BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00018033
         (523 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006840107.1| hypothetical protein AMTR_s00224p00011500 [A...   191   9e-47
gb|EXB36850.1| hypothetical protein L484_003235 [Morus notabilis]     181   7e-44
ref|XP_006423563.1| hypothetical protein CICLE_v10027915mg [Citr...   181   9e-44
ref|XP_006494589.1| PREDICTED: pentatricopeptide repeat-containi...   180   2e-43
ref|XP_006494588.1| PREDICTED: pentatricopeptide repeat-containi...   180   2e-43
ref|XP_006494587.1| PREDICTED: pentatricopeptide repeat-containi...   180   2e-43
ref|XP_006412181.1| hypothetical protein EUTSA_v10024275mg [Eutr...   177   1e-42
ref|XP_003607170.1| Pentatricopeptide repeat-containing protein ...   176   3e-42
ref|XP_004505826.1| PREDICTED: pentatricopeptide repeat-containi...   174   8e-42
ref|XP_004231448.1| PREDICTED: pentatricopeptide repeat-containi...   173   2e-41
ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containi...   172   4e-41
emb|CBI37948.3| unnamed protein product [Vitis vinifera]              172   4e-41
ref|XP_006359637.1| PREDICTED: pentatricopeptide repeat-containi...   172   5e-41
ref|XP_006359636.1| PREDICTED: pentatricopeptide repeat-containi...   172   5e-41
ref|XP_004292148.1| PREDICTED: pentatricopeptide repeat-containi...   172   5e-41
ref|NP_195209.2| pentatricopeptide repeat protein MRL1 [Arabidop...   171   1e-40
dbj|BAE98839.1| hypothetical protein [Arabidopsis thaliana]           171   1e-40
dbj|BAF02081.1| hypothetical protein [Arabidopsis thaliana]           171   1e-40
gb|EOX97788.1| Pentatricopeptide repeat-containing protein, puta...   170   2e-40
ref|XP_006286114.1| hypothetical protein CARUB_v10007663mg [Caps...   170   2e-40

>ref|XP_006840107.1| hypothetical protein AMTR_s00224p00011500 [Amborella trichopoda]
            gi|548841763|gb|ERN01782.1| hypothetical protein
            AMTR_s00224p00011500 [Amborella trichopoda]
          Length = 1185

 Score =  191 bits (485), Expect = 9e-47
 Identities = 86/172 (50%), Positives = 125/172 (72%)
 Frame = -3

Query: 521  AKREGIRPGNIIYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGK 342
            AK  GI+ GNI+YSS+MGACR+ K+W++A+ LYE++K   ++PTVST+NALITS C+  +
Sbjct: 776  AKNHGIQIGNILYSSVMGACRHAKSWQRALELYEDIKSIKLLPTVSTLNALITSLCEGDQ 835

Query: 341  LQESITILEEMKQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNC 162
            L +++ +LEE ++  + PN+ITY+IL + CE++DE E A+KL S +  DG+  +++MC C
Sbjct: 836  LHKAVEVLEETREAGMCPNSITYSILFVECEKKDETECALKLLSYSKKDGIGVNLIMCGC 895

Query: 161  VIGLCLRRYQHDSVLSAIIQRDETGNMQIHNQWTSQALLTYRQAISVGVKPT 6
              GLCLRRY+  S L   I    +GN QI NQWTS AL+ YR+ +S G+ PT
Sbjct: 896  FTGLCLRRYEKASALGEPILAFSSGNAQIDNQWTSWALMVYRETVSAGIIPT 947


>gb|EXB36850.1| hypothetical protein L484_003235 [Morus notabilis]
          Length = 1125

 Score =  181 bits (460), Expect = 7e-44
 Identities = 84/172 (48%), Positives = 122/172 (70%)
 Frame = -3

Query: 521  AKREGIRPGNIIYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGK 342
            AK  G++ G + YSSLMGAC N KNW+KA+ LYE+LK      TVST+NALIT+ CD  +
Sbjct: 740  AKNRGVKFGTVSYSSLMGACSNAKNWQKALELYEDLKSTKSEQTVSTVNALITALCDGDQ 799

