BLASTX nr result
ID: Ephedra25_contig00018086
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00018086
(2737 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004302031.1| PREDICTED: multisubstrate pseudouridine synt... 723 0.0
ref|XP_004302030.1| PREDICTED: multisubstrate pseudouridine synt... 715 0.0
gb|EXB39195.1| Multisubstrate pseudouridine synthase 7 [Morus no... 714 0.0
ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt... 709 0.0
ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synt... 709 0.0
ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Popu... 708 0.0
gb|EMJ09385.1| hypothetical protein PRUPE_ppa020985mg [Prunus pe... 707 0.0
ref|XP_006347775.1| PREDICTED: multisubstrate pseudouridine synt... 706 0.0
gb|EOY11114.1| Pseudouridine synthase family protein isoform 2 [... 706 0.0
ref|XP_004230110.1| PREDICTED: multisubstrate pseudouridine synt... 704 0.0
gb|ESW19147.1| hypothetical protein PHAVU_006G100200g [Phaseolus... 704 0.0
ref|XP_006577278.1| PREDICTED: multisubstrate pseudouridine synt... 701 0.0
ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana] g... 699 0.0
emb|CBI34194.3| unnamed protein product [Vitis vinifera] 696 0.0
ref|XP_004961565.1| PREDICTED: multisubstrate pseudouridine synt... 692 0.0
gb|EOY11113.1| Pseudouridine synthase family protein, putative i... 690 0.0
ref|XP_003568149.1| PREDICTED: pseudouridylate synthase 7 homolo... 689 0.0
ref|XP_006432989.1| hypothetical protein CICLE_v10003382mg [Citr... 688 0.0
ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synt... 688 0.0
ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ric... 687 0.0
>ref|XP_004302031.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform 2
[Fragaria vesca subsp. vesca]
Length = 693
Score = 723 bits (1866), Expect = 0.0
Identities = 385/735 (52%), Positives = 499/735 (67%), Gaps = 29/735 (3%)
Frame = +1
Query: 118 EEADVGILCYTTDVPGFRGILKHRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVV 297
+E++VGI CY + +PGFRGILK RY+DF+VNEVD EGNVV LT L+AP + VK
Sbjct: 4 QESEVGIFCYISPLPGFRGILKQRYSDFMVNEVDMEGNVVHLTNLEAPPEVVK------- 56
Query: 298 KEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISAKDFDDIEPIVLT 477
+N TE + ++ YS +I+ F L S D E+L+ + +++ D + PIVL+
Sbjct: 57 ---ENGAKTEDA---ASKDYSAEIEKFRCLASGEDVERLEAFIREVNSGSEDGVMPIVLS 110
Query: 478 PDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYF-------GKNTEXXXXXX 636
PD DK HR VHNFFK NL FLVTD +DGP+ +KC+R+R G+N++
Sbjct: 111 PDYDKVHRTAVHNFFKENLKFLVTDAVDGPDASSKCIRVRLNSGGQNGRGRNSKK----- 165
Query: 637 XXXXXXXXXXXXXXXXXXXXXXXXYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKENK 810
+ GD+ FDSRG DDW E GKFLRFHL+KENK
Sbjct: 166 --------------------------RKERGDKPFDSRGVDDWSEHVGKFLRFHLFKENK 199
Query: 811 DTQEALNVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLGD 990
DTQEAL VIGKMLG++P+AFG AGTKDKRAVT QRVTVFKQ ASRLA+LN RL GIK+GD
Sbjct: 200 DTQEALGVIGKMLGIQPRAFGFAGTKDKRAVTCQRVTVFKQFASRLAALNDRLIGIKVGD 259
Query: 991 FCYVNAGLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSVG 1170
FCYV GL LGQL GNRFTITLRGV A++E II+ +A+ LGK GFVNYFGLQRFGSGS+
Sbjct: 260 FCYVKEGLSLGQLLGNRFTITLRGVVADSEDIIQASANALGKQGFVNYFGLQRFGSGSIP 319
Query: 1171 THAIGAALLRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAEKA 1350
TH IGA+LLRGEWK+ + ++L+PREGER+ + EAR+YY+ SNDIDGTLR++PR+L+AE+A
Sbjct: 320 THLIGASLLRGEWKSTVSMMLEPREGERDVITEARKYYKESNDIDGTLRKLPRYLVAERA 379
Query: 1351 ILTGLKKDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLVYC 1530
+L LKK P N+ QAL +PR LR+MYVHSYQSYLWNHA++ R+QKYG + VGDLVYC
Sbjct: 380 VLQCLKKCPGNYSQALKAVPRTLRMMYVHSYQSYLWNHAASMRVQKYGTDRVVVGDLVYC 439
Query: 1531 KRPEVTSTQG----EVQNIETSEENAEN--DLETLYESTDSEVFQDNNTEVKVVNSDDIE 1692
K E G E + ++EN ++ D L + +++ V + + VK V ++DI
Sbjct: 440 KGHETEKVTGIVSSECVDENVNDENCDDTFDPNHLDDISETNVPEARVSLVKAVTAEDIN 499
Query: 1693 SGKYAIEDVVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYR 1872
+G Y I+D+VLPLPGS++++PENDIA VFHD+AKKD +SL ES H+VKEFSI N++G YR
Sbjct: 500 NGTYTIDDIVLPLPGSRVIFPENDIAAVFHDLAKKDGISLTESVHNVKEFSITNVTGSYR 559
Query: 1873 RLVQKPIDFTWKIMKYEDPGQTLAETDHDLLQKSLKKDNAPLETPSGIT---MLHDK-DA 2040
R+ QKP+DF W I+KY D L ETD + + K+ K N E P+G++ LHD+
Sbjct: 560 RVFQKPVDFEWDILKYIDGNIPLVETDFEKIAKT-KPVNVNKEYPTGVSGDGSLHDRIKQ 618
Query: 2041 DACS-----LAATDKKCSDKDNSEPSTDTV-----CSSYIALQLAFTLPTSCYATMAIRE 2190
CS L D + + P +++ + IAL+L+FTLP SCYATMAIRE
Sbjct: 619 SECSVNDVQLPKKDNEVESEGEKLPHVESLGGPIPQGTQIALKLSFTLPASCYATMAIRE 678
Query: 2191 LLKTSTSTQYHKSLD 2235
LLKTSTS +HK+L+
Sbjct: 679 LLKTSTSVAFHKTLN 693
>ref|XP_004302030.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform 1
[Fragaria vesca subsp. vesca]
Length = 701
Score = 715 bits (1845), Expect = 0.0
Identities = 382/727 (52%), Positives = 493/727 (67%), Gaps = 29/727 (3%)
Frame = +1
Query: 118 EEADVGILCYTTDVPGFRGILKHRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVV 297
+E++VGI CY + +PGFRGILK RY+DF+VNEVD EGNVV LT L+AP + VK
Sbjct: 4 QESEVGIFCYISPLPGFRGILKQRYSDFMVNEVDMEGNVVHLTNLEAPPEVVK------- 56
Query: 298 KEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISAKDFDDIEPIVLT 477
+N TE + ++ YS +I+ F L S D E+L+ + +++ D + PIVL+
Sbjct: 57 ---ENGAKTEDA---ASKDYSAEIEKFRCLASGEDVERLEAFIREVNSGSEDGVMPIVLS 110
Query: 478 PDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYF-------GKNTEXXXXXX 636
PD DK HR VHNFFK NL FLVTD +DGP+ +KC+R+R G+N++
Sbjct: 111 PDYDKVHRTAVHNFFKENLKFLVTDAVDGPDASSKCIRVRLNSGGQNGRGRNSKK----- 165
Query: 637 XXXXXXXXXXXXXXXXXXXXXXXXYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKENK 810
+ GD+ FDSRG DDW E GKFLRFHL+KENK
Sbjct: 166 --------------------------RKERGDKPFDSRGVDDWSEHVGKFLRFHLFKENK 199
Query: 811 DTQEALNVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLGD 990
DTQEAL VIGKMLG++P+AFG AGTKDKRAVT QRVTVFKQ ASRLA+LN RL GIK+GD
Sbjct: 200 DTQEALGVIGKMLGIQPRAFGFAGTKDKRAVTCQRVTVFKQFASRLAALNDRLIGIKVGD 259
Query: 991 FCYVNAGLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSVG 1170
FCYV GL LGQL GNRFTITLRGV A++E II+ +A+ LGK GFVNYFGLQRFGSGS+
Sbjct: 260 FCYVKEGLSLGQLLGNRFTITLRGVVADSEDIIQASANALGKQGFVNYFGLQRFGSGSIP 319
Query: 1171 THAIGAALLRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAEKA 1350
TH IGA+LLRGEWK+ + ++L+PREGER+ + EAR+YY+ SNDIDGTLR++PR+L+AE+A
Sbjct: 320 THLIGASLLRGEWKSTVSMMLEPREGERDVITEARKYYKESNDIDGTLRKLPRYLVAERA 379
Query: 1351 ILTGLKKDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLVYC 1530
+L LKK P N+ QAL +PR LR+MYVHSYQSYLWNHA++ R+QKYG + VGDLVYC
Sbjct: 380 VLQCLKKCPGNYSQALKAVPRTLRMMYVHSYQSYLWNHAASMRVQKYGTDRVVVGDLVYC 439
Query: 1531 KRPEVTSTQG----EVQNIETSEENAEN--DLETLYESTDSEVFQDNNTEVKVVNSDDIE 1692
K E G E + ++EN ++ D L + +++ V + + VK V ++DI
Sbjct: 440 KGHETEKVTGIVSSECVDENVNDENCDDTFDPNHLDDISETNVPEARVSLVKAVTAEDIN 499
Query: 1693 SGKYAIEDVVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYR 1872
+G Y I+D+VLPLPGS++++PENDIA VFHD+AKKD +SL ES H+VKEFSI N++G YR
Sbjct: 500 NGTYTIDDIVLPLPGSRVIFPENDIAAVFHDLAKKDGISLTESVHNVKEFSITNVTGSYR 559
Query: 1873 RLVQKPIDFTWKIMKYEDPGQTLAETDHDLLQKSLKKDNAPLETPSGIT---MLHDK-DA 2040
R+ QKP+DF W I+KY D L ETD + + K+ K N E P+G++ LHD+
Sbjct: 560 RVFQKPVDFEWDILKYIDGNIPLVETDFEKIAKT-KPVNVNKEYPTGVSGDGSLHDRIKQ 618
Query: 2041 DACS-----LAATDKKCSDKDNSEPSTDTV-----CSSYIALQLAFTLPTSCYATMAIRE 2190
CS L D + + P +++ + IAL+L+FTLP SCYATMAIRE
Sbjct: 619 SECSVNDVQLPKKDNEVESEGEKLPHVESLGGPIPQGTQIALKLSFTLPASCYATMAIRE 678
Query: 2191 LLKTSTS 2211
LLKTSTS
