BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00017260
         (1299 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74029.1| hypothetical protein VITISV_013540 [Vitis vinifera]   287   8e-75
gb|AGW47867.1| polyprotein [Phaseolus vulgaris]                       276   2e-71
emb|CAN74767.1| hypothetical protein VITISV_041860 [Vitis vinifera]   267   8e-69
emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]        262   2e-67
emb|CAN80566.1| hypothetical protein VITISV_029672 [Vitis vinifera]   257   8e-66
gb|AAT93941.1| putative polyprotein [Oryza sativa Japonica Group]     254   4e-65
emb|CAE05248.2| OSJNBb0115I09.10 [Oryza sativa Japonica Group]        254   5e-65
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   252   3e-64
emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera]   247   9e-63
emb|CAN64335.1| hypothetical protein VITISV_001808 [Vitis vinifera]   241   6e-61
emb|CAN60373.1| hypothetical protein VITISV_034932 [Vitis vinifera]   234   8e-59
emb|CAN68682.1| hypothetical protein VITISV_024814 [Vitis vinifera]   233   1e-58
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...   227   7e-57
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...   225   3e-56
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]               225   4e-56
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                225   4e-56
gb|ABF95851.1| retrotransposon protein, putative, Ty1-copia subc...   224   6e-56
dbj|BAA96887.1| copia-like retroelement pol polyprotein [Arabido...   224   8e-56
gb|ABA97586.1| retrotransposon protein, putative, Ty1-copia subc...   218   3e-54
gb|EFA06256.1| hypothetical protein TcasGA2_TC009115 [Tribolium ...   218   3e-54

>emb|CAN74029.1| hypothetical protein VITISV_013540 [Vitis vinifera]
          Length = 894

 Score =  287 bits (734), Expect = 8e-75
 Identities = 160/434 (36%), Positives = 242/434 (55%), Gaps = 4/434 (0%)
 Frame = +3

Query: 3    FQTFIKFCKLVQNEKSYKIGCLRSDGGTEYNSIIFKKICENKGIKRQVIVPYNPQQNGVS 182
            F  F +F  LV+N+ +  I  LRSD GTEY S  F + C   GI+ Q+  PY PQQNGVS
Sbjct: 135  FSVFKQFKALVENQSNLSIKILRSDNGTEYTSSQFVEFCSTAGIECQLTTPYTPQQNGVS 194

Query: 183  KR*NRTLVDAVRCLLHDANLDKVWWGEALLTANYITNHWPNKSLDMKFPMEVLYRVKSNI 362
            +R NRT+++  RCLL +  +   +W EA+ T+ Y+ N  P KSL  K P E  Y VK  +
Sbjct: 195  ERKNRTVMEMARCLLFEKKMPSNFWAEAVNTSVYLLNRLPTKSLKNKTPYEEWYGVKPFV 254

Query: 363  SHLMEFGKTYYYLIPKEKRRKLDDKAKKGIFIGYPTRTKGYRLIDMEIRNIIISREIKEA 542
            +HL  FG   YY +P+ KR KLD +A+KGI IGY T TKGYR+  ++   +++SR +K  
Sbjct: 255  NHLKIFGSICYYHVPEPKRSKLDSRAQKGILIGYGTSTKGYRIFCLQTNKVVLSRNVKVD 314

Query: 543  DIESFE--NNKNIPKETTXXXXXXXXXXXXMETTIPKGLKI*PLWYKLMIQEAENFVKGK 716
            ++ +++  N K    +              ++    +G           I+  E+  +  
Sbjct: 315  EMATWDCKNKKYAQSDVDFNNHEDFQTSKSVDDFPVRG-----------IRSLEDIYQR- 362

Query: 717  IIEANICFSIDLEIPKSPTEAIKKQHWKNAMDEEMTNMKNKNVWRLEELPEGKKEVGCTW 896
                    S+ +  P S  EA   + W+ AM EE+  +     W+L E P+  K +G  W
Sbjct: 363  -------CSLAITEPTSYVEAKDSEAWRRAMQEELKMINKNETWQLVERPKNHKVIGVKW 415

Query: 897  LYTIKLKPYGSLDKYKA*LVVQGFTQKEGIDYKDTFAPIAKMRTIRNIISLATKKGWESH 1076
            ++  KL   GS+ K+KA LVV+G+ Q+ G+DYK+TFAP+A+  TIR +  LA +  W  H
Sbjct: 416  VFKTKLNSDGSICKHKAKLVVKGYAQQYGVDYKETFAPVARYDTIRLLFVLAAQNSWHIH 475

Query: 1077 LLDVKNAFLNGDITEEIYMKQPK--CYEDQNNLSCRILKSLYGFK*ASRA*YKKLEEFLS 1250
             LDVK+AFLNG + +EIY++QP       + +    + K+LYG K A RA Y+ +++ L+
Sbjct: 476  QLDVKSAFLNGFVDKEIYVEQPDGVVAPSKEDYVYLLRKALYGLKQAPRAWYETMDKHLT 535

Query: 1251 LQGFIKFISDPNLF 1292
              GF++  S+  L+
Sbjct: 536  KLGFVRSQSEATLY 549


>gb|AGW47867.1| polyprotein [Phaseolus vulgaris]
          Length = 1471

 Score =  276 bits (705), Expect = 2e-71
 Identities = 155/424 (36%), Positives = 236/424 (55%), Gaps = 4/424 (0%)
 Frame = +3

Query: 3    FQTFIKFCKLVQNEKSYKIGCLRSDGGTEYNSIIFKKICENKGIKRQVIVPYNPQQNGVS 182
            F+ F KF  +V+     +I  +RSD G EY S  F + CE +GI+R +  PY PQQNGV+
Sbjct: 593  FEVFKKFKVMVERTTDKQIKAVRSDRGGEYTSTTFMEYCEEQGIRRFLTAPYTPQQNGVA 652

Query: 183  KR*NRTLVDAVRCLLHDANLDKVWWGEALLTANYITNHWPNKSLDMKFPMEVLYRVKSNI 362
            +R NRT++D VR +L    + K +W EA+  A Y+ N  P+  LD + P E     K  +
Sbjct: 653  ERKNRTILDMVRSMLKSKKMPKEFWAEAVQCAIYVQNRCPHVKLDDQTPQEAWSGQKPTV 712

Query: 363  SHLMEFGKTYYYLIPKEKRRKLDDKAKKGIFIGYPTRTKGYRLIDMEIRNIIISREIK-- 536
            SHL  FG   Y  +P ++R KL+DK+K+ +FIGY  +TKGY+L+D   + + +SR+++  
Sbjct: 713  SHLKVFGSVAYAHVPDQRRTKLEDKSKRYVFIGYDEKTKGYKLLDPISKKVTVSRDVQIN 772

Query: 537  EADIESFENNKNIPKETTXXXXXXXXXXXXMETTIPKGLKI*PLWYKLMIQEAENFVKGK 716
            EA    + N+  +  E               +   P+  KI  L     + ++ N V   
Sbjct: 773  EASEWDWNNSSEVMIEVGESSPTSINSETTDDEDEPRQPKIRSLHD---LYDSTNEVH-- 827

Query: 717  IIEANICFSIDLEIPKSPTEAIKKQHWKNAMDEEMTNMKNKNVWRLEELPEGKKEVGCTW 896
                 +C   D E   S  EA++ + W+ AMDEE+  +   N W L ELPEG + +G  W
Sbjct: 828  ----LVCLLADAE-NISFEEAVRDKKWQTAMDEEIKAIDRNNTWELTELPEGSQPIGVKW 882

Query: 897  LYTIKLKPYGSLDKYKA*LVVQGFTQKEGIDYKDTFAPIAKMRTIRNIISLATKKGWESH 1076
            ++  K+   G +++YKA LV +G+ QKEGIDY + FAP+ +M TIR +IS A +  W   
Sbjct: 883  IFKKKMNAQGEIERYKARLVAKGYKQKEGIDYDEVFAPVVRMETIRLLISQAAQFKWPIF 942

Query: 1077 LLDVKNAFLNGDITEEIYMKQPKCYE--DQNNLSCRILKSLYGFK*ASRA*YKKLEEFLS 1250
             +DVK+AFLNG + EE+Y++QP  Y    +     ++ K+LYG K A RA   +++ +  
Sbjct: 943  QMDVKSAFLNGVLEEEVYIEQPPGYMKIGEEKKVLKLKKALYGLKQAPRAWNTRIDTYFK 1002