Query: 341  LQESITILEEMKQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNC 162
            LQ+++ +L EMK   + PN+ITY+ILL+A E++D+ E+ + LFS+A  DG++P+++M  C
Sbjct: 800  LQKAMEVLSEMKALGLSPNSITYSILLVASEKKDDLEVGLVLFSQAKKDGISPNLLMSRC 859

Query: 161  VIGLCLRRYQHDSVLSAIIQRDETGNMQIHNQWTSQALLTYRQAISVGVKPT 6
            ++G CLRRY++ S L   +   + G  Q+ N+WTS AL+ YR  I+ GV PT
Sbjct: 860  ILGTCLRRYENASTLGEPVLSFDPGRPQVVNKWTSSALMVYRDTIAAGVTPT 911


>ref|XP_006423563.1| hypothetical protein CICLE_v10027915mg [Citrus clementina]
           gi|557525497|gb|ESR36803.1| hypothetical protein
           CICLE_v10027915mg [Citrus clementina]
          Length = 713

 Score =  181 bits (459), Expect = 9e-44
 Identities = 87/172 (50%), Positives = 119/172 (69%)
 Frame = -3

Query: 521 AKREGIRPGNIIYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGK 342
           AK +GI  G I YSSLMGAC N KNW+KA+ LYE +K   + PTVST+NALIT+ CD  +
Sbjct: 330 AKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQ 389

Query: 341 LQESITILEEMKQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNC 162
           L +++ +L +MK   + PN ITY+ILL+ACER+D+ E+ + L S+A  DGV P++VM  C
Sbjct: 390 LPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKC 449

Query: 161 VIGLCLRRYQHDSVLSAIIQRDETGNMQIHNQWTSQALLTYRQAISVGVKPT 6
           +IG+C RRY+    L+  +    +G  QI N+WTS AL+ YR+AI  G  PT
Sbjct: 450 IIGMCSRRYEKARTLNEHVLSFNSGRPQIENKWTSLALMVYREAIVAGTIPT 501



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
 Frame = -3

Query: 488 IYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGKLQESITILEEM 309
           +Y+  +  C  T +WE A  +Y+++   G+IP    ++ALI     AGK++ +  IL+E 
Sbjct: 271 VYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEA 330

Query: 308 KQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNCVI-GLC 147
           K + +    I+Y+ L+ AC      + A++L+    S  + P++   N +I  LC
Sbjct: 331 KNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALC 385


>ref|XP_006494589.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
           chloroplastic-like isoform X3 [Citrus sinensis]
          Length = 713

 Score =  180 bits (456), Expect = 2e-43
 Identities = 86/172 (50%), Positives = 118/172 (68%)
 Frame = -3

Query: 521 AKREGIRPGNIIYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGK 342
           AK +GI  G I YSSLMGAC N KNW+KA+ LYE +K   + PTVST+NALIT+ CD  +
Sbjct: 330 AKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDR 389

Query: 341 LQESITILEEMKQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNC 162
           L +++ +L +MK   + PN ITY+ILL+ACER+D+ E+ + L S+A  DGV P++VM  C
Sbjct: 390 LPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKC 449

Query: 161 VIGLCLRRYQHDSVLSAIIQRDETGNMQIHNQWTSQALLTYRQAISVGVKPT 6
           +IG+C RRY+    L+  +    +G  QI N+WTS  L+ YR+AI  G  PT
Sbjct: 450 IIGMCSRRYEKARTLNEHVLSFNSGRPQIENKWTSLVLMVYREAIVAGTIPT 501



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
 Frame = -3

Query: 488 IYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGKLQESITILEEM 309
           +Y+  +  C  T +WE A  +Y+++   G+IP    ++ALI     AGK++ +  IL+E 
Sbjct: 271 VYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEA 330

Query: 308 KQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNCVI-GLC 147
           K + +    I+Y+ L+ AC      + A++L+    S  + P++   N +I  LC
Sbjct: 331 KNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALC 385


>ref|XP_006494588.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 923

 Score =  180 bits (456), Expect = 2e-43
 Identities = 86/172 (50%), Positives = 118/172 (68%)
 Frame = -3

