BLASTX nr result
ID: Ephedra25_contig00017343
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00017343
(1188 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADE77823.1| unknown [Picea sitchensis] 144 7e-32
ref|XP_006855287.1| hypothetical protein AMTR_s00057p00039750 [A... 71 8e-10
ref|XP_006305996.1| hypothetical protein CARUB_v10011276mg [Caps... 62 5e-07
ref|NP_173244.1| cyclin-dependent kinase D1;3 [Arabidopsis thali... 61 1e-06
ref|XP_002892978.1| cyclin-dependent kinase D1_3 [Arabidopsis ly... 60 1e-06
ref|XP_002974417.1| hypothetical protein SELMODRAFT_100958 [Sela... 58 7e-06
gb|AFW82157.1| putative cyclin-dependent kinase family protein [... 58 9e-06
ref|NP_001140701.1| uncharacterized protein LOC100272776 [Zea ma... 58 9e-06
>gb|ADE77823.1| unknown [Picea sitchensis]
Length = 480
Score = 144 bits (363), Expect = 7e-32
Identities = 76/128 (59%), Positives = 89/128 (69%), Gaps = 10/128 (7%)
Frame = +1
Query: 136 EQRISAQAALEHRYFSSMPTPTRPDFLPKPS-----NTGQFTQLTKMSPLIVMPPSKARR 300
+ RISAQ ALEHRYFSS+P PTRPD LPKPS N + QL +V+ PSKARR
Sbjct: 330 KNRISAQQALEHRYFSSVPAPTRPDLLPKPSRVDSANPSRPPQLASPGGPVVLSPSKARR 389
Query: 301 IMLFPST-----SKQILDSIKSGSTIEFDMPPEKLNELYPSRGRITESGKKHLKRKTMDV 465
+MLFP+ SKQ+ S G+ IEFDMP KL E+YP R RITESGKKHLKRKTMD+
Sbjct: 390 VMLFPNNLAGILSKQVSQSASGGTPIEFDMPTHKLREVYPPRSRITESGKKHLKRKTMDM 449
Query: 466 ANLLEECA 489
+ L+ECA
Sbjct: 450 SAALDECA 457
>ref|XP_006855287.1| hypothetical protein AMTR_s00057p00039750 [Amborella trichopoda]
gi|548859053|gb|ERN16754.1| hypothetical protein
AMTR_s00057p00039750 [Amborella trichopoda]
Length = 427
Score = 71.2 bits (173), Expect = 8e-10
Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 26/132 (19%)
Frame = +1
Query: 136 EQRISAQAALEHRYFSSMPTPTRPDFLPKPSNTGQFTQ--------LTKMSPLIVMPPSK 291
+ RI+ Q ALEHRYFSS+P PT P LP+P+ G+ +++ P+++ PP K
Sbjct: 284 KNRITVQQALEHRYFSSVPAPTNPVLLPRPAAKGEAVNNIPRPPDLISQEGPVVLSPPRK 343
Query: 292 ARRIMLFPSTS------------KQILDSIKSGSTIEFDMPPEKLN------ELYPSRGR 417
ARR+MLFP + + GST + P ++ P R
Sbjct: 344 ARRVMLFPGSEGNAYEDGTLLKHSAVTSGNTGGSTTQSKYMPMSVDVDALFGSKPPPRPT 403
Query: 418 ITESGKKHLKRK 453
I+ + + HLKRK
Sbjct: 404 ISSTDRSHLKRK 415
>ref|XP_006305996.1| hypothetical protein CARUB_v10011276mg [Capsella rubella]
gi|482574707|gb|EOA38894.1| hypothetical protein
CARUB_v10011276mg [Capsella rubella]
Length = 393
Score = 62.0 bits (149), Expect = 5e-07
Identities = 46/115 (40%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Frame = +1
Query: 142 RISAQAALEHRYFSSMPTPTRPDFLPKP-------SNTGQFTQLTKMSPLIVMPPSKARR 300
RIS + ALEHRYF+S P PT P LPKP S+ G+ +T +S PP K RR
Sbjct: 282 RISVKQALEHRYFTSAPAPTDPAKLPKPVRKQDGTSSDGKHEAITVLS-----PPRKFRR 336
Query: 301 IMLFPSTSKQILDSIKSGSTIEFDMPPEK----LNELYPSRGRITESGKKHLKRK 453
+M P + +DS+KS + P L E P+R IT + + HLKRK
Sbjct: 337 VM--PERGR--VDSLKSHVDKDQQAPMSLDFTILAERPPNRPTITSADRSHLKRK 387
>ref|NP_173244.1| cyclin-dependent kinase D1;3 [Arabidopsis thaliana]
gi|75335217|sp|Q9LMT0.1|CDKD3_ARATH RecName:
Full=Cyclin-dependent kinase D-3; Short=CDKD;3; AltName:
Full=CDK-activating kinase 2-At; Short=CAK2-At
gi|9719719|gb|AAF97821.1|AC034107_4 Strong similarity to
cdc2+/CDC28-related protein kinase from Oryza sativa
gb|X58194 and contains a eukaryotic protein kinase
PF|00069 domain. ESTs gb|T43700, gb|AA395355,
gb|AV548710, gb|AV539020, gb|AV559571 come from this
gene [Arabidopsis thaliana] gi|15147865|dbj|BAB62843.1|
CDK-activating kinase 2 [Arabidopsis thaliana]
gi|20466422|gb|AAM20528.1| putative cdc2+/CDC28-related
protein kinase [Arabidopsis thaliana]
gi|22136358|gb|AAM91257.1| putative cdc2+/CDC28-related
protein kinase [Arabidopsis thaliana]
gi|332191546|gb|AEE29667.1| cyclin-dependent kinase D1;3
[Arabidopsis thaliana]
Length = 391
Score = 60.8 bits (146), Expect = 1e-06
Identities = 46/115 (40%), Positives = 59/115 (51%), Gaps = 11/115 (9%)
Frame = +1
Query: 142 RISAQAALEHRYFSSMPTPTRPDFLPKP-------SNTGQFTQLTKMSPLIVMPPSKARR 300
RIS + ALEHRYF+S P PT P LPKP S+ G+ +T S PP K RR
Sbjct: 280 RISIKQALEHRYFTSAPAPTDPAKLPKPVPKQDGKSSYGKHEAITVQS-----PPRKLRR 334
Query: 301 IMLFPSTSKQILDSIKSGSTIEFDMPPEK----LNELYPSRGRITESGKKHLKRK 453
+M P + +DS+KS + P L E P+R IT + + HLKRK
Sbjct: 335 VM--PERGR--VDSLKSHVDKDQQAPMSLDFTILAERPPNRPTITSADRSHLKRK 385
>ref|XP_002892978.1| cyclin-dependent kinase D1_3 [Arabidopsis lyrata subsp. lyrata]
gi|297338820|gb|EFH69237.1| cyclin-dependent kinase D1_3
[Arabidopsis lyrata subsp. lyrata]
Length = 393
Score = 60.5 bits (145), Expect = 1e-06
Identities = 45/115 (39%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Frame = +1
Query: 142 RISAQAALEHRYFSSMPTPTRPDFLPKP-------SNTGQFTQLTKMSPLIVMPPSKARR 300
RIS + ALEHRYF+S P PT P LPKP S+ G+ +T +S PP K RR
Sbjct: 282 RISIKQALEHRYFTSAPAPTDPAKLPKPVHKQDGKSSYGKHEAITVLS-----PPRKLRR 336
Query: 301 IMLFPSTSKQILDSIKSGSTIEFDMPPEK----LNELYPSRGRITESGKKHLKRK 453
+M P + +DS+K+ + P L E P+R IT + + HLKRK
Sbjct: 337 VM--PERGR--VDSLKAHVDKDQQAPMSLDFTILAERPPNRPTITSADRSHLKRK 387
>ref|XP_002974417.1| hypothetical protein SELMODRAFT_100958 [Selaginella moellendorffii]
gi|302808043|ref|XP_002985716.1| hypothetical protein
SELMODRAFT_122588 [Selaginella moellendorffii]
gi|300146625|gb|EFJ13294.1| hypothetical protein
SELMODRAFT_122588 [Selaginella moellendorffii]
gi|300158015|gb|EFJ24639.1| hypothetical protein
SELMODRAFT_100958 [Selaginella moellendorffii]
Length = 400
Score = 58.2 bits (139), Expect = 7e-06
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Frame = +1
Query: 127 FSLEQRISAQAALEHRYFSSMPTPTRPDFLPKPSNTGQFTQ-----LTKMSPLIVMPPSK 291
F + RI+AQ ALEHRYFS+ P PT+ L +P++ + + + P+++ PP+K
Sbjct: 276 FDPKARITAQQALEHRYFSTDPAPTKAHLLLRPASKAEGMRPPPELASPKEPVVLSPPAK 335
Query: 292 ARRIMLFPSTS 324
ARRI LFP +
Sbjct: 336 ARRISLFPGVA 346
>gb|AFW82157.1| putative cyclin-dependent kinase family protein [Zea mays]
Length = 408
Score = 57.8 bits (138), Expect = 9e-06
Identities = 30/60 (50%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Frame = +1
Query: 142 RISAQAALEHRYFSSMPTPTRPDFLPKPSNTG-----QFTQLT-KMSPLIVMPPSKARRI 303
RISAQ ALEHRYFSS+P PTRP LP+P G + L + P+++ PP K RR+
Sbjct: 292 RISAQQALEHRYFSSLPAPTRPSQLPRPRRKGDQGNNKIPDLNLQDGPMVLSPPRKLRRV 351
>ref|NP_001140701.1| uncharacterized protein LOC100272776 [Zea mays]
gi|194700630|gb|ACF84399.1| unknown [Zea mays]
gi|195640128|gb|ACG39532.1| CDC2+/CDC28-related protein
kinase R2 [Zea mays] gi|413949507|gb|AFW82156.1|
putative cyclin-dependent kinase family protein [Zea
mays]
Length = 428
Score = 57.8 bits (138), Expect = 9e-06
Identities = 30/60 (50%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Frame = +1
Query: 142 RISAQAALEHRYFSSMPTPTRPDFLPKPSNTG-----QFTQLT-KMSPLIVMPPSKARRI 303
RISAQ ALEHRYFSS+P PTRP LP+P G + L + P+++ PP K RR+
Sbjct: 292 RISAQQALEHRYFSSLPAPTRPSQLPRPRRKGDQGNNKIPDLNLQDGPMVLSPPRKLRRV 351