BLASTX nr result

ID: Ephedra25_contig00018294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00018294
         (402 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK27001.1| unknown [Picea sitchensis]                              74   2e-11
ref|XP_006851238.1| hypothetical protein AMTR_s00180p00024800 [A...    68   1e-09

>gb|ABK27001.1| unknown [Picea sitchensis]
          Length = 113

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 35/101 (34%), Positives = 59/101 (58%)
 Frame = -2

Query: 320 LAMKMMYILGLSFKKTGIEATVTNRYTGRVIVTGSTFQTSIRRYFENKSVCDXXXXXXXX 141
           + +   Y+L L F    I A V +R  G ++ T S+ +  ++++FE K  C+        
Sbjct: 1   MVLSKPYVLRLFFSHRYITANVVDRNRGHIVATASSIERELKKHFECKRTCNAKAAAVVG 60

Query: 140 XVLARRLTLLGIPEIHSNIQRTLDQGFRYHHKTWKLINAVR 18
            VLA R+ + G+PEI+SN+Q+ L++GF+   K W LIN++R
Sbjct: 61  DVLAMRIKVEGLPEIYSNVQKELNKGFKNRTKIWALINSLR 101


>ref|XP_006851238.1| hypothetical protein AMTR_s00180p00024800 [Amborella trichopoda]
           gi|548854921|gb|ERN12819.1| hypothetical protein
           AMTR_s00180p00024800 [Amborella trichopoda]
          Length = 103

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 34/84 (40%), Positives = 51/84 (60%)
 Frame = -2

Query: 269 IEATVTNRYTGRVIVTGSTFQTSIRRYFENKSVCDXXXXXXXXXVLARRLTLLGIPEIHS 90
           I A V +R  GR++ + S+ + +++  FE    C+         VLA R  + GIPEI+S
Sbjct: 8   ITANVVDRNNGRIVASASSVERALKSGFECGRFCNSKAAAIVGEVLAMRAKVEGIPEIYS 67

Query: 89  NIQRTLDQGFRYHHKTWKLINAVR 18
           NIQ+ LD+GF+ H K W LINA++
Sbjct: 68  NIQKELDKGFKNHTKIWSLINALK 91


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