Query: 521  AKREGIRPGNIIYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGK 342
            AK +GI  G I YSSLMGAC N KNW+KA+ LYE +K   + PTVST+NALIT+ CD  +
Sbjct: 689  AKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDR 748

Query: 341  LQESITILEEMKQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNC 162
            L +++ +L +MK   + PN ITY+ILL+ACER+D+ E+ + L S+A  DGV P++VM  C
Sbjct: 749  LPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKC 808

Query: 161  VIGLCLRRYQHDSVLSAIIQRDETGNMQIHNQWTSQALLTYRQAISVGVKPT 6
            +IG+C RRY+    L+  +    +G  QI N+WTS  L+ YR+AI  G  PT
Sbjct: 809  IIGMCSRRYEKARTLNEHVLSFNSGRPQIENKWTSLVLMVYREAIVAGTIPT 860



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
 Frame = -3

Query: 488 IYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGKLQESITILEEM 309
           +Y+  +  C  T +WE A  +Y+++   G+IP    ++ALI     AGK++ +  IL+E 
Sbjct: 630 VYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEA 689

Query: 308 KQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNCVI-GLC 147
           K + +    I+Y+ L+ AC      + A++L+    S  + P++   N +I  LC
Sbjct: 690 KNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALC 744


>ref|XP_006494587.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like isoform X1 [Citrus sinensis]
          Length = 1072

 Score =  180 bits (456), Expect = 2e-43
 Identities = 86/172 (50%), Positives = 118/172 (68%)
 Frame = -3

Query: 521  AKREGIRPGNIIYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGK 342
            AK +GI  G I YSSLMGAC N KNW+KA+ LYE +K   + PTVST+NALIT+ CD  +
Sbjct: 689  AKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDR 748

Query: 341  LQESITILEEMKQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNC 162
            L +++ +L +MK   + PN ITY+ILL+ACER+D+ E+ + L S+A  DGV P++VM  C
Sbjct: 749  LPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKC 808

Query: 161  VIGLCLRRYQHDSVLSAIIQRDETGNMQIHNQWTSQALLTYRQAISVGVKPT 6
            +IG+C RRY+    L+  +    +G  QI N+WTS  L+ YR+AI  G  PT
Sbjct: 809  IIGMCSRRYEKARTLNEHVLSFNSGRPQIENKWTSLVLMVYREAIVAGTIPT 860



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
 Frame = -3

Query: 488 IYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGKLQESITILEEM 309
           +Y+  +  C  T +WE A  +Y+++   G+IP    ++ALI     AGK++ +  IL+E 
Sbjct: 630 VYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEA 689

Query: 308 KQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNCVI-GLC 147
           K + +    I+Y+ L+ AC      + A++L+    S  + P++   N +I  LC
Sbjct: 690 KNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALC 744


>ref|XP_006412181.1| hypothetical protein EUTSA_v10024275mg [Eutrema salsugineum]
            gi|557113351|gb|ESQ53634.1| hypothetical protein
            EUTSA_v10024275mg [Eutrema salsugineum]
          Length = 1086

 Score =  177 bits (449), Expect = 1e-42
 Identities = 83/172 (48%), Positives = 119/172 (69%)
 Frame = -3

Query: 521  AKREGIRPGNIIYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGK 342
            AK +GIR G I YSSLMGAC N KNW+KA+ LYE++K   +IPTVST+NALIT+ C+ G+
Sbjct: 704  AKSQGIRLGTISYSSLMGACCNAKNWKKALELYEKIKSIKLIPTVSTMNALITALCEGGQ 763

Query: 341  LQESITILEEMKQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNC 162
            L +++  L+E+K   + PN ITY++L++A ER+D+ E++ KL SRA  DG++P+ +MC C
Sbjct: 764  LPKAMEYLDEIKTLGLTPNTITYSMLMLASERKDDFEVSFKLLSRAKEDGISPNFIMCRC 823