Query: 1251 LQGF 1262
              GF
Sbjct: 1003 ENGF 1006


>emb|CAN74767.1| hypothetical protein VITISV_041860 [Vitis vinifera]
          Length = 1945

 Score =  267 bits (682), Expect = 8e-69
 Identities = 156/441 (35%), Positives = 242/441 (54%), Gaps = 14/441 (3%)
 Frame = +3

Query: 12   FIKFCKLVQNEKSYKIGCLRSDGGTEYNSIIFKKICENKGIKRQVIVPYNPQQNGVSKR* 191
            F  F K+V+ +       L +D G EY S  F   C+  GI  Q+  PY+PQQNGVS+R 
Sbjct: 641  FKSFKKMVETQSGQNXKVLXTDNGGEYISKEFNVFCQEAGIVHQLTAPYSPQQNGVSERK 700

Query: 192  NRTLVDAVRCLLHDANLDKVWWGEALLTANYITNHWPNKSLDMKFPMEVLYRVKSNISHL 371
            N+T+++  RC+L +  L K+ W EA+ T+ Y+ N  P KS+  K P++    VK ++ HL
Sbjct: 701  NKTVMEMARCMLFEKKLPKLLWAEAVNTSVYLLNRLPTKSVQSKTPIKAWSGVKPSVKHL 760

Query: 372  MEFGKTYYYLIPKEKRRKLDDKAKKGIFIGYPTRTKGYRLIDMEIRNIIISREIKEADIE 551
              FG   Y  +P  KR KLD++A+KG+F+GY   +KGYR+  +    I+ISR++   D  
Sbjct: 761  KVFGSFCYLHVPSVKRGKLDERAEKGVFVGYAAESKGYRIYSLSRMKIVISRDV-HFDEN 819

Query: 552  SFENNKNIPKETTXXXXXXXXXXXXMETTIPKG------------LKI*PLWYKLMIQEA 695
            S+ N  ++ K               +E+TI +G            LK+ PL        +
Sbjct: 820  SYWN-WDLKKVHKCDQTTPSILEPAIESTIIEGPLDVEATSDTPVLKMRPL--------S 870

Query: 696  ENFVKGKIIEANICFSIDLEIPKSPTEAIKKQHWKNAMDEEMTNMKNKNVWRLEELPEGK 875
            + + +  ++ A          P   TEA +   W  AM  E+  ++    W+L ELPE K
Sbjct: 871  DVYERCNLVHAE---------PTCYTEAARFLEWIEAMKAEIDAIERNGTWKLTELPEAK 921

Query: 876  KEVGCTWLYTIKLKPYGSLDKYKA*LVVQGFTQKEGIDYKDTFAPIAKMRTIRNIISLAT 1055
              +G  W++  K    GS+ ++KA LVV+GF Q  G+DY DTFAP+A+  TIR +++LA 
Sbjct: 922  NAIGVKWVFRTKFNSDGSIFRHKARLVVKGFAQVAGVDYGDTFAPVARHDTIRLLLALAG 981

Query: 1056 KKGWESHLLDVKNAFLNGDITEEIYMKQPKCYE--DQNNLSCRILKSLYGFK*ASRA*YK 1229
            + GW+ + LDVK+AFLNG + EEIY++QP+ +E     +   ++ K+LYG K A RA Y 
Sbjct: 982  QMGWKVYHLDVKSAFLNGILLEEIYVQQPEGFEVIGHEHKVYKLHKALYGLKQAPRAWYS 1041

Query: 1230 KLEEFLSLQGFIKFISDPNLF 1292
            +++  L   GF +  ++  L+
Sbjct: 1042 RIDSHLIQLGFRRSENEATLY 1062


>emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]
          Length = 1358

 Score =  262 bits (670), Expect = 2e-67
 Identities = 149/432 (34%), Positives = 246/432 (56%), Gaps = 12/432 (2%)
 Frame = +3

Query: 3    FQTFIKFCKLVQNEKSYKIGCLRSDGGTEYNSIIFKKICENKGIKRQVIVPYNPQQNGVS 182
            F+ F  +   V+ +K  +I  LRSD G EY +  F   CE +GI  +   PY PQQNG++
Sbjct: 595  FEAFKIYKAEVEKQKEKRIKILRSDRGGEYFNRRFDAFCEEEGIIHERTAPYTPQQNGLA 654

Query: 183  KR*NRTLVDAVRCLLHDANLDKVWWGEALLTANYITNHWPNKSLDMKFPMEVLYRVKSNI 362
            +R NRTLV+   C+L+ + L +  WGEA+LTA Y+ N   ++ +    P E+    K N+
Sbjct: 655  ERKNRTLVEMANCMLNQSGLPRNMWGEAVLTACYVHNRITSRVIPTS-PYELWKGRKPNL 713

Query: 363  SHLMEFGKTYYYLIPKEKRRKLDDKAKKGIFIGYPTRTKGYRLIDMEIRNIIISREIKEA 542
             HL  +G   YY +P  K  KL ++A K +FIGY + +K YRL+D E   ++ SR+++  
Sbjct: 714  EHLRVWGCLAYYRVPDPKTLKLGERAFKSVFIGYASHSKSYRLLDDESGIVVESRDVEFF 773

Query: 543  DIESFENNKNIPKETTXXXXXXXXXXXXM------ETTIPKGLKI*PLWYKLMIQEAENF 704
            + +   +++N    TT            +       T + K       ++  +++  +  
Sbjct: 774  ENKFSRDDENSNGTTTSSTSEKRVQPSPIVEEPRKSTRVRKEKSYGDDFFSYLVEGTQKK 833

Query: 705  VKGKIIEANICFSIDLEI-PKSPTEAIKKQH---WKNAMDEEMTNMKNKNVWRLEELPEG 872
            V  ++I     F+++L+  PK+  EA+  +    WK A+++EM ++     W L +LP+G
Sbjct: 834  VMREVI-----FAVNLDDDPKTFNEAMSSRDAPLWKEAVNDEMDSIMGNGTWELADLPKG 888

Query: 873  KKEVGCTWLYTIKLKPYGSLDKYKA*LVVQGFTQKEGIDYKDTFAPIAKMRTIRNIISLA 1052
            KK +G  W++  K  P GS+  YKA LV +G+ Q+EG+DY DT+AP+A++ +IR +I+++
Sbjct: 889  KKPIGSKWIFKRKYHPDGSISAYKARLVAKGYRQREGVDYFDTYAPVARIGSIRTLIAVS 948

Query: 1053 TKKGWESHLLDVKNAFLNGDITEEIYMKQPKCY--EDQNNLSCRILKSLYGFK*ASRA*Y 1226
              KG   H +DVK AFLNG + EEIY++QP+ +    Q N  CR++KSLYG K A +  +
Sbjct: 949  ALKGLYIHQMDVKTAFLNGYLNEEIYLEQPEGFVMPGQENKVCRLIKSLYGLKQAPKQWH 1008

Query: 1227 KKLEEFLSLQGF 1262
            ++ +  ++  GF
Sbjct: 1009 ERFDTTVTAFGF 1020


>emb|CAN80566.1| hypothetical protein VITISV_029672 [Vitis vinifera]
          Length = 1636

 Score =  257 bits (656), Expect = 8e-66
 Identities = 156/471 (33%), Positives = 246/471 (52%), Gaps = 42/471 (8%)
 Frame = +3

Query: 6    QTFIKFCKLVQNEKSYKIGCLRSDGGTEYNSIIFKKICENKGIKRQVIVPYNPQQNGVSK 185
            Q F  F  ++Q +   KI  L+SD   +Y + I  +    +G+         PQQNG+++
Sbjct: 620  QIFKNFKNMIQTQFQSKIQILKSDNARDYFNSILGEFLAQEGLVHLSSCVDTPQQNGIAE 679

Query: 186  R*NRTLVDAVRCLLHDANLDKVWWGEALLTANYITNHWPNKSLDMKFPMEVLY------R 347
            R NR L++ VR L+   N+ K++WG+A+LTA Y+ N  P++ L  + P + L       R
Sbjct: 680  RKNRHLLEVVRSLMFSMNVPKLFWGQAVLTAAYLINRMPSRVLKFQTPCQTLLKSFPTTR 739

