hypothetical protein VITISV_011061 [Vitis vinifera]
Length = 1220
Score = 88.6 bits (218), Expect = 8e-16
Identities = 36/71 (50%), Positives = 51/71 (71%)
Frame = +1
Query: 1 WYNMKPSISHLRVFGCLCYYHIPKELRGKLDPKAKKGIMVGYSETRKGYKIIDEETKKVI 180
W+ +KPS+ HL+VFG LCY H+P RGKLD +A+KG+ VGY+ KGY+I K++
Sbjct: 641 WFGVKPSVKHLKVFGSLCYLHVPSVKRGKLDERAEKGVFVGYAAESKGYRIYSLSRMKIV 700
Query: 181 VSRDVEFIEDN 213
+SRDV F E++
Sbjct: 701 ISRDVHFDENS 711
>gb|AAG10812.1|AC018460_6 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1404
Score = 87.8 bits (216), Expect = 1e-15
Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 25/160 (15%)
Frame = +1
Query: 7 NMKPSISHLRVFGCLCYYHIPKELRGKLDPKAKKGIMVGYSETRKGYKIIDEETKKVIVS 186
N KP I HLRVFGC+C+ IP E R KLD K+ K + +GYS T+KGYK D + +S
Sbjct: 668 NTKPFIDHLRVFGCVCFVLIPGEQRSKLDAKSTKCMFLGYSTTQKGYKCFDPTKNRTFIS 727
Query: 187 RDVEFIE----------DNIPYISNKPKEIISHIQIEGFDESNMETSEKENILEIKETNV 336
RDV+F+E +N+ +++ + + ++ N TS ++ E+ +
Sbjct: 728 RDVKFLENQDYNNKKDWENLKDLTHSTSDRVETLKFLLDHLGNDSTSTTQHQPEMTQDQE 787
Query: 337 TRPEQNDEV---------------PNDQDHSSQEEIIQSD 411
++N+EV PN Q+HS + IQ D
Sbjct: 788 DLNQENEEVSLQHQENLTHVQEDPPNTQEHSEHVQEIQDD 827
>gb|EOY12702.1| Uncharacterized protein TCM_031224 [Theobroma cacao]
Length = 3109
Score = 87.4 bits (215), Expect = 2e-15
Identities = 46/128 (35%), Positives = 77/128 (60%)
Frame = +1
Query: 1 WYNMKPSISHLRVFGCLCYYHIPKELRGKLDPKAKKGIMVGYSETRKGYKIIDEETKKVI 180
W+ +KPSI L+VFGC+CY IP E R KLDPK++ + +G+SE KGY++ + ETKK+
Sbjct: 461 WHGLKPSIVGLKVFGCVCYAKIPDEKRSKLDPKSQIAVHLGFSEVSKGYRLYNIETKKIF 520
Query: 181 VSRDVEFIEDNIPYISNKPKEIISHIQIEGFDESNMETSEKENILEIKETNVTRPEQNDE 360
VSRDV F ++ + + +D+S++E S N+ + + ++ EQ ++
Sbjct: 521 VSRDVRF-DERLKW---------------SWDKSDVEQSWNPNL--VGDVFLSEKEQAED 562
Query: 361 VPNDQDHS 384
+ + +D S
Sbjct: 563 LEDVEDES 570
>gb|ACB59199.1| copia-like protein [Brassica oleracea]
Length = 975
Score = 87.4 bits (215), Expect = 2e-15
Identities = 49/137 (35%), Positives = 78/137 (56%), Gaps = 13/137 (9%)
Frame = +1
Query: 13 KPSISHLRVFGCLCYYHIPKELRGKLDPKAKKGIMVGYSETRKGYKIIDEETKKVIVSRD 192
KPS+ H+++FGCLC+ +P ELR KL+ ++ K + VGYS ++KGYK D T++V+VSR+
Sbjct: 385 KPSLEHMKIFGCLCFVMVPGELRNKLEARSSKAMFVGYSSSQKGYKCYDPNTRRVLVSRE 444
Query: 193 VEFIEDNIPY---ISNKPKEIIS------HIQIEG----FDESNMETSEKENILEIKETN 333
V+F+E+ Y I K++ S I +EG D+ ETS E+ E