Sbjct: 679 LLKTSTS 685
>gb|EXB39195.1| Multisubstrate pseudouridine synthase 7 [Morus notabilis]
Length = 784
Score = 714 bits (1842), Expect = 0.0
Identities = 371/720 (51%), Positives = 493/720 (68%), Gaps = 20/720 (2%)
Frame = +1
Query: 118 EEADVGILCYTTDVPGFRGILKHRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVV 297
+E+DVGI CY +++PGFRGILK RY+DFIVNEVD +GNVV LT LDAP
Sbjct: 64 DESDVGIFCYISNLPGFRGILKQRYSDFIVNEVDTDGNVVHLTSLDAPP----------- 112
Query: 298 KEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISAKDFDDIEPIVLT 477
E E TE D G + Y+ +I++F L ++DAE L+ L+ +I++ +++ PIVL+
Sbjct: 113 -ETREETRTETIDA-GTKSYTSEIESFRCLAGDSDAESLEALINQINSGGGEEVSPIVLS 170
Query: 478 PDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRY-------FGKNTEXXXXXX 636
P SDK+HR E+HNFFK N FLVTDT+DGP+ +KC+R+R G+N++
Sbjct: 171 PSSDKSHRTEIHNFFKKNFKFLVTDTVDGPDASSKCIRVRLNSGRHNNHGRNSKK----- 225
Query: 637 XXXXXXXXXXXXXXXXXXXXXXXXYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKENK 810
+ GD+ FD RG+DDW E GKFLRFHLYKENK
Sbjct: 226 --------------------------RKERGDKPFDRRGSDDWPEHVGKFLRFHLYKENK 259
Query: 811 DTQEALNVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLGD 990
D+QEAL +IGKMLG++P++FG AGTKDKR+V+TQRVTVFKQRASRLA+LN RL GI++GD
Sbjct: 260 DSQEALGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNDRLIGIQVGD 319
Query: 991 FCYVNAGLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSVG 1170
FCYV LVLGQLSGNRFT+TLRGV A++E IK +A LG+ GF+NYFGLQRFGSGSV
Sbjct: 320 FCYVKEELVLGQLSGNRFTVTLRGVVADSEETIKASASALGRRGFINYFGLQRFGSGSVP 379
Query: 1171 THAIGAALLRGEWKTAIDLILDPREGE--REDVREAREYYRSSNDIDGTLRRMPRHLIAE 1344
T+ IGA L RGEWK A+ +ILDPREG+ + + +AREYY+ +NDIDGTLR++PRHL+AE
Sbjct: 380 TYLIGAMLFRGEWKDAVHMILDPREGDILLDVITKAREYYKETNDIDGTLRQLPRHLVAE 439
Query: 1345 KAILTGLKKDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLV 1524
AIL LKK P N++QAL IPR LR+MYVHSYQSYLWNHA++ R+QKYG + VGDLV
Sbjct: 440 NAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASTRVQKYGTDQVVVGDLV 499
Query: 1525 YCKRPEVTSTQGEVQ-NIETSEENAENDLETLYESTDSEVFQDNNTEVKVVNSDDIESGK 1701
+CK + +G + + + NA + E + +E+ ++ N VKVV ++DI +G
Sbjct: 500 FCKEHNIEKVKGTASADCKDEDSNAIFGSHDIDEVSGAELPEERNNPVKVVAAEDILAGN 559
Query: 1702 YAIEDVVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYRRLV 1881
+AI+DVVLPLPGS+++ P NDIAQV+HD+AKKD++SL ES+H+VKEFSI +++G YRR+
Sbjct: 560 FAIDDVVLPLPGSRVILPTNDIAQVYHDLAKKDAISLTESAHNVKEFSITSMTGSYRRVF 619
Query: 1882 QKPIDFTWKIMKYEDPGQTLAETDHDLLQKSLKKDNAPLETPSG---ITMLHDKDADACS 2052
QKP+D+ W+++ Y + LAETD D++ KS A +G T + +
Sbjct: 620 QKPVDYEWELLTYTNGTIPLAETDLDIIAKSKPAHVAEENEVNGNEESTKRSKRVENEAV 679
Query: 2053 LAATDKKCSDKDNSEPSTDTVCSS-----YIALQLAFTLPTSCYATMAIRELLKTSTSTQ 2217
L D K + +E ++ C + +AL+L+FTLP SCYATMAIRELLKTSTS +
Sbjct: 680 LQTDDNKVDGEREAELQAESTCGTNSQEPQMALKLSFTLPASCYATMAIRELLKTSTSVR 739
>ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Vitis
vinifera]
Length = 694
Score = 709 bits (1831), Expect = 0.0
Identities = 379/726 (52%), Positives = 494/726 (68%), Gaps = 20/726 (2%)
Frame = +1
Query: 118 EEADVGILCYTTDVPGFRGILKHRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVV 297
EE+DVGI Y + +PGFRGILK RY DFIVNEVD +GNVV LT LDAP + +
Sbjct: 5 EESDVGISFYISQLPGFRGILKQRYCDFIVNEVDSDGNVVHLTSLDAPPESM-------- 56
Query: 298 KEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISAKDFDDIEPIVLT 477
E + K ++QS N+ Y+ +I+ F LV ++D E LK L+ ++++ D + PIVL+
Sbjct: 57 -EKNETKISDQS----NKGYASEIELFRSLVGDSDVECLKGLIDQVASGIEDGVSPIVLS 111
Query: 478 PDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYFGKNTEXXXXXXXXXXXXX 657
SDK+HR VHNFFK NL FLVTDTIDGP+T +KC+R+R +
Sbjct: 112 SSSDKSHRTAVHNFFKENLKFLVTDTIDGPDTSSKCIRVRLNSGGSHNNGRNSRKRKDRR 171
Query: 658 XXXXXXXXXXXXXXXXXYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKENKDTQEALN 831
D+ FDSRG+D+W E GKFLRFHLYKENKDTQEA+
Sbjct: 172 ------------------------DKPFDSRGSDNWSEHVGKFLRFHLYKENKDTQEAIG 207
Query: 832 VIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLGDFCYVNAG 1011
+IGKMLG++P++FG AGTKDKR+V+TQRVTVFKQ A+RLA+LN RL GIK+GDFC+V G
Sbjct: 208 LIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHANRLAALNERLIGIKVGDFCHVREG 267
Query: 1012 LVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSVGTHAIGAA 1191
LVLGQL GNRFTITLRGV A++E IK +AD LG+ GF+NYFGLQRFGSGSV TH IGAA
Sbjct: 268 LVLGQLLGNRFTITLRGVVADSEETIKASADALGRLGFINYFGLQRFGSGSVPTHLIGAA 327
Query: 1192 LLRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAEKAILTGLKK 1371
LLRGEW+TA+ LILDPREGER+ +R+AREYY+ S+DI+GTLR+ PRHL+AE+AIL LKK
Sbjct: 328 LLRGEWETAVSLILDPREGERDAIRKAREYYKESDDIEGTLRQFPRHLVAERAILQCLKK 387
Query: 1372 DPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLVYCKRPEVTS 1551
P N++QAL IPR LR+MYVHSYQSYLWNHA++ R+Q YG K + +GDLVYCK
Sbjct: 388 YPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGTKQVVLGDLVYCKGDNAEK 447
Query: 1552 TQGEVQNIETSEENAENDLETLY--ESTDSEVFQDNNTEVKVVNSDDIESGKYAIEDVVL 1725
V N E ++ + ++ + E +++++ ++ N VK ++++D+ +G Y I+DVVL
Sbjct: 448 VT-RVVNSEFDDDGCSDAFDSSHFDEISETDLPEERNDPVKALDAEDLLTGNYTIDDVVL 506
Query: 1726 PLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYRRLVQKPIDFTW 1905
PLPGS+ +YP NDIAQV+HD AKKD++SL ES+H VKEFSI N++GG+RR+ QKPIDF W
Sbjct: 507 PLPGSRAIYPTNDIAQVYHDFAKKDAISLTESAHSVKEFSITNMTGGFRRVFQKPIDFEW 566
Query: 1906 KIMKYEDPGQTLAETDHDLLQKSLKKDN--APLETPSGITMLHDKDADACSLAATDKKCS 2079
+++ Y + LAETD D + KS K N ++ +G + S +
Sbjct: 567 ELLTYTEGNIPLAETDWDKITKS-KPSNIIGGEDSRNGNEKENSFQCMKQSESFEHNVNL 625
Query: 2080 DKDNSEPSTDT--------------VCSSYIALQLAFTLPTSCYATMAIRELLKTSTSTQ 2217
DN+EP+ T + AL+L+FTLP SCYATMAIRELLKTSTS
Sbjct: 626 STDNNEPNGVTEIGLPQVEPQFESGAPEAQRALKLSFTLPASCYATMAIRELLKTSTSVA 685
Query: 2218 YHKSLD 2235
+ K+L+
Sbjct: 686 FQKTLN 691
>ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
[Citrus sinensis]
Length = 739
Score = 709 bits (1829), Expect = 0.0
Identities = 370/733 (50%), Positives = 500/733 (68%), Gaps = 27/733 (3%)
Frame = +1
Query: 118 EEADVGILCYTTDVPGFRGILKHRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVV 297
+E+D GILC+ +++PGFRGILK RY DFIVNEVD + VV LT LD P +E
Sbjct: 49 DESDAGILCFISNLPGFRGILKQRYCDFIVNEVDTDRKVVHLTSLDVPPEEA-------- 100
Query: 298 KEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRI-SAKDFDDIEPIVL 474
A T+ SD L N Y+ +I++F L ++DA+ L+ L+ ++ S K+ D I PIVL
Sbjct: 101 --AVEHNETKASDQL-NRSYASEIESFRSLAGDSDAQCLETLINQVTSGKNEDSIPPIVL 157
Query: 475 TPDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRY--------FGKNTEXXXX 630
+ +SDK+HR +HNFFK N FLVTDT+DGP+ +KC+R+R G+N++
Sbjct: 158 SANSDKSHRTAIHNFFKDNFKFLVTDTVDGPDASSKCIRVRLNSGGNNNSMGRNSKK--- 214
Query: 631 XXXXXXXXXXXXXXXXXXXXXXXXXXYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKE 804
+ GD FDSRG+++W E GKFLRFHLYKE
Sbjct: 215 ----------------------------RKERGDNPFDSRGSENWPEQLGKFLRFHLYKE 246
Query: 805 NKDTQEALNVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKL 984
NKDTQEAL +I KMLG+ P++FG AGTKDKR+V+TQRVTVFKQRAS+LA+LN RL GI+L
Sbjct: 247 NKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQRASKLAALNKRLIGIRL 306
Query: 985 GDFCYVNAGLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGS 1164
GDFCYV GL+LGQL GNRFTITLRGV ++E +IK +A+ LG+NGF+NYFGLQRFGSGS
Sbjct: 307 GDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLGRNGFINYFGLQRFGSGS 366
Query: 1165 VGTHAIGAALLRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAE 1344
V TH +GA LLRGEWK+A+ +ILDPREGER ++ +AREYY+ ++DIDGTLR++PRHL+AE