Query: 348  VKSNISHLMEFGKTYYYLIPKEKRRKLDDKAKKGIFIGYPTRTKGYRLIDMEIRNIIISR 527
            + S +   + FG + +  I ++ R KLD ++ K IF+GY ++ KGY+      R    S 
Sbjct: 740  LISTVPPKI-FGCSVFVHINQQHRSKLDPRSLKCIFLGYSSKQKGYKCYSPVTRKFYNSM 798

Query: 528  EIKEADIESFENNKNIPKETTXXXXXXXXXXXXMETTI-------PKGLK----I*PLWY 674
            ++   + + +    +I  E +             E+ I       PK       I  LW 
Sbjct: 799  DVTFFETQPYYPKNDIQGENSTQEYQFWDLESFSESPITTENHIPPKSFNQPEFIVDLWD 858

Query: 675  KLMIQEAE-----------------------NFVKGKIIEANICFSIDLEIPKSPTEAIK 785
            K  IQE                         N     I++++I    ++++P++  EA K
Sbjct: 859  KEHIQEETEERALSQQTHEAEPGPNPSKLPGNNAPDGIVDSDIT---EIQVPQNIQEAFK 915

Query: 786  KQHWKNAMDEEMTNMKNKNVWRLEELPEGKKEVGCTWLYTIKLKPYGSLDKYKA*LVVQG 965
               WK  ++EE+  ++    W + +LP GKK VGC W++T+K K  G++D+YKA LV +G
Sbjct: 916  YPKWKAVVNEEVRALEKNGTWEITDLPRGKKLVGCKWIFTVKYKADGNVDRYKARLVAKG 975

Query: 966  FTQKEGIDYKDTFAPIAKMRTIRNIISLATKKGWESHLLDVKNAFLNGDITEEIYMKQPK 1145
            FTQ  GIDY++TFAP+AK+ T+R ++SLA    W  H LDVKNAFLNGD+ EE+YM  P 
Sbjct: 976  FTQSYGIDYQETFAPVAKLNTVRVLLSLAANLDWSLHQLDVKNAFLNGDLEEEVYMDIPA 1035

Query: 1146 CYEDQNNLS--CRILKSLYGFK*ASRA*YKKLEEFLSLQGFIKFISDPNLF 1292
              E  +N +  CR+ KSLYG K + RA +++  + +   GF++  SD  LF
Sbjct: 1036 GLETTSNFNKVCRLRKSLYGLKQSPRAWFERFTKVVKGYGFVQCQSDHTLF 1086


>gb|AAT93941.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1433

 Score =  254 bits (650), Expect = 4e-65
 Identities = 155/430 (36%), Positives = 239/430 (55%), Gaps = 9/430 (2%)
 Frame = +3

Query: 33   VQNEKSYKIGCLRSDGGTEYNSIIFKKICENKGIKRQVIVPYNPQQNGVSKR*NRTLVDA 212
            V+N+   KI  LRSD G E+ S  F   CE  GI  +   PY+P+ NG+++R NRTL D 
Sbjct: 545  VENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDL 604

Query: 213  VRCLLHDANLDKVWWGEALLTANYITNHWPNKSLDMKFPMEVLYRVKSNISHLMEFGKTY 392
            V  +L  A L K WWGEALLT+N++ N  PN++ D K P E+    K ++S+L  +G   
Sbjct: 605  VNAMLDTAGLPKAWWGEALLTSNHVLNRVPNRNKD-KTPYEIWIGRKPSLSYLRTWGCLA 663

Query: 393  YYLIPKEKRRKLDDKAKKGIFIGYPTRTKGYR--LIDMEIRNIIISREIKEADIESFENN 566
               +P  K+RKL  K    +F+GY   +  YR  ++  E+ ++ +   ++  D   FE+ 
Sbjct: 664  KVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVLDMHVGTIMESRDATFFESF 723

Query: 567  KNIPKETTXXXXXXXXXXXXMETTIPKGLKI*PLWYKLMIQE--AENFVKGKIIEANICF 740
               P + T               T P+  +     ++L+ +E  +E   + K +  +   
Sbjct: 724  --FPMKDTHSGSNQPSEIILSSITPPEQTEH---THELVSEEDVSEALRRSKRLGDDFTV 778

Query: 741  SIDLEIPKSPTEAIKK---QHWKNAMDEEMTNMKNKNVWRLEELPEGKKEVGCTWLYTIK 911
             +  + PKS +EA       +WK A+  EM ++     W + E P G K VGC W++  K
Sbjct: 779  YLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKK 838

Query: 912  LKPYGSLDKYKA*LVVQGFTQKEGIDYKDTFAPIAKMRTIRNIISLATKKGWESHLLDVK 1091
            L+P G+++KYKA LV +G+TQKEG D+ DT++P+A++ TIR ++SLA   G   H +DVK
Sbjct: 839  LRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVK 898

Query: 1092 NAFLNGDITEEIYMKQPKCY--EDQNNLSCRILKSLYGFK*ASRA*YKKLEEFLSLQGFI 1265
             AFLNG++ EEIYM QP  +  E Q    C++LKSLYG K A +  ++K ++ L+  GF 
Sbjct: 899  TAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFG 958

Query: 1266 KFISDPNLFY 1295
               +D  ++Y
Sbjct: 959  VNEADKCVYY 968


>emb|CAE05248.2| OSJNBb0115I09.10 [Oryza sativa Japonica Group]
          Length = 1321

 Score =  254 bits (649), Expect = 5e-65
 Identities = 169/456 (37%), Positives = 242/456 (53%), Gaps = 28/456 (6%)
 Frame = +3

Query: 12   FIKFCKL-VQNEKSYKIGCLRSDGGTEYNSIIFKKICENKGIKRQVIVPYNPQQNGVSKR 188
            F K  K  V+N+   KI  LRSD G EY S  F   CE  GI  ++  PY+PQ NGV++R
Sbjct: 555  FFKIYKAEVENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIHEMTPPYSPQSNGVAER 614

Query: 189  *NRTLVDAVRCLLHDANLDKVWWGEALLTANYITNHWPNKSLDMKFPMEVLYRVKSNISH 368
             NRTL + V  +L  A L K WWGEA+LTA ++ N  P K  ++  P E   R K N+S+
Sbjct: 615  KNRTLTEMVNAMLDTAGLSKEWWGEAVLTACHVLNKIPMKHKEIT-PFEEWERKKLNLSY 673

Query: 369  LMEFGKTYYYLIPKEKRRKLDDKAKKGIFIGYPTRTKGYRLI-------DMEIRNIIISR 527
            L  +G      +P  KRRKL  K    +F+GY   + GYR +       DM +  I+ SR
Sbjct: 674  LRTWGCLAKVNVPIAKRRKLGPKTVDCVFLGYAIHSVGYRFLIVNSGVPDMHVGTILESR 733

Query: 528  EIKEADIESFENNKNIPKETTXXXXXXXXXXXXMETTIPKGLKI*PLWYKLMIQEAENFV 707
                 D   FEN    P + T             ET +P      P+ +     E EN  
Sbjct: 734  -----DATFFENE--FPMKYTPSTSSK-------ETVMPHE-HFAPIEHNDQTPE-ENPE 777

Query: 708  KGKIIEAN---------------ICFSIDLEIPKSPTEAIKK---QHWKNAMDEEMTNMK 833
            K  I++                 I + +D + P++  EA       +WK A+  EM ++ 
Sbjct: 778  KDNIVDTRKSKRQRVAKSFGDDYIVYLVD-DTPRTIEEAYSSPDADYWKEAVRSEMDSIM 836

Query: 834  NKNVWRLEELPEGKKEVGCTWLYTIKLKPYGSLDKYKA*LVVQGFTQKEGIDYKDTFAPI 1013
            + + W + E P G K VGC W++  KLKP G+++KYKA LV +G+TQKEG D+ DT++ +
Sbjct: 837  SNDTWEVVERPYGCKPVGCKWVFKKKLKPDGTIEKYKARLVAKGYTQKEGEDFFDTYSLV 896

Query: 1014 AKMRTIRNIISLATKKGWESHLLDVKNAFLNGDITEEIYMKQPKCY--EDQNNLSCRILK 1187
            A++ TIR +++LA   G   H +DVK AFLNG++ EEIYM QP  Y  E Q  + C++LK
Sbjct: 897  ARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEGQEGMVCKLLK 956

Query: 1188 SLYGFK*ASRA*YKKLEEFLSLQGFIKFISDPNLFY 1295
            SLYG K A +  ++K +  L+  GF+   +D  ++Y
Sbjct: 957  SLYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCVYY 992


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  252 bits (643), Expect = 3e-64
 Identities = 151/454 (33%), Positives = 237/454 (52%), Gaps = 24/454 (5%)
 Frame = +3

Query: 3    FQTFIKFCKLVQNEKSYKIGCLRSDGGTEYNSIIFKKICENKGIKRQVIVPYNPQQNGVS 182
            F+TF KF   V+N+   KI  LR+D G E+ S  F   CE  GI+R++  PY P+QNGV+
Sbjct: 548  FETFKKFKAFVENQSGNKIKSLRTDRGGEFLSNDFNLFCEENGIRRELTAPYTPEQNGVA 607

Query: 183  KR*NRTLVDAVRCLLHDANLDKVWWGEALLTANYITNHWPNKSLDMKFPMEVLYRVKSNI 362
            +R NRT+V+  R  L    L   +WGEA+ T  Y  N  P K +    P+E     K  +
Sbjct: 608  ERKNRTVVEMARSSLKAKGLPDYFWGEAVATVVYFLNISPTKDVWNTTPLEAWNGKKPRV 667

Query: 363  SHLMEFGKTYYYLIPKEKRRKLDDKAKKGIFIGYPTRTKGYRLIDMEIRNIIISR----- 527
            SHL  FG   Y L+      KLD+K+ K IF+GY  ++K YRL +     +IISR     
Sbjct: 668  SHLRIFGCIAYALV--NFHSKLDEKSTKCIFVGYSLQSKAYRLYNPISGKVIISRNVVFN 725

Query: 528  ----------------EIKEADIESFENNKNIPKETTXXXXXXXXXXXXMETTIPKGLKI 659
                            ++   D ES  +  N P  ++              T  P    +
Sbjct: 726  EDVSWNFNSGNMMSNIQLLPTDEESAVDFGNSPN-SSPVSSSVSSPIAPSTTVAPDESSV 784

Query: 660  *PLWYKLMIQEAENFVK-GKIIEANICFSIDLEIPKSPTEAIKKQHWKNAMDEEMTNMKN 836
             P+  +   +E +   K    +  +  F++ +  P    EA+++  WKNAM EE+  ++ 
Sbjct: 785  EPIPLRRSTREKKPNPKYSNTVNTSCQFALLVSDPICYEEAVEQSEWKNAMIEEIQAIER 844

Query: 837  KNVWRLEELPEGKKEVGCTWLYTIKLKPYGSLDKYKA*LVVQGFTQKEGIDYKDTFAPIA 1016
             + W L + PEGK  +G  W++  K    GS+ K+KA LV +G++Q++G+D+ +TF+P+A
Sbjct: 845  NSTWELVDAPEGKNVIGLKWVFRTKYNADGSIQKHKARLVAKGYSQQQGVDFDETFSPVA 904

Query: 1017 KMRTIRNIISLATKKGWESHLLDVKNAFLNGDITEEIYMKQPKCY--EDQNNLSCRILKS 1190
            +  T+R +++LA +     +  DVK+AFLNGD+ EE+Y+ QP+ +      N   ++ K+
Sbjct: 905  RFETVRVVLALAAQLHLPVYQFDVKSAFLNGDLEEEVYVSQPQGFMITGNENKVYKLRKA 964

Query: 1191 LYGFK*ASRA*YKKLEEFLSLQGFIKFISDPNLF 1292
            LYG K A RA Y K++ F    GF +  ++P L+
Sbjct: 965  LYGLKQAPRAWYSKIDSFFQGSGFRRSDNEPTLY 998


>emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera]
          Length = 1291

 Score =  247 bits (630), Expect = 9e-63
 Identities = 143/398 (35%), Positives = 224/398 (56%), Gaps = 14/398 (3%)
 Frame = +3

Query: 141  QVIVPYNPQQNGVSKR*NRTLVDAVRCLLHDANLDKVWWGEALLTANYITNHWPNKSLDM 320
            ++  PY+PQQNGVS+R NRT+++  RC+L +  L K+ W EA+ T+ Y+ N  P KS+  
Sbjct: 591  ELTTPYSPQQNGVSERKNRTVMEMARCMLFEKKLPKLLWAEAVNTSVYLLNRLPTKSVQS 650

Query: 321  KFPMEVLYRVKSNISHLMEFGKTYYYLIPKEKRRKLDDKAKKGIFIGYPTRTKGYRLIDM 500
            K P+E    VK ++ HL  FG   Y  +P  KR KLD++A+KG+F+GY   +KGYR+  +
Sbjct: 651  KTPIEAWSGVKPSVKHLKVFGSFCYLHVPSVKRGKLDERAEKGVFVGYAAESKGYRIYSL 710

Query: 501  EIRNIIISREIKEADIESFENNKNIPKETTXXXXXXXXXXXXMETTIPKG---------- 650
                I+ISR++   D  S+ N  ++ K               +E+TI +G          
Sbjct: 711  SRMKIVISRDV-HFDENSYWN-WDLKKVHKCDQTTPSILEPAIESTIIEGPLDVEATSDT 768

Query: 651  --LKI*PLWYKLMIQEAENFVKGKIIEANICFSIDLEIPKSPTEAIKKQHWKNAMDEEMT 824
              LK+ PL        ++ + +  ++ A          P   TEA +   W  AM  E+ 
Sbjct: 769  PVLKMRPL--------SDVYERCNLVHAE---------PTCYTEAARFLEWIEAMKAEID 811

Query: 825  NMKNKNVWRLEELPEGKKEVGCTWLYTIKLKPYGSLDKYKA*LVVQGFTQKEGIDYKDTF 1004
             ++    W+L ELPE K  +G  W++  K    GS+ ++KA LVV+GF Q  G+DY DTF
Sbjct: 812  AIERNGTWKLTELPEAKNAIGVKWVFRTKFNSDGSIFRHKARLVVKGFAQVAGVDYGDTF 871

Query: 1005 APIAKMRTIRNIISLATKKGWESHLLDVKNAFLNGDITEEIYMKQPKCYE--DQNNLSCR 1178
            AP+A+  TIR +++LA ++GW+ + LDVK+AFLNG + EEIY++QP+ +E     +   +
Sbjct: 872  APVARHDTIRLLLALAGQRGWKVYHLDVKSAFLNGILLEEIYVQQPEGFEVIGHEHKVYK 931

Query: 1179 ILKSLYGFK*ASRA*YKKLEEFLSLQGFIKFISDPNLF 1292
            + K+LYG K A RA Y +++  L   GF +  ++  L+
Sbjct: 932  LHKALYGLKQAPRAWYSRIDSHLIQLGFRRSENEATLY 969


>emb|CAN64335.1| hypothetical protein VITISV_001808 [Vitis vinifera]
          Length = 1885

 Score =  241 bits (614), Expect = 6e-61
 Identities = 155/451 (34%), Positives = 238/451 (52%), Gaps = 21/451 (4%)
 Frame = +3

Query: 3    FQTFIKFCKLVQNEKSYKIGCLRSDGGTEYNSIIFKKICENKGIKRQVIVPYNPQQNGVS 182
            F  F KFC  VQNEK + I C+RSD G E+ +  F++ C   GI    + P   QQNGV 
Sbjct: 709  FYEFSKFCNKVQNEKGFSITCIRSDHGREFENFDFEEYCNKYGINHNFLAPRTSQQNGVV 768

Query: 183  KR*NRTLVDAVRCLLHDANLDKVWWGEALLTANYITNHWPNKSLDMKFPMEVLYRVKSNI 362
            +R NRTL +  R +L++ NL K +W EA+ T+ Y+ N    + +  K P E+    K NI
Sbjct: 769  ERKNRTLQEMARTMLNENNLPKYFWAEAINTSCYVLNRILLRPILKKTPYELWKNKKPNI 828

Query: 363  SHLMEFGKTYYYLIPKEKRRKLDDKAKKGIFIGYPTRTKGYRLIDMEIRNIIISREIKEA 542
            S+   FG   + L  K+   K D K+  GIF+GY T +K +R+ +   R +++   I + 
Sbjct: 829  SYFKVFGCKCFILNTKDNLGKFDAKSDVGIFLGYSTSSKAFRVFNK--RTMVVEESIHDW 886

Query: 543  DIESFENNKNIPKETTXXXXXXXXXXXXMETTIPKGLKI*PLWYKLMIQEAE---NFVKG 713
             +  +EN K   K+                  IP+  K   LW+ L++ + +   N  + 
Sbjct: 887  RL-PWENCKLRTKDNKKKV-----------ERIPR--KKNHLWHYLLLNKCKFVINHPQD 932

Query: 714  KIIE------------ANIC----FSIDLEIPKSPTEAIKKQHWKNAMDEEMTNMKNKNV 845
            +II              NIC    F   +E PK+  +AI  ++W  AM +E+   +   V
Sbjct: 933  QIIGNPLSGVRTRSSLRNICNNLAFISQIE-PKNIKDAIVDENWMIAMQKELNQFERSEV 991

Query: 846  WRLEELPEGKKEVGCTWLYTIKLKPYGSLDKYKA*LVVQGFTQKEGIDYKDTFAPIAKMR 1025
            W L   P  +  +G  W++  K+   G + + KA LV QG+ Q+EGIDY++TFAP+A++ 
Sbjct: 992  WELVPRPSNQSVIGTKWVFRNKMDENGIIVRNKARLVAQGYNQEEGIDYEETFAPVARLE 1051

Query: 1026 TIRNIISLATKKGWESHLLDVKNAFLNGDITEEIYMKQPKCYEDQN--NLSCRILKSLYG 1199
             IR +++ A  K +  + +DVK+AFLNG I EEIY++QP  ++  N  N   ++ K+LYG
Sbjct: 1052 AIRMLLAFACFKDFILYQMDVKSAFLNGFINEEIYVEQPPGFQSFNFPNHVFKLKKALYG 1111

Query: 1200 FK*ASRA*YKKLEEFLSLQGFIKFISDPNLF 1292
             K A RA Y++L +FL  + F     D  LF
Sbjct: 1112 LKQAPRAWYERLSKFLLKKSFKMGKIDTTLF 1142


>emb|CAN60373.1| hypothetical protein VITISV_034932 [Vitis vinifera]
          Length = 1264

 Score =  234 bits (596), Expect = 8e-59
 Identities = 139/411 (33%), Positives = 216/411 (52%), Gaps = 42/411 (10%)
 Frame = +3

Query: 162  PQQNGVSKR*NRTLVDAVRCLLHDANLDKVWWGEALLTANYITNHWPNKSLDMKFPMEVL 341
            PQQNG+++R NR L++  R L+   N+ K+ WG+A+LTA Y+ N  P++ L  + P + L
Sbjct: 527  PQQNGIAERKNRHLLEVARSLMFSMNVPKLLWGQAVLTAAYLINRMPSRVLKFQTPCQTL 586

Query: 342  Y------RVKSNISHLMEFGKTYYYLIPKEKRRKLDDKAKKGIFIGYPTRTKGYRLIDME 503
                   R+ S +   + FG + +  I ++ R KLD ++ K IF+GY +  KGY+     
Sbjct: 587  LKSFPTTRLISTVPPKI-FGCSVFVHINQQHRSKLDPRSLKCIFLGYSSNQKGYKCYSPV 645

Query: 504  IRNIIISREIKEADIESFENNKNIPKETTXXXXXXXXXXXXMETTIPKGLKI*P------ 665
             R    S ++   + + +    +I  E +             E+ I     I P      
Sbjct: 646  TRKFYNSMDVTFFETQPYYPKNDIQGENSTQEYQFWDLESFSESPITTENHIPPESFNQP 705

Query: 666  -----LWYKLMIQEAE-----------------------NFVKGKIIEANICFSIDLEIP 761
                 LW K  IQE                         N      ++++I    ++++P
Sbjct: 706  ESIVDLWDKDHIQEETEEGALSQQTHEAEPGPNPSKLPGNNAPDGTVDSDIT---EIQVP 762

Query: 762  KSPTEAIKKQHWKNAMDEEMTNMKNKNVWRLEELPEGKKEVGCTWLYTIKLKPYGSLDKY 941
            ++  EA K   WK A+DEE+  ++    W +  LP GKK VGC W++T+K K  G++D+Y
Sbjct: 763  RNIQEAFKYPKWKAAVDEEVRALEKNGTWEITNLPRGKKPVGCKWIFTVKYKADGNVDRY 822

Query: 942  KA*LVVQGFTQKEGIDYKDTFAPIAKMRTIRNIISLATKKGWESHLLDVKNAFLNGDITE 1121
            KA LV +GFTQ  GIDY++TFAP+AK+ T+R ++SLA    W  H LDVKNAFLNGD+ E
Sbjct: 823  KARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAANLDWSLHQLDVKNAFLNGDLEE 882

Query: 1122 EIYMKQPKCYEDQNNLS--CRILKSLYGFK*ASRA*YKKLEEFLSLQGFIK 1268
            E+YM  P   E  +N +  CR+ KSLYG K + RA +++  + +   GF++
Sbjct: 883  EVYMDIPAGLEMTSNFNKVCRLQKSLYGLKQSPRAWFERFTKVVKGYGFVQ 933


>emb|CAN68682.1| hypothetical protein VITISV_024814 [Vitis vinifera]
          Length = 1248

 Score =  233 bits (594), Expect = 1e-58
 Identities = 139/439 (31%), Positives = 233/439 (53%), Gaps = 15/439 (3%)
 Frame = +3

Query: 21   FCKLVQNEKSYKIGCLRSDGGTEYNSIIFKKICENKGIKRQVIVPYNPQQNGVSKR*NRT 200
            FC +++ +    I   RSD   +Y + +     + +GI  +      PQQNGV++R N  
Sbjct: 525  FCSMIKTQFGVNIKRFRSDNAKDYFNQVLTPYFQREGIIHESSCVNTPQQNGVAERKNGH 584

Query: 201  LVDAVRCLLHDANLDKVWWGEALLTANYITNHWPNKSLDMKFPMEVLYRVKSNI---SHL 371
            L+++ R  +   N+ K +WGEA+LT  ++ N  P++ L  K PM++L     N+   ++L
Sbjct: 585  LLNSTRSFMFQKNVPKSFWGEAVLTTAHLINRLPSRILGFKSPMDILSTFYPNLHTTNNL 644

Query: 372  ME--FGKTYYYLIPKEKRRKLDDKAKKGIFIGYPTRTKGYRLIDMEIRNIIISREIKEAD 545
            +   FG   +  +  + R KLD +A K +F+GY +  KG +        +  S ++++ +
Sbjct: 645  VPRIFGCVAFVHVHNQNRGKLDPRALKCVFLGYSSTQKGKKT------GVPESVQVQDFN 698

Query: 546  IESFENNKNIPKETTXXXXXXXXXXXXMETTIPKGLK------I*PLWYKLMIQEAENFV 707
              S EN   I   +             +   + KG++      + PL + L  ++     
Sbjct: 699  PNS-ENEVTISNPSLQSKSHVNNDDQDLPIVVRKGIRECTNQPLYPLTHFLSFKKFSPSH 757

Query: 708  KGKIIEANICFSIDLEIPKSPTEAIKKQHWKNAMDEEMTNMKNKNVWRLEELPEGKKEVG 887
            +  ++  N      + IP + +EA+  + WK AM+ EM  ++    W L +LP GKK VG
Sbjct: 758  RAFLVSLNT-----ISIPTTVSEALTDEKWKQAMNVEMEALEKNKTWELVKLPTGKKPVG 812

Query: 888  CTWLYTIKLKPYGSLDKYKA*LVVQGFTQKEGIDYKDTFAPIAKMRTIRNIISLATKKGW 1067
            C W+YT+K +  GS+++YKA LV +G+ Q  GIDY++TFAP+AKM T+R ++SL     W
Sbjct: 813  CKWVYTVKYRADGSIERYKARLVAKGYAQTYGIDYQETFAPVAKMNTVRVLLSLTANYNW 872

Query: 1068 ESHLLDVKNAFLNGDITEEIYMKQPKCYEDQNNLS----CRILKSLYGFK*ASRA*YKKL 1235
            +    DVKNAFL+G++ EEIYM+ P  Y+  NNL+    C++ K+LYG K + RA + + 
Sbjct: 873  DLQQFDVKNAFLHGELEEEIYMEVPPGYD--NNLAAHIVCKLKKALYGLKQSPRAWFGRF 930

Query: 1236 EEFLSLQGFIKFISDPNLF 1292
               +   G+ +   D  LF
Sbjct: 931  ARVIITMGYRQSQGDHMLF 949


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score =  227 bits (579), Expect = 7e-57
 Identities = 137/425 (32%), Positives = 216/425 (50%), Gaps = 1/425 (0%)
 Frame = +3

Query: 21   FCKLVQNEKSYKIGCLRSDGGTEYNSIIFKKICENKGIKRQVIVPYNPQQNGVSKR*NRT 200
            F  LV+ +   +I  +RSD GTE+  +  ++   +KGI  +      P QNG  +R +R 
Sbjct: 398  FIALVERQFDTEIKTVRSDNGTEF--LCMREYFLHKGITHETSCVGTPHQNGRVERKHRH 455

Query: 201  LVDAVRCLLHDANLDKVWWGEALLTANYITNHWPNKSLDMKFPMEVLYRVKSNISHLMEF 380
            +++  R L   + L   +WGE +L+A Y+ N  P+  L  K P E+LY+   N SHL  F
Sbjct: 456  ILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPNYSHLRVF 515

Query: 381  GKTYYYLIPKEKRRKLDDKAKKGIFIGYPTRTKGYRLIDMEIRNIIISREIKEADIESFE 560
            G   Y      K  K   ++++ +F+GYP   KG+RL D+E +   +SR++   + E   
Sbjct: 516  GSLCYAHNQNHKGDKFVARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDVIFQETEFPY 575

Query: 561  NNKNIPKETTXXXXXXXXXXXXMETTIPKGLKI*PLWYKLMIQEAENFVKGKIIEANICF 740
            +  +  + T+            ME T          + + M+ +A               
Sbjct: 576  SKMSCNRFTSSHKAFLAAVTAGMEPT---------TYNEAMVDKA--------------- 611

Query: 741  SIDLEIPKSPTEAIKKQHWKNAMDEEMTNMKNKNVWRLEELPEGKKEVGCTWLYTIKLKP 920
                              W+ AM  E+ +++    + +  LP GK+ +G  W+Y IK + 
Sbjct: 612  ------------------WREAMSAEIESLRVNQTFSIVNLPPGKRALGNKWVYKIKYRS 653

Query: 921  YGSLDKYKA*LVVQGFTQKEGIDYKDTFAPIAKMRTIRNIISLATKKGWESHLLDVKNAF 1100
             G++++YKA LVV G  QKEG+DY +TFAP+AKM T+R  + +A  + W  H +DV NAF
Sbjct: 654  DGAIERYKARLVVLGNCQKEGVDYDETFAPVAKMSTVRLFLGVAAARDWHVHQMDVHNAF 713

Query: 1101 LNGDITEEIYMKQPKCYE-DQNNLSCRILKSLYGFK*ASRA*YKKLEEFLSLQGFIKFIS 1277
            L+GD+ EE+YMK P+ ++ D  +  CR+ KSLYG K A R  + KL   L   GF + +S
Sbjct: 714  LHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLS 773

Query: 1278 DPNLF 1292
            D +LF
Sbjct: 774  DYSLF 778


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
            gi|7269049|emb|CAB79159.1| LTR retrotransposon like
            protein [Arabidopsis thaliana]
          Length = 1109

 Score =  225 bits (574), Expect = 3e-56
 Identities = 136/425 (32%), Positives = 215/425 (50%), Gaps = 1/425 (0%)
 Frame = +3

Query: 21   FCKLVQNEKSYKIGCLRSDGGTEYNSIIFKKICENKGIKRQVIVPYNPQQNGVSKR*NRT 200
            F  LV+ +   +I  +RSD GTE+  +  ++   +KGI  +      P QNG  +R +R 
Sbjct: 398  FMALVERQFDTEIKTVRSDNGTEF--LCMREYFLHKGIAHETSCVGTPHQNGRVERKHRH 455

Query: 201  LVDAVRCLLHDANLDKVWWGEALLTANYITNHWPNKSLDMKFPMEVLYRVKSNISHLMEF 380
            +++  R L   + L   +WGE +L+A Y+ N  P+  L  K P E+LY+     SHL  F
Sbjct: 456  ILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPKYSHLRVF 515

Query: 381  GKTYYYLIPKEKRRKLDDKAKKGIFIGYPTRTKGYRLIDMEIRNIIISREIKEADIESFE 560
            G   Y      K  K   ++++ +F+GYP   KG+RL D+E +   +SR++   + E   
Sbjct: 516  GSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDVIFQETEFPY 575

Query: 561  NNKNIPKETTXXXXXXXXXXXXMETTIPKGLKI*PLWYKLMIQEAENFVKGKIIEANICF 740
            +  +  + T+            ME T          + + M+ +A               
Sbjct: 576  SKMSCNRFTSSHKAFLAAVTAGMEPT---------TYNEAMVDKA--------------- 611

Query: 741  SIDLEIPKSPTEAIKKQHWKNAMDEEMTNMKNKNVWRLEELPEGKKEVGCTWLYTIKLKP 920
                              W+ AM  E+ +++    + +  LP GK+ +G  W+Y IK + 
Sbjct: 612  ------------------WREAMSAEIESLRVNQTFSIVNLPPGKRALGNKWVYKIKYRS 653

Query: 921  YGSLDKYKA*LVVQGFTQKEGIDYKDTFAPIAKMRTIRNIISLATKKGWESHLLDVKNAF 1100
             G++++YKA LVV G  QKEG+DY +TFAP+AKM T+R  + +A  + W  H +DV NAF
Sbjct: 654  DGAIERYKARLVVLGNCQKEGVDYDETFAPVAKMSTVRLFLGVAAARDWHVHQMDVHNAF 713

Query: 1101 LNGDITEEIYMKQPKCYE-DQNNLSCRILKSLYGFK*ASRA*YKKLEEFLSLQGFIKFIS 1277
            L+GD+ EE+YMK P+ ++ D  +  CR+ KSLYG K A R  + KL   L   GF + +S
Sbjct: 714  LHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLS 773

Query: 1278 DPNLF 1292
            D +LF
Sbjct: 774  DYSLF 778


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score =  225 bits (573), Expect = 4e-56
 Identities = 145/426 (34%), Positives = 225/426 (52%), Gaps = 6/426 (1%)
 Frame = +3

Query: 3    FQTFIKFCKLVQNEKSYKIGCLRSDGGTEYNSIIFKKICENKGIKRQVIVPYNPQQNGVS 182
            F  F ++  +V+ +   K+  LR+D G E+ S IFK  C+++GI R   VP+ PQQNGV+
Sbjct: 354  FNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIMRHYTVPHTPQQNGVA 413

Query: 183  KR*NRTLVDAVRCLLHDANLDKVWWGEALLTANYITNHWPNKSLDMKFPMEVLYRVKSNI 362
            +R NRT++   RC+L +A L K +W EA+ TA Y+ N  P  ++D K P++V     +N 
Sbjct: 414  ERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIKVWSGSPANY 473

Query: 363  SHLMEFGKTYYYLIPKEKRRKLDDKAKKGIFIGYPTRTKGYRLIDMEIRNIIISREI--K 536
            S L  FG T Y  +      KL+ +  K IF+GYP+  KGY+L   E + ++ISR +   
Sbjct: 474  SDLKVFGCTAYAHV---DNGKLEPRTIKCIFLGYPSGVKGYKLWCPETKKVVISRYVVFH 530

Query: 537  EADIESFENNKNIPKETTXXXXXXXXXXXXMETTIPKGLKI*PLWYKLMIQEAENFVKGK 716
            E+ +   + + NIP E+               +          L  K+  +E  N +K  
Sbjct: 531  ESVMLHDKPSTNIPVESQEKASVQIQILLLFSSLQN------VLLQKISPKEILNLLK-D 583

Query: 717  IIEANICFSIDLEIPKSPTEAIKKQHWKNAMDEEMTNMKNKNVWRLEELPEGKKEVGCTW 896
            I EANI     +    S  E ++K H                 W L +LP+  K + C W
Sbjct: 584  IEEANI-----VAYALSVAEELEKNH----------------TWELVKLPKENKPIRCKW 622

Query: 897  LYTIK--LKPYGSLDKYKA*LVVQGFTQKEGIDYKDTFAPIAKMRTIRNIISLATKKGWE 1070
            ++  K  + P     +YKA LV +G++Q  GID+ D F+P+ K  +IR ++S+     +E
Sbjct: 623  IFKRKEGMSPSDEA-RYKARLVAKGYSQIPGIDFNDIFSPVVKHSSIRTLLSIVAMHDYE 681

Query: 1071 SHLLDVKNAFLNGDITEEIYMKQPKCY--EDQNNLSCRILKSLYGFK*ASRA*YKKLEEF 1244
               +DVK AFL+G++ E+IYM+QP+ +    + NL CR+ KSLYG K + R  YK+ + F
Sbjct: 682  LEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSF 741

Query: 1245 LSLQGF 1262
            +  Q F
Sbjct: 742  MLSQKF 747


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score =  225 bits (573), Expect = 4e-56
 Identities = 145/426 (34%), Positives = 225/426 (52%), Gaps = 6/426 (1%)
 Frame = +3

Query: 3    FQTFIKFCKLVQNEKSYKIGCLRSDGGTEYNSIIFKKICENKGIKRQVIVPYNPQQNGVS 182
            F  F ++  +V+ +   K+  LR+D G E+ S IFK  C+++GI R   VP+ PQQNGV+
Sbjct: 522  FNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIMRHYTVPHTPQQNGVA 581

Query: 183  KR*NRTLVDAVRCLLHDANLDKVWWGEALLTANYITNHWPNKSLDMKFPMEVLYRVKSNI 362
            +R NRT++   RC+L +A L K +W EA+ TA Y+ N  P  ++D K P++V     +N 
Sbjct: 582  ERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIKVWSGSPANY 641

Query: 363  SHLMEFGKTYYYLIPKEKRRKLDDKAKKGIFIGYPTRTKGYRLIDMEIRNIIISREI--K 536
            S L  FG T Y  +      KL+ +  K IF+GYP+  KGY+L   E + ++ISR +   
Sbjct: 642  SDLKVFGCTAYAHV---DNGKLEPRTIKCIFLGYPSGVKGYKLWCPETKKVVISRYVVFH 698

Query: 537  EADIESFENNKNIPKETTXXXXXXXXXXXXMETTIPKGLKI*PLWYKLMIQEAENFVKGK 716
            E+ +   + + NIP E+               +          L  K+  +E  N +K  
Sbjct: 699  ESVMLHDKPSTNIPVESQEKASVQIQILLLFSSLQN------VLLQKISPKEILNLLK-D 751

Query: 717  IIEANICFSIDLEIPKSPTEAIKKQHWKNAMDEEMTNMKNKNVWRLEELPEGKKEVGCTW 896
            I EANI     +    S  E ++K H                 W L +LP+  K + C W
Sbjct: 752  IEEANI-----VAYALSVAEELEKNH----------------TWELVKLPKENKPIRCKW 790

Query: 897  LYTIK--LKPYGSLDKYKA*LVVQGFTQKEGIDYKDTFAPIAKMRTIRNIISLATKKGWE 1070
            ++  K  + P     +YKA LV +G++Q  GID+ D F+P+ K  +IR ++S+     +E
Sbjct: 791  IFKRKEGMSPSDEA-RYKARLVAKGYSQIPGIDFNDIFSPVVKHSSIRTLLSIVAMHDYE 849

Query: 1071 SHLLDVKNAFLNGDITEEIYMKQPKCY--EDQNNLSCRILKSLYGFK*ASRA*YKKLEEF 1244
               +DVK AFL+G++ E+IYM+QP+ +    + NL CR+ KSLYG K + R  YK+ + F
Sbjct: 850  LEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSF 909

Query: 1245 LSLQGF 1262
            +  Q F
Sbjct: 910  MLSQKF 915


>gb|ABF95851.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1075

 Score =  224 bits (571), Expect = 6e-56
 Identities = 145/431 (33%), Positives = 223/431 (51%), Gaps = 11/431 (2%)
 Frame = +3

Query: 3    FQTFIKFCKLVQNEKSYKIGCLRSDGGTEYNSIIFKKICENKGIKRQVIVPYNPQQNGVS 182
            F+ F  F    +N+   KI  LRSD G EY SI F K  +  GI  +   PY+PQ NGV+
Sbjct: 438  FEHFKIFKAEAENQLDLKIKILRSDRGGEYLSIEFSKFHQEHGIIHETTPPYSPQSNGVA 497

Query: 183  KR*NRTLVDAVRCLLHDANLDKVWWGEALLTANYITNHWPNKSLDMKFPMEVLYRVKSNI 362
            +R NRTL + V  +L ++ L    WGEAL TA ++ N  P K  ++  P E+    K N+
Sbjct: 498  ERKNRTLTNLVNAMLSNSGLPNYMWGEALYTACFVLNRVPAKGTEVT-PYELWKGRKPNL 556

Query: 363  SHLMEFGKTYYYLIPKEKRRKLDDKAKKGIFIGYPTRTKGYRLIDMEIRNIIISREIKEA 542
            + L  +G      IP  K+RKL  K    +FIGY   +  YR +            +K  
Sbjct: 557  NFLKVWGCLAKVNIPVVKKRKLGPKTVDCVFIGYAQNSLAYRFL-----------VVKSE 605

Query: 543  DIESFENNKNIPKETTXXXXXXXXXXXXMETTIPKGLKI*PLWYKLMIQEAENFVKGKII 722
              E  EN     ++TT            +++   + + + P    +   ++ N  + K  
Sbjct: 606  TTEVRENTVMESRDTTFFEDTFPLK---VKSPSSEPISVEPR-ISISSDDSLNLRRSKRS 661

Query: 723  EANICFSIDL------EIPKSPTEAI---KKQHWKNAMDEEMTNMKNKNVWRLEELPEGK 875
                 F  D       ++P + +EA    +  +WK A+  EM ++ +   W +  LP+G 
Sbjct: 662  RTEKTFGDDFIIYLVDDVPSTLSEAFASAEAAYWKEAVQSEMDSILSNGTWEITHLPQGY 721

Query: 876  KEVGCTWLYTIKLKPYGSLDKYKA*LVVQGFTQKEGIDYKDTFAPIAKMRTIRNIISLAT 1055
            + +G   +   KLKP G++DK+KA LV +G+TQ++G DY DTF+P+A M TIR +++LA 
Sbjct: 722  RAIGYRAIGCKKLKPDGTIDKFKARLVAKGYTQRQGEDYFDTFSPVAHMPTIRALVALAA 781

Query: 1056 KKGWESHLLDVKNAFLNGDITEEIYMKQPKCY--EDQNNLSCRILKSLYGFK*ASRA*YK 1229
              G++ H +DVK AFLNG++ EEIYM+QP  +    Q +  C++ KSLYG K A    ++
Sbjct: 782  AYGYKIHQMDVKTAFLNGELEEEIYMQQPDGFVIPGQEDKVCKLEKSLYGLKQAPMQWHE 841

Query: 1230 KLEEFLSLQGF 1262
            K ++ L   GF
Sbjct: 842  KFDKTLISAGF 852


>dbj|BAA96887.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1140

 Score =  224 bits (570), Expect = 8e-56
 Identities = 153/450 (34%), Positives = 227/450 (50%), Gaps = 25/450 (5%)
 Frame = +3

Query: 6    QTFIKFCK---LVQNEKSYKIGCLRSDGGTEYNSIIFKKICENKGIKRQVIVPYNPQQNG 176
            +TF KFC+   LV+N+ + KI  LR+D G E+ ++ F + C+  GI+R     Y PQQNG
Sbjct: 517  ETFDKFCEWKELVENQVNKKIKVLRTDNGLEFCNLKFDEYCKKNGIERHRTCTYTPQQNG 576

Query: 177  VSKR*NRTLVDAVRCLLHDANLDKVWWGEALLTANYITNHWPNKSLDMKFPMEVLYRVKS 356
            V++R NRTL++ VRCLL+++ LD+ +W EA  T  Y+ N  P   +D   P E+    K 
Sbjct: 577  VAERMNRTLMEKVRCLLNESGLDESFWAEAASTTAYLVNRSPASVVDHNVPEELWLGKKP 636

Query: 357  NISHLMEFGKTYYYLIPKEKRRKLDDKAKKGIFIGYPTRTKGYRLIDMEIRNIIISREI- 533
               HL  FG   Y     + + KL  +A KG+F+GYP   KGY++  ++    +ISR + 
Sbjct: 637  GYKHLRRFGSIAYV---HQDQGKLKPRALKGVFLGYPQGVKGYKVWLLDEEKCVISRNVV 693

Query: 534  -----------KEADIESFENNKNIPKETTXXXXXXXXXXXXMETTIPKGLKI*PLWYKL 680
                        E+D E  +    + KETT               T+   +K        
Sbjct: 694  FDEDSVYKSLLPESDKEQIDG--KLSKETT--------------VTVNDSVK-------- 729

Query: 681  MIQEAENFVKGKIIEANICFSIDLEI----PKSPTEAIKKQHWKNAMDEEMTNMKNKNVW 848
              ++ E+   G  IE  I  S D E+      SP + +  ++++ A D            
Sbjct: 730  --EKGESSASGGAIE-EISDSSDSEVAATEEDSPIQTVNLENYQLARDR----------- 775

Query: 849  RLEELPEGKKE---VGCTWLYTIKLKPYGSLDK-YKA*LVVQGFTQKEGIDYKDTFAPIA 1016
                 PEG K+   + C WLY IK    G   K YKA LV +GFTQK+GIDY++ FAP+ 
Sbjct: 776  -----PEGPKDQHVISCRWLYKIKPGILGVESKRYKARLVARGFTQKKGIDYEEVFAPVV 830

Query: 1017 KMRTIRNIISLATKKGWESHLLDVKNAFLNGDITEEIYMKQPKCYEDQNNLS--CRILKS 1190
            K  +IR ++S+      E   +DVK A L+G++ + +YM+QP+ +E   N    C + KS
Sbjct: 831  KHISIRILMSIVVADDMELEQMDVKTALLHGELDQVLYMEQPEGFEADPNKDQVCLLKKS 890

Query: 1191 LYGFK*ASRA*YKKLEEFLSLQGFIKFISD 1280
            LYG K A R   KK   F+  QGF + + D
Sbjct: 891  LYGLKQAPRQWNKKFNAFMMDQGFTRSLHD 920


>gb|ABA97586.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 786

 Score =  218 bits (556), Expect = 3e-54
 Identities = 153/440 (34%), Positives = 222/440 (50%), Gaps = 19/440 (4%)
 Frame = +3

Query: 33   VQNEKSYKIGCLRSDGGTEYNSIIFKKICENKGIKRQVIVPYNPQQNGVSKR*NRTLVDA 212
            V+N+   KI  LRSD G EY S  F   CE  GI  +   PY+PQ NGV++R N TL + 
Sbjct: 94   VENQLERKIKRLRSDRGGEYFSNEFTSFCEEYGIIHERTPPYSPQSNGVAERKNHTLTEM 153

Query: 213  VRCLLHDANLDKVWWGEALLTANYITNHWPNKSLDMKFPMEVLYRVKSNIS--HLMEFGK 386
            V  +L  A L K WWG+A+LTA Y+ N  P K  ++  P +   R K N+S  H+  FG+
Sbjct: 154  VNAMLDTAGLSKEWWGDAILTACYVLNRIPTKHKEVT-PFDEWERKKLNLSPAHMGLFGQ 212

Query: 387  TYYYLIPKEKRRKLDDKAKKGIFIGYPTRTKGYRLIDMEIRNIIISREIKEADIESFENN 566
             Y +LI                  G P         DM +  I  SR     D   FEN 
Sbjct: 213  GYRFLIVNS---------------GVP---------DMRVGTITESR-----DATFFENE 243

Query: 567  ---KNIPKETTXXXXXXXXXXXXMETTIPKGLKI*PLWYKLMIQEAENFV---KGKIIEA 728
               KN P  ++            +E  I + L+  P        E +N V   K K    
Sbjct: 244  FPMKNAPSTSSQELILSPEHFVPIEH-IDQTLEENP--------EEDNIVATRKSKRQRT 294

Query: 729  NICFSIDL------EIPKSPTEAIKK---QHWKNAMDEEMTNMKNKNVWRLEELPEGKKE 881
             + F  D       + P++  EA       +WK A+  EM ++ +   W++ E   G K 
Sbjct: 295  AMSFGDDYIVYLVDDTPRTIEEAYSSPNADYWKEAVRSEMDSIMSNGTWQVVERLYGCKP 354

Query: 882  VGCTWLYTIKLKPYGSLDKYKA*LVVQGFTQKEGIDYKDTFAPIAKMRTIRNIISLATKK 1061
            VGC W++  KL+  G+++KYKA LV +G+TQKEG+D+ DT++P+A + TI  +++LA   
Sbjct: 355  VGCKWVFKKKLRLDGTIEKYKARLVAKGYTQKEGVDFFDTYSPVALLTTIPVLLTLAASH 414

Query: 1062 GWESHLLDVKNAFLNGDITEEIYMKQPKCY--EDQNNLSCRILKSLYGFK*ASRA*YKKL 1235
            G   H +DVK  FLNG++ EEIYM QP  Y  E +  + C++LKSLYG K A +  ++K 
Sbjct: 415  GLLVHQMDVKTTFLNGELEEEIYMDQPDGYVLEGREGMVCKLLKSLYGLKQAPKQWHEKF 474

Query: 1236 EEFLSLQGFIKFISDPNLFY 1295
            +  L+  GF+   +D  ++Y
Sbjct: 475  DNTLTSAGFVVNEADKCVYY 494


>gb|EFA06256.1| hypothetical protein TcasGA2_TC009115 [Tribolium castaneum]
          Length = 1267

 Score =  218 bits (556), Expect = 3e-54
 Identities = 139/441 (31%), Positives = 213/441 (48%), Gaps = 15/441 (3%)
 Frame = +3

Query: 3    FQTFIKFCKLVQNEKSYKIGCLRSDGGTEYNSIIFKKICENKGIKRQVIVPYNPQQNGVS 182
            F+ F   CK   N+  + I  LR+D G EY +  F K  +++GI  +   PY  +QNG +
Sbjct: 512  FKQFYYMCK---NKFGHPIKTLRADNGGEYVNQEFHKFLKDRGIILETCAPYCHEQNGKA 568

Query: 183  KR*NRTLVDAVRCLLHDANLDKVWWGEALLTANYITNHWPNKSLDMKFPMEVLYRVKSNI 362
            +R NRTLV++ R ++   NL    W EA+ TA YI N   N       P E+      ++
Sbjct: 569  ERENRTLVESARSMIFTKNLPLYLWAEAVNTAAYILNRTTNSINQEVTPYELWTNKTPDL 628

Query: 363  SHLMEFGKTYYYLIPKEKRRKLDDKAKKGIFIGYPTRTKGYRLIDMEIRNIIISREIKEA 542
             H+  FG   Y  +P   R+KL+ K+KK I +GY   +  YRL D   R I I+R +   
Sbjct: 629  KHIRIFGSDAYMHVPDNLRKKLEPKSKKLILVGYDNDSTNYRLFDRATRKIKIARNVTFG 688

Query: 543  DI---------------ESFENNKNIPKETTXXXXXXXXXXXXMETTIPKGLKI*PLWYK 677
            +                E  ++ +N+                  ET   +G  + P    
Sbjct: 689  EDNELTLPRANKIVITDEIHDDERNLEHNNQNDQTKEPEEEPVPETEDRRGYNLRPREIL 748

Query: 678  LMIQEAENFVKGKIIEANICFSIDLEIPKSPTEAIKKQHWKNAMDEEMTNMKNKNVWRLE 857
                  +++V   I+E +   + D  I  S +E      W+NA+ EE+  +K  + W L 
Sbjct: 749  KTPNNLDDYVIN-IVEGDTPNTYDEAITSSESE-----EWRNAIQEELDALKKNDTWNLV 802

Query: 858  ELPEGKKEVGCTWLYTIKLKPYGSLDKYKA*LVVQGFTQKEGIDYKDTFAPIAKMRTIRN 1037
             LP  KK +G  W++ IK  P     +YKA L  +GF Q EG+DY +T+AP  +  TIR 
Sbjct: 803  NLPVDKKAIGSKWVFKIKRSPNNKNIRYKARLCAKGFAQTEGVDYNETYAPTTRYDTIRI 862

Query: 1038 IISLATKKGWESHLLDVKNAFLNGDITEEIYMKQPKCYEDQNNLSCRILKSLYGFK*ASR 1217
            ++++A ++ ++    DVK AFL+G++ E IYM+ P       N   ++ KSLYG K + R
Sbjct: 863  LLAVAARENYQMIQFDVKTAFLHGELEENIYMQPPPGLSVPPNSVLKLKKSLYGLKQSPR 922

Query: 1218 A*YKKLEEFLSLQGFIKFISD 1280
               +K  EFL L G  +  SD
Sbjct: 923  CWNRKFNEFLELFGLKQCESD 943