Query: 161  VIGLCLRRYQHDSVLSAIIQRDETGNMQIHNQWTSQALLTYRQAISVGVKPT 6
            +  LC RR++        +    +G  QI N+WTS AL+ YR+ I  G  PT
Sbjct: 824  ITSLCKRRFEKACAAGEPVVSFRSGRPQIENKWTSMALMVYRETILGGTVPT 875


>ref|XP_003607170.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355508225|gb|AES89367.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1173

 Score =  176 bits (446), Expect = 3e-42
 Identities = 77/172 (44%), Positives = 122/172 (70%)
 Frame = -3

Query: 521  AKREGIRPGNIIYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGK 342
            A++EG++ G + YSSLMGAC   KNW++A+ LYE LK   ++ TVST+NAL+T+ CD  +
Sbjct: 788  ARKEGVQIGIMTYSSLMGACSKAKNWQRALELYEYLKSLKLVQTVSTVNALLTALCDGDQ 847

Query: 341  LQESITILEEMKQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNC 162
             Q+++ +L EMK   + PN+IT++IL++A E++D+ E A  L S+A  DG  P+++MC C
Sbjct: 848  FQKALEVLSEMKGLGLCPNSITFSILIVASEKKDDMEAAQMLLSQAKKDGAAPTLIMCRC 907

Query: 161  VIGLCLRRYQHDSVLSAIIQRDETGNMQIHNQWTSQALLTYRQAISVGVKPT 6
            +IG+CLRR++   ++   +   ++G  Q++N+WTS AL+ YR+ I  G KPT
Sbjct: 908  IIGMCLRRFEKACLVGETVLSFDSGRPQVNNEWTSLALMVYRETIGAGEKPT 959


>ref|XP_004505826.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
            chloroplastic-like [Cicer arietinum]
          Length = 1113

 Score =  174 bits (442), Expect = 8e-42
 Identities = 78/172 (45%), Positives = 121/172 (70%)
 Frame = -3

Query: 521  AKREGIRPGNIIYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGK 342
            A++ GI+ G + YSSLMGAC   +NW+KA+ LYE LK   ++ TVST+NAL+T+ CD  +
Sbjct: 728  ARKGGIQIGMMTYSSLMGACSKARNWQKALELYEHLKSLKLVQTVSTVNALLTALCDGDQ 787

Query: 341  LQESITILEEMKQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNC 162
             Q+++ +L EMK   + PN+IT++IL++A E++D+ E A  LFS+A  DG  P+++MC C
Sbjct: 788  FQKALEVLSEMKGLGLRPNSITFSILIVASEKKDDMEAAQMLFSQAKKDGAPPTLIMCRC 847

Query: 161  VIGLCLRRYQHDSVLSAIIQRDETGNMQIHNQWTSQALLTYRQAISVGVKPT 6
            +IG+CLRR++   ++   +   ++G  Q++N+WTS AL  YR+ I  G KPT
Sbjct: 848  IIGMCLRRFEKACLVGEPVLSFDSGRPQVNNEWTSLALTVYRETIGAGEKPT 899


>ref|XP_004231448.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
            chloroplastic-like [Solanum lycopersicum]
          Length = 1182

 Score =  173 bits (439), Expect = 2e-41
 Identities = 80/172 (46%), Positives = 119/172 (69%)
 Frame = -3

Query: 521  AKREGIRPGNIIYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGK 342
            A+ +GI  G+I YSSLMGAC N KNW+KA+ LYE++KG  + PTVS +NALIT+ C A +
Sbjct: 797  ARAKGINLGSISYSSLMGACCNAKNWQKALELYEDIKGINLKPTVSMMNALITALCYADQ 856

Query: 341  LQESITILEEMKQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNC 162
             Q+++ I  EMK+  + PN ITY+ LL+A E++D+ ++ + L S A  DGV P++VMC C
Sbjct: 857  YQKALEIFSEMKRVDLCPNTITYSTLLVASEKKDDLDVGLMLLSHAKKDGVAPNLVMCRC 916

Query: 161  VIGLCLRRYQHDSVLSAIIQRDETGNMQIHNQWTSQALLTYRQAISVGVKPT 6
            ++ +C RR+Q    L   +  + +G +Q+ ++WTS AL+ YR+ I  GV PT
Sbjct: 917  LLAMCSRRFQKACTLGEPVLSNNSGRLQLDSKWTSLALMVYRETIGAGVVPT 968



