BLASTX nr result

ID: Ephedra25_contig00017328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00017328
         (615 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39910.1| unknown [Picea sitchensis]                             167   2e-39

>gb|ACN39910.1| unknown [Picea sitchensis]
          Length = 1022

 Score =  167 bits (424), Expect = 2e-39
 Identities = 81/203 (39%), Positives = 130/203 (64%)
 Frame = -2

Query: 611  RKTWRAWESNVEDHVKNLINAVDDISRASDHINKCNESLNLAMREXXXXXXXXXXXLRNQ 432
            +KTWR WESN++DHVK LIN +DDISR++ +I +CN++LNLA+ E           L + 
Sbjct: 511  KKTWRTWESNIDDHVKKLINIIDDISRSASYIQQCNQALNLAIAELSISLKVASSILTDP 570

Query: 431  SINANVGSAISKNKSISNTEPLLSCTVDMSSFHATISSMKNLVFGELLDTSGLSHIEEIV 252
            + +  +  +   +  +SNT     C++ ++ F   + S + L F +   +S ++ +E ++
Sbjct: 571  NRDRLLRPSPPNSTCVSNTRLSTRCSIKVTPFPVMLVSSRTLAFEDFPRSSEINSVENLL 630

Query: 251  RNQIGIPARMTITLSNRTPFSLSSHWTLVLEIYRSGGEKIKVSSFNILINNGLGLSSYAQ 72
            + QI +PAR+++TL N T +SLSSHWTLVLE++ +G      ++++ +INNG GL+  AQ
Sbjct: 631  QTQICLPARISVTLYNCTSYSLSSHWTLVLELHNTGVTNGTTTTYSSIINNGFGLARDAQ 690

Query: 71   CIIDCDVKLPCLHRGSLDAYIYL 3
            CII+ DVKLP LH G +  + YL
Sbjct: 691  CIIEWDVKLPSLHAGPVSVFTYL 713


Top