Sbjct: 445 VKFVEEKGYYEEQIQEDLKDLTSDRAAPLRIILEGLGINMDQGQQETSNLEH--EGGNGT 502
Query: 334 VTRPEQNDEVPNDQDHS 384
T+ + ++E D +
Sbjct: 503 ETQTQSHEESSGSHDQA 519
>gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1347
Score = 87.4 bits (215), Expect = 2e-15
Identities = 49/135 (36%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Frame = +1
Query: 1 WYNMKPSISHLRVFGCLCYYHIPKELRGKLDPKAKKGIMVGYSETRKGYKIIDEETKKVI 180
W KP++SHLR+FG +CY HIP + R KLD KAK GI++GYS KGY++ E +KV
Sbjct: 663 WCGHKPNVSHLRIFGSICYVHIPDQKRRKLDAKAKCGILIGYSNQTKGYRVFLLEDEKVE 722
Query: 181 VSRDVEFIEDNIPYISNKPKEIISHIQIEGFDESNMETSEKENILEIKETNVTRPEQ--- 351
VSRDV F ED + +D E +K ++ I + +R +Q
Sbjct: 723 VSRDVVFQED------------------KKWDWDKQEEVKKTFVMSINDIQESRDQQETS 764
Query: 352 NDEVPNDQDHSSQEE 396
+ ++ DH++ E
Sbjct: 765 SHDLSQIDDHANNGE 779
>emb|CAN72453.1| hypothetical protein VITISV_008931 [Vitis vinifera]
Length = 977
Score = 87.0 bits (214), Expect = 2e-15
Identities = 35/71 (49%), Positives = 50/71 (70%)
Frame = +1
Query: 1 WYNMKPSISHLRVFGCLCYYHIPKELRGKLDPKAKKGIMVGYSETRKGYKIIDEETKKVI 180
W+ +KPS+ HL+VFG CY H+P RGKLD +AKKG+ VGY+ KGY+I K++
Sbjct: 415 WFGVKPSVKHLKVFGSFCYLHVPSVKRGKLDERAKKGVFVGYAAESKGYRIYSLSRMKIV 474
Query: 181 VSRDVEFIEDN 213
+SR+V F E++
Sbjct: 475 ISREVHFDENS 485
>emb|CAN74029.1| hypothetical protein VITISV_013540 [Vitis vinifera]
Length = 894
Score = 87.0 bits (214), Expect = 2e-15
Identities = 34/69 (49%), Positives = 53/69 (76%)
Frame = +1
Query: 1 WYNMKPSISHLRVFGCLCYYHIPKELRGKLDPKAKKGIMVGYSETRKGYKIIDEETKKVI 180
WY +KP ++HL++FG +CYYH+P+ R KLD +A+KGI++GY + KGY+I +T KV+
Sbjct: 247 WYGVKPFVNHLKIFGSICYYHVPEPKRSKLDSRAQKGILIGYGTSTKGYRIFCLQTNKVV 306
Query: 181 VSRDVEFIE 207
+SR+V+ E
Sbjct: 307 LSRNVKVDE 315
>dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1499
Score = 86.3 bits (212), Expect = 4e-15
Identities = 39/69 (56%), Positives = 48/69 (69%)
Frame = +1
Query: 1 WYNMKPSISHLRVFGCLCYYHIPKELRGKLDPKAKKGIMVGYSETRKGYKIIDEETKKVI 180
W KPS+ HL+VFGC+CY HIP E R KLD KAK+GI VGYS KGY++ +K+
Sbjct: 674 WSGKKPSVDHLKVFGCVCYIHIPDEKRRKLDTKAKQGIFVGYSNESKGYRVFLLNEEKIE 733
Query: 181 VSRDVEFIE 207
VS+DV F E
Sbjct: 734 VSKDVTFDE 742
>gb|EOY17849.1| Copia-like retrotransposable element, putative [Theobroma cacao]
Length = 1090
Score = 85.9 bits (211), Expect = 5e-15
Identities = 37/72 (51%), Positives = 50/72 (69%)
Frame = +1