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
 Frame = -3

Query: 488  IYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGKLQESITILEEM 309
            +Y+  +  C    NWE A  +Y+++   G+ P    I+ALI      GKL+ +  +LEE 
Sbjct: 738  VYTIAVNCCSQNGNWEFARSIYDDMSKKGVNPDEMFISALIDVAGHTGKLEAAFEVLEEA 797

Query: 308  KQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNCVI-GLC 147
            + K +   +I+Y+ L+ AC      + A++L+       + P++ M N +I  LC
Sbjct: 798  RAKGINLGSISYSSLMGACCNAKNWQKALELYEDIKGINLKPTVSMMNALITALC 852


>ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
            chloroplastic-like [Vitis vinifera]
          Length = 1115

 Score =  172 bits (436), Expect = 4e-41
 Identities = 78/172 (45%), Positives = 121/172 (70%)
 Frame = -3

Query: 521  AKREGIRPGNIIYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGK 342
            A+ +GI  G + YSSLMGAC N KNW+KA+ LY ++K   + PTVST+NALIT+ C+  +
Sbjct: 730  ARIQGIPLGIVSYSSLMGACSNAKNWQKALELYVDIKSMKLNPTVSTMNALITALCEGEQ 789

Query: 341  LQESITILEEMKQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNC 162
            L++++ +L +MK+  + PN ITY+ILL+A E++D+ ++ + + S+A  D V P++VMC C
Sbjct: 790  LEKAMEVLSDMKRAGLCPNTITYSILLVASEKKDDIDVGLMILSQARKDSVAPNLVMCRC 849

Query: 161  VIGLCLRRYQHDSVLSAIIQRDETGNMQIHNQWTSQALLTYRQAISVGVKPT 6
            ++G+CLRR++    L   +    +G  QI N+WTS AL+ YR+ +S GV PT
Sbjct: 850  LVGMCLRRFEKACALGEPVLSFNSGRPQIDNKWTSSALMVYRETVSAGVIPT 901


>emb|CBI37948.3| unnamed protein product [Vitis vinifera]
          Length = 1550

 Score =  172 bits (436), Expect = 4e-41
 Identities = 78/172 (45%), Positives = 121/172 (70%)
 Frame = -3

Query: 521  AKREGIRPGNIIYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGK 342
            A+ +GI  G + YSSLMGAC N KNW+KA+ LY ++K   + PTVST+NALIT+ C+  +
Sbjct: 1165 ARIQGIPLGIVSYSSLMGACSNAKNWQKALELYVDIKSMKLNPTVSTMNALITALCEGEQ 1224

Query: 341  LQESITILEEMKQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNC 162
            L++++ +L +MK+  + PN ITY+ILL+A E++D+ ++ + + S+A  D V P++VMC C
Sbjct: 1225 LEKAMEVLSDMKRAGLCPNTITYSILLVASEKKDDIDVGLMILSQARKDSVAPNLVMCRC 1284

Query: 161  VIGLCLRRYQHDSVLSAIIQRDETGNMQIHNQWTSQALLTYRQAISVGVKPT 6
            ++G+CLRR++    L   +    +G  QI N+WTS AL+ YR+ +S GV PT
Sbjct: 1285 LVGMCLRRFEKACALGEPVLSFNSGRPQIDNKWTSSALMVYRETVSAGVIPT 1336


>ref|XP_006359637.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 1109

 Score =  172 bits (435), Expect = 5e-41
 Identities = 79/172 (45%), Positives = 119/172 (69%)
 Frame = -3

Query: 521  AKREGIRPGNIIYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGK 342
            A+ +GI  G+I YSSLMGAC N +NW+KA+ LYE++KG  + PTVS +NALIT+ C A +
Sbjct: 724  ARTKGINLGSISYSSLMGACCNAQNWQKALELYEDIKGINLKPTVSMMNALITALCYADQ 783

