BLASTX nr result

ID: Ephedra25_contig00018259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00018259
         (996 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26329.1| unknown [Picea sitchensis]                             111   5e-22

>gb|ABK26329.1| unknown [Picea sitchensis]
          Length = 254

 Score =  111 bits (277), Expect = 5e-22
 Identities = 90/275 (32%), Positives = 122/275 (44%), Gaps = 9/275 (3%)
 Frame = +2

Query: 194 MPTSKVHIPGFGVWNQEKDVEISDCFNAAMASRADMQGISHKKKSNGSHENKHGKQIHNS 373
           M   KVHIP FG WN  +DV IS+ F+ A ASR   +G  +    +G    K    IH S
Sbjct: 16  MAPGKVHIPSFGDWNANQDVVISEYFDIARASRVKKEGSGNGYAVSGP---KGQVPIHQS 72

Query: 374 EENHRGRRNSGEVFKIPEKNYAHDPKIRRARHEKTPSKDSKSLIKKTSHEKTPSKDLKSL 553
             N            IPEK         R  H K P          TS     S  L   
Sbjct: 73  GLNSSS---------IPEK---------RGAHTKVP----------TSIRPANSAPLAPR 104

Query: 554 PLNNYQVSQHTSSEGGDGDTQFVRRRRPASISEIP--MPA---QKDTAGFRMPSPLHRKK 718
             + Y V      E        + +R+  S+++I   +P+   +K+  G R PSPL  KK
Sbjct: 105 EQDLYHVKPVAKKE--------IYQRKSKSVTDIVPIVPSNKVRKEFGGSRTPSPLSIKK 156

Query: 719 NDK----NSKVALKKTLPTFGEWDLDDSNNWPMITEIFDEARNERQRSLDGNGTPTHVIR 886
             +    N K   KK LP FG+WDL+D       T IFDEARNE++ ++  + T      
Sbjct: 157 GSEKSSANKKATKKKALPKFGDWDLNDPTGGTPFTAIFDEARNEKKGAMPADKTSLQRNA 216

Query: 887 TKSVEEDLYKPPHLEPKRRKDKLLSYLSNLCGGKV 991
           +  ++EDLYK      K+  +KLLS LS +  GK+
Sbjct: 217 SSPIDEDLYKQQSSSHKKYGEKLLSILSKIFSGKM 251


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