BLASTX nr result
ID: Ephedra25_contig00017488
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00017488
(607 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ25313.1| hypothetical protein PRUPE_ppa015679mg [Prunus pe... 110 3e-22
ref|XP_006857341.1| hypothetical protein AMTR_s00067p00095130 [A... 105 1e-20
ref|XP_004297831.1| PREDICTED: uncharacterized protein LOC101296... 105 1e-20
ref|XP_002314482.2| hypothetical protein POPTR_0010s08070g [Popu... 96 1e-17
ref|XP_004247930.1| PREDICTED: uncharacterized protein LOC101262... 85 2e-14
ref|XP_006354470.1| PREDICTED: dentin sialophosphoprotein-like [... 81 2e-13
ref|XP_001778539.1| predicted protein [Physcomitrella patens] gi... 80 3e-13
ref|XP_002991376.1| hypothetical protein SELMODRAFT_429718 [Sela... 80 4e-13
ref|XP_002883427.1| nucleic acid binding protein [Arabidopsis ly... 80 4e-13
ref|XP_002988242.1| hypothetical protein SELMODRAFT_447288 [Sela... 80 6e-13
ref|XP_006406035.1| hypothetical protein EUTSA_v10020149mg [Eutr... 77 4e-12
ref|XP_006297030.1| hypothetical protein CARUB_v10013033mg [Caps... 76 8e-12
ref|NP_188979.2| RNA recognition motif-containing protein [Arabi... 73 7e-11
ref|NP_001118682.1| RNA recognition motif-containing protein [Ar... 70 3e-10
ref|XP_001769584.1| predicted protein [Physcomitrella patens] gi... 70 4e-10
ref|XP_002978664.1| hypothetical protein SELMODRAFT_418465 [Sela... 62 2e-07
ref|XP_002984597.1| hypothetical protein SELMODRAFT_423782 [Sela... 62 2e-07
gb|EOY06088.1| RNA-binding (RRM/RBD/RNP motifs) family protein [... 57 4e-06
>gb|EMJ25313.1| hypothetical protein PRUPE_ppa015679mg [Prunus persica]
Length = 835
Score = 110 bits (275), Expect = 3e-22
Identities = 70/196 (35%), Positives = 112/196 (57%), Gaps = 2/196 (1%)
Frame = +2
Query: 11 NQDRRDNARQIVVMFLKPKAAESDINRVFNDCGKINKIELFQSKLEHIRYSYAVLQFNTE 190
+Q +++V FL + + NDCG+I KI+L S E + A + F T
Sbjct: 525 SQKEGSTESKVLVRFLHKNVKDDAVVNALNDCGEIVKIQLL-SVSEGSNFRDAWVHFKTS 583
Query: 191 EGYQKALLKKNVAICGGDVAVEAVNIDKDFSKPKISENIEQNPLSFSEIKSSRCKVMIRN 370
Q+AL K ++ I +V V A +++ +K I I + L + IK+ VMI++
Sbjct: 584 NESQRALRKTDLIIGNSEVVVVATSLEDVLNKVSIPNVIGDSELPVALIKNPTRTVMIKH 643
Query: 371 FPDTIKLNVLKKALSFCGN-VASIFIDASNSV-IIEFETEVARDKALKAAWISVDGRKVQ 544
I L+ LK AL+FCG+ ++S F+ +S+SV +EFETE A++ A+ A I+V+G+++
