BLASTX nr result
ID: Ephedra25_contig00018032
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00018032
(523 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006840107.1| hypothetical protein AMTR_s00224p00011500 [A... 189 4e-46
gb|EXB36850.1| hypothetical protein L484_003235 [Morus notabilis] 179 3e-43
ref|XP_006423563.1| hypothetical protein CICLE_v10027915mg [Citr... 178 6e-43
ref|XP_006494589.1| PREDICTED: pentatricopeptide repeat-containi... 177 1e-42
ref|XP_006494588.1| PREDICTED: pentatricopeptide repeat-containi... 177 1e-42
ref|XP_006494587.1| PREDICTED: pentatricopeptide repeat-containi... 177 1e-42
ref|XP_003607170.1| Pentatricopeptide repeat-containing protein ... 175 5e-42
ref|XP_006412181.1| hypothetical protein EUTSA_v10024275mg [Eutr... 174 1e-41
ref|XP_004505826.1| PREDICTED: pentatricopeptide repeat-containi... 172 4e-41
ref|XP_004231448.1| PREDICTED: pentatricopeptide repeat-containi... 171 7e-41
ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containi... 170 2e-40
emb|CBI37948.3| unnamed protein product [Vitis vinifera] 170 2e-40
ref|XP_006359637.1| PREDICTED: pentatricopeptide repeat-containi... 170 2e-40
ref|XP_006359636.1| PREDICTED: pentatricopeptide repeat-containi... 170 2e-40
ref|XP_004292148.1| PREDICTED: pentatricopeptide repeat-containi... 169 3e-40
ref|NP_195209.2| pentatricopeptide repeat protein MRL1 [Arabidop... 168 6e-40
dbj|BAE98839.1| hypothetical protein [Arabidopsis thaliana] 168 6e-40
dbj|BAF02081.1| hypothetical protein [Arabidopsis thaliana] 168 6e-40
gb|EOX97788.1| Pentatricopeptide repeat-containing protein, puta... 167 1e-39
ref|XP_002534048.1| pentatricopeptide repeat-containing protein,... 167 1e-39
>ref|XP_006840107.1| hypothetical protein AMTR_s00224p00011500 [Amborella trichopoda]
gi|548841763|gb|ERN01782.1| hypothetical protein
AMTR_s00224p00011500 [Amborella trichopoda]
Length = 1185
Score = 189 bits (479), Expect = 4e-46
Identities = 85/172 (49%), Positives = 125/172 (72%)
Frame = -3
Query: 521 AKREGIRPGNIIYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGK 342
AK GI+ GNI+YSS+MGACR+ K+W++A+ELYE++K ++PTVST+NALITS C+ +
Sbjct: 776 AKNHGIQIGNILYSSVMGACRHAKSWQRALELYEDIKSIKLLPTVSTLNALITSLCEGDQ 835
Query: 341 LQESITILEEMKQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNC 162
L +++ +LEE ++ + PN+ITY+IL + CE++DE + A+KL S + DG+ +L++C C
Sbjct: 836 LHKAVEVLEETREAGMCPNSITYSILFVECEKKDETECALKLLSYSKKDGIGVNLIMCGC 895
Query: 161 VIGLCLRRYQHDSVLSATIQRDETRNMQIHNQWTSQALLTYRQAISLGVKPT 6
GLCLRRY+ S L I + N QI NQWTS AL+ YR+ +S G+ PT
Sbjct: 896 FTGLCLRRYEKASALGEPILAFSSGNAQIDNQWTSWALMVYRETVSAGIIPT 947
>gb|EXB36850.1| hypothetical protein L484_003235 [Morus notabilis]
Length = 1125
Score = 179 bits (454), Expect = 3e-43
Identities = 83/172 (48%), Positives = 122/172 (70%)
Frame = -3
Query: 521 AKREGIRPGNIIYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGK 342
AK G++ G + YSSLMGAC N KNW+KA+ELYE+LK TVST+NALIT+ CD +
Sbjct: 740 AKNRGVKFGTVSYSSLMGACSNAKNWQKALELYEDLKSTKSEQTVSTVNALITALCDGDQ 799