Query: 1 WYNMKPSISHLRVFGCLCYYHIPKELRGKLDPKAKKGIMVGYSETRKGYKIIDEETKKVI 180
WY+ +PS+ HLR+F +CY H+P+ELR KL PKAK G+ +GYS+ K Y+I E+ KV
Sbjct: 607 WYSTRPSVDHLRIFASICYLHVPEELRDKLQPKAKLGVFIGYSQQSKAYRIYQIESGKVS 666
Query: 181 VSRDVEFIEDNI 216
VS V F E+ I
Sbjct: 667 VSIHVTFDEEQI 678
>emb|CAN69956.1| hypothetical protein VITISV_032883 [Vitis vinifera]
Length = 811
Score = 85.9 bits (211), Expect = 5e-15
Identities = 41/131 (31%), Positives = 71/131 (54%), Gaps = 11/131 (8%)
Frame = +1
Query: 1 WYNMKPSISHLRVFGCLCYYHIPKELRGKLDPKAKKGIMVGYSETRKGYKIIDEETKKVI 180
W+ KP + +LR FGCLC+ ++P+ R KLD KAK G+ +GYS + + Y+I + K++
Sbjct: 336 WFGYKPDLQNLRTFGCLCFSYVPQVKRDKLDKKAKPGVFIGYSNSSEAYRIFQPQNGKIL 395
Query: 181 VSRDVEFIED-----------NIPYISNKPKEIISHIQIEGFDESNMETSEKENILEIKE 327
VS+DV+F+ED +P + E I + + G +S + E+ N+ +
Sbjct: 396 VSKDVKFMEDRQWNCEESIKMQLPEVPRYFDEDIDDVPVRG-TKSLSDVYERSNVAVFEP 454
Query: 328 TNVTRPEQNDE 360
E++D+
Sbjct: 455 VEFEEAEKDDK 465
>ref|XP_003376336.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trichinella spiralis] gi|316974954|gb|EFV58419.1|
retrovirus-related Pol polyprotein from transposon TNT
1-94 [Trichinella spiralis]
Length = 1003
Score = 85.1 bits (209), Expect = 9e-15
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 3/139 (2%)
Frame = +1
Query: 1 WYNMKPSISHLRVFGCLCYYHIPKELRGKLDPKAKKGIMVGYSETRKGYKIIDEETKKVI 180
W KP+++HL+VFGCL H+P R K D K+++ I VGY ET KGY+ +D +TKK+
Sbjct: 332 WSGRKPNLAHLKVFGCLAMVHVPSGQRKKWDLKSEERIFVGYCETSKGYRTVDRKTKKMY 391
Query: 181 VSRDVEFIEDNIPYISNKPKEIISHIQIEGFDESNMETSEKENILEI---KETNVTRPEQ 351
V+RDV+F+E P + EG S M E + + +++ T +
Sbjct: 392 VTRDVKFLESQFPG---------TQASKEGSTNSLMSPDVGEEAVIVWTSQDSGSTEMDP 442
Query: 352 NDEVPNDQDHSSQEEIIQS 408
N P D S + I Q+
Sbjct: 443 NPSAPLKVDTDSDKSIGQN 461
>gb|ABW74576.1| pol polyprotein [Boechera divaricarpa]
Length = 708
Score = 85.1 bits (209), Expect = 9e-15
Identities = 45/121 (37%), Positives = 69/121 (57%), Gaps = 20/121 (16%)
Frame = +1
Query: 1 WYNMKPSISHLRVFGCLCYYHIPKELRGKLDPKAKKGIMVGYSETRKGYKIIDEETKKVI 180
W KP++ HL+VFG +CY HIPKE R KLD KAK+GI + YS KGY+++ + ++
Sbjct: 470 WSGNKPTVEHLKVFGSICYIHIPKEKRSKLDKKAKRGIFISYSSKSKGYRVLLLDKTEIE 529
Query: 181 VSRDVEFIED---------------NIPYISNKPKE-----IISHIQIEGFDESNMETSE 300
+SRDV F E+ NIP +++P+E I S + + D++N + E
Sbjct: 530 ISRDVVFKEEKKWDWVRQEEVKKTLNIPVSTSQPQEEQRQVISSPVLSQLSDQANNQGGE 589
Query: 301 K 303
+
Sbjct: 590 R 590