Sbjct: 644 LTHDISLHHLKGALAFCGSGISSFFLGSSSSVAFVEFETEDAKETAIAACSINVEGKQLS 703
Query: 545 ISAIDIPRTPVVRIAN 592
I ID+PRT VVRI+N
Sbjct: 704 ILRIDVPRTTVVRISN 719
>ref|XP_006857341.1| hypothetical protein AMTR_s00067p00095130 [Amborella trichopoda]
gi|548861434|gb|ERN18808.1| hypothetical protein
AMTR_s00067p00095130 [Amborella trichopoda]
Length = 773
Score = 105 bits (262), Expect = 1e-20
Identities = 69/191 (36%), Positives = 107/191 (56%), Gaps = 2/191 (1%)
Frame = +2
Query: 41 IVVMFLKPKAAESDINRVFNDCGKINKIELFQSKLEHIRYSYAVLQFNTEEGYQKALLKK 220
+ V FL A + DI + F CG+I ++ + S R++ A + F EG Q+AL K
Sbjct: 470 LFVKFLPKSATDVDIRKAFGGCGEIEELCIIPSLKATARFNNAYVSFLRGEGLQRALEKS 529
Query: 221 NVAICGGDVAVEAVN-IDKDFSKPKISENIEQNPLSFSEIKSSRCKVMIRNFPDTIKLNV 397
N+ I G DV VEA + + K + IS I +++ +M+R P I +
Sbjct: 530 NLVINGADVVVEADSPLLKITNMVSISNLIGDPDAPLPLLENPVRTIMVRGLPVGIGSHQ 589
Query: 398 LKKALSFCGNVASIFIDASNSV-IIEFETEVARDKALKAAWISVDGRKVQISAIDIPRTP 574
L +LS G+++ + +S S+ IEFETE A++KAL A+ IS+ G+++QI ID PRT
Sbjct: 590 LSFSLSNFGSISRFIMGSSLSIGYIEFETEDAKEKALAASTISLSGKQIQILRIDAPRTS 649
Query: 575 VVRIANVSSKT 607
VVRI+N+ +T
Sbjct: 650 VVRISNIGRET 660
>ref|XP_004297831.1| PREDICTED: uncharacterized protein LOC101296092 [Fragaria vesca
subsp. vesca]
Length = 736
Score = 105 bits (262), Expect = 1e-20
Identities = 68/196 (34%), Positives = 111/196 (56%), Gaps = 2/196 (1%)
Frame = +2
Query: 14 QDRRDNARQIVVMFLKPKAAESDINRVFNDCGKINKIELFQSKLEHIRYSYAVLQFNTEE 193
Q + +++V FL ES I + F+DCG I +I+L +E + + F T E
Sbjct: 421 QKKVSTESKVMVRFLHKFVQESSIYKAFDDCGCITRIQLLPL-IEGSIFRAGYVHFKTAE 479
Query: 194 GYQKALLKKNVAICGGDVAVEAVNIDKDFSKPKISENIEQNPLSFSEIKSSRCKVMIRNF 373
G KAL K + G V V+A +++ +K I I + +KS VMI+
Sbjct: 480 GSHKALRKSGIVSEGHTVVVDANSLEDVPNKIAIPNLIGDPEVPLMLVKSPTRTVMIKQL 539
Query: 374 PDTIKLNVLKKALSFCGN-VASIFIDASNSV-IIEFETEVARDKALKAAWISVDGRKVQI 547
I L+ LK+AL+FCG+ ++S+F+ +S+SV +EFETE A+++A+ A I+V +++ I
Sbjct: 540 THDISLHQLKEALAFCGSGISSVFLGSSSSVAYVEFETEDAKERAIAAYSINVQEKQLLI 599
Query: 548 SAIDIPRTPVVRIANV 595
ID+PRT V+R+ +V
Sbjct: 600 LRIDVPRTTVIRMTSV 615
>ref|XP_002314482.2| hypothetical protein POPTR_0010s08070g [Populus trichocarpa]
gi|550329344|gb|EEF00653.2| hypothetical protein
POPTR_0010s08070g [Populus trichocarpa]
Length = 696
Score = 95.5 bits (236), Expect = 1e-17
Identities = 63/192 (32%), Positives = 103/192 (53%), Gaps = 1/192 (0%)
Frame = +2