Query: 341 LQESITILEEMKQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNC 162
LQ+++ +L EMK + PN+ITY+ILL+A E++D+ ++ + LFS+A DG++P+L++ C
Sbjct: 800 LQKAMEVLSEMKALGLSPNSITYSILLVASEKKDDLEVGLVLFSQAKKDGISPNLLMSRC 859
Query: 161 VIGLCLRRYQHDSVLSATIQRDETRNMQIHNQWTSQALLTYRQAISLGVKPT 6
++G CLRRY++ S L + + Q+ N+WTS AL+ YR I+ GV PT
Sbjct: 860 ILGTCLRRYENASTLGEPVLSFDPGRPQVVNKWTSSALMVYRDTIAAGVTPT 911
>ref|XP_006423563.1| hypothetical protein CICLE_v10027915mg [Citrus clementina]
gi|557525497|gb|ESR36803.1| hypothetical protein
CICLE_v10027915mg [Citrus clementina]
Length = 713
Score = 178 bits (452), Expect = 6e-43
Identities = 86/172 (50%), Positives = 119/172 (69%)
Frame = -3
Query: 521 AKREGIRPGNIIYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGK 342
AK +GI G I YSSLMGAC N KNW+KA+ELYE +K + PTVST+NALIT+ CD +
Sbjct: 330 AKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQ 389
Query: 341 LQESITILEEMKQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNC 162
L +++ +L +MK + PN ITY+ILL+ACER+D+ ++ + L S+A DGV P+LV+ C
Sbjct: 390 LPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKC 449
Query: 161 VIGLCLRRYQHDSVLSATIQRDETRNMQIHNQWTSQALLTYRQAISLGVKPT 6
+IG+C RRY+ L+ + + QI N+WTS AL+ YR+AI G PT
Sbjct: 450 IIGMCSRRYEKARTLNEHVLSFNSGRPQIENKWTSLALMVYREAIVAGTIPT 501
Score = 60.1 bits (144), Expect = 3e-07
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Frame = -3
Query: 488 IYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGKLQESITILEEM 309
+Y+ + C T +WE A +Y+++ G+IP ++ALI AGK++ + IL+E
Sbjct: 271 VYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEA 330
Query: 308 KQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNCVI-GLC 147
K + + I+Y+ L+ AC + A++L+ S + P++ N +I LC
Sbjct: 331 KNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALC 385
>ref|XP_006494589.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic-like isoform X3 [Citrus sinensis]
Length = 713
Score = 177 bits (449), Expect = 1e-42
Identities = 85/172 (49%), Positives = 118/172 (68%)
Frame = -3
Query: 521 AKREGIRPGNIIYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGK 342
AK +GI G I YSSLMGAC N KNW+KA+ELYE +K + PTVST+NALIT+ CD +
Sbjct: 330 AKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDR 389
Query: 341 LQESITILEEMKQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNC 162
L +++ +L +MK + PN ITY+ILL+ACER+D+ ++ + L S+A DGV P+LV+ C
Sbjct: 390 LPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKC 449
Query: 161 VIGLCLRRYQHDSVLSATIQRDETRNMQIHNQWTSQALLTYRQAISLGVKPT 6
+IG+C RRY+ L+ + + QI N+WTS L+ YR+AI G PT
Sbjct: 450 IIGMCSRRYEKARTLNEHVLSFNSGRPQIENKWTSLVLMVYREAIVAGTIPT 501
Score = 60.1 bits (144), Expect = 3e-07
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Frame = -3
Query: 488 IYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGKLQESITILEEM 309
+Y+ + C T +WE A +Y+++ G+IP ++ALI AGK++ + IL+E
Sbjct: 271 VYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEA 330
Query: 308 KQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNCVI-GLC 147
K + + I+Y+ L+ AC + A++L+ S + P++ N +I LC