Sbjct: 367 VPTHLVGATLLRGEWKSAVKMILDPREGERNEISKAREYYKETDDIDGTLRKLPRHLVAE 426
Query: 1345 KAILTGLKKDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLV 1524
+AIL LKK P N++QAL IPR LR+MYVHSYQS+LWNHA++AR+QK+G + + VGDLV
Sbjct: 427 RAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLV 486
Query: 1525 YCKRPEVTSTQGEVQ-NIETSEENAENDLETLYESTDSEVFQDNNTEVKVVNSDDIESGK 1701
+CK + G V E N +D L E +++ + VK V ++DI SGK
Sbjct: 487 FCKGDDTEKELGCVNPEFEYESSNDADDSSHLDEVPETDHPDGRHNLVKTVTAEDINSGK 546
Query: 1702 YAIEDVVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYRRLV 1881
Y I+DVVLPLPGS+++YP ND+A+V+H +A+KD ++L ES H+VKEFSI +++G YRR+
Sbjct: 547 YTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLTESLHNVKEFSITSMTGNYRRVF 606
Query: 1882 QKPIDFTWKIMKYEDPGQTLAETDHDLLQKS-----LKKDNA----PLETPSGITMLHDK 2034
QKP+DF W+++ Y D + LAETD D + K +K++ A + PS +
Sbjct: 607 QKPMDFEWELLTYIDGNKPLAETDLDKIAKDKLANIVKEEEAVCGNKKKDPSDCMKQSES 666
Query: 2035 DADACSLAATDKKCS-DKDNSEPSTDTVCSS-----YIALQLAFTLPTSCYATMAIRELL 2196
+ L+ + + + K+ +P ++VC + +AL+L TLP+SCYATMAIRELL
Sbjct: 667 LSKDIKLSTENNEAACAKEVKQPHVESVCGADSQGKQMALKLGLTLPSSCYATMAIRELL 726
Query: 2197 KTSTSTQYHKSLD 2235
KTSTS +HK+L+
Sbjct: 727 KTSTSVAFHKTLN 739
>ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Populus trichocarpa]
gi|550338143|gb|ERP60572.1| hypothetical protein
POPTR_0005s05300g [Populus trichocarpa]
Length = 752
Score = 708 bits (1827), Expect = 0.0
Identities = 371/735 (50%), Positives = 504/735 (68%), Gaps = 29/735 (3%)
Frame = +1
Query: 118 EEADVGILCYTTDVPGFRGILKHRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVV 297
EE+DVGILCY + +PGFRGILK RY DFIVNEVD +GNVV LTCL+ P + V+ ++
Sbjct: 56 EESDVGILCYISQLPGFRGILKQRYADFIVNEVDTDGNVVHLTCLEPPPQMVEETKECGA 115
Query: 298 KEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISA--KDFDDIEPIV 471
K +D + S +S Y +I+ F L ++DAEKL+ L+ ++ + D + IV
Sbjct: 116 KVSDEKMSESKS-------YEAEIELFRSLAGDSDAEKLESLISQVDSCTGSEDSVPHIV 168
Query: 472 LTPDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYF-------GKNTEXXXX 630
L+PDSDK HR VHNFFK N FLVTDT DGP+ +KC+R+R G+N++
Sbjct: 169 LSPDSDKTHRTAVHNFFKQNFKFLVTDTTDGPDASSKCIRVRLDSGGHKNNGRNSKK--- 225
Query: 631 XXXXXXXXXXXXXXXXXXXXXXXXXXYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKE 804
+ G++ FDSRG+ +W E GKFLRFHLYKE
Sbjct: 226 ----------------------------RKERGEKPFDSRGSSNWPEHLGKFLRFHLYKE 257
Query: 805 NKDTQEALNVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKL 984
NKDTQEAL +IGKMLG++ K+FG AGTKDKRAV+TQRVTVFKQ+ASRLA+LN RL GIK+
Sbjct: 258 NKDTQEALGIIGKMLGIQSKSFGFAGTKDKRAVSTQRVTVFKQQASRLAALNDRLIGIKV 317
Query: 985 GDFCYVNAGLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGS 1164
GDFC+V GL+LG+L GNRFT+TLRGV A++E IK AAD LG++GF+NYFGLQRFG+GS
Sbjct: 318 GDFCHVKEGLLLGRLLGNRFTVTLRGVIADSEDTIKAAADSLGRHGFINYFGLQRFGTGS 377
Query: 1165 VGTHAIGAALLRGEWKTAIDLILDPREGE-----REDVREAREYYRSSNDIDGTLRRMPR 1329
V TH IGAALLRGEWKTA+ +ILDPREG+ +R+AREYY+ SNDI+GTLR++PR
Sbjct: 378 VPTHLIGAALLRGEWKTAVSMILDPREGDILLLFPYVIRKAREYYKESNDIEGTLRQLPR 437
Query: 1330 HLIAEKAILTGLKKDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIA 1509
HL+AE+A+L LKK P +++QA+ IPR LR+MYVH YQSYLWNHA++ R+QKYG +
Sbjct: 438 HLVAERAVLQCLKKCPGDYLQAMKAIPRTLRMMYVHGYQSYLWNHAASERVQKYGFDQVL 497
Query: 1510 VGDLVYCKRPEVTSTQGEVQNIETSEENAEN--DLETLYESTDSEVFQDNNTEVKVVNSD 1683
+GDLVYCK + V N E +++N ++ D L E++ +++ + NT VKVV +
Sbjct: 498 LGDLVYCKGDDSEKETVGV-NSECNDDNCDDTYDCSHLDETSGTDLLERKNTLVKVVTVE 556
Query: 1684 DIESGKYAIEDVVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISG 1863
D+ +G Y ++DVVLP+PGS++++P N+IA+V+HD+AKKD+++L ES H VKEFSI +++G
Sbjct: 557 DMSTGNYTVDDVVLPMPGSRVIFPTNEIAKVYHDLAKKDAINLTESVHRVKEFSITSMTG 616
Query: 1864 GYRRLVQKPIDFTWKIMKYEDPGQTLAETDHDLLQKSLKKDNAPLETP---------SGI 2016
YRR+ QKP+DF W+++ Y D + LAETD D + K+ + E S
Sbjct: 617 SYRRVFQKPLDFEWELLTYNDSNKPLAETDLDKISKTGSTNIIKQEEQGKGDEDNDLSDC 676
Query: 2017 TMLHDKDADACSLAATDKKCSDK--DNSEPSTDTVCSSYIALQLAFTLPTSCYATMAIRE 2190
T L ++ +L++ + S++ ++ + S + +AL+L+ TLP SCYATMAIRE
Sbjct: 677 TKLPVCSRNSIALSSDTNEESEREVESEQVSGSNWQETQMALKLSLTLPASCYATMAIRE 736
Query: 2191 LLKTSTSTQYHKSLD 2235
LLKTSTS YHK+L+
Sbjct: 737 LLKTSTSVAYHKTLN 751
>gb|EMJ09385.1| hypothetical protein PRUPE_ppa020985mg [Prunus persica]
Length = 691
Score = 707 bits (1825), Expect = 0.0
Identities = 383/721 (53%), Positives = 484/721 (67%), Gaps = 23/721 (3%)
Frame = +1
Query: 118 EEADVGILCYTTDVPGFRGILKHRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVV 297
EE DVGI CY + +PGFRGILK RY+DF+VNEVD E NVV LT LDAP + VK
Sbjct: 5 EEPDVGIFCYISQLPGFRGILKQRYSDFMVNEVDTEENVVHLTNLDAPAETVK------- 57
Query: 298 KEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISAKDFDDIEPIVLT 477
E T+ D + Y+ +I++F LV DAE+L+ ++ +I++ D I PIVL+
Sbjct: 58 -----EIETKTHDATSKD-YTTEIESFRSLVDPDDAERLEAIINQINSGSEDSILPIVLS 111
Query: 478 PDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYF--GKNTEXXXXXXXXXXX 651
PD DK+HR VHNFFK N FLVTDT+DGP+ +KC+R+R G+N+
Sbjct: 112 PDYDKSHRTAVHNFFKENFKFLVTDTVDGPDASSKCIRVRINSGGQNSRGRNSRK----- 166
Query: 652 XXXXXXXXXXXXXXXXXXXYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKENKDTQEA 825
+ GD+ FDSRG+DDW E GKFLRFHLYKENKDTQEA
Sbjct: 167 ---------------------RKERGDKPFDSRGSDDWSENVGKFLRFHLYKENKDTQEA 205
Query: 826 LNVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLGDFCYVN 1005
L +I KMLG++P++FG AGTKDKRAVTTQRVTVFKQ ASRLA+LN RL GIK+GDFCYV
Sbjct: 206 LGIIAKMLGIQPRSFGFAGTKDKRAVTTQRVTVFKQLASRLAALNDRLIGIKVGDFCYVK 265
Query: 1006 AGLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSVGTHAIG 1185
GLVLGQL GNRFTITLRGV A++E IK + LGK GF+NYFGLQRFGSGSV TH IG
Sbjct: 266 EGLVLGQLLGNRFTITLRGVVADSEDTIKASVIALGKQGFINYFGLQRFGSGSVPTHLIG 325
Query: 1186 AALLRGEWKTAIDLILDPREGE--REDVREAREYYRSSNDIDGTLRRMPRHLIAEKAILT 1359
A LLRGEWK+ + L LDPREG+ + AREYY+ +NDI+GTLR++PRHL++EKAIL
Sbjct: 326 ATLLRGEWKSTVSLFLDPREGDILLMLLGIAREYYKETNDIEGTLRQLPRHLVSEKAILQ 385
Query: 1360 GLKKDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLVYCKRP 1539
LKK P N++QAL IPR LR+MYVHSYQSYLWNHA++ R+QKYG + +GDLVYCK
Sbjct: 386 CLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGTDRVVLGDLVYCKGN 445
Query: 1540 EVTSTQGEVQNIETSEENAENDLE--TLYESTDSEVFQDNNTEVKVVNSDDIESGKYAIE 1713
E T EV + + +EN + L+ L + + + + ++ VK V ++DI SG Y I+
Sbjct: 446 E-TEKVSEVVSSKCVDENGNDTLDPIDLDDISGTNLPEERLNLVKAVTAEDILSGNYTID 504
Query: 1714 DVVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYRRLVQKPI 1893
DVVLP+PGS++++PENDIA VFHD+AKKD++SL ES H+VKEFSI +++G YRR+ QKP+
Sbjct: 505 DVVLPMPGSRVIFPENDIAHVFHDLAKKDAISLTESVHNVKEFSITSMTGSYRRVFQKPM 564
Query: 1894 DFTWKIMKYEDPGQTLAETDHDLLQK----SLKKDNAPLETPSGITMLHDKDADA----- 2046
DF W+I+KY D + L +TD D + K SL +D LHDK +
Sbjct: 565 DFEWEILKYIDGNKPLVDTDFDKIAKTKPSSLNEDG----------RLHDKTKQSECLDN 614
Query: 2047 -CSLAATDKKCSDKDNSEPSTDTVC-----SSYIALQLAFTLPTSCYATMAIRELLKTST 2208
L D K P +++C + AL+L+FTLP SCYATMAIRELLKTST
Sbjct: 615 DIGLQTDDNGAKAKGEELPQAESLCDTNPQETQTALKLSFTLPASCYATMAIRELLKTST 674
Query: 2209 S 2211
S
Sbjct: 675 S 675
>ref|XP_006347775.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Solanum
tuberosum]
Length = 685
Score = 706 bits (1822), Expect = 0.0
Identities = 378/721 (52%), Positives = 487/721 (67%), Gaps = 14/721 (1%)
Frame = +1
Query: 118 EEADVGILCYTTDVPGFRGILKHRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVV 297
+E+DVGI CY +++PGFRGILK RY+DFIVNEVD + NVV LT L+AP
Sbjct: 5 DESDVGISCYISNLPGFRGILKQRYSDFIVNEVDLDENVVHLTLLEAP------------ 52