Query: 341  LQESITILEEMKQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNC 162
             Q+++ I  EMK+  + PN ITY+ LL+A E++D+ ++ + L S A  DGV P++VMC C
Sbjct: 784  YQKALEIFSEMKKVDLCPNTITYSTLLVASEKKDDLDVGLMLLSHAKKDGVAPNLVMCRC 843

Query: 161  VIGLCLRRYQHDSVLSAIIQRDETGNMQIHNQWTSQALLTYRQAISVGVKPT 6
            ++ +C RR+Q    L   +  + +G +Q+ ++WTS AL+ YR+ I  GV PT
Sbjct: 844  LLAMCSRRFQKACTLGEPVLSNNSGRLQLDSKWTSLALMVYRETIGAGVVPT 895



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
 Frame = -3

Query: 488  IYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGKLQESITILEEM 309
            +Y+  +  C    NWE A  +Y+++   G+ P    I+ALI      GKL+ +  +LEE 
Sbjct: 665  VYTIAVNCCSQNGNWEFARSIYDDMSKKGVNPDEMFISALIDVAGHTGKLEAAFEVLEEA 724

Query: 308  KQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNCVI-GLC 147
            + K +   +I+Y+ L+ AC      + A++L+       + P++ M N +I  LC
Sbjct: 725  RTKGINLGSISYSSLMGACCNAQNWQKALELYEDIKGINLKPTVSMMNALITALC 779


>ref|XP_006359636.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 1140

 Score =  172 bits (435), Expect = 5e-41
 Identities = 79/172 (45%), Positives = 119/172 (69%)
 Frame = -3

Query: 521  AKREGIRPGNIIYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGK 342
            A+ +GI  G+I YSSLMGAC N +NW+KA+ LYE++KG  + PTVS +NALIT+ C A +
Sbjct: 755  ARTKGINLGSISYSSLMGACCNAQNWQKALELYEDIKGINLKPTVSMMNALITALCYADQ 814

Query: 341  LQESITILEEMKQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNC 162
             Q+++ I  EMK+  + PN ITY+ LL+A E++D+ ++ + L S A  DGV P++VMC C
Sbjct: 815  YQKALEIFSEMKKVDLCPNTITYSTLLVASEKKDDLDVGLMLLSHAKKDGVAPNLVMCRC 874

Query: 161  VIGLCLRRYQHDSVLSAIIQRDETGNMQIHNQWTSQALLTYRQAISVGVKPT 6
            ++ +C RR+Q    L   +  + +G +Q+ ++WTS AL+ YR+ I  GV PT
Sbjct: 875  LLAMCSRRFQKACTLGEPVLSNNSGRLQLDSKWTSLALMVYRETIGAGVVPT 926



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
 Frame = -3

Query: 488  IYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGKLQESITILEEM 309
            +Y+  +  C    NWE A  +Y+++   G+ P    I+ALI      GKL+ +  +LEE 
Sbjct: 696  VYTIAVNCCSQNGNWEFARSIYDDMSKKGVNPDEMFISALIDVAGHTGKLEAAFEVLEEA 755

Query: 308  KQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNCVI-GLC 147
            + K +   +I+Y+ L+ AC      + A++L+       + P++ M N +I  LC
Sbjct: 756  RTKGINLGSISYSSLMGACCNAQNWQKALELYEDIKGINLKPTVSMMNALITALC 810


>ref|XP_004292148.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 1028

 Score =  172 bits (435), Expect = 5e-41
 Identities = 83/172 (48%), Positives = 118/172 (68%)
 Frame = -3

Query: 521  AKREGIRPGNIIYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGK 342
            A   GI+ G + YSSLMGAC N KNW+KA+ LYE+LK A I  TVSTINALIT+ CD  +
Sbjct: 642  ASNRGIQVGTVSYSSLMGACSNAKNWQKALELYEDLKSAKIEQTVSTINALITALCDGDQ 701

Query: 341  LQESITILEEMKQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNC 162
            LQ+++ +L EMK   + PN+ITY+IL++A E++D+ E  + L S+A  D V P++VMC C
Sbjct: 702  LQKAMEVLSEMKSIGLRPNSITYSILVVASEKKDDLEAGLMLLSQAEMDKVVPNLVMCRC 761

