BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00017296
         (576 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX19935.1| coat protein [Nandina mosaic virus]                    346   2e-93
dbj|BAG12127.1| coat protein [Plantago asiatica mosaic virus] gi...   343   2e-92
dbj|BAG12157.1| coat protein [Plantago asiatica mosaic virus]         340   2e-91
dbj|BAG12142.1| coat protein [Plantago asiatica mosaic virus]         340   2e-91
gb|AGW45385.1| coat protein [Plantago asiatica mosaic virus]          335   4e-90
ref|NP_620840.1| capsid protein [Plantago asiatica mosaic virus]...   335   4e-90
ref|NP_702992.1| coat protein [Tulip virus X] gi|23491558|dbj|BA...   300   2e-79
gb|ACE62921.1| coat protein [Tulip virus X]                           299   4e-79
gb|AAW30636.1| coat protein [Tulip virus X]                           235   5e-60
ref|NP_042699.1| coat protein [Cassava common mosaic virus] gi|7...   202   4e-50
ref|YP_224088.1| coat protein [Hydrangea ringspot virus] gi|5679...   178   8e-43
gb|ADE10206.1| coat protein [Hydrangea ringspot virus]                176   3e-42
dbj|BAA00373.1| 28.1K protein [Clover yellow mosaic virus]            159   5e-37
ref|NP_077083.1| coat protein [Clover yellow mosaic virus] gi|11...   159   5e-37
ref|YP_054406.1| coat protein [Zygocactus virus X] gi|38146351|g...   158   1e-36
ref|YP_004849318.1| coat protein [Tamus red mosaic virus] gi|345...   157   2e-36
ref|YP_002647031.1| coat protein [Allium virus X] gi|224579239|g...   155   9e-36
gb|AFU63340.1| coat protein [Alternanthera mosaic virus]              152   8e-35
gb|AAO85393.1| capsid protein [Cactus virus X]                        150   2e-34
gb|AFB81318.1| coat protein [Alternanthera mosaic virus]              150   2e-34

>gb|AAX19935.1| coat protein [Nandina mosaic virus]
          Length = 207

 Score =  346 bits (888), Expect = 2e-93
 Identities = 172/186 (92%), Positives = 179/186 (96%)
 Frame = -2

Query: 560 MALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 381
           MAL  APT DALAAMTFQVSSPSVPTA EL TI++GLTT+G+P DGLLSHALAVVNACFD
Sbjct: 1   MALTAAPTTDALAAMTFQVSSPSVPTASELNTITQGLTTIGVPTDGLLSHALAVVNACFD 60

Query: 380 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFAR 201
           AGSS FVTLSGPSPTATISLAQ+AGVIKVTTTLRKFCR+YAK+IWNARLARNLPPAGFAR
Sbjct: 61  AGSSTFVTLSGPSPTATISLAQIAGVIKVTTTLRKFCRFYAKIIWNARLARNLPPAGFAR 120

Query: 200 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL 21
           ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL
Sbjct: 121 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL 180

Query: 20  ASTSTQ 3
           ASTSTQ
Sbjct: 181 ASTSTQ 186


>dbj|BAG12127.1| coat protein [Plantago asiatica mosaic virus]
           gi|169219481|dbj|BAG12132.1| coat protein [Plantago
           asiatica mosaic virus] gi|169219487|dbj|BAG12137.1| coat
           protein [Plantago asiatica mosaic virus]
           gi|169219499|dbj|BAG12147.1| coat protein [Plantago
           asiatica mosaic virus] gi|169219505|dbj|BAG12152.1| coat
           protein [Plantago asiatica mosaic virus]
          Length = 207

 Score =  343 bits (879), Expect = 2e-92
 Identities = 169/186 (90%), Positives = 182/186 (97%)
 Frame = -2

Query: 560 MALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 381
           MALN+APT+DAL AMTF VSSPSVPTAEEL TI++GLTTLG+PAD LLSHALAVVNACFD
Sbjct: 1   MALNQAPTSDALNAMTFAVSSPSVPTAEELATITQGLTTLGVPADSLLSHALAVVNACFD 60

Query: 380 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFAR 201
           AGSSAFVTLSGPSPTATISLAQ+AGV+KVTTTLRKFCR+YAK+IWNARL+RNLPPAGFAR
Sbjct: 61  AGSSAFVTLSGPSPTATISLAQIAGVVKVTTTLRKFCRFYAKIIWNARLSRNLPPAGFAR 120

Query: 200 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL 21
           ANIKFEHRWAGFDFFDGLLNPAALEP+GGL+RTPTPDEVTANETARSLNLFEARA+SSNL
Sbjct: 121 ANIKFEHRWAGFDFFDGLLNPAALEPIGGLTRTPTPDEVTANETARSLNLFEARASSSNL 180

Query: 20  ASTSTQ 3
           ASTSTQ
Sbjct: 181 ASTSTQ 186


>dbj|BAG12157.1| coat protein [Plantago asiatica mosaic virus]
          Length = 207

 Score =  340 bits (871), Expect = 2e-91
 Identities = 167/186 (89%), Positives = 181/186 (97%)
 Frame = -2

Query: 560 MALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 381
           MALN+APT+DAL AMTF VSSPSVPTA EL TI++GLTTLG+PAD LLSHALAVVNACFD
Sbjct: 1   MALNQAPTSDALNAMTFDVSSPSVPTAAELATITQGLTTLGVPADSLLSHALAVVNACFD 60

Query: 380 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFAR 201
           AGSSAFVTLSGPSPTATISLAQ+AGV+KVTTTLRKFCR+YAK+IWNARL+RNLPPAGFAR
Sbjct: 61  AGSSAFVTLSGPSPTATISLAQIAGVVKVTTTLRKFCRFYAKIIWNARLSRNLPPAGFAR 120

Query: 200 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL 21
           ANIKFEHRWAGFDFFDGLLNPAALEP+GGL+RTPTPDEVTANETARSLNLFEARA++SNL
Sbjct: 121 ANIKFEHRWAGFDFFDGLLNPAALEPIGGLTRTPTPDEVTANETARSLNLFEARASNSNL 180

Query: 20  ASTSTQ 3
           ASTSTQ
Sbjct: 181 ASTSTQ 186


>dbj|BAG12142.1| coat protein [Plantago asiatica mosaic virus]
          Length = 207

 Score =  340 bits (871), Expect = 2e-91
 Identities = 168/186 (90%), Positives = 181/186 (97%)
 Frame = -2

Query: 560 MALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 381
           MALN+APT+DAL AMTF VSSPSVPTAEEL TI++GLTTLG+PAD LLSHALAVVNACFD
Sbjct: 1   MALNQAPTSDALNAMTFAVSSPSVPTAEELATITQGLTTLGVPADSLLSHALAVVNACFD 60

Query: 380 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFAR 201
           AGSSAFVTLSGPSPTATISLAQ+AGV+KVTTTLRKFCR+YAK+IWNARL+RNLPPAGFAR
Sbjct: 61  AGSSAFVTLSGPSPTATISLAQIAGVVKVTTTLRKFCRFYAKIIWNARLSRNLPPAGFAR 120

Query: 200 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL 21
           ANIKFEHRWAGFD FDGLLNPAALEP+GGL+RTPTPDEVTANETARSLNLFEARA+SSNL
Sbjct: 121 ANIKFEHRWAGFDSFDGLLNPAALEPIGGLTRTPTPDEVTANETARSLNLFEARASSSNL 180

Query: 20  ASTSTQ 3
           ASTSTQ
Sbjct: 181 ASTSTQ 186


>gb|AGW45385.1| coat protein [Plantago asiatica mosaic virus]
          Length = 207

 Score =  335 bits (860), Expect = 4e-90
 Identities = 165/186 (88%), Positives = 180/186 (96%)
 Frame = -2

Query: 560 MALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 381
           MALN+AP+ DAL AMTF VSSPSVPTA EL+TI++GLTTLG+PA+ LLSHAL+VVNACFD
Sbjct: 1   MALNQAPSPDALDAMTFAVSSPSVPTAAELDTITRGLTTLGVPAEALLSHALSVVNACFD 60

Query: 380 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFAR 201
           AGSSAFVTLSGPSPTATISLAQ+AGV+KVTTTLRKFCR+YAK IWNARL+RNLPPAGFAR
Sbjct: 61  AGSSAFVTLSGPSPTATISLAQIAGVVKVTTTLRKFCRFYAKTIWNARLSRNLPPAGFAR 120

Query: 200 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL 21
           ANIKFEHRWAGFDFFDGLLNPAALEPLGGL+RTPTPDEVTANETARSLNLFEARA++SNL
Sbjct: 121 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLTRTPTPDEVTANETARSLNLFEARASTSNL 180

Query: 20  ASTSTQ 3
           ASTSTQ
Sbjct: 181 ASTSTQ 186


>ref|NP_620840.1| capsid protein [Plantago asiatica mosaic virus]
           gi|1168989|sp|Q07506.1|COAT_P1AMV RecName: Full=Coat
           protein; AltName: Full=Capsid protein; Short=CP
           gi|311649|emb|CAA79765.1| capsid protein [Plantago
           asiatica mosaic virus]
          Length = 207

 Score =  335 bits (860), Expect = 4e-90
 Identities = 166/186 (89%), Positives = 177/186 (95%)
 Frame = -2

Query: 560 MALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 381
           MALN APTADALAAM F VSSPSVPTA+EL+TI+ GLTTLG+P D LLSHALA+VNACFD
Sbjct: 1   MALNTAPTADALAAMAFPVSSPSVPTAQELDTITSGLTTLGVPTDSLLSHALALVNACFD 60

Query: 380 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFAR 201
           AGSS+FVTLSGPSPT TISLAQ+AGV+KVTTTLRKFCR+YAK+IWNARLARNLPPAGFAR
Sbjct: 61  AGSSSFVTLSGPSPTPTISLAQIAGVVKVTTTLRKFCRFYAKIIWNARLARNLPPAGFAR 120

Query: 200 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL 21
           ANIKFEHRWAGFDFFDGLLNPAALEP GGLSRTPTPDEVTANETARSLNLFEARA+ SNL
Sbjct: 121 ANIKFEHRWAGFDFFDGLLNPAALEPPGGLSRTPTPDEVTANETARSLNLFEARASYSNL 180

Query: 20  ASTSTQ 3
           ASTSTQ
Sbjct: 181 ASTSTQ 186


>ref|NP_702992.1| coat protein [Tulip virus X] gi|23491558|dbj|BAC16789.1| coat
           protein [Tulip virus X]
          Length = 207

 Score =  300 bits (768), Expect = 2e-79
 Identities = 145/186 (77%), Positives = 168/186 (90%)
 Frame = -2

Query: 560 MALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 381
           MALN AP  +ALAAMT +VSSP+VPT  EL+TI+ GLTTLG+PAD L+SHALA+VNACFD
Sbjct: 1   MALNTAPNPEALAAMTLEVSSPAVPTPAELDTIAAGLTTLGVPADSLISHALALVNACFD 60

Query: 380 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFAR 201
           AGSS F T+SGPSPT TI+LAQ+AGV+KV+TTLRKFCR+YAK+IWNARL+RN PPAGFAR
Sbjct: 61  AGSSQFTTISGPSPTPTITLAQLAGVVKVSTTLRKFCRFYAKLIWNARLSRNRPPAGFAR 120

Query: 200 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL 21
           A +K   +WAGFDFFDGLLNPAALEPLGGL+R PTPDE+TANETARSL LFE+RANS+NL
Sbjct: 121 AYVKTGQKWAGFDFFDGLLNPAALEPLGGLTREPTPDEITANETARSLGLFESRANSNNL 180

Query: 20  ASTSTQ 3
           A+TSTQ
Sbjct: 181 ATTSTQ 186


>gb|ACE62921.1| coat protein [Tulip virus X]
          Length = 207

 Score =  299 bits (765), Expect = 4e-79
 Identities = 145/186 (77%), Positives = 168/186 (90%)
 Frame = -2

Query: 560 MALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 381
           MALN APT +ALAAMT  VSSP+VPT  ELETI+ GLTTLG+P D L+SHALA+VNACFD
Sbjct: 1   MALNTAPTPEALAAMTLAVSSPAVPTPLELETITAGLTTLGVPTDSLISHALALVNACFD 60

Query: 380 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFAR 201
           AGSS F TLSGPSPT+TI+LAQ+AGV+KV+TTLRKFCR+YAK+IWNARL+RN PPAGFAR
Sbjct: 61  AGSSQFTTLSGPSPTSTITLAQIAGVVKVSTTLRKFCRFYAKLIWNARLSRNQPPAGFAR 120

Query: 200 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL 21
           A +K   +WAGFDFFDGLLNPAALEPLGGL+R PTPDE+TANETARSL LFE+RANS++L
Sbjct: 121 AYVKTGQKWAGFDFFDGLLNPAALEPLGGLTREPTPDEITANETARSLGLFESRANSNSL 180

Query: 20  ASTSTQ 3
           A+T+TQ
Sbjct: 181 ATTATQ 186


>gb|AAW30636.1| coat protein [Tulip virus X]
          Length = 157

 Score =  235 bits (600), Expect = 5e-60
 Identities = 111/136 (81%), Positives = 127/136 (93%)
 Frame = -2

Query: 410 ALAVVNACFDAGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLA 231
           ALA+VNACFDAGSS F TLSGPSPT  ++LAQ+AGV+KV+TTLRKFCR+YAK+IWNARL+
Sbjct: 1   ALALVNACFDAGSSQFTTLSGPSPTPAVTLAQIAGVVKVSTTLRKFCRFYAKLIWNARLS 60

Query: 230 RNLPPAGFARANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNL 51
           RNLPPAGFARA +K  H+WAGFDFFDGLLNPAALEPLGGL+R PTPDE+TANETARSL L
Sbjct: 61  RNLPPAGFARAYVKTGHKWAGFDFFDGLLNPAALEPLGGLTREPTPDEITANETARSLGL 120

Query: 50  FEARANSSNLASTSTQ 3
           FE+RANS+NLA+TSTQ
Sbjct: 121 FESRANSNNLATTSTQ 136


>ref|NP_042699.1| coat protein [Cassava common mosaic virus] gi|773409|gb|AAC54779.1|
           coat protein [Cassava common mosaic virus]
           gi|1587827|prf||2207297E ORF 5
          Length = 229

 Score =  202 bits (515), Expect = 4e-50
 Identities = 100/185 (54%), Positives = 134/185 (72%)
 Frame = -2

Query: 557 ALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFDA 378
           AL+ APT + L+ +  + +S  V +A+ L  I+    +L +P   L+ HAL +VN CFD+
Sbjct: 24  ALSTAPTDEELSRLDLKPASNLVASADALSAIAADWASLKVPTAQLMRHALDLVNFCFDS 83

Query: 377 GSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFARA 198
           GSS + T+ G SPT TI  A +AG ++  TTLR+FCRYYAK+IWNAR+  N+PPAG+A A
Sbjct: 84  GSSKYTTVEGSSPTPTIPRAALAGAVRKHTTLRQFCRYYAKIIWNARVKANIPPAGYANA 143

Query: 197 NIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNLA 18
           +IK E  +AGFDFFDG++N AALEP GGL R PTP E+ A ETARSLNLFEA++  +NLA
Sbjct: 144 HIKPEQAFAGFDFFDGVMNVAALEPSGGLVREPTPQEIIAAETARSLNLFEAQSKGNNLA 203

Query: 17  STSTQ 3
           + +TQ
Sbjct: 204 TNATQ 208


>ref|YP_224088.1| coat protein [Hydrangea ringspot virus] gi|56792009|gb|AAW30452.1|
           coat protein [Hydrangea ringspot virus]
          Length = 225

 Score =  178 bits (452), Expect = 8e-43
 Identities = 96/189 (50%), Positives = 123/189 (65%), Gaps = 1/189 (0%)
 Frame = -2

Query: 566 STMALNKAPTA-DALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNA 390
           ST +   AP + + L  ++F V+S  VP+  EL  I+   TTLG+PA     HALA+VN 
Sbjct: 17  STPSAAFAPLSQEVLETLSFPVTSNLVPSPTELAAIADAWTTLGVPAAETTKHALALVNF 76

Query: 389 CFDAGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAG 210
           CFD+GSSA    +G SPT TI L+ +AG +     +RKFCRY+A+ IWNARL  N PPA 
Sbjct: 77  CFDSGSSATTRFTGASPTPTIPLSALAGAVLELVPIRKFCRYFAQYIWNARLTANAPPAS 136

Query: 209 FARANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANS 30
           +   N     ++AGFDFFDG+LN A+L+P  GL R PT  E  AN TA+SL+LFEA    
Sbjct: 137 WEAWNFPENEKFAGFDFFDGVLNTASLKPPQGLVRKPTEAERVANATAKSLHLFEAATQR 196

Query: 29  SNLASTSTQ 3
           SNLAST+TQ
Sbjct: 197 SNLASTATQ 205


>gb|ADE10206.1| coat protein [Hydrangea ringspot virus]
          Length = 225

 Score =  176 bits (447), Expect = 3e-42
 Identities = 95/189 (50%), Positives = 122/189 (64%), Gaps = 1/189 (0%)
 Frame = -2

Query: 566 STMALNKAPTA-DALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNA 390
           ST +   AP + + L  ++F V+S  VP+  EL  I+   TTLG+PA     HALA+VN 
Sbjct: 17  STPSAAFAPLSQEVLETLSFPVTSNLVPSPTELAAIADAWTTLGVPAAETTKHALALVNF 76

Query: 389 CFDAGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAG 210
           CFD+GSSA    +G SPT  I L+ +AG +     +RKFCRY+A+ IWNARL  N PPA 
Sbjct: 77  CFDSGSSATTRFTGASPTPAIPLSALAGAVLELVPIRKFCRYFAQYIWNARLTANAPPAS 136

Query: 209 FARANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANS 30
           +   N     ++AGFDFFDG+LN A+L+P  GL R PT  E  AN TA+SL+LFEA    
Sbjct: 137 WEAWNFPENEKFAGFDFFDGVLNTASLKPPQGLVRKPTEAERVANATAKSLHLFEAATQR 196

Query: 29  SNLASTSTQ 3
           SNLAST+TQ
Sbjct: 197 SNLASTATQ 205


>dbj|BAA00373.1| 28.1K protein [Clover yellow mosaic virus]
          Length = 257

 Score =  159 bits (402), Expect = 5e-37
 Identities = 83/189 (43%), Positives = 120/189 (63%)
 Frame = -2

Query: 572 TYSTMALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVN 393
           T +   L  APT + L  +T  + S  VP+  ELE I+K   TLG+      ++A+ +  
Sbjct: 47  TDTKKTLFSAPTDEQLDTLTLTIESNLVPSISELEAIAKDWKTLGLQEADFTANAIKIAW 106

Query: 392 ACFDAGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPA 213
            C+ +GSS  V + G S +  I L Q+AGV++  +TLR+FCRY+AKVIWN  L +N PPA
Sbjct: 107 FCYHSGSSESVQVQGNSTSDKIPLYQLAGVVRQHSTLRRFCRYFAKVIWNYALRKNQPPA 166

Query: 212 GFARANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARAN 33
            +A  N K   R+A FDFF+G+ + AAL P GGL R P+P+E  ANET ++++L++  + 
Sbjct: 167 NWASQNYKEADRFAAFDFFEGVSSSAALSPPGGLIREPSPNERMANETNKNVHLYQTASR 226

Query: 32  SSNLASTST 6
            SNLA+TST
Sbjct: 227 GSNLATTST 235


>ref|NP_077083.1| coat protein [Clover yellow mosaic virus]
           gi|116740|sp|P16486.1|COAT_CYMV RecName: Full=Coat
           protein; AltName: Full=Capsid protein; Short=CP
           gi|221222|dbj|BAA00375.1| coat protein [Clover yellow
           mosaic virus]
          Length = 212

 Score =  159 bits (402), Expect = 5e-37
 Identities = 83/189 (43%), Positives = 120/189 (63%)
 Frame = -2

Query: 572 TYSTMALNKAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVN 393
           T +   L  APT + L  +T  + S  VP+  ELE I+K   TLG+      ++A+ +  
Sbjct: 2   TDTKKTLFSAPTDEQLDTLTLTIESNLVPSISELEAIAKDWKTLGLQEADFTANAIKIAW 61

Query: 392 ACFDAGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPA 213
            C+ +GSS  V + G S +  I L Q+AGV++  +TLR+FCRY+AKVIWN  L +N PPA
Sbjct: 62  FCYHSGSSESVQVQGNSTSDKIPLYQLAGVVRQHSTLRRFCRYFAKVIWNYALRKNQPPA 121

Query: 212 GFARANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARAN 33
            +A  N K   R+A FDFF+G+ + AAL P GGL R P+P+E  ANET ++++L++  + 
Sbjct: 122 NWASQNYKEADRFAAFDFFEGVSSSAALSPPGGLIREPSPNERMANETNKNVHLYQTASR 181

Query: 32  SSNLASTST 6
            SNLA+TST
Sbjct: 182 GSNLATTST 190


>ref|YP_054406.1| coat protein [Zygocactus virus X] gi|38146351|gb|AAR11546.1| coat
           protein [Zygocactus virus X]
          Length = 226

 Score =  158 bits (399), Expect = 1e-36
 Identities = 86/177 (48%), Positives = 112/177 (63%)
 Frame = -2

Query: 539 TADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFDAGSSAFV 360
           TA  LAA+T  V+S  +P+ EEL  +S  LT LG  +  +   AL VVN CFD GSS   
Sbjct: 28  TAAQLAALTLGVTSSLLPSPEELVQLSNALTALGASSSNVSQVALEVVNYCFDNGSSPET 87

Query: 359 TLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFARANIKFEH 180
              G S    I L++VA  I   TTLR+FCRY+AK+IWN R++RNLPPA +     K E 
Sbjct: 88  VFKGNSNLLQIPLSKVAQAITQVTTLRQFCRYFAKLIWNYRVSRNLPPAAWEAWAYKPEQ 147

Query: 179 RWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNLASTS 9
           ++A FDFFDG+LN AAL+P  GL R P   E  AN+T R+++LFE+ A  S + +TS
Sbjct: 148 KFAAFDFFDGVLNEAALQPTDGLVRLPNEAERLANQTNRNVHLFESNAQKSRVLTTS 204


>ref|YP_004849318.1| coat protein [Tamus red mosaic virus] gi|345548101|gb|AEO12144.1|
           coat protein [Tamus red mosaic virus]
          Length = 221

 Score =  157 bits (397), Expect = 2e-36
 Identities = 79/180 (43%), Positives = 112/180 (62%)
 Frame = -2

Query: 548 KAPTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFDAGSS 369
           KAPT D L  MTF V+S  +P+ EE + IS+    LGI  D L  +A+ +   C+ +GSS
Sbjct: 20  KAPTLDRLKLMTFDVNSTLLPSTEEFKLISEDWAKLGISGDSLTENAMKLATFCYHSGSS 79

Query: 368 AFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFARANIK 189
               + G S    +SL+++AGV+ + T+LRKFCRY+A +IWN  +   +PPA +   + K
Sbjct: 80  TTTEMRGESSKPGVSLSRLAGVVNMHTSLRKFCRYFAPLIWNIHVESKIPPAAWQSKDFK 139

Query: 188 FEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNLASTS 9
              ++A FDFFDG+ N  +++P GGL R PT  E  AN TAR+L LFEA A  + +AS S
Sbjct: 140 EGEKFAAFDFFDGVENVGSIKPPGGLIRKPTDKERIANATARALKLFEAAAQQNRMASNS 199


>ref|YP_002647031.1| coat protein [Allium virus X] gi|224579239|gb|ACN58198.1| coat
           protein [Allium virus X]
          Length = 225

 Score =  155 bits (391), Expect = 9e-36
 Identities = 81/198 (40%), Positives = 120/198 (60%), Gaps = 10/198 (5%)
 Frame = -2

Query: 575 KTYSTMALNKA----------PTADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPAD 426
           KT +T  L+KA          P  + L+AMTF +++ S+PT  EL  I++   TLG+P +
Sbjct: 4   KTAATNVLSKAVNSNAIPFTTPKPEELSAMTFTLNNRSLPTPGELIAIAEQWKTLGVPGE 63

Query: 425 GLLSHALAVVNACFDAGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIW 246
            + +HAL +   C+ +GSS    ++G S T  ++LAQ+AGV+   TTLRKFCR++A ++W
Sbjct: 64  AVTTHALQLTMFCYHSGSSPNTEITGDSATPKVTLAQLAGVVMQHTTLRKFCRFFAPLVW 123

Query: 245 NARLARNLPPAGFARANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETA 66
           N  L   +PPA +   N   + ++A FDFFDG+ N  ++ P  GL R PTP E+ A+ TA
Sbjct: 124 NWALDHKIPPASWQANNFPPDEKYAAFDFFDGVTNGGSMLPADGLRRQPTPKELIAHATA 183

Query: 65  RSLNLFEARANSSNLAST 12
           +S N+F A  N    AST
Sbjct: 184 QSTNIFTASQNQLQTAST 201


>gb|AFU63340.1| coat protein [Alternanthera mosaic virus]
          Length = 207

 Score =  152 bits (383), Expect = 8e-35
 Identities = 80/178 (44%), Positives = 115/178 (64%), Gaps = 1/178 (0%)
 Frame = -2

Query: 539 TADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFDAGSSAFV 360
           T + + A T   +S  +P+ E+L TI+  L    +PA    + AL +VN C+D GSSA+ 
Sbjct: 9   TQEQMNAFTPHATSNLLPSPEQLTTIASLLVAAKVPAASTTTIALELVNFCYDNGSSAYT 68

Query: 359 TLSGPSPTATISLAQVAGVIKVT-TTLRKFCRYYAKVIWNARLARNLPPAGFARANIKFE 183
            + GPS  A +SL+QVA ++K + T+LRKFCR++A +IWN R  + +PPA +     K  
Sbjct: 69  AVVGPSSLAEVSLSQVANIVKASGTSLRKFCRFFAPIIWNLRTDK-MPPANWEANGFKPT 127

Query: 182 HRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNLASTS 9
            ++A FDFFDG+ NPAA++P GGL RTP+  E  AN T + +NLF+A A  +NLAS S
Sbjct: 128 EKFAAFDFFDGVENPAAMQPPGGLVRTPSQAERIANATNKQVNLFQAAAQDNNLASNS 185


>gb|AAO85393.1| capsid protein [Cactus virus X]
          Length = 225

 Score =  150 bits (380), Expect = 2e-34
 Identities = 79/177 (44%), Positives = 111/177 (62%)
 Frame = -2

Query: 539 TADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFDAGSSAFV 360
           ++  LAA++  V+S  +P+  EL +IS+ LTTLG  A  L   +L +VN CFD GSS   
Sbjct: 27  SSSQLAALSLGVTSSLLPSPAELVSISQALTTLGASATNLTPLSLEIVNYCFDNGSSPET 86

Query: 359 TLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKVIWNARLARNLPPAGFARANIKFEH 180
              G S    + L++VA  I   TTLR+FCRY+AK+IWN R+++NLPPA +     K E 
Sbjct: 87  VFKGDSAVLQMPLSKVAHAITQFTTLRQFCRYFAKIIWNYRISKNLPPAAWEAWAYKPEQ 146

Query: 179 RWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNLASTS 9
           ++A FDFFDG+LN AAL P+ GL R P   E  AN+T  +++ FE+ A  +   +TS
Sbjct: 147 KFAAFDFFDGVLNEAALNPIDGLGRVPNEAERLANQTNCNVHFFESNAQKNRALTTS 203


>gb|AFB81318.1| coat protein [Alternanthera mosaic virus]
          Length = 207

 Score =  150 bits (379), Expect = 2e-34
 Identities = 79/178 (44%), Positives = 114/178 (64%), Gaps = 1/178 (0%)
 Frame = -2

Query: 539 TADALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFDAGSSAFV 360
           T + + A T   +S  +P+ E+L TI+  L    +PA    + AL +VN C+D GSS + 
Sbjct: 9   TQEQMNAFTPHATSNLLPSPEQLTTIASLLVAAKVPAASTTTIALELVNFCYDNGSSTYT 68

Query: 359 TLSGPSPTATISLAQVAGVIKVT-TTLRKFCRYYAKVIWNARLARNLPPAGFARANIKFE 183
            + GPS  A +SL+QVA ++K + T+LRKFCR++A +IWN R  + +PPA +     K  
Sbjct: 69  AVVGPSSLAEVSLSQVANIVKASGTSLRKFCRFFAPIIWNLRTDK-MPPANWEANGFKPT 127

Query: 182 HRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNLASTS 9
            ++A FDFFDG+ NPAA++P GGL RTP+  E  AN T + +NLF+A A  +NLAS S
Sbjct: 128 EKFAAFDFFDGVENPAAMQPPGGLVRTPSQAERIANATNKQVNLFQAAAQDNNLASNS 185