Query: 298 KEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRI-SAKDFDDIEPIVL 474
KE K SD L N Y +I++F L +DA+KLK + + S D D E IVL
Sbjct: 53 KECSENKDVNISDQL-NRSYVTEIESFRSLAGNSDADKLKAFIDELNSGADVSD-ESIVL 110
Query: 475 TPDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYFGKNTEXXXXXXXXXXXX 654
+P SDK+HR +HNFFK L FLVTDTIDG E Q+KCVR+R
Sbjct: 111 SPSSDKSHRTAIHNFFKERLKFLVTDTIDGVEDQSKCVRVRLNNDRNNGRGRSSRK---- 166
Query: 655 XXXXXXXXXXXXXXXXXXYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKENKDTQEAL 828
D+ +DSRG+D W GKFLRFHL+KENKDTQEAL
Sbjct: 167 --------------------RKDRDDKRYDSRGSDSWPGHLGKFLRFHLFKENKDTQEAL 206
Query: 829 NVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLGDFCYVNA 1008
NVI KMLG++ ++FG AGTKDKRAV+TQRVTVFKQ+AS+LA+LN RL GIK+GDFC+V
Sbjct: 207 NVIAKMLGVQLRSFGFAGTKDKRAVSTQRVTVFKQQASKLAALNKRLIGIKVGDFCHVKE 266
Query: 1009 GLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSVGTHAIGA 1188
GL+LGQL GNRFTITLRGV+AE+E IIK +A LGK+GF+NYFGLQRFGS SV TH IGA
Sbjct: 267 GLLLGQLYGNRFTITLRGVSAESEDIIKASAVALGKHGFINYFGLQRFGSSSVPTHLIGA 326
Query: 1189 ALLRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAEKAILTGLK 1368
ALLRGEWK A+ LILDPREGE+ + REYY+ S DIDGTLR++PR+L+AEKAIL LK
Sbjct: 327 ALLRGEWKAAVSLILDPREGEKNAISTVREYYKESGDIDGTLRQLPRYLVAEKAILQCLK 386
Query: 1369 KDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLVYCKRPEVT 1548
+ P N++QAL IPR LR+MYVHSYQSYLWNHA++ R+QK+G + +GDLVY K E
Sbjct: 387 RSPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKHGFDQVVLGDLVYSKE-EYK 445
Query: 1549 STQGEVQNIETSEENAENDLETLYESTDSEVFQDNNTEVKVVNSDDIESGKYAIEDVVLP 1728
+ V E +N +D L E +++++ ++ N VKV+N +D++SG YAI+DV+LP
Sbjct: 446 VKESFVAECEDVNDNNMDDYSNLDEISETDLPEERNIPVKVINEEDLKSGTYAIDDVLLP 505
Query: 1729 LPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYRRLVQKPIDFTWK 1908
LPGS+++YP NDI +V+ D+A+KD +SL E++H +KEFSI N++G YRR+ QKP DF W+
Sbjct: 506 LPGSRVIYPSNDIGEVYCDLAQKDDISLTETAHKIKEFSITNMTGAYRRVFQKPKDFEWE 565
Query: 1909 IMKYEDPGQTLAETDHDLLQKSLKKDNAPLETPSGITMLHDKDADACSLAA---TDKKCS 2079
++ Y D LAETD D++ S+ K E P+ + D+ A S+ + K C
Sbjct: 566 LLSYTDGTIPLAETDFDVIANSV-KSKVREEDPTNGSKELPADSSAISVGGDMLSGKVCE 624
Query: 2080 DKDNSEPSTDTVCS--------SYIALQLAFTLPTSCYATMAIRELLKTSTSTQYHKSLD 2235
+K N+E + S S +AL+L+FTLP SCYATMA+RELLKTSTS +HKSL+
Sbjct: 625 EKINNEAGMQSEKSQSGGNAEESQMALKLSFTLPASCYATMAVRELLKTSTSVAFHKSLN 684
Query: 2236 N 2238
+
Sbjct: 685 D 685
>gb|EOY11114.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
Length = 732
Score = 706 bits (1821), Expect = 0.0
Identities = 371/723 (51%), Positives = 484/723 (66%), Gaps = 18/723 (2%)
Frame = +1
Query: 121 EADVGILCYTTDVPGFRGILKHRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVVK 300
E+DVGILC+ + +PGFRGILK RY+DFIVNEVD EGNVV LT LDAP
Sbjct: 48 ESDVGILCFISHLPGFRGILKQRYSDFIVNEVDTEGNVVHLTSLDAPP------------ 95
Query: 301 EADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISAKDFDDIEPIVLTP 480
EA E T+ D L N+ Y+ +I F L + DA++L+ + +I++ +DI PIVL+P
Sbjct: 96 EAVQEGETKTPDQL-NKCYASEIIKFRSLAGDTDADRLEAFINQITSGSEEDICPIVLSP 154
Query: 481 DSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYFGKNTEXXXXXXXXXXXXXX 660
DSDK+HR +HNFFK NL FLVTDT+DGP++ +KC+R+R N
Sbjct: 155 DSDKSHRTAMHNFFKENLRFLVTDTVDGPDSSSKCIRVRLNSGNNNKGRNSKK------- 207
Query: 661 XXXXXXXXXXXXXXXXYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKENKDTQEALNV 834
+ GD+ +DSRG+ W E GKFLRFHLYKENKDTQEAL +
Sbjct: 208 ------------------RKERGDKPYDSRGSSHWPEHLGKFLRFHLYKENKDTQEALGL 249
Query: 835 IGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLGDFCYVNAGL 1014
IGKMLG++P++FG AGTKDKR+V+TQRVTVFKQ ASRLA+LN RL GIK+GDFCYV
Sbjct: 250 IGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLAALNERLIGIKVGDFCYVKDDF 309
Query: 1015 VLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSVGTHAIGAAL 1194
+LGQL GNRFTI LRG+ A++E IK + + LG++GF+NYFGLQRFGSGS+ TH IGA L
Sbjct: 310 LLGQLLGNRFTIILRGIVADSEETIKASVESLGRHGFINYFGLQRFGSGSIPTHRIGATL 369
Query: 1195 LRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAEKAILTGLKKD 1374
LRGEW+ A ILDPREGER+ V +AREYY+ + DI+GTLR++PRHL+AE+A+L LKK
Sbjct: 370 LRGEWQAAASTILDPREGERDFVSKAREYYKETGDIEGTLRQLPRHLVAERAMLQCLKKC 429
Query: 1375 PSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLVYCKRPEVTST 1554
P N++QAL IPR LR+MYVHSYQSYLWNHA++ R++KYG+ + +GDLVYCK +
Sbjct: 430 PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVEKYGSNEVVLGDLVYCKGNDAEKV 489
Query: 1555 QGEVQNIETSEENAENDLETLYESTDSEVFQDNNTEVKVVNSDDIESGKYAIEDVVLPLP 1734
+ E + D L E + +++ + N VK + + DI +G Y IEDVVLP+P
Sbjct: 490 KVVPSEHEDNNFEDAYDCSQLDEISGTDLPEGKNNLVKAITAADISTGNYTIEDVVLPMP 549
Query: 1735 GSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYRRLVQKPIDFTWKIM 1914
GS+I+YP NDIA V+HDMAKKD +SL ES H++KEFSI +++G YRR+ QKPIDF W+++
Sbjct: 550 GSRIIYPVNDIANVYHDMAKKDGISLTESVHNIKEFSITSMTGSYRRVFQKPIDFEWELL 609
Query: 1915 KYEDPGQTLAETDHDLLQKSLKKDNAPLETPSGITMLHDKD--ADACSLAATDKKCSDKD 2088
Y D L+ETD D + K+ + E P+ T D + DKK S +
Sbjct: 610 SYTDGSIALSETDLDKIAKTKPVNLVKEEKPTDGTEGQDSSDHMEHIESFEDDKKFSTGN 669
Query: 2089 --------------NSEPSTDTVCSSYIALQLAFTLPTSCYATMAIRELLKTSTSTQYHK 2226
+S P ++++ + AL+LAFTLP SCYATMAIRELLKTSTS +HK
Sbjct: 670 VEVEGSREAEPPQIHSLPESNSL-GTQKALKLAFTLPASCYATMAIRELLKTSTSVAFHK 728
Query: 2227 SLD 2235
+L+
Sbjct: 729 TLN 731
>ref|XP_004230110.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Solanum
lycopersicum]
Length = 685
Score = 704 bits (1818), Expect = 0.0
Identities = 376/721 (52%), Positives = 485/721 (67%), Gaps = 14/721 (1%)
Frame = +1
Query: 118 EEADVGILCYTTDVPGFRGILKHRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVV 297
+E+DVGI CY +++PGFRGILK RY+DFIVNEVD + NVV L L+AP
Sbjct: 5 DESDVGISCYISNLPGFRGILKQRYSDFIVNEVDLDENVVHLNSLEAP------------ 52
Query: 298 KEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRI-SAKDFDDIEPIVL 474
KE K SD L N Y +I++F L +DA+KLK + + S D D E IVL
Sbjct: 53 KECSENKDVNISDQL-NRSYVTEIESFRSLAGNSDADKLKAFIDELNSGADVSD-ESIVL 110
Query: 475 TPDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYFGKNTEXXXXXXXXXXXX 654
+P SDK+HR E+HNFFK L FLVTDTIDG E Q+KCVR+R
Sbjct: 111 SPSSDKSHRTEIHNFFKERLKFLVTDTIDGVEDQSKCVRVRLNNDRNNGRGRYSRK---- 166
Query: 655 XXXXXXXXXXXXXXXXXXYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKENKDTQEAL 828
D+ +DSRG+D W GKFLRFHL+KENKDTQEAL
Sbjct: 167 --------------------RKDRNDKRYDSRGSDSWPGHLGKFLRFHLFKENKDTQEAL 206
Query: 829 NVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLGDFCYVNA 1008
NVI KMLG++ ++FG AGTKDKRAV+TQRVTVFKQ+AS+LA+LN RL GIK+GDFC+V
Sbjct: 207 NVIAKMLGVQLRSFGFAGTKDKRAVSTQRVTVFKQQASKLAALNKRLIGIKVGDFCHVKE 266
Query: 1009 GLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSVGTHAIGA 1188
GL+LGQL GNRFTITLRGV+AE+E IIK +A LGK+GF+NYFGLQRFGS SV TH IGA
Sbjct: 267 GLLLGQLYGNRFTITLRGVSAESEDIIKASAVALGKHGFINYFGLQRFGSSSVPTHLIGA 326
Query: 1189 ALLRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAEKAILTGLK 1368
ALLRGEWK A+ LILDPREGE+ + REYY+ S DIDGTLR++PR+L+AEKAIL LK
Sbjct: 327 ALLRGEWKAAVSLILDPREGEKNTISTVREYYKESGDIDGTLRQLPRYLVAEKAILQSLK 386
Query: 1369 KDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLVYCKRPEVT 1548
+ P N++QAL IPR LR+MYVHSYQSYLWNHA++ R+QK+G + +GDLVY K +
Sbjct: 387 RSPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKHGFDQVVLGDLVYSKE-DYK 445
Query: 1549 STQGEVQNIETSEENAENDLETLYESTDSEVFQDNNTEVKVVNSDDIESGKYAIEDVVLP 1728
+ V E +N +D L E +++++ ++ N VKV+N +D++SG Y I+DV+LP
Sbjct: 446 VKESFVAECEDVNDNNMDDYSNLDEISETDLPEERNIPVKVINEEDLKSGTYTIDDVLLP 505
Query: 1729 LPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYRRLVQKPIDFTWK 1908
L GS+++YP NDI +V+ D+A+KD +SL E++H +KEFSI N++G YRR+ QKP DF W+
Sbjct: 506 LSGSRVIYPSNDIGEVYRDLAQKDGISLTETAHKIKEFSITNMTGAYRRVFQKPKDFEWE 565
Query: 1909 IMKYEDPGQTLAETDHDLLQKSLKKDNAPLETPSGITMLHDKDADACSLAA---TDKKCS 2079
++ Y D LAETD D++ KS+ K E PS + D+ A S+ + K C
Sbjct: 566 LLSYTDGTIPLAETDFDVIAKSV-KSKVIEEVPSNGSKELPADSSAISVGGDMLSGKVCE 624
Query: 2080 DKDNSEPSTDTVCS--------SYIALQLAFTLPTSCYATMAIRELLKTSTSTQYHKSLD 2235
+ N+E + S S +AL+L+FTLP SCYATMA+RELLKTSTS +HKSL+
Sbjct: 625 ETINNEAGMQSEKSQSGGNAEESQMALKLSFTLPASCYATMAVRELLKTSTSVAFHKSLN 684
Query: 2236 N 2238
+
Sbjct: 685 D 685
>gb|ESW19147.1| hypothetical protein PHAVU_006G100200g [Phaseolus vulgaris]
Length = 691
Score = 704 bits (1817), Expect = 0.0
Identities = 370/727 (50%), Positives = 496/727 (68%), Gaps = 21/727 (2%)
Frame = +1
Query: 118 EEADVGILCYTTDVPGFRGILKHRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVV 297
EE +VGI C+ +D+PGFRGILK RY+DFIVNEVD +G VV+L+ LDAP++E+++ Q
Sbjct: 7 EEDEVGISCFISDLPGFRGILKQRYSDFIVNEVDRDGAVVQLSSLDAPEEELESVQ---- 62
Query: 298 KEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISAKDFDDIEPIVLT 477
E T SD + + Y+ +I+AF+ L E DA L+ + +I+A + PIVL+
Sbjct: 63 -----ENGTNTSDTVVS--YASRIEAFKILAGEPDAILLEEFVNKINAGGEVSVSPIVLS 115
Query: 478 PDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYF-------GKNTEXXXXXX 636
PDSDK+HR VHNFFK N FLVTD +DGP+ KC+R+R GKN++
Sbjct: 116 PDSDKSHRKAVHNFFKENFKFLVTDVVDGPDASLKCIRVRLNSAEPNNKGKNSKK----- 170
Query: 637 XXXXXXXXXXXXXXXXXXXXXXXXYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKENK 810
+ GD+ FDSRG+++W E GKFLRFH+YKENK
Sbjct: 171 --------------------------RKERGDKPFDSRGSENWPENVGKFLRFHIYKENK 204
Query: 811 DTQEALNVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLGD 990
DT EAL VIG MLG++PK+FG AGTKDKRAVTTQRVTV+KQRASRLASLN RL+GIKLGD
Sbjct: 205 DTHEALGVIGNMLGIQPKSFGFAGTKDKRAVTTQRVTVYKQRASRLASLNKRLFGIKLGD 264
Query: 991 FCYVNAGLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSVG 1170
FCYV GL LGQL GNRFTITLRG+ +++E IIK +AD LG+ GF+NYFGLQRFGSGS+
Sbjct: 265 FCYVKEGLCLGQLMGNRFTITLRGIVSDSEDIIKASADALGRLGFINYFGLQRFGSGSLP 324
Query: 1171 THAIGAALLRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAEKA 1350
TH IGAALLRGEWK A+D+ILDPREGER + +AR+YY+ +ND+ GTL+++PR+L+AE+A
Sbjct: 325 THLIGAALLRGEWKLAVDMILDPREGERSAIAKARKYYKENNDVVGTLKQLPRYLVAERA 384
Query: 1351 ILTGLKKDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLVYC 1530
+L LK P N++QAL IPR LRL+Y+HSYQSYLWNHA++ R+QKYG + + +GDLV C
Sbjct: 385 VLQSLKTSPGNYLQALKSIPRTLRLLYIHSYQSYLWNHAASKRVQKYGTEQVVLGDLVNC 444
Query: 1531 KRPEVTSTQGEVQNIETSEENAENDLETLYESTDSEVFQDNNTEVKVVNSDDIESGKYAI 1710
K T+ E E E+ + + ++ +D N+ VKVV+++D+ SG Y I
Sbjct: 445 KE-NSTAKITEFVGSEYPEDCSGGYDSSNQNEISVDIHEDINSCVKVVDAEDLNSGCYTI 503
Query: 1711 EDVVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYRRLVQKP 1890
+DV+LP+PGS++ YP N IA V+ D+AKKD +SL ES H+V+EFSI +I+G YRR+ QKP
Sbjct: 504 DDVILPMPGSRVKYPTNHIANVYEDLAKKDGISLTESVHNVEEFSITSITGCYRRVFQKP 563
Query: 1891 IDFTWKIMKYEDPGQTLAETDHDLLQKSLKKDNA-PLETPSGIT------MLHDKDADAC 2049
I+F W+++ Y D + L ETD + + KS + P++ +G T + + +D
Sbjct: 564 INFEWELLTYSDSNKQLVETDLEKINKSAPTNTVKPIDVGNGKTEEAFDCIREFESSDDF 623
Query: 2050 SLAATDKKCSDKDNSEPSTDTVC-----SSYIALQLAFTLPTSCYATMAIRELLKTSTST 2214
K + ++ P +++C S+ AL+L+FTLP SCYATMAIRELLKTSTS
Sbjct: 624 PKVENFKDIAGEEVKLPHGESLCDSSSQDSHTALKLSFTLPASCYATMAIRELLKTSTSV 683
Query: 2215 QYHKSLD 2235
YHK+L+
Sbjct: 684 AYHKTLN 690
>ref|XP_006577278.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Glycine max]
Length = 690
Score = 701 bits (1808), Expect = 0.0
Identities = 372/735 (50%), Positives = 500/735 (68%), Gaps = 28/735 (3%)
Frame = +1
Query: 115 AEEADVGILCYTTDVPGFRGILKHRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAV 294
AEE +VGI C+ +D+PGFRGILK RY+DFIVNEVD +G VV+L+ LDAP +E ++SQ
Sbjct: 6 AEEHEVGISCFISDLPGFRGILKQRYSDFIVNEVDRDGTVVQLSSLDAPQEEPESSQ--- 62
Query: 295 VKEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISAKDFDDIEPIVL 474
E T SD + + Y+ QI++F+ L ++DA L+ + +I+A D + PIVL
Sbjct: 63 ------ENGTNTSDNVVS--YASQIESFKSLAGDSDAVLLEEFINKINAGGEDGVSPIVL 114
Query: 475 TPDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYF-------GKNTEXXXXX 633
+PDSDK+HR +HNFFK N FLVTD +DGP+ +KC+R+R GKN++
Sbjct: 115 SPDSDKSHRKAMHNFFKENFKFLVTDVVDGPDASSKCIRVRLNSAEPNNKGKNSKK---- 170
Query: 634 XXXXXXXXXXXXXXXXXXXXXXXXXYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKEN 807
+ GD+ FDSRG+++W + GKFLRFHLYKEN
Sbjct: 171 ---------------------------RKERGDKPFDSRGSENWPKNVGKFLRFHLYKEN 203
Query: 808 KDTQEALNVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLG 987
KDT EAL VIG ML ++PK+FG AGTKDKRAVTTQRVTV+KQRASRLASLN RL+GIKLG
Sbjct: 204 KDTHEALGVIGNMLSVQPKSFGFAGTKDKRAVTTQRVTVYKQRASRLASLNKRLFGIKLG 263
Query: 988 DFCYVNAGLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSV 1167
DFCYV GL LGQL GNRFTITLRG+ A++E IIK +AD LG++GF+NYFGLQRFGSGS+
Sbjct: 264 DFCYVKEGLCLGQLLGNRFTITLRGIVADSEDIIKASADALGRHGFINYFGLQRFGSGSL 323
Query: 1168 GTHAIGAALLRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAEK 1347
TH IGAALL+GEWK A+D+ILDPR+GE+ + +AR+YY+ S+D+ GTL+++PR+L+AE+
Sbjct: 324 PTHLIGAALLQGEWKLAVDMILDPRDGEKSAIAKARKYYKESSDVVGTLKQLPRYLVAER 383
Query: 1348 AILTGLKKDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLVY 1527
A+L LK P N++QAL IPR LR++YVHSYQSYLWNHA++ R+QKYG +++ +GDLVY
Sbjct: 384 AVLQTLKTSPGNYLQALKSIPRTLRMLYVHSYQSYLWNHAASKRVQKYGTENVVLGDLVY 443
Query: 1528 CKRPEVTSTQGEVQNIETSE--ENAENDLETLYESTDSEVFQDNNTEVKVVNSDDIESGK 1701
CK ++ G+V SE E+ ++ E S + VKVV+ +D+ SG
Sbjct: 444 CKE----NSTGKVTESVGSEYAEDCSGRYDSNNEDEISGEIHEEIDSVKVVDVEDLNSGY 499
Query: 1702 YAIEDVVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYRRLV 1881
Y I+DV+LP+PGS+I YP N IA V+ D+AKKD +SL ES H+V++FSI +I+G YRR+
Sbjct: 500 YTIDDVILPMPGSRIKYPTNHIANVYEDLAKKDGISLTESVHNVEDFSITSITGCYRRVF 559
Query: 1882 QKPIDFTWKIMKYEDPGQTLAETDHDLLQKSLKKDNAPLETPSGITMLHDKDADAC---- 2049
QKPI+F W+++ Y D + L ETD D + KS P+ T + + K+ +A
Sbjct: 560 QKPINFEWELLTYSDSNKQLVETDLDKVNKS-----KPMGTVKQMGAANGKNEEAFDCIR 614
Query: 2050 SLAATDKKCSDKDNSEPSTDTV-------------CSSYIALQLAFTLPTSCYATMAIRE 2190
L +++ ++ SE + + + S IAL+L+FTLP SCYATMAIRE
Sbjct: 615 ELESSNDVVKVENYSEIAGEEIKLPHDESLSGSSSQDSQIALKLSFTLPASCYATMAIRE 674
Query: 2191 LLKTSTSTQYHKSLD 2235
LLKTSTS YHK+L+
Sbjct: 675 LLKTSTSVAYHKTLN 689
>ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana]
gi|52354299|gb|AAU44470.1| hypothetical protein AT3G04820
[Arabidopsis thaliana] gi|61742699|gb|AAX55170.1|
hypothetical protein At3g04820 [Arabidopsis thaliana]
gi|332640619|gb|AEE74140.1| pseudouridine synthase
[Arabidopsis thaliana]
Length = 715
Score = 699 bits (1804), Expect = 0.0
Identities = 371/729 (50%), Positives = 495/729 (67%), Gaps = 23/729 (3%)
Frame = +1
Query: 118 EEADVGILCYTTDVPGFRGILKHRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVV 297
+EADVGI C+ + +PGFRGILK RY DFIVNEVD +GNVV LT LD P + V
Sbjct: 41 DEADVGISCFISQLPGFRGILKQRYADFIVNEVDMDGNVVHLTSLDLPPE-------MAV 93
Query: 298 KEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISAKDFDDIEPIVLT 477
KE D KS + + Y+ +++F+ + S DAE+L++L+ ++++ ++ P+VL
Sbjct: 94 KEEDKAKSCDNVP----QNYTSAVESFKSISSVTDAERLEILINQVTSGTDGEVLPVVLD 149
Query: 478 PDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRY-FGKNTEXXXXXXXXXXXX 654