Query: 161  VIGLCLRRYQHDSVLSAIIQRDETGNMQIHNQWTSQALLTYRQAISVGVKPT 6
            +IG+CLRR +    L   +   ++G  Q+ ++W+S AL+ YR+ I  G  PT
Sbjct: 762  IIGMCLRRSEKACTLGEPVLPLDSGRPQVDSKWSSVALMVYRKTIVAGTTPT 813


>ref|NP_195209.2| pentatricopeptide repeat protein MRL1 [Arabidopsis thaliana]
            gi|223635623|sp|Q0WLC6.2|PP349_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein MRL1,
            chloroplastic; AltName: Full=Protein MATURATION OF RBCL
            1; Short=AtMRL1; Flags: Precursor
            gi|332661026|gb|AEE86426.1| pentatricopeptide repeat
            protein MRL1 [Arabidopsis thaliana]
          Length = 1089

 Score =  171 bits (432), Expect = 1e-40
 Identities = 80/172 (46%), Positives = 120/172 (69%)
 Frame = -3

Query: 521  AKREGIRPGNIIYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGK 342
            AK +GIR G I YSSLMGAC N K+W+KA+ LYE++K   + PT+ST+NALIT+ C+  +
Sbjct: 705  AKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQ 764

Query: 341  LQESITILEEMKQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNC 162
            L +++  L+E+K   + PN ITY++L++A ER+D+ E++ KL S+A  DGV+P+++MC C
Sbjct: 765  LPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRC 824

Query: 161  VIGLCLRRYQHDSVLSAIIQRDETGNMQIHNQWTSQALLTYRQAISVGVKPT 6
            +  LC RR++        +   ++G  QI N+WTS AL+ YR+ IS G  PT
Sbjct: 825  ITSLCKRRFEKACAGGEPVVSFKSGRPQIENKWTSMALMVYRETISGGTVPT 876


>dbj|BAE98839.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1089

 Score =  171 bits (432), Expect = 1e-40
 Identities = 80/172 (46%), Positives = 120/172 (69%)
 Frame = -3

Query: 521  AKREGIRPGNIIYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGK 342
            AK +GIR G I YSSLMGAC N K+W+KA+ LYE++K   + PT+ST+NALIT+ C+  +
Sbjct: 705  AKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQ 764

Query: 341  LQESITILEEMKQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNC 162
            L +++  L+E+K   + PN ITY++L++A ER+D+ E++ KL S+A  DGV+P+++MC C
Sbjct: 765  LPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRC 824

Query: 161  VIGLCLRRYQHDSVLSAIIQRDETGNMQIHNQWTSQALLTYRQAISVGVKPT 6
            +  LC RR++        +   ++G  QI N+WTS AL+ YR+ IS G  PT
Sbjct: 825  ITSLCKRRFEKACAGGEPVVSFKSGRPQIENKWTSMALMVYRETISGGTVPT 876


>dbj|BAF02081.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1089

 Score =  171 bits (432), Expect = 1e-40
 Identities = 80/172 (46%), Positives = 120/172 (69%)
 Frame = -3

Query: 521  AKREGIRPGNIIYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGK 342
            AK +GIR G I YSSLMGAC N K+W+KA+ LYE++K   + PT+ST+NALIT+ C+  +
Sbjct: 705  AKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQ 764

Query: 341  LQESITILEEMKQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNC 162
            L +++  L+E+K   + PN ITY++L++A ER+D+ E++ KL S+A  DGV+P+++MC C
Sbjct: 765  LPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRC 824

Query: 161  VIGLCLRRYQHDSVLSAIIQRDETGNMQIHNQWTSQALLTYRQAISVGVKPT 6
            +  LC RR++        +   ++G  QI N+WTS AL+ YR+ IS G  PT
Sbjct: 825  ITSLCKRRFEKACAGGEPVVSFKSGRPQIENKWTSMALMVYRETISGGTVPT 876


>gb|EOX97788.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
            cacao]
          Length = 1110

 Score =  170 bits (430), Expect = 2e-40
 Identities = 80/172 (46%), Positives = 116/172 (67%)
 Frame = -3