Sbjct: 331 KNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALC 385
>ref|XP_006494588.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic-like isoform X2 [Citrus sinensis]
Length = 923
Score = 177 bits (449), Expect = 1e-42
Identities = 85/172 (49%), Positives = 118/172 (68%)
Frame = -3
Query: 521 AKREGIRPGNIIYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGK 342
AK +GI G I YSSLMGAC N KNW+KA+ELYE +K + PTVST+NALIT+ CD +
Sbjct: 689 AKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDR 748
Query: 341 LQESITILEEMKQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNC 162
L +++ +L +MK + PN ITY+ILL+ACER+D+ ++ + L S+A DGV P+LV+ C
Sbjct: 749 LPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKC 808
Query: 161 VIGLCLRRYQHDSVLSATIQRDETRNMQIHNQWTSQALLTYRQAISLGVKPT 6
+IG+C RRY+ L+ + + QI N+WTS L+ YR+AI G PT
Sbjct: 809 IIGMCSRRYEKARTLNEHVLSFNSGRPQIENKWTSLVLMVYREAIVAGTIPT 860
Score = 60.1 bits (144), Expect = 3e-07
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Frame = -3
Query: 488 IYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGKLQESITILEEM 309
+Y+ + C T +WE A +Y+++ G+IP ++ALI AGK++ + IL+E
Sbjct: 630 VYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEA 689
Query: 308 KQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNCVI-GLC 147
K + + I+Y+ L+ AC + A++L+ S + P++ N +I LC
Sbjct: 690 KNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALC 744
>ref|XP_006494587.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic-like isoform X1 [Citrus sinensis]
Length = 1072
Score = 177 bits (449), Expect = 1e-42
Identities = 85/172 (49%), Positives = 118/172 (68%)
Frame = -3
Query: 521 AKREGIRPGNIIYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGK 342
AK +GI G I YSSLMGAC N KNW+KA+ELYE +K + PTVST+NALIT+ CD +
Sbjct: 689 AKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDR 748
Query: 341 LQESITILEEMKQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNC 162
L +++ +L +MK + PN ITY+ILL+ACER+D+ ++ + L S+A DGV P+LV+ C
Sbjct: 749 LPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKC 808
Query: 161 VIGLCLRRYQHDSVLSATIQRDETRNMQIHNQWTSQALLTYRQAISLGVKPT 6
+IG+C RRY+ L+ + + QI N+WTS L+ YR+AI G PT
Sbjct: 809 IIGMCSRRYEKARTLNEHVLSFNSGRPQIENKWTSLVLMVYREAIVAGTIPT 860
Score = 60.1 bits (144), Expect = 3e-07
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Frame = -3
Query: 488 IYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGKLQESITILEEM 309
+Y+ + C T +WE A +Y+++ G+IP ++ALI AGK++ + IL+E
Sbjct: 630 VYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEA 689
Query: 308 KQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNCVI-GLC 147
K + + I+Y+ L+ AC + A++L+ S + P++ N +I LC
Sbjct: 690 KNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALC 744
>ref|XP_003607170.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508225|gb|AES89367.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1173
Score = 175 bits (444), Expect = 5e-42
Identities = 77/172 (44%), Positives = 123/172 (71%)
Frame = -3
Query: 521 AKREGIRPGNIIYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGK 342
