BLASTX nr result

ID: Ephedra25_contig00018454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00018454
         (550 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001784993.1| predicted protein [Physcomitrella patens] gi...    56   5e-06
ref|XP_001770107.1| predicted protein [Physcomitrella patens] gi...    55   9e-06

>ref|XP_001784993.1| predicted protein [Physcomitrella patens]
           gi|162663451|gb|EDQ50214.1| predicted protein
           [Physcomitrella patens]
          Length = 324

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 27/54 (50%), Positives = 37/54 (68%)
 Frame = -2

Query: 546 EVSSTITCCDCRHSSVVFESYLDLSLPIPSRPNHQKSMASLEASIVSANSGKKQ 385
           + SST+TCC+C HSSVV+E +LDLSLPIPS+ +  K+     A  +    GKK+
Sbjct: 141 QYSSTVTCCECGHSSVVYEPFLDLSLPIPSKQSFGKT-----AEPIGEEIGKKK 189


>ref|XP_001770107.1| predicted protein [Physcomitrella patens]
           gi|162678633|gb|EDQ65089.1| predicted protein
           [Physcomitrella patens]
          Length = 334

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
 Frame = -2

Query: 546 EVSSTITCCDCRHSSVVFESYLDLSLPIPSRPNHQKSMASLEASIVSANS--GKKQESES 373
           + SST+TCC+C HSSVV+E +LDLSLPIPS+ +  K    +   I+       KK E+++
Sbjct: 144 QFSSTVTCCECGHSSVVYEPFLDLSLPIPSKQSLGKISEPMGVPILPKEEICAKKLETDA 203

Query: 372 KEI 364
            ++
Sbjct: 204 PKL 206


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