Query: 521  AKREGIRPGNIIYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGK 342
            AK +GI  G + YSSLMGAC N +NW+KA+ LYE +K   +  TVST+NALITS C+A +
Sbjct: 725  AKNQGINVGIVSYSSLMGACSNARNWQKALELYENIKAVKLNLTVSTVNALITSLCEADQ 784

Query: 341  LQESITILEEMKQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNC 162
            L +++ IL EM++  + PN +TY+ILL+A ER+D+ E+ + L S+A  DGV P+++M  C
Sbjct: 785  LPKAMEILSEMEELGLCPNTVTYSILLVASERKDDLEVGLMLLSQARKDGVAPNLIMARC 844

Query: 161  VIGLCLRRYQHDSVLSAIIQRDETGNMQIHNQWTSQALLTYRQAISVGVKPT 6
            +IG+CLRR++    +   +    +G   I N+WTS AL  YR+ I  G  PT
Sbjct: 845  IIGMCLRRFEKACKVGEPVLSFNSGQPHIENKWTSVALAVYRETIVAGTAPT 896



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 35/134 (26%), Positives = 64/134 (47%)
 Frame = -3

Query: 488  IYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGKLQESITILEEM 309
            +Y+  +  C  T +WE A  +Y ++KG G+ P    I+ALI     AGKL  +  ILEE 
Sbjct: 666  VYTIAVNCCSQTGDWEFACSVYSDMKGKGVAPDEVFISALIDVAGHAGKLDAAFEILEEA 725

Query: 308  KQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNCVIGLCLRRYQH 129
            K + +    ++Y+ L+ AC      + A++L+    +  +  ++   N +I       Q 
Sbjct: 726  KNQGINVGIVSYSSLMGACSNARNWQKALELYENIKAVKLNLTVSTVNALITSLCEADQL 785

Query: 128  DSVLSAIIQRDETG 87
               +  + + +E G
Sbjct: 786  PKAMEILSEMEELG 799


>ref|XP_006286114.1| hypothetical protein CARUB_v10007663mg [Capsella rubella]
            gi|482554819|gb|EOA19012.1| hypothetical protein
            CARUB_v10007663mg [Capsella rubella]
          Length = 1122

 Score =  170 bits (430), Expect = 2e-40
 Identities = 80/172 (46%), Positives = 118/172 (68%)
 Frame = -3

Query: 521  AKREGIRPGNIIYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGK 342
            AK +GIR G I YSSLMGAC N K+W+KA+ LYE++K   + PTVST+NALIT+ C+  +
Sbjct: 739  AKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIRLRPTVSTMNALITALCEGNQ 798

Query: 341  LQESITILEEMKQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNC 162
            L +++  L E+K   + PN ITY++L++A ER+D+ E++ KL S+A  DG++P+ +MC C
Sbjct: 799  LPKAMEFLNEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKEDGISPNFIMCRC 858

Query: 161  VIGLCLRRYQHDSVLSAIIQRDETGNMQIHNQWTSQALLTYRQAISVGVKPT 6
            +  LC RR++        +   ++G  QI N+WTS AL+ YR+ IS G  PT
Sbjct: 859  ITSLCKRRFEKACAGGEPVVSFQSGRPQIENKWTSMALMVYRETISGGTVPT 910



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/122 (27%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
 Frame = -3

Query: 509  GIRPGNIIYSSLMGACRNTKNWEKAMGLYEELKGAGIIPTVSTINALITSFCDAGKLQES 330
            GI+    +Y+  + +C  + +WE A  +Y+++K  G+ P     +ALI     A  L E+
Sbjct: 673  GIKGTPEVYTIAVNSCSKSGDWEFACSIYKDMKEKGVTPDEVFFSALIDVAGHAKMLDEA 732

Query: 329  ITILEEMKQKTVLPNNITYTILLMACEREDEPELAIKLFSRALSDGVTPSIVMCNCVI-G 153
              IL++ K + +    I+Y+ L+ AC    + + A++L+ +  S  + P++   N +I  
Sbjct: 733  FGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIRLRPTVSTMNALITA 792

Query: 152  LC 147
            LC
Sbjct: 793  LC 794