A++EG++ G + YSSLMGAC KNW++A+ELYE LK ++ TVST+NAL+T+ CD +
Sbjct: 788 ARKEGVQIGIMTYSSLMGACSKAKNWQRALELYEYLKSLKLVQTVSTVNALLTALCDGDQ 847
Query: 341 LQESITILEEMKQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNC 162
Q+++ +L EMK + PN+IT++IL++A E++D+ + A L S+A DG P+L++C C
Sbjct: 848 FQKALEVLSEMKGLGLCPNSITFSILIVASEKKDDMEAAQMLLSQAKKDGAAPTLIMCRC 907
Query: 161 VIGLCLRRYQHDSVLSATIQRDETRNMQIHNQWTSQALLTYRQAISLGVKPT 6
+IG+CLRR++ ++ T+ ++ Q++N+WTS AL+ YR+ I G KPT
Sbjct: 908 IIGMCLRRFEKACLVGETVLSFDSGRPQVNNEWTSLALMVYRETIGAGEKPT 959
>ref|XP_006412181.1| hypothetical protein EUTSA_v10024275mg [Eutrema salsugineum]
gi|557113351|gb|ESQ53634.1| hypothetical protein
EUTSA_v10024275mg [Eutrema salsugineum]
Length = 1086
Score = 174 bits (441), Expect = 1e-41
Identities = 81/172 (47%), Positives = 119/172 (69%)
Frame = -3
Query: 521 AKREGIRPGNIIYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGK 342
AK +GIR G I YSSLMGAC N KNW+KA+ELYE++K +IPTVST+NALIT+ C+ G+
Sbjct: 704 AKSQGIRLGTISYSSLMGACCNAKNWKKALELYEKIKSIKLIPTVSTMNALITALCEGGQ 763
Query: 341 LQESITILEEMKQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNC 162
L +++ L+E+K + PN ITY++L++A ER+D+ +++ KL SRA DG++P+ ++C C
Sbjct: 764 LPKAMEYLDEIKTLGLTPNTITYSMLMLASERKDDFEVSFKLLSRAKEDGISPNFIMCRC 823
Query: 161 VIGLCLRRYQHDSVLSATIQRDETRNMQIHNQWTSQALLTYRQAISLGVKPT 6
+ LC RR++ + + QI N+WTS AL+ YR+ I G PT
Sbjct: 824 ITSLCKRRFEKACAAGEPVVSFRSGRPQIENKWTSMALMVYRETILGGTVPT 875
>ref|XP_004505826.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Cicer arietinum]
Length = 1113
Score = 172 bits (436), Expect = 4e-41
Identities = 77/172 (44%), Positives = 121/172 (70%)
Frame = -3
Query: 521 AKREGIRPGNIIYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGK 342
A++ GI+ G + YSSLMGAC +NW+KA+ELYE LK ++ TVST+NAL+T+ CD +
Sbjct: 728 ARKGGIQIGMMTYSSLMGACSKARNWQKALELYEHLKSLKLVQTVSTVNALLTALCDGDQ 787
Query: 341 LQESITILEEMKQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNC 162
Q+++ +L EMK + PN+IT++IL++A E++D+ + A LFS+A DG P+L++C C
Sbjct: 788 FQKALEVLSEMKGLGLRPNSITFSILIVASEKKDDMEAAQMLFSQAKKDGAPPTLIMCRC 847
Query: 161 VIGLCLRRYQHDSVLSATIQRDETRNMQIHNQWTSQALLTYRQAISLGVKPT 6
+IG+CLRR++ ++ + ++ Q++N+WTS AL YR+ I G KPT
Sbjct: 848 IIGMCLRRFEKACLVGEPVLSFDSGRPQVNNEWTSLALTVYRETIGAGEKPT 899
>ref|XP_004231448.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Solanum lycopersicum]
Length = 1182
Score = 171 bits (434), Expect = 7e-41
Identities = 80/172 (46%), Positives = 118/172 (68%)
Frame = -3
Query: 521 AKREGIRPGNIIYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGK 342
A+ +GI G+I YSSLMGAC N KNW+KA+ELYE++KG + PTVS +NALIT+ C A +
Sbjct: 797 ARAKGINLGSISYSSLMGACCNAKNWQKALELYEDIKGINLKPTVSMMNALITALCYADQ 856
Query: 341 LQESITILEEMKQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNC 162
Q+++ I EMK+ + PN ITY+ LL+A E++D+ + + L S A DGV P+LV+C C
Sbjct: 857 YQKALEIFSEMKRVDLCPNTITYSTLLVASEKKDDLDVGLMLLSHAKKDGVAPNLVMCRC 916
Query: 161 VIGLCLRRYQHDSVLSATIQRDETRNMQIHNQWTSQALLTYRQAISLGVKPT 6
++ +C RR+Q L + + + +Q+ ++WTS AL+ YR+ I GV PT
Sbjct: 917 LLAMCSRRFQKACTLGEPVLSNNSGRLQLDSKWTSLALMVYRETIGAGVVPT 968
Score = 58.2 bits (139), Expect = 1e-06
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Frame = -3
Query: 488 IYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGKLQESITILEEM 309
+Y+ + C NWE A +Y+++ G+ P I+ALI GKL+ + +LEE
Sbjct: 738 VYTIAVNCCSQNGNWEFARSIYDDMSKKGVNPDEMFISALIDVAGHTGKLEAAFEVLEEA 797
Query: 308 KQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNCVI-GLC 147
+ K + +I+Y+ L+ AC + A++L+ + P++ + N +I LC
Sbjct: 798 RAKGINLGSISYSSLMGACCNAKNWQKALELYEDIKGINLKPTVSMMNALITALC 852
Score = 55.5 bits (132), Expect = 7e-06
Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 2/136 (1%)
Frame = -3
Query: 518 KREGIRPGNIIYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGKL 339
+ G++P +Y++L+ C + E++ E+ AG+ P +T ALI AG++
Sbjct: 586 RETGLKPDCKLYTTLISTCAKAGKVDTMFEVFHEMVNAGVEPNANTYGALIDGCAKAGQV 645
Query: 338 QESITILEEMKQKTVLPNNITYTILLMACEREDEPKLAIKLFS--RALSDGVTPSLVICN 165
++ M+ K V P+ + + L+ AC + A + S +A + + P +
Sbjct: 646 AKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLSEMKAEARPIEPDQITIG 705
Query: 164 CVIGLCLRRYQHDSVL 117
++ C Q D L
Sbjct: 706 ALMKACANSGQVDRAL 721
>ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Vitis vinifera]
Length = 1115
Score = 170 bits (431), Expect = 2e-40
Identities = 78/172 (45%), Positives = 120/172 (69%)
Frame = -3
Query: 521 AKREGIRPGNIIYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGK 342
A+ +GI G + YSSLMGAC N KNW+KA+ELY ++K + PTVST+NALIT+ C+ +
Sbjct: 730 ARIQGIPLGIVSYSSLMGACSNAKNWQKALELYVDIKSMKLNPTVSTMNALITALCEGEQ 789
Query: 341 LQESITILEEMKQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNC 162
L++++ +L +MK+ + PN ITY+ILL+A E++D+ + + + S+A D V P+LV+C C
Sbjct: 790 LEKAMEVLSDMKRAGLCPNTITYSILLVASEKKDDIDVGLMILSQARKDSVAPNLVMCRC 849
Query: 161 VIGLCLRRYQHDSVLSATIQRDETRNMQIHNQWTSQALLTYRQAISLGVKPT 6
++G+CLRR++ L + + QI N+WTS AL+ YR+ +S GV PT
Sbjct: 850 LVGMCLRRFEKACALGEPVLSFNSGRPQIDNKWTSSALMVYRETVSAGVIPT 901
>emb|CBI37948.3| unnamed protein product [Vitis vinifera]
Length = 1550
Score = 170 bits (431), Expect = 2e-40
Identities = 78/172 (45%), Positives = 120/172 (69%)
Frame = -3
Query: 521 AKREGIRPGNIIYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGK 342
A+ +GI G + YSSLMGAC N KNW+KA+ELY ++K + PTVST+NALIT+ C+ +
Sbjct: 1165 ARIQGIPLGIVSYSSLMGACSNAKNWQKALELYVDIKSMKLNPTVSTMNALITALCEGEQ 1224
Query: 341 LQESITILEEMKQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNC 162
L++++ +L +MK+ + PN ITY+ILL+A E++D+ + + + S+A D V P+LV+C C
Sbjct: 1225 LEKAMEVLSDMKRAGLCPNTITYSILLVASEKKDDIDVGLMILSQARKDSVAPNLVMCRC 1284
Query: 161 VIGLCLRRYQHDSVLSATIQRDETRNMQIHNQWTSQALLTYRQAISLGVKPT 6
++G+CLRR++ L + + QI N+WTS AL+ YR+ +S GV PT
Sbjct: 1285 LVGMCLRRFEKACALGEPVLSFNSGRPQIDNKWTSSALMVYRETVSAGVIPT 1336
>ref|XP_006359637.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic-like isoform X2 [Solanum tuberosum]
Length = 1109
Score = 170 bits (430), Expect = 2e-40
Identities = 79/172 (45%), Positives = 118/172 (68%)
Frame = -3
Query: 521 AKREGIRPGNIIYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGK 342
A+ +GI G+I YSSLMGAC N +NW+KA+ELYE++KG + PTVS +NALIT+ C A +
Sbjct: 724 ARTKGINLGSISYSSLMGACCNAQNWQKALELYEDIKGINLKPTVSMMNALITALCYADQ 783
Query: 341 LQESITILEEMKQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNC 162
Q+++ I EMK+ + PN ITY+ LL+A E++D+ + + L S A DGV P+LV+C C
Sbjct: 784 YQKALEIFSEMKKVDLCPNTITYSTLLVASEKKDDLDVGLMLLSHAKKDGVAPNLVMCRC 843
Query: 161 VIGLCLRRYQHDSVLSATIQRDETRNMQIHNQWTSQALLTYRQAISLGVKPT 6
++ +C RR+Q L + + + +Q+ ++WTS AL+ YR+ I GV PT
Sbjct: 844 LLAMCSRRFQKACTLGEPVLSNNSGRLQLDSKWTSLALMVYRETIGAGVVPT 895
Score = 58.5 bits (140), Expect = 9e-07
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Frame = -3
Query: 488 IYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGKLQESITILEEM 309
+Y+ + C NWE A +Y+++ G+ P I+ALI GKL+ + +LEE
Sbjct: 665 VYTIAVNCCSQNGNWEFARSIYDDMSKKGVNPDEMFISALIDVAGHTGKLEAAFEVLEEA 724
Query: 308 KQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNCVI-GLC 147
+ K + +I+Y+ L+ AC + A++L+ + P++ + N +I LC
Sbjct: 725 RTKGINLGSISYSSLMGACCNAQNWQKALELYEDIKGINLKPTVSMMNALITALC 779
>ref|XP_006359636.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic-like isoform X1 [Solanum tuberosum]
Length = 1140
Score = 170 bits (430), Expect = 2e-40
Identities = 79/172 (45%), Positives = 118/172 (68%)
Frame = -3
Query: 521 AKREGIRPGNIIYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGK 342
A+ +GI G+I YSSLMGAC N +NW+KA+ELYE++KG + PTVS +NALIT+ C A +
Sbjct: 755 ARTKGINLGSISYSSLMGACCNAQNWQKALELYEDIKGINLKPTVSMMNALITALCYADQ 814
Query: 341 LQESITILEEMKQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNC 162
Q+++ I EMK+ + PN ITY+ LL+A E++D+ + + L S A DGV P+LV+C C
Sbjct: 815 YQKALEIFSEMKKVDLCPNTITYSTLLVASEKKDDLDVGLMLLSHAKKDGVAPNLVMCRC 874
Query: 161 VIGLCLRRYQHDSVLSATIQRDETRNMQIHNQWTSQALLTYRQAISLGVKPT 6
++ +C RR+Q L + + + +Q+ ++WTS AL+ YR+ I GV PT
Sbjct: 875 LLAMCSRRFQKACTLGEPVLSNNSGRLQLDSKWTSLALMVYRETIGAGVVPT 926
Score = 58.5 bits (140), Expect = 9e-07
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Frame = -3
Query: 488 IYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGKLQESITILEEM 309
+Y+ + C NWE A +Y+++ G+ P I+ALI GKL+ + +LEE
Sbjct: 696 VYTIAVNCCSQNGNWEFARSIYDDMSKKGVNPDEMFISALIDVAGHTGKLEAAFEVLEEA 755
Query: 308 KQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNCVI-GLC 147
+ K + +I+Y+ L+ AC + A++L+ + P++ + N +I LC
Sbjct: 756 RTKGINLGSISYSSLMGACCNAQNWQKALELYEDIKGINLKPTVSMMNALITALC 810
>ref|XP_004292148.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 1028
Score = 169 bits (429), Expect = 3e-40
Identities = 82/172 (47%), Positives = 118/172 (68%)
Frame = -3
Query: 521 AKREGIRPGNIIYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGK 342
A GI+ G + YSSLMGAC N KNW+KA+ELYE+LK A I TVSTINALIT+ CD +
Sbjct: 642 ASNRGIQVGTVSYSSLMGACSNAKNWQKALELYEDLKSAKIEQTVSTINALITALCDGDQ 701
Query: 341 LQESITILEEMKQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNC 162
LQ+++ +L EMK + PN+ITY+IL++A E++D+ + + L S+A D V P+LV+C C
Sbjct: 702 LQKAMEVLSEMKSIGLRPNSITYSILVVASEKKDDLEAGLMLLSQAEMDKVVPNLVMCRC 761
Query: 161 VIGLCLRRYQHDSVLSATIQRDETRNMQIHNQWTSQALLTYRQAISLGVKPT 6
+IG+CLRR + L + ++ Q+ ++W+S AL+ YR+ I G PT
Sbjct: 762 IIGMCLRRSEKACTLGEPVLPLDSGRPQVDSKWSSVALMVYRKTIVAGTTPT 813
>ref|NP_195209.2| pentatricopeptide repeat protein MRL1 [Arabidopsis thaliana]
gi|223635623|sp|Q0WLC6.2|PP349_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein MRL1,
chloroplastic; AltName: Full=Protein MATURATION OF RBCL
1; Short=AtMRL1; Flags: Precursor
gi|332661026|gb|AEE86426.1| pentatricopeptide repeat
protein MRL1 [Arabidopsis thaliana]
Length = 1089
Score = 168 bits (426), Expect = 6e-40
Identities = 79/172 (45%), Positives = 120/172 (69%)
Frame = -3
Query: 521 AKREGIRPGNIIYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGK 342
AK +GIR G I YSSLMGAC N K+W+KA+ELYE++K + PT+ST+NALIT+ C+ +
Sbjct: 705 AKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQ 764
Query: 341 LQESITILEEMKQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNC 162
L +++ L+E+K + PN ITY++L++A ER+D+ +++ KL S+A DGV+P+L++C C
Sbjct: 765 LPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRC 824
Query: 161 VIGLCLRRYQHDSVLSATIQRDETRNMQIHNQWTSQALLTYRQAISLGVKPT 6
+ LC RR++ + ++ QI N+WTS AL+ YR+ IS G PT
Sbjct: 825 ITSLCKRRFEKACAGGEPVVSFKSGRPQIENKWTSMALMVYRETISGGTVPT 876
Score = 55.5 bits (132), Expect = 7e-06
Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Frame = -3
Query: 509 GIRPGNIIYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGKLQES 330
GIR +Y+ + +C + +W+ A +Y+++K + P +ALI A L E+
Sbjct: 639 GIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEA 698
Query: 329 ITILEEMKQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNCVI-G 153
IL++ K + + I+Y+ L+ AC + K A++L+ + S + P++ N +I
Sbjct: 699 FGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITA 758
Query: 152 LC 147
LC
Sbjct: 759 LC 760
>dbj|BAE98839.1| hypothetical protein [Arabidopsis thaliana]
Length = 1089
Score = 168 bits (426), Expect = 6e-40
Identities = 79/172 (45%), Positives = 120/172 (69%)
Frame = -3
Query: 521 AKREGIRPGNIIYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGK 342
AK +GIR G I YSSLMGAC N K+W+KA+ELYE++K + PT+ST+NALIT+ C+ +
Sbjct: 705 AKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQ 764
Query: 341 LQESITILEEMKQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNC 162
L +++ L+E+K + PN ITY++L++A ER+D+ +++ KL S+A DGV+P+L++C C
Sbjct: 765 LPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRC 824
Query: 161 VIGLCLRRYQHDSVLSATIQRDETRNMQIHNQWTSQALLTYRQAISLGVKPT 6
+ LC RR++ + ++ QI N+WTS AL+ YR+ IS G PT
Sbjct: 825 ITSLCKRRFEKACAGGEPVVSFKSGRPQIENKWTSMALMVYRETISGGTVPT 876
Score = 55.5 bits (132), Expect = 7e-06
Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Frame = -3
Query: 509 GIRPGNIIYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGKLQES 330
GIR +Y+ + +C + +W+ A +Y+++K + P +ALI A L E+
Sbjct: 639 GIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEA 698
Query: 329 ITILEEMKQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNCVI-G 153
IL++ K + + I+Y+ L+ AC + K A++L+ + S + P++ N +I
Sbjct: 699 FGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITA 758
Query: 152 LC 147
LC
Sbjct: 759 LC 760
>dbj|BAF02081.1| hypothetical protein [Arabidopsis thaliana]
Length = 1089
Score = 168 bits (426), Expect = 6e-40
Identities = 79/172 (45%), Positives = 120/172 (69%)
Frame = -3
Query: 521 AKREGIRPGNIIYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGK 342
AK +GIR G I YSSLMGAC N K+W+KA+ELYE++K + PT+ST+NALIT+ C+ +
Sbjct: 705 AKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQ 764
Query: 341 LQESITILEEMKQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNC 162
L +++ L+E+K + PN ITY++L++A ER+D+ +++ KL S+A DGV+P+L++C C
Sbjct: 765 LPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRC 824
Query: 161 VIGLCLRRYQHDSVLSATIQRDETRNMQIHNQWTSQALLTYRQAISLGVKPT 6
+ LC RR++ + ++ QI N+WTS AL+ YR+ IS G PT
Sbjct: 825 ITSLCKRRFEKACAGGEPVVSFKSGRPQIENKWTSMALMVYRETISGGTVPT 876
Score = 55.5 bits (132), Expect = 7e-06
Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Frame = -3
Query: 509 GIRPGNIIYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGKLQES 330
GIR +Y+ + +C + +W+ A +Y+++K + P +ALI A L E+
Sbjct: 639 GIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEA 698
Query: 329 ITILEEMKQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNCVI-G 153
IL++ K + + I+Y+ L+ AC + K A++L+ + S + P++ N +I
Sbjct: 699 FGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITA 758
Query: 152 LC 147
LC
Sbjct: 759 LC 760
>gb|EOX97788.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 1110
Score = 167 bits (424), Expect = 1e-39
Identities = 79/172 (45%), Positives = 116/172 (67%)
Frame = -3
Query: 521 AKREGIRPGNIIYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGK 342
AK +GI G + YSSLMGAC N +NW+KA+ELYE +K + TVST+NALITS C+A +
Sbjct: 725 AKNQGINVGIVSYSSLMGACSNARNWQKALELYENIKAVKLNLTVSTVNALITSLCEADQ 784
Query: 341 LQESITILEEMKQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNC 162
L +++ IL EM++ + PN +TY+ILL+A ER+D+ ++ + L S+A DGV P+L++ C
Sbjct: 785 LPKAMEILSEMEELGLCPNTVTYSILLVASERKDDLEVGLMLLSQARKDGVAPNLIMARC 844
Query: 161 VIGLCLRRYQHDSVLSATIQRDETRNMQIHNQWTSQALLTYRQAISLGVKPT 6
+IG+CLRR++ + + + I N+WTS AL YR+ I G PT
Sbjct: 845 IIGMCLRRFEKACKVGEPVLSFNSGQPHIENKWTSVALAVYRETIVAGTAPT 896
>ref|XP_002534048.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223525928|gb|EEF28334.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1129
Score = 167 bits (424), Expect = 1e-39
Identities = 81/172 (47%), Positives = 118/172 (68%)
Frame = -3
Query: 521 AKREGIRPGNIIYSSLMGACRNTKNWEKAMELYEELKGAGIIPTVSTINALITSFCDAGK 342
A+ +G + G + YSSLMGAC N KNW+KA+ELYE++K + PTVST+NAL+T+ CD +
Sbjct: 744 ARTQGTQLGIVPYSSLMGACSNAKNWQKALELYEDIKAIKLKPTVSTMNALMTALCDGDQ 803
Query: 341 LQESITILEEMKQKTVLPNNITYTILLMACEREDEPKLAIKLFSRALSDGVTPSLVICNC 162
LQ+++ L EMK + PN +TY+ILL+A ER+D+ L S+A D +TP+ ++ C
Sbjct: 804 LQKALETLSEMKSFGLCPNIVTYSILLVASERKDDLDAGDMLLSQAKEDCITPTFLMYKC 863
Query: 161 VIGLCLRRYQHDSVLSATIQRDETRNMQIHNQWTSQALLTYRQAISLGVKPT 6
+IG+CLRRY+ L +I ++ QI N+WTS+AL YR+ I+ G KPT
Sbjct: 864 IIGMCLRRYKKACSLGESILSFDSGRPQIKNEWTSRALTVYRETIAAGEKPT 915