BLASTX nr result

ID: Ephedra25_contig00017449 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00017449
         (642 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE77021.1| unknown [Picea sitchensis]                             132   9e-29
ref|XP_006859207.1| hypothetical protein AMTR_s00070p00188780 [A...    60   5e-07

>gb|ADE77021.1| unknown [Picea sitchensis]
          Length = 305

 Score =  132 bits (332), Expect = 9e-29
 Identities = 90/241 (37%), Positives = 128/241 (53%), Gaps = 28/241 (11%)
 Frame = -1

Query: 642 KTETXXXXXXXXXXXQVNSSWMMMDPSVMMGATSFPYQISVPR-THMPSSNNQNSLGPSE 466
           K+ET           ++ SSWMMMDP+V+M A SFPY ++VP+ T +PSSN Q  +  ++
Sbjct: 66  KSETDQLQDQFQQHIRIISSWMMMDPAVIMSAASFPYSLAVPQATPVPSSNCQQPVMSNQ 125

Query: 465 LQTSL-AMPPFVPIATIGGFPVHPRLHTYGAFANT---------QLPQFCNPFSNNSHVE 316
           LQ  L A PP+VP+ATIG FP+HP LHTY AF N+         Q P +    + + HVE
Sbjct: 126 LQRPLVAPPPYVPLATIGAFPLHPGLHTYAAFGNSHADGSSPYLQFPNYGPSLNGHCHVE 185

Query: 315 RPYAQYPMPLHPMHSYAAEVLPQHGSELPTAYAQ------KIEAKKQSIASLENQSQPGF 154
           R  +Q    LHPM  + +++  Q G + P + +       K  A   S A+++ Q +   
Sbjct: 186 RHSSQ----LHPMPPFLSQMQCQQGCQAPVSSSGPSVEICKSCASVASTAAVKTQDKSSH 241

Query: 153 ACSSNVELSAGGKISISASQVHTSVVE-----------DSDEVGNDKHPENLLSDLSSIS 7
             S N++   GGK + S S V  +VVE            S+ + ND + E L S  SSIS
Sbjct: 242 VSSQNMDDEGGGKYASSPSPVDDAVVEHRDFCRIEVSCGSETLPNDMNKELLSSFSSSIS 301

Query: 6   E 4
           E
Sbjct: 302 E 302


>ref|XP_006859207.1| hypothetical protein AMTR_s00070p00188780 [Amborella trichopoda]
           gi|548863320|gb|ERN20674.1| hypothetical protein
           AMTR_s00070p00188780 [Amborella trichopoda]
          Length = 401

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 9/120 (7%)
 Frame = -1

Query: 582 WMMMDPSVMMGATSFPYQISVPRTHMPSSNNQNSLGPSELQTSLAMPPFVPIATIGGFPV 403
           W  MDP+V MG T  PY   +P    P S       P++     +M PF+P+      P 
Sbjct: 153 WAPMDPTVAMGPT--PYPFPMPTLATPDSQRT----PTQGHAQASMTPFMPV------PF 200

Query: 402 HPRLHTYGAFANTQ---------LPQFCNPFSNNSHVERPYAQYPMPLHPMHSYAAEVLP 250
           HP +  +  F +           L  + +  + +SHVERP AQYP P+ P+  +  ++ P
Sbjct: 201 HPSIQPFPFFRSVDPSGNNQYLSLTPYASTVNVHSHVERPSAQYPSPVPPLPGFVLQLQP 260


Top