P SDK+ R +HNF K N FLVTDT+DGP++ +KC+R+R G N
Sbjct: 150 PSSDKSKRTAIHNFVKENFKFLVTDTVDGPDSTSKCIRVRVNSGANNNRGNRSKK----- 204
Query: 655 XXXXXXXXXXXXXXXXXXYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKENKDTQEAL 828
+ GD+ FDSRG++ W E GKFLRFHLYKENKDTQEAL
Sbjct: 205 --------------------RKERGDKPFDSRGSEHWPEHVGKFLRFHLYKENKDTQEAL 244
Query: 829 NVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLGDFCYVNA 1008
+IGKMLG++PK+FG +GTKDKR+V+TQRVTVFKQ+AS+LA+LN RL+GIK+GDFC V
Sbjct: 245 GLIGKMLGVQPKSFGFSGTKDKRSVSTQRVTVFKQQASKLAALNKRLFGIKVGDFCNVKE 304
Query: 1009 GLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSVGTHAIGA 1188
GL+LGQL GNRFTITLRGV A++E IK++A+ LGK+GF+NYFGLQRFGSGSV TH +GA
Sbjct: 305 GLLLGQLMGNRFTITLRGVVADSEETIKQSAESLGKDGFINYFGLQRFGSGSVPTHHVGA 364
Query: 1189 ALLRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAEKAILTGLK 1368
ALL+GEWK A+D+ILDPRE ER V +AREYY+ + DIDGTLR++PR+L+AE+AIL LK
Sbjct: 365 ALLKGEWKDAVDMILDPRETERHVVNDAREYYKETGDIDGTLRQLPRYLVAERAILQCLK 424
Query: 1369 KDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLVYCKRPEVT 1548
K P N++QAL IPR LR+MYVHSYQSYLWN+A++ R++ YG + +GDLV K V
Sbjct: 425 KCPGNYLQALKGIPRTLRMMYVHSYQSYLWNNAASLRVKNYGTSQVVLGDLVSTK---VD 481
Query: 1549 STQGEVQNIETSEENAENDLETLYESTDSEVFQDNNTE----VKVVNSDDIESGKYAIED 1716
+ + V ++ TSE N ++ + D D E VKVV+ +D+E+G Y+ D
Sbjct: 482 AAKRMVDSL-TSEHNESSEEALDCDQVDDTAVVDLPAERSDLVKVVSIEDLEAGTYSTSD 540
Query: 1717 VVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYRRLVQKPID 1896
+VLPLPGS+++YP NDIA+++HD+AKKD +SL ES H VKEFSI +++GGYRR+ QKPID
Sbjct: 541 IVLPLPGSRVIYPSNDIAEIYHDLAKKDGISLTESIHGVKEFSITSMTGGYRRVFQKPID 600
Query: 1897 FTWKIMKYEDPGQTLAETDHDLL----------------QKSLKKDNAPLETPSGITMLH 2028
F W+++ Y D + LAETD D + +S+K D P + SG T L
Sbjct: 601 FEWELLTYTDSNKPLAETDLDRIPMNKPVEKVGSTEEIEDESMKSDTNPHD--SGETNLK 658
Query: 2029 DKDADACSLAATDKKCSDKDNSEPSTDTVCSSYIALQLAFTLPTSCYATMAIRELLKTST 2208
D+ TD ++KD P ++ + +AL++A TLP+SCYATMAIRELLKTST
Sbjct: 659 DQ---------TDSNEAEKDTGNPDSE---QTQMALKMALTLPSSCYATMAIRELLKTST 706
Query: 2209 STQYHKSLD 2235
S YHK+L+
Sbjct: 707 SVAYHKTLN 715
>emb|CBI34194.3| unnamed protein product [Vitis vinifera]
Length = 693
Score = 696 bits (1796), Expect = 0.0
Identities = 376/726 (51%), Positives = 491/726 (67%), Gaps = 20/726 (2%)
Frame = +1
Query: 118 EEADVGILCYTTDVPGFRGILKHRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVV 297
EE+DVGI Y + +PGFRGILK RY DFIVNEVD +GNVV LT LDAP + +
Sbjct: 5 EESDVGISFYISQLPGFRGILKQRYCDFIVNEVDSDGNVVHLTSLDAPPESM-------- 56
Query: 298 KEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISAKDFDDIEPIVLT 477
E + K ++QS N+ Y+ +I+ F LV ++D E LK L+ ++++ D + PIVL+
Sbjct: 57 -EKNETKISDQS----NKGYASEIELFRSLVGDSDVECLKGLIDQVASGIEDGVSPIVLS 111
Query: 478 PDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYFGKNTEXXXXXXXXXXXXX 657
SDK+HR VHNFFK NL FLVTDTIDGP+T +KC+R+R +
Sbjct: 112 SSSDKSHRTAVHNFFKENLKFLVTDTIDGPDTSSKCIRVRLNSGGSHNNGRNSRKRKDRR 171
Query: 658 XXXXXXXXXXXXXXXXXYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKENKDTQEALN 831
D+ FDSRG+D+W E GKFLRFHLYKENKDTQEA+
Sbjct: 172 ------------------------DKPFDSRGSDNWSEHVGKFLRFHLYKENKDTQEAIG 207
Query: 832 VIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLGDFCYVNAG 1011
+IGKMLG++P++FG AGTKDKR+V+TQRVTVFKQ A+RLA+LN RL GIK+GDFC+V G
Sbjct: 208 LIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHANRLAALNERLIGIKVGDFCHVREG 267
Query: 1012 LVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSVGTHAIGAA 1191
LVLGQL GNRFTITLRGV A++E IK +AD LG+ GF+NYFGLQRFGSGSV TH IGAA
Sbjct: 268 LVLGQLLGNRFTITLRGVVADSEETIKASADALGRLGFINYFGLQRFGSGSVPTHLIGAA 327
Query: 1192 LLRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAEKAILTGLKK 1371
LLRGEW+TA+ LILDPREG+ + +AREYY+ S+DI+GTLR+ PRHL+AE+AIL LKK
Sbjct: 328 LLRGEWETAVSLILDPREGDIL-LLKAREYYKESDDIEGTLRQFPRHLVAERAILQCLKK 386
Query: 1372 DPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLVYCKRPEVTS 1551
P N++QAL IPR LR+MYVHSYQSYLWNHA++ R+Q YG K + +GDLVYCK
Sbjct: 387 YPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGTKQVVLGDLVYCKGDNAEK 446
Query: 1552 TQGEVQNIETSEENAENDLETLY--ESTDSEVFQDNNTEVKVVNSDDIESGKYAIEDVVL 1725
V N E ++ + ++ + E +++++ ++ N VK ++++D+ +G Y I+DVVL
Sbjct: 447 VT-RVVNSEFDDDGCSDAFDSSHFDEISETDLPEERNDPVKALDAEDLLTGNYTIDDVVL 505
Query: 1726 PLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYRRLVQKPIDFTW 1905
PLPGS+ +YP NDIAQV+HD AKKD++SL ES+H VKEFSI N++GG+RR+ QKPIDF W
Sbjct: 506 PLPGSRAIYPTNDIAQVYHDFAKKDAISLTESAHSVKEFSITNMTGGFRRVFQKPIDFEW 565
Query: 1906 KIMKYEDPGQTLAETDHDLLQKSLKKDN--APLETPSGITMLHDKDADACSLAATDKKCS 2079
+++ Y + LAETD D + KS K N ++ +G + S +
Sbjct: 566 ELLTYTEGNIPLAETDWDKITKS-KPSNIIGGEDSRNGNEKENSFQCMKQSESFEHNVNL 624
Query: 2080 DKDNSEPSTDT--------------VCSSYIALQLAFTLPTSCYATMAIRELLKTSTSTQ 2217
DN+EP+ T + AL+L+FTLP SCYATMAIRELLKTSTS
Sbjct: 625 STDNNEPNGVTEIGLPQVEPQFESGAPEAQRALKLSFTLPASCYATMAIRELLKTSTSVA 684
Query: 2218 YHKSLD 2235
+ K+L+
Sbjct: 685 FQKTLN 690
>ref|XP_004961565.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X2
[Setaria italica]
Length = 685
Score = 692 bits (1786), Expect = 0.0
Identities = 358/707 (50%), Positives = 476/707 (67%), Gaps = 3/707 (0%)
Frame = +1
Query: 121 EADVGILCYTTDVPGFRGILKHRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVVK 300
E + GI C+ + +PGFRG+LKHRY+DFIV+EV +G VV+LT D P S+ VK
Sbjct: 9 EVEAGISCFASSLPGFRGVLKHRYSDFIVHEVARDGTVVQLTSFDLP------SECVDVK 62
Query: 301 EADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISAKDFDDIEPIVLTP 480
E + + +D +S+ +++F L +AD + L+ LL R++A D+ P++L+P
Sbjct: 63 EEEKAAPSADAD------HSQALESFRALCGDADCDALRGLLERVAAGGDGDVSPVILSP 116
Query: 481 DSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYFGKNTEXXXXXXXXXXXXXX 660
D+DKAHR EVHNFFK N FLVTDT++ + +C+R+R G
Sbjct: 117 DADKAHRSEVHNFFKKNFKFLVTDTVEHSDGIQRCIRVR-LGSGAGGGRGCGGGGRGKGR 175
Query: 661 XXXXXXXXXXXXXXXXYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKENKDTQEALNV 834
+D D+ FDSRG+ +W + GKFLRFHLYKENKDTQEAL +
Sbjct: 176 KRKNMGG-----------SDWRDDRPFDSRGSSNWSDSVGKFLRFHLYKENKDTQEALGI 224
Query: 835 IGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLGDFCYVNAGL 1014
IGKMLGL+P++FG AGTKDKRAVT Q+VTVFK +A+RLA+LN RL+GIK+G+FCYV GL
Sbjct: 225 IGKMLGLQPRSFGFAGTKDKRAVTLQQVTVFKVQANRLAALNNRLFGIKVGNFCYVKEGL 284
Query: 1015 VLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSVGTHAIGAAL 1194
VLGQL GN+FTITLRGV AE+E +IK AADGLGKNGF+NY+GLQRFGSGS+ TH +GAAL
Sbjct: 285 VLGQLMGNQFTITLRGVIAESEDVIKAAADGLGKNGFINYYGLQRFGSGSIPTHLVGAAL 344
Query: 1195 LRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAEKAILTGLKKD 1374
LRGEWK A++LILDPREGER+D+ E R++Y+ DID LR PRHL+AE+AIL LKK
Sbjct: 345 LRGEWKAAVNLILDPREGERDDINEVRKHYKEHGDIDKALRNFPRHLVAERAILQCLKKC 404
Query: 1375 PSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLVYCKR-PEVTS 1551
P N++QAL IPR LR+MYVHSYQSYLWNHA++ R++KYG + GDLVY K P S
Sbjct: 405 PGNYLQALKGIPRTLRMMYVHSYQSYLWNHAASMRVEKYGMSQVVEGDLVYNKESPPEES 464
Query: 1552 TQGEVQNIETSEENAENDLETLYESTDSEVFQDNNTEVKVVNSDDIESGKYAIEDVVLPL 1731
T ++ + N+ ++++ E+ E Q VK+V+S D+ G Y +DVVLPL
Sbjct: 465 TSVDIAETDDGHTNS-SEIDLCSEAQPEETIQ----SVKIVDSGDLLKGMYTFDDVVLPL 519
Query: 1732 PGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYRRLVQKPIDFTWKI 1911
PGS+ ++P N++A+++H+MAKKD +SL+E++H VKEFSI ++ GGYRR+ Q+PIDF W++
Sbjct: 520 PGSQAMFPGNEVAEIYHEMAKKDGISLMENAHGVKEFSITSMKGGYRRVFQRPIDFQWEL 579
Query: 1912 MKYEDPGQTLAETDHDLLQKSLKKDNAPLETPSGITMLHDKDADACSLAATDKKCSDKDN 2091
M Y D +LAETD D+L + K+ L T +KD+D + +K
Sbjct: 580 MTYTDDSSSLAETDLDVLSRIKPKEANELVTTDQSQDKLEKDSDTSTPTNGSDSLENKPT 639
Query: 2092 SEPSTDTVCSSYIALQLAFTLPTSCYATMAIRELLKTSTSTQYHKSL 2232
P T +A++L FTLP SCYATMAIRELLKTSTS Y K+L
Sbjct: 640 GSPDT---APRKMAIKLVFTLPASCYATMAIRELLKTSTSVAYQKTL 683
>gb|EOY11113.1| Pseudouridine synthase family protein, putative isoform 1 [Theobroma
cacao]
Length = 763
Score = 690 bits (1781), Expect = 0.0
Identities = 370/743 (49%), Positives = 487/743 (65%), Gaps = 38/743 (5%)
Frame = +1
Query: 121 EADVGILCYTTDVPGFRGILKHRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVVK 300
E+DVGILC+ + +PGFRGILK RY+DFIVNEVD EGNVV LT LDAP EV ++ K
Sbjct: 48 ESDVGILCFISHLPGFRGILKQRYSDFIVNEVDTEGNVVHLTSLDAPP-EVMIDVFSLNK 106
Query: 301 --EADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISAKDFDDIEPIVL 474
+A E T+ D L N+ Y+ +I F L + DA++L+ + +I++ +DI PIVL
Sbjct: 107 FTQAVQEGETKTPDQL-NKCYASEIIKFRSLAGDTDADRLEAFINQITSGSEEDICPIVL 165
Query: 475 TPDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYFGKNTEXXXXXXXXXXXX 654
+PDSDK+HR +HNFFK NL FLVTDT+DGP++ +KC+R+R N
Sbjct: 166 SPDSDKSHRTAMHNFFKENLRFLVTDTVDGPDSSSKCIRVRLNSGNNNKGRNSKK----- 220
Query: 655 XXXXXXXXXXXXXXXXXXYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKENKDTQEAL 828
+ GD+ +DSRG+ W E GKFLRFHLYKENKDTQEAL
Sbjct: 221 --------------------RKERGDKPYDSRGSSHWPEHLGKFLRFHLYKENKDTQEAL 260
Query: 829 NVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLGDFCYVNA 1008
+IGKMLG++P++FG AGTKDKR+V+TQRVTVFKQ ASRLA+LN RL GIK+GDFCYV
Sbjct: 261 GLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLAALNERLIGIKVGDFCYVKD 320
Query: 1009 GLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSVGTHAIGA 1188
+LGQL GNRFTI LRG+ A++E IK + + LG++GF+NYFGLQRFGSGS+ TH IGA
Sbjct: 321 DFLLGQLLGNRFTIILRGIVADSEETIKASVESLGRHGFINYFGLQRFGSGSIPTHRIGA 380
Query: 1189 ALLRGEWKTAIDLILDPREGEREDV------------------REAREYYRSSNDIDGTL 1314
LLRGEW+ A ILDPREG+ + + AREYY+ + DI+GTL
Sbjct: 381 TLLRGEWQAAASTILDPREGDILSLTFFFPFLLGKALFRCLTTQRAREYYKETGDIEGTL 440
Query: 1315 RRMPRHLIAEKAILTGLKKDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYG 1494
R++PRHL+AE+A+L LKK P N++QAL IPR LR+MYVHSYQSYLWNHA++ R++KYG
Sbjct: 441 RQLPRHLVAERAMLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVEKYG 500
Query: 1495 AKSIAVGDLVYCKRPEVTSTQGEVQNIETSEENAENDLETLYESTDSEVFQDNNTEVKVV 1674
+ + +GDLVYCK + + E + D L E + +++ + N VK +
Sbjct: 501 SNEVVLGDLVYCKGNDAEKVKVVPSEHEDNNFEDAYDCSQLDEISGTDLPEGKNNLVKAI 560
Query: 1675 NSDDIESGKYAIEDVVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMN 1854
+ DI +G Y IEDVVLP+PGS+I+YP NDIA V+HDMAKKD +SL ES H++KEFSI +
Sbjct: 561 TAADISTGNYTIEDVVLPMPGSRIIYPVNDIANVYHDMAKKDGISLTESVHNIKEFSITS 620
Query: 1855 ISGGYRRLVQKPIDFTWKIMKYEDPGQTLAETDHDLLQKSLKKDNAPLETPSGITMLHDK 2034
++G YRR+ QKPIDF W+++ Y D L+ETD D + K+ + E P+ T D
Sbjct: 621 MTGSYRRVFQKPIDFEWELLSYTDGSIALSETDLDKIAKTKPVNLVKEEKPTDGTEGQDS 680
Query: 2035 D--ADACSLAATDKKCSDKD--------------NSEPSTDTVCSSYIALQLAFTLPTSC 2166
+ DKK S + +S P ++++ + AL+LAFTLP SC
Sbjct: 681 SDHMEHIESFEDDKKFSTGNVEVEGSREAEPPQIHSLPESNSL-GTQKALKLAFTLPASC 739
Query: 2167 YATMAIRELLKTSTSTQYHKSLD 2235
YATMAIRELLKTSTS +HK+L+
Sbjct: 740 YATMAIRELLKTSTSVAFHKTLN 762
>ref|XP_003568149.1| PREDICTED: pseudouridylate synthase 7 homolog [Brachypodium
distachyon]
Length = 693
Score = 689 bits (1777), Expect = 0.0
Identities = 367/719 (51%), Positives = 479/719 (66%), Gaps = 14/719 (1%)
Frame = +1
Query: 121 EADVGILCYTTDVPGFRGILKHRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVVK 300
E +VGI C+T+ +PGFRG+LKHRY+DFIV+EV +G+VVRLT D PD+ V VK
Sbjct: 9 EPEVGITCFTSSLPGFRGVLKHRYSDFIVHEVARDGSVVRLTSFDLPDECVD------VK 62
Query: 301 EADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISAKDFDDIEPIVLTP 480
E + +D +S+ +++F L ++AD + LK LL R+SA P++L+P
Sbjct: 63 EEEKAAPPADAD------HSQALESFHALSTDADCDALKGLLERVSAGGDSGFSPVILSP 116
Query: 481 DSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYFGKNTEXXXXXXXXXXXXXX 660
D+DKAHR EVHNFFK N FLVTDT++ + KC+R+R +
Sbjct: 117 DADKAHRSEVHNFFKKNFKFLVTDTVEHSDGVKKCIRVRVGSE-----------AGGGRG 165
Query: 661 XXXXXXXXXXXXXXXXYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKENKDTQEALNV 834
+D D FD RG+ +W GKFLRFHL KENKDTQ+AL V
Sbjct: 166 SRGRGGGGRGKKRKNMNGSDWRDDTPFDRRGSTNWPPHIGKFLRFHLCKENKDTQDALGV 225
Query: 835 IGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLGDFCYVNAGL 1014
IGKMLGL+P+AFG +GTKDKRAVTTQ+VTVFK A++LA+LN RL+GIK+G+FCYV GL
Sbjct: 226 IGKMLGLQPRAFGFSGTKDKRAVTTQQVTVFKVPANKLAALNKRLFGIKVGNFCYVKEGL 285
Query: 1015 VLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSVGTHAIGAAL 1194
LGQL GNRFTITLRGV AE+E +IK A D LGKNGF+NY+GLQRFGS SV TH +G+AL
Sbjct: 286 GLGQLMGNRFTITLRGVVAESEGVIKAAVDSLGKNGFINYYGLQRFGSSSVPTHLVGSAL 345
Query: 1195 LRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAEKAILTGLKKD 1374
LRGEWKTA+ LILDPREGER+D+++ RE+Y+ DID LR PRHL+AEKAIL L+K
Sbjct: 346 LRGEWKTAVKLILDPREGERDDIKKVREHYKEHGDIDMALRNFPRHLVAEKAILQCLRKC 405
Query: 1375 PSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLVYCKRPEVTST 1554
P N++QAL IPR LR+MYVHSYQSYLWNHA++ R+QKYG + GDL+Y K S
Sbjct: 406 PENYLQALKGIPRTLRMMYVHSYQSYLWNHAASMRVQKYGISQVIEGDLIYSKE----SH 461
Query: 1555 QGEVQNIETSEENAENDLETLYESTDSEVFQDNNTEVKVVNSDDIESGKYAIEDVVLPLP 1734
GE ++ TSE + ++ + + + ++N VK+V+S+D+ G Y+ EDVVLPLP
Sbjct: 462 PGEATSVGTSETDDDHANSSEIDICSETLPEENIQSVKIVDSEDLLKGIYSFEDVVLPLP 521
Query: 1735 GSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYRRLVQKPIDFTWKIM 1914
GS+ L+P N++A+++H+MAKKD +SL S+H VKEFSI N+ G YRR+ Q+PIDF W++M
Sbjct: 522 GSQALFPGNEVAEIYHEMAKKDGISLTGSAHGVKEFSITNMKGSYRRVFQRPIDFEWELM 581
Query: 1915 KYEDPGQTLAETDHDLLQKSLKKDNAPLETPSGITMLHDKDADACSLAATDKKCSDKDNS 2094
KY D +LAETD D+L K +K A P + + K AD C L S +NS
Sbjct: 582 KYTDESASLAETDMDILSK-VKLTEAKANEPGSSGVSNSKPAD-CKLE------SPSENS 633
Query: 2095 EPSTDT------------VCSSYIALQLAFTLPTSCYATMAIRELLKTSTSTQYHKSLD 2235
P+++T + S +A++LAFTLP S YATMAIRELLK TS Y K+LD
Sbjct: 634 MPTSETSLGENKSNGSSDISPSKLAVKLAFTLPASTYATMAIRELLKNPTSVAYQKTLD 692
>ref|XP_006432989.1| hypothetical protein CICLE_v10003382mg [Citrus clementina]
gi|557535111|gb|ESR46229.1| hypothetical protein
CICLE_v10003382mg [Citrus clementina]
Length = 697
Score = 688 bits (1776), Expect = 0.0
Identities = 365/725 (50%), Positives = 492/725 (67%), Gaps = 27/725 (3%)
Frame = +1
Query: 118 EEADVGILCYTTDVPGFRGILKHRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAVV 297
+E+D GILC+ +++PGFRGILK RY DFIVNEVD + VV LT LD P +E
Sbjct: 5 DESDAGILCFISNLPGFRGILKQRYCDFIVNEVDTDRKVVHLTSLDVPPEEA-------- 56
Query: 298 KEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRI-SAKDFDDIEPIVL 474
A T+ SD L N Y+ +I++F L ++DA+ L+ L+ ++ S K+ D I PIVL
Sbjct: 57 --AVEHNETKASDQL-NRSYASEIESFRSLAGDSDAQCLETLINQVTSGKNEDSIPPIVL 113
Query: 475 TPDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRY--------FGKNTEXXXX 630
+ +SDK+HR +HNFFK N FLVTDT+DGP+ +KC+R+R G+N++
Sbjct: 114 SANSDKSHRTAIHNFFKDNFKFLVTDTVDGPDASSKCIRVRLNSGGNNNSMGRNSKK--- 170
Query: 631 XXXXXXXXXXXXXXXXXXXXXXXXXXYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKE 804
+ GD FDSRG+++W E GKFLRFHLYKE
Sbjct: 171 ----------------------------RKERGDNPFDSRGSENWPEQLGKFLRFHLYKE 202
Query: 805 NKDTQEALNVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKL 984
NKDTQEAL +I KMLG+ P++FG AGTKDKR+V+TQRVTVFKQRAS+LA+LN RL GI+L
Sbjct: 203 NKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQRASKLAALNKRLIGIRL 262
Query: 985 GDFCYVNAGLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGS 1164
GDFCYV GL+LGQL GNRFTITLRGV ++E +IK +A+ LG+NGF+NYFGLQRFGSGS
Sbjct: 263 GDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLGRNGFINYFGLQRFGSGS 322
Query: 1165 VGTHAIGAALLRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAE 1344
V TH +GA LLRGEWK+A+ +ILDPREG+ + +AREYY+ ++DIDGTLR++PRHL+AE
Sbjct: 323 VPTHLVGATLLRGEWKSAVKMILDPREGDIL-LFKAREYYKETDDIDGTLRKLPRHLVAE 381
Query: 1345 KAILTGLKKDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLV 1524
+AIL LKK P N++QAL IPR LR+MYVHSYQS+LWNHA++AR+QK+G + + VGDLV
Sbjct: 382 RAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLV 441
Query: 1525 YCKRPEVTSTQGEVQ-NIETSEENAENDLETLYESTDSEVFQDNNTEVKVVNSDDIESGK 1701
+CK + G V E N +D L E +++ + VK V ++DI SGK
Sbjct: 442 FCKGDDTEKELGCVNPEFEYESSNDADDSSHLDEVPETDHPDGRHNLVKTVTAEDINSGK 501
Query: 1702 YAIEDVVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYRRLV 1881
Y I+DVVLPLPGS+++YP ND+A+V+H +A+KD ++L ES H+VKEFSI +++G YRR+
Sbjct: 502 YTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLTESLHNVKEFSITSMTGNYRRVF 561
Query: 1882 QKPIDFTWKIMKYEDPGQTLAETDHDLLQKS-----LKKDNA----PLETPSGITMLHDK 2034
QKP+DF W+++ Y D + LAETD D + K +K++ A + PS +
Sbjct: 562 QKPMDFEWELLTYIDGNKPLAETDLDKIAKDKLANIVKEEEAVCGNKKKDPSDCMKQSES 621
Query: 2035 DADACSLAATDKKCS-DKDNSEPSTDTVCSS-----YIALQLAFTLPTSCYATMAIRELL 2196
+ L+ + + + K+ +P ++VC + +AL+L TLP+SCYATMAIRELL
Sbjct: 622 LSKDIKLSTENNEAACAKEVKQPHVESVCGADSQGKQMALKLGLTLPSSCYATMAIRELL 681
Query: 2197 KTSTS 2211
KTSTS
Sbjct: 682 KTSTS 686
>ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
[Glycine max]
Length = 687
Score = 688 bits (1775), Expect = 0.0
Identities = 367/735 (49%), Positives = 495/735 (67%), Gaps = 28/735 (3%)
Frame = +1
Query: 115 AEEADVGILCYTTDVPGFRGILKHRYTDFIVNEVDCEGNVVRLTCLDAPDKEVKASQMAV 294
AEE +VGI C+ +D+ GFRGILK RY+DFIVNEVD +G VV+L+ LDAP +E +
Sbjct: 6 AEEHEVGISCFISDLRGFRGILKQRYSDFIVNEVDRDGAVVQLSSLDAPLEEPE------ 59
Query: 295 VKEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISAKDFDDIEPIVL 474
E T D + + Y+ QI++F+ L E DA L+ + +I+A D + PIVL
Sbjct: 60 ------ENRTNTHDTVVS--YASQIESFKSLAEEYDAILLEEFINKINAGGEDSVSPIVL 111
Query: 475 TPDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYF-------GKNTEXXXXX 633
+PDSDK+HR +HNFFK N FLVTD ++GP+ +KC+R+R GKN++
Sbjct: 112 SPDSDKSHRKAMHNFFKENFKFLVTDVVNGPDASSKCIRVRLNSAEPNNKGKNSKK---- 167
Query: 634 XXXXXXXXXXXXXXXXXXXXXXXXXYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKEN 807
+ D+ FDSRG+++W E GKFLRFHLYKEN
Sbjct: 168 ---------------------------RKERDDKPFDSRGSENWPENVGKFLRFHLYKEN 200
Query: 808 KDTQEALNVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKLG 987
KDT EAL VIG ML ++PK+FG AGTKDKRAVTTQRVTV+KQ+ASRLASLN RL+GIKLG
Sbjct: 201 KDTHEALGVIGNMLSIQPKSFGFAGTKDKRAVTTQRVTVYKQQASRLASLNKRLFGIKLG 260
Query: 988 DFCYVNAGLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGSV 1167
DFCYV GL LGQL GNRFTITLRG+ A++E IIK +AD LG++GF+NYFGLQRFGSGS+
Sbjct: 261 DFCYVKEGLCLGQLLGNRFTITLRGIVADSEDIIKASADALGRHGFINYFGLQRFGSGSL 320
Query: 1168 GTHAIGAALLRGEWKTAIDLILDPREGEREDVREAREYYRSSNDIDGTLRRMPRHLIAEK 1347
TH IGAALLRGEWK A+D+ILDPR+GE+ + +AR+YY+ S+D+ GTL+++PR+L+AE+
Sbjct: 321 PTHLIGAALLRGEWKLAVDMILDPRDGEKSAIAKARKYYKESSDVVGTLKQLPRYLVAER 380
Query: 1348 AILTGLKKDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKSIAVGDLVY 1527
A+L LK P N++QAL IPR LR++YVHSYQSYLWNHA++ R+QKYG +++ +GDLVY
Sbjct: 381 AVLQTLKTSPGNYLQALKSIPRTLRMLYVHSYQSYLWNHAASKRVQKYGTENVVLGDLVY 440
Query: 1528 CKRPEVTSTQGEVQNIETSE--ENAENDLETLYESTDSEVFQDNNTEVKVVNSDDIESGK 1701
CK ++ G+V SE E+ ++ E S + VKV++++D+ SG
Sbjct: 441 CKE----NSTGKVTEFVGSEYAEDCRGRYDSNNEDEVSGEIHEEINSVKVIDAEDLNSGC 496
Query: 1702 YAIEDVVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVKEFSIMNISGGYRRLV 1881
Y I+DV+LP+PGS++ YP N IA V+ D+AKKD +SL ES H+V++FSI +I+G YRR+
Sbjct: 497 YTIDDVILPMPGSRVKYPTNHIANVYEDLAKKDGISLTESVHNVEDFSITSITGCYRRVF 556
Query: 1882 QKPIDFTWKIMKYEDPGQTLAETDHDLLQKSLKKDNAPLETPSGITMLHDKDADAC---- 2049
QKPI+F W+++ Y D + L +TD D + KS P+ T + + K+ +A
Sbjct: 557 QKPINFEWELLSYSDSSEQLVDTDLDKINKS-----KPMNTVKQMGAANGKNEEAFDCIR 611
Query: 2050 SLAATDKKCSDKDNSE--------PSTDTVC-----SSYIALQLAFTLPTSCYATMAIRE 2190
L ++D ++ SE P +++ S IAL+L+FTLP SCYATMAIRE
Sbjct: 612 ELESSDDIAKVENYSEILGEEVKLPHDESLIGSSSQDSQIALKLSFTLPASCYATMAIRE 671
Query: 2191 LLKTSTSTQYHKSLD 2235
LLKTSTS YHK+L+
Sbjct: 672 LLKTSTSVAYHKTLN 686
>ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ricinus communis]
gi|223548191|gb|EEF49682.1| tRNA pseudouridine synthase
d, putative [Ricinus communis]
Length = 753
Score = 687 bits (1773), Expect = 0.0
Identities = 372/746 (49%), Positives = 494/746 (66%), Gaps = 32/746 (4%)
Frame = +1
Query: 94 FSLIDQMAEEADVGILCYTTDVPGFRGILKHRYTDFIVNEVDCEGNVVRLTCLDAPDKEV 273
F + EE+DVGI CY + VPGFRGILK RY+DFIVNEVD GNVV LT L P + V
Sbjct: 45 FKTLMTTIEESDVGISCYISKVPGFRGILKQRYSDFIVNEVDNNGNVVHLTSLHVPREIV 104
Query: 274 KASQMAVVKEADNEKSTEQSDGLGNELYSEQIQAFERLVSEADAEKLKVLLGRISAKD-F 450
+ ++ E+ E ++ +G Y+ +I++F L +AD ++L+ + ++ ++D
Sbjct: 105 EVAE---------EREEEITNQVGKN-YAAEIESFRELAGDADTQRLEAFINQVISEDNC 154
Query: 451 DDIEPIVLTPDSDKAHRGEVHNFFKANLGFLVTDTIDGPETQTKCVRIRYFGKNTEXXXX 630
+I PI+L+PDSDKAHR HNFFK L FLVTDT+DGP+ +KC+R+R +
Sbjct: 155 INISPILLSPDSDKAHRTATHNFFKEKLKFLVTDTVDGPDASSKCIRVRLNSRGN----- 209
Query: 631 XXXXXXXXXXXXXXXXXXXXXXXXXXYHNDQLGDQAFDSRGADDWQE--GKFLRFHLYKE 804
D+ FDSRG+D W E GKFLRFHLYKE
Sbjct: 210 ------------------INEGNRNSKKRKDRNDKPFDSRGSDHWPEHLGKFLRFHLYKE 251
Query: 805 NKDTQEALNVIGKMLGLRPKAFGIAGTKDKRAVTTQRVTVFKQRASRLASLNPRLYGIKL 984
NKDTQEA+ +IGKMLG++P++FG AGTKDKR+V+TQRVTVFKQ ASRLA+LN RL GIK+
Sbjct: 252 NKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLAALNDRLIGIKV 311
Query: 985 GDFCYVNAGLVLGQLSGNRFTITLRGVAAENEHIIKEAADGLGKNGFVNYFGLQRFGSGS 1164
GDFCYVN GL+LGQL GNRFT+TLRGV A++E IK +AD LG++GF+NYFGLQRFGSGS
Sbjct: 312 GDFCYVNEGLLLGQLLGNRFTVTLRGVVADSEDTIKGSADSLGRHGFINYFGLQRFGSGS 371
Query: 1165 VGTHAIGAALLRGEWKTAIDLILDPREGE-------REDVREAREYYRSSNDIDGTLRRM 1323
V TH IGAALLRGEWK A+ +ILDPREG+ +R AREYY+ S+DIDGTLR++
Sbjct: 372 VPTHLIGAALLRGEWKYAVSMILDPREGDILLLVICFMWMRMAREYYKESDDIDGTLRQL 431
Query: 1324 PRHLIAEKAILTGLKKDPSNHIQALSCIPRNLRLMYVHSYQSYLWNHASTARLQKYGAKS 1503
PR+L AE+A+L LKK P N++QAL IPR LR+MYVHSYQSYLWNHA++ R+QKYG
Sbjct: 432 PRYLTAERAVLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGTDQ 491
Query: 1504 IAVGDLVYCKRPEVTSTQGEVQNIETSEENAENDLETLY------ESTDSEVFQDNNTEV 1665
+ VGDLVYCK + T+ E+ + ++ E ++D E +Y E++ +++ + +T V
Sbjct: 492 VVVGDLVYCKGDD---TEREIGSANSACE--DDDCEDMYGCSNLDETSGTDLSERKDTLV 546
Query: 1666 KV---VNSDDIESGKYAIEDVVLPLPGSKILYPENDIAQVFHDMAKKDSLSLIESSHHVK 1836
KV VN++D+ +G Y I DV+LP+PGS++ YP NDIA+V+HD+A+KD+++L ES H K
Sbjct: 547 KVEQAVNAEDLSTGNYTINDVILPMPGSRVSYPTNDIAKVYHDLAEKDAINLAESVHSAK 606
Query: 1837 EFSIMNISGGYRRLVQKPIDFTWKIMKYEDPGQTLAETDHDLLQKSLKKD-NAPLETPSG 2013
EFSI +++G YRR+ QKP+DF W+I+ Y D LAETD + L K+ + N ET
Sbjct: 607 EFSITSMTGSYRRVFQKPMDFEWEILSYTDGTTPLAETDMEKLAKAKSIELNKEEETKKN 666
Query: 2014 ITMLHDKDADACSLAATDKKCSDKDNSEPSTDTVCS------------SYIALQLAFTLP 2157
T + D S + N E + + + AL+L FTLP
Sbjct: 667 DTKSPSDCMRQPMSSGNDLHLSAEYNREGEREVEVAKVEPLYGPNTRGAQTALKLTFTLP 726
Query: 2158 TSCYATMAIRELLKTSTSTQYHKSLD 2235
SCYATMAIRELLKTSTS +HK+L+
Sbjct: 727 ASCYATMAIRELLKTSTSVAFHKTLN 752