Query: 26 DNARQIVVMFLKPKAAESDINRVFNDCGKINKIELFQSKLEHIRYSYAVLQFNTEEGYQK 205
D ++++ FL + DI F +CG I+KIE S ++ A L F T +G K
Sbjct: 396 DTENKLLLRFLHKDVGDGDIISCFRNCGPISKIEKVSS-VKGSNLFDAFLHFETRQGLHK 454
Query: 206 ALLKKNVAICGGDVAVEAVNIDKDFSKPKISENIEQNPLSFSEIKSSRCKVMIRNFPDTI 385
AL K V I + + + S P + +I+ +S + +K V I+ D I
Sbjct: 455 ALEKPEVLIKNSNAFIH--DTASRISIPNLIGDID---ISVALVKHPTRTVKIKQLTDDI 509
Query: 386 KLNVLKKALSFCGNVASIFIDASNS-VIIEFETEVARDKALKAAWISVDGRKVQISAIDI 562
+ LK+ALSFC + ++F+ AS+S +EFE+E A+++AL ++ V G+++ I +D
Sbjct: 510 SSHQLKEALSFCRSGINVFLGASSSNAYVEFESEDAKERALAKHFLQVSGKQLSIFRVDA 569
Query: 563 PRTPVVRIANVS 598
PRT VVRI N++
Sbjct: 570 PRTTVVRILNIN 581
>ref|XP_004247930.1| PREDICTED: uncharacterized protein LOC101262563 [Solanum
lycopersicum]
Length = 851
Score = 84.7 bits (208), Expect = 2e-14
Identities = 59/196 (30%), Positives = 103/196 (52%), Gaps = 2/196 (1%)
Frame = +2
Query: 17 DRRDNARQIVVMFLKPKAAESDINRVFNDCGKINKIELFQSKLEHIRYSYAVLQFNTEEG 196
++ + ++ + F+ KA E D+ F CG I K+ +F S ++ Y A + F +++G
Sbjct: 543 EKLSDENKLTIKFVNVKATEDDVRDCFKSCGAITKV-VFPS-VKSTNYKVAHIYFESKKG 600
Query: 197 YQKALLKKNVAICGGDVAVEAVNIDKDFSKPKISENIEQNPLSFSEIKSSRCKVMIRNFP 376
QKAL +V I V VEA K + I + I + S +K VMI+
Sbjct: 601 RQKALEWSDVVI-KNIVVVEATFPPKGRERMCIPDLIGYPEVPTSLVKHPSRTVMIKELK 659
Query: 377 DTIKLNVLKKALSFC-GNVASIFIDASNSVI-IEFETEVARDKALKAAWISVDGRKVQIS 550
+ + +++AL+FC N+ I+ +S+SV +EFET ++ A+ +++ G + I
Sbjct: 660 HNVSFHDIEEALAFCRSNITGIYFGSSSSVAYVEFETVEGKEIAIAKHSLTMLGETLSIL 719
Query: 551 AIDIPRTPVVRIANVS 598
ID PRT +VRI+N++
Sbjct: 720 RIDAPRTTIVRISNIA 735
>ref|XP_006354470.1| PREDICTED: dentin sialophosphoprotein-like [Solanum tuberosum]
Length = 928
Score = 81.3 bits (199), Expect = 2e-13
Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 2/188 (1%)
Frame = +2
Query: 38 QIVVMFLKPKAAESDINRVFNDCGKINKIELFQSKLEHIRYSYAVLQFNTEEGYQKALLK 217
++ + F+ KA E D+ F CG I K+ +F S + Y A + F +++G QKAL K
Sbjct: 627 KMTIKFVNVKATEQDVCDGFKGCGAITKV-VFPSVIS-TNYKVAHIYFESKKGKQKAL-K 683
Query: 218 KNVAICGGDVAVEAVNIDKDFSKPKISENIEQNPLSFSEIKSSRCKVMIRNFPDTIKLNV 397
+ + V VEA K + I + I + S +K VMI+ + +
Sbjct: 684 WSDTVIRNVVVVEATFPPKGRERMCIPDLIGHPEVPTSLVKHPSRTVMIKELKHNVSFHD 743
Query: 398 LKKALSFCG-NVASIFIDASNSVI-IEFETEVARDKALKAAWISVDGRKVQISAIDIPRT 571
+++ L+FCG N+ IF +S+SV +EFET ++ A+ + + G + I ID PRT
Sbjct: 744 IEEVLAFCGSNITGIFFGSSSSVAYVEFETVEGKEIAIAKHSLIMLGETLSILRIDAPRT 803
Query: 572 PVVRIANV 595
+VRI+N+
Sbjct: 804 TIVRISNI 811
>ref|XP_001778539.1| predicted protein [Physcomitrella patens]
gi|162670137|gb|EDQ56712.1| predicted protein
[Physcomitrella patens]
Length = 666
Score = 80.5 bits (197), Expect = 3e-13
Identities = 62/213 (29%), Positives = 105/213 (49%), Gaps = 20/213 (9%)
Frame = +2
Query: 14 QDRRDNARQIVVMFLKPKAAESDINRVFNDCGKINKIELFQSKLEHIRYSYAVLQFNTEE 193
+D +++ + + +L P+A +D+ F+DCG+I + + + + H +Y+Y + F T E
Sbjct: 298 RDEQEDRHGLFLRYLSPQATPADLKEAFSDCGEIIRAQAIKPRT-HQKYTYGFVDFKTAE 356
Query: 194 GYQKALLKKNVAICGGDVAVEAVN--------------IDKDFSKPKISENIEQNPLSFS 331
QKAL K V I G + E + + DF++ ++S+N + L S
Sbjct: 357 ALQKALEKDKVYIKGVRIRKEPSSSTPKIPDRNGNVNPLTVDFAQSRVSDNSPGSFLGPS 416
Query: 332 EIKSSR---CKVMIRNFPDTIKLNVLKKALSFCGNVA-SIFIDASNSVI--IEFETEVAR 493
+ K R V + + P I L +K+ALS G +A S + I +EF+ E AR
Sbjct: 417 KSKGIRRTGYSVAVEDVPLHIPLTEVKEALSKYGEIAHSSRKEGHGGYIANVEFKGEDAR 476
Query: 494 DKALKAAWISVDGRKVQISAIDIPRTPVVRIAN 592
KAL A + ++G I +D +T VVR+ N
Sbjct: 477 KKALSAKSVQLNGMHYSILRVDPIKTSVVRLNN 509
>ref|XP_002991376.1| hypothetical protein SELMODRAFT_429718 [Selaginella moellendorffii]
gi|300140769|gb|EFJ07488.1| hypothetical protein
SELMODRAFT_429718 [Selaginella moellendorffii]
Length = 595
Score = 80.1 bits (196), Expect = 4e-13
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 22/207 (10%)
Frame = +2
Query: 41 IVVMFLKPKAAESDINRVFNDCGKINKIELFQSKLEHIRYSYAVLQFNTEEGYQKALLKK 220
+ + FL P+A ESD+ F CG I++I++ +S+ +Y Y + F TEE A LKK
Sbjct: 270 LYIKFLAPQATESDVKAAFRSCGDIHRIQIVRSRNPGAKYIYGFVDFTTEEALNSA-LKK 328
Query: 221 NVAICGGDVAVEAVNIDKDFSKPKISEN--------IEQNPLSFSEIKS----------S 346
+ I G V E K + E+ +N S + K+
Sbjct: 329 EIIIRGIKVQTETSKNGAPKEKQQKQESDSDDDAAKSNKNKTSLAVTKTMDDLALPPEKR 388
Query: 347 RCKVMIRNFPDTIKLNVLKKALSFCGNVASIFIDASN----SVIIEFETEVARDKALKAA 514
RC + + + P L + AL G V + S+ + +EF++E+ +D AL A+
Sbjct: 389 RCTLALESIPHA-SLPQIIDALGQYGEVVNSQTKHSSGGNTTAYVEFKSEIEKDTALAAS 447
Query: 515 WISVDGRKVQISAIDIPRTPVVRIANV 595
+ + G+ ++++ +DIP T VVR++N+
Sbjct: 448 KVILGGKSLKLTRVDIPLTTVVRLSNI 474
>ref|XP_002883427.1| nucleic acid binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329267|gb|EFH59686.1| nucleic acid binding protein
[Arabidopsis lyrata subsp. lyrata]
Length = 785
Score = 80.1 bits (196), Expect = 4e-13
Identities = 58/189 (30%), Positives = 92/189 (48%), Gaps = 2/189 (1%)
Frame = +2
Query: 38 QIVVMFLKPKAAESDINRVFNDCGKINKIELFQSKLEHIRYSYAVLQFNTEEGYQKALLK 217
++++ FL+ + I VF+ G + ++ S E Y A+L F T +KAL K
Sbjct: 485 KVLLRFLQESCQKKHIVEVFSQFGAVLHVQEIPS-FEGCIYKDALLTFETNTAVKKALEK 543
Query: 218 KNVAICGGDVAVEAVNIDKDFSKPKISENIEQNPLSFSEIKSSRCKVMIRNFPDTIKLNV 397
V + + VEA + + + I + I + + +K V I N
Sbjct: 544 GRVTVMNNNAVVEATSQEDMVERICIPDLIGDPDVPVALVKEPSRTVKIHPLTHDFSSNQ 603
Query: 398 LKKALSFCGNVASIFIDASN--SVIIEFETEVARDKALKAAWISVDGRKVQISAIDIPRT 571
+K+AL FC + S FI S+ +EFETE +++AL IS+ ++ IS IDIPRT
Sbjct: 604 IKEALKFCRSNISKFILGSSRTDAFVEFETEDGKERALAEHSISICNTQLFISRIDIPRT 663
Query: 572 PVVRIANVS 598
V RI+N+S
Sbjct: 664 TVARISNLS 672
>ref|XP_002988242.1| hypothetical protein SELMODRAFT_447288 [Selaginella moellendorffii]
gi|300143974|gb|EFJ10661.1| hypothetical protein
SELMODRAFT_447288 [Selaginella moellendorffii]
Length = 595
Score = 79.7 bits (195), Expect = 6e-13
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 22/207 (10%)
Frame = +2
Query: 41 IVVMFLKPKAAESDINRVFNDCGKINKIELFQSKLEHIRYSYAVLQFNTEEGYQKALLKK 220
+ + FL P+A ESD+ F CG I++I++ +S+ +Y Y + F TEE A LKK
Sbjct: 270 LYIKFLAPQATESDVKAAFRSCGDIHRIQIVRSRNPGAKYIYGFVDFTTEEALNSA-LKK 328
Query: 221 NVAICGGDVAVEAVNIDKDFSKPKISEN--------IEQNPLSFSEIKS----------S 346
+ I G V E K + E+ +N S + K+
Sbjct: 329 EIIIRGIKVQTEPSKNGAPKEKQQKQESDSDDDAAKSNKNKTSLAVTKTMDDLALAPEKR 388
Query: 347 RCKVMIRNFPDTIKLNVLKKALSFCGNVASIFIDASN----SVIIEFETEVARDKALKAA 514
RC + + + P L + AL G V + S+ + +EF++E+ +D AL A+
Sbjct: 389 RCTLALESIPHA-SLPQIIDALGQYGEVVNSQTKHSSGGNTTAYVEFKSEIEKDTALAAS 447
Query: 515 WISVDGRKVQISAIDIPRTPVVRIANV 595
+ + G+ ++++ +DIP T VVR++N+
Sbjct: 448 KVILGGKSLKLTRVDIPLTTVVRLSNI 474
>ref|XP_006406035.1| hypothetical protein EUTSA_v10020149mg [Eutrema salsugineum]
gi|557107181|gb|ESQ47488.1| hypothetical protein
EUTSA_v10020149mg [Eutrema salsugineum]
Length = 730
Score = 77.0 bits (188), Expect = 4e-12
Identities = 59/189 (31%), Positives = 95/189 (50%), Gaps = 2/189 (1%)
Frame = +2
Query: 38 QIVVMFLKPKAAESDINRVFNDCGKINKIELFQSKLEHIRYSYAVLQFNTEEGYQKALLK 217
++ + FL P+ + +I + F++ G + + S + Y AVL F T +KAL K
Sbjct: 433 KVCLRFL-PRFDKEEIVKRFSEFGAVLDFQEIPS-FDGCYYKDAVLTFETHSAVKKALKK 490
Query: 218 KNVAICGGDVAVEAVNIDKDFSKPKISENIEQNPLSFSEIKSSRCKVMIRNFPDTIKLNV 397
V + V VEA + + + K I + I + + +K V I I N
Sbjct: 491 AVVMVKNYSVIVEATSQEDNVEKICIPDLIGDPDVPIALLKEPTRTVKIHPLAHGISSNQ 550
Query: 398 LKKALSFCGNVASIFI--DASNSVIIEFETEVARDKALKAAWISVDGRKVQISAIDIPRT 571
+K+AL FC + S FI + + +EFETE +++AL IS+ +++ IS IDIPRT
Sbjct: 551 IKEALRFCRSDISKFILGSSKTAAFVEFETEDGKERALAEHSISIFNKQLFISRIDIPRT 610
Query: 572 PVVRIANVS 598
V RI++ S
Sbjct: 611 TVARISHFS 619
>ref|XP_006297030.1| hypothetical protein CARUB_v10013033mg [Capsella rubella]
gi|482565739|gb|EOA29928.1| hypothetical protein
CARUB_v10013033mg [Capsella rubella]
Length = 764
Score = 75.9 bits (185), Expect = 8e-12
Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 2/189 (1%)
Frame = +2
Query: 38 QIVVMFLKPKAAESDINRVFNDCGKINKIELFQSKLEHIRYSYAVLQFNTEEGYQKALLK 217
++++ FL+ ++DI VF+ G + ++ S LE Y A+L F T+ + AL K
Sbjct: 461 KVLLRFLQESFNKNDIVEVFSGFGTVLDVQEIPS-LEGCIYKDALLTFETKTAVKDALKK 519
Query: 218 KNVAICGGDVAVEAVNIDKDFSKPKISENIEQNPLSFSEIKSSRCKVMIRNFPDTIKLNV 397
+V + V VEA + I + I + + +K I N
Sbjct: 520 VSVMVKNYSVCVEAASQKDMVETICIPDLIGDPDVPIALVKEPARTAKIHPMTHDFSSNQ 579
Query: 398 LKKALSFCGNVASIFI--DASNSVIIEFETEVARDKALKAAWISVDGRKVQISAIDIPRT 571
+K+AL FC + S FI A +EFETE +++AL +S+ ++ IS IDIPRT
Sbjct: 580 IKEALRFCRSNISKFILGSAGTDAFVEFETEDGKERALAGHSVSICNTQLFISRIDIPRT 639
Query: 572 PVVRIANVS 598
V R +N S
Sbjct: 640 TVARFSNFS 648
>ref|NP_188979.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|11994322|dbj|BAB02281.1| unnamed protein product
[Arabidopsis thaliana] gi|332643236|gb|AEE76757.1| RNA
recognition motif-containing protein [Arabidopsis
thaliana]
Length = 811
Score = 72.8 bits (177), Expect = 7e-11
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 3/190 (1%)
Frame = +2
Query: 38 QIVVMFLKPKAAESDINRVFND-CGKINKIELFQSKLEHIRYSYAVLQFNTEEGYQKALL 214
++++ FL + + I + F+ G + ++ S +E Y A+L F T +KAL
Sbjct: 510 KVLLRFLPESSMKKHIVKAFSSQFGAVLHVQEIPS-IEGCIYKDALLTFETNTAVKKALK 568
Query: 215 KKNVAICGGDVAVEAVNIDKDFSKPKISENIEQNPLSFSEIKSSRCKVMIRNFPDTIKLN 394
K +V + + VEA + + + I + I + + +K V I N
Sbjct: 569 KGHVTVMNYNTVVEATSQEDMVERICIPDLIGDPDVPVALVKEPARTVKIHPLTHDFSSN 628
Query: 395 VLKKALSFC-GNVASIFIDASNS-VIIEFETEVARDKALKAAWISVDGRKVQISAIDIPR 568
+K+AL FC N++ + +S + +EFETE +++AL IS+ ++ IS IDIPR
Sbjct: 629 QIKEALKFCRSNISKFTLGSSRTDAFVEFETEDGKERALAEHSISICNTQLFISRIDIPR 688
Query: 569 TPVVRIANVS 598
T V RI+N+S
Sbjct: 689 TIVARISNLS 698
>ref|NP_001118682.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332643237|gb|AEE76758.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 771
Score = 70.5 bits (171), Expect = 3e-10
Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 2/154 (1%)
Frame = +2
Query: 143 LEHIRYSYAVLQFNTEEGYQKALLKKNVAICGGDVAVEAVNIDKDFSKPKISENIEQNPL 322
+E Y A+L F T +KAL K +V + + VEA + + + I + I +
Sbjct: 505 IEGCIYKDALLTFETNTAVKKALKKGHVTVMNYNTVVEATSQEDMVERICIPDLIGDPDV 564
Query: 323 SFSEIKSSRCKVMIRNFPDTIKLNVLKKALSFC-GNVASIFIDASNS-VIIEFETEVARD 496
+ +K V I N +K+AL FC N++ + +S + +EFETE ++
Sbjct: 565 PVALVKEPARTVKIHPLTHDFSSNQIKEALKFCRSNISKFTLGSSRTDAFVEFETEDGKE 624
Query: 497 KALKAAWISVDGRKVQISAIDIPRTPVVRIANVS 598
+AL IS+ ++ IS IDIPRT V RI+N+S
Sbjct: 625 RALAEHSISICNTQLFISRIDIPRTIVARISNLS 658
>ref|XP_001769584.1| predicted protein [Physcomitrella patens]
gi|162679126|gb|EDQ65577.1| predicted protein
[Physcomitrella patens]
Length = 593
Score = 70.1 bits (170), Expect = 4e-10
Identities = 58/216 (26%), Positives = 93/216 (43%), Gaps = 26/216 (12%)
Frame = +2
Query: 26 DNARQIVVMFLKPKAAESDINRVFNDCGKINKIELFQSKLEHIRYSYAVLQFNTEEGYQK 205
D I V +L +A D+ F DCG I + +++ +++Y+Y + F T E QK
Sbjct: 250 DERHGIFVRYLSCRATPKDLREAFADCGDIVRAYAIRAR-PNVKYTYGFVDFKTAEALQK 308
Query: 206 ALLKKNVAICGGDVAVE--------AVNIDKDFSKPKISENIEQNPLSFSE--------- 334
AL K V I G V E N D S+ + +E +E
Sbjct: 309 ALAKTRVYIRGSRVTTEPSTTTPHHLSNKSWDDSQNSSAGGVESTTSQGTEKVTGTYVDA 368
Query: 335 -----IKSSRCKVMIRNFPDTIKLNVLKKALSFCGNVASIFIDASN----SVIIEFETEV 487
I+ S KV + P + L+ ++ ALS G + + N S +EF+
Sbjct: 369 PNVKAIRGSGYKVAVMGIPMNVPLSEVQSALSKYGEIVLSDMKQENIGTYSANLEFKAVD 428
Query: 488 ARDKALKAAWISVDGRKVQISAIDIPRTPVVRIANV 595
+RD AL A + ++G + I ++ T VVR++NV
Sbjct: 429 SRDDALSAKSVQLNGSQYPIFRVNPVNTSVVRLSNV 464
>ref|XP_002978664.1| hypothetical protein SELMODRAFT_418465 [Selaginella moellendorffii]
gi|300153473|gb|EFJ20111.1| hypothetical protein
SELMODRAFT_418465 [Selaginella moellendorffii]
Length = 766
Score = 61.6 bits (148), Expect = 2e-07
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Frame = +2
Query: 317 PLSFSEIKSSRCKVMIRNFPDTIKLNVLKKALSFCGNVASIFIDA----SNSVIIEFETE 484
PL + V + N P T + L+ AL+ G + + ++ S++ + E+ T+
Sbjct: 539 PLGDPQKMRKDLSVCVENLPPTTNVTQLRDALAIHGEIYATYLKHRDMNSSTYVFEYLTD 598
Query: 485 VARDKALKAAWISVDGRKVQISAIDIPRTPVVRIANVSSKT 607
++ AL A W+ ++G+ V+IS D+P+T VVR++N+S T
Sbjct: 599 EGKESALSAHWVHINGQLVRISRADVPKTTVVRVSNISPST 639
Score = 55.8 bits (133), Expect = 9e-06
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +2
Query: 47 VMFLKPKAAESDINRVFNDCGKINKIELFQSKLEHIRYSYAVLQFNTEEGYQKALLKKNV 226
V FL P A E D+ + F DCG+I ++ + +++Y + F T +G A L+KNV
Sbjct: 302 VRFLNPAATEEDLKQAFGDCGEITRVSAVKPMKPTAKFTYGFIDFKTADGLSNA-LRKNV 360
Query: 227 AICGGDVAVEAV---NIDKDFSKPKISE 301
I G V EA N PKI E
Sbjct: 361 VILGNKVETEAAPTQNTQLSDVAPKIKE 388
>ref|XP_002984597.1| hypothetical protein SELMODRAFT_423782 [Selaginella moellendorffii]
gi|300147579|gb|EFJ14242.1| hypothetical protein
SELMODRAFT_423782 [Selaginella moellendorffii]
Length = 758
Score = 61.6 bits (148), Expect = 2e-07
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Frame = +2
Query: 317 PLSFSEIKSSRCKVMIRNFPDTIKLNVLKKALSFCGNVASIFIDA----SNSVIIEFETE 484
PL + V + N P T + L+ AL+ G + + ++ S++ + E+ T+
Sbjct: 539 PLGDPQKMRKDLSVCVENLPPTTNVTQLRDALAIHGEIYATYLKHRDMNSSTYVFEYLTD 598
Query: 485 VARDKALKAAWISVDGRKVQISAIDIPRTPVVRIANVSSKT 607
++ AL A W+ ++G+ V+IS D+P+T VVR++N+S T
Sbjct: 599 EGKESALSAHWVHINGQLVRISRADVPKTTVVRVSNISPST 639
Score = 56.2 bits (134), Expect = 7e-06
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +2
Query: 47 VMFLKPKAAESDINRVFNDCGKINKIELFQSKLEHIRYSYAVLQFNTEEGYQKALLKKNV 226
V FL P A E D+ + F DCG+I+++ + +++Y + F T +G A L+KNV
Sbjct: 302 VRFLNPAATEEDLKQAFGDCGEISRVSAVKPMKPTAKFTYGFIDFKTADGLSNA-LRKNV 360
Query: 227 AICGGDVAVEAV---NIDKDFSKPKISE 301
I G V EA N PKI E
Sbjct: 361 VILGNKVETEAAPTQNTQLSDVAPKIKE 388
>gb|EOY06088.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Theobroma cacao]
Length = 245
Score = 57.0 bits (136), Expect = 4e-06
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Frame = +2
Query: 53 FLKPKAAESDINRVFNDCGKINKIELFQSKLEHIRYSYAVLQFNTEEGYQKALLKKNVAI 232
FL + I F DC I +E S + + V+ F T EGYQ L K ++ +
Sbjct: 78 FLTQNIEKHSILAAFCDCWPIVNVEEV-SLTKQSMFKDFVVHFETREGYQNTLKKTDLMV 136
Query: 233 CGGDVAVEAVNIDKDFSKPKISENIEQNPLSFSEIKSSRCKVMIRNFPDTIKLNVLKKAL 412
+ VEA + + I + I + +K+ V ++ + I LK+AL
Sbjct: 137 LNAEAFVEASSSEDMDDAISIPDLIGDPDAPVALVKNPTKTVKVKQLSEDISSQQLKEAL 196
Query: 413 SFC-GNVASIFIDASNSVI-IEFETEVARD 496
+FC ++S ++ +++SV+ +EFETE A++
Sbjct: 197 AFCQSGISSFYLGSTSSVLYVEFETEDAKE 226