BLASTX nr result
ID: Ephedra25_contig00017081
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00017081
(743 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001755196.1| predicted protein [Physcomitrella patens] gi... 191 2e-46
ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|22354904... 187 2e-45
gb|EXC06808.1| Putative mediator of RNA polymerase II transcript... 187 3e-45
ref|XP_002993355.1| hypothetical protein SELMODRAFT_431456 [Sela... 187 3e-45
ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263... 187 4e-45
ref|XP_002972741.1| hypothetical protein SELMODRAFT_441953 [Sela... 186 5e-45
gb|EOX95959.1| Mediator of RNA polymerase II transcription subun... 186 7e-45
gb|EOX95958.1| Mediator of RNA polymerase II transcription subun... 186 7e-45
ref|XP_006445035.1| hypothetical protein CICLE_v10018441mg [Citr... 186 9e-45
ref|XP_006445033.1| hypothetical protein CICLE_v10018441mg [Citr... 186 9e-45
ref|XP_003623963.1| Mediator of RNA polymerase II transcription ... 181 2e-43
gb|EOX95957.1| Mediator of RNA polymerase II transcription subun... 181 3e-43
ref|XP_006576321.1| PREDICTED: mediator of RNA polymerase II tra... 180 5e-43
ref|XP_001776860.1| predicted protein [Physcomitrella patens] gi... 180 5e-43
ref|XP_002302587.2| CRYPTIC PRECOCIOUS family protein [Populus t... 179 7e-43
ref|XP_004306783.1| PREDICTED: mediator of RNA polymerase II tra... 178 1e-42
ref|XP_006827602.1| hypothetical protein AMTR_s00009p00238900 [A... 178 2e-42
ref|XP_004229878.1| PREDICTED: mediator of RNA polymerase II tra... 177 4e-42
ref|XP_006339570.1| PREDICTED: mediator of RNA polymerase II tra... 176 6e-42
ref|XP_002334938.1| predicted protein [Populus trichocarpa] 176 7e-42
>ref|XP_001755196.1| predicted protein [Physcomitrella patens]
gi|162693789|gb|EDQ80140.1| predicted protein
[Physcomitrella patens]
Length = 2111
Score = 191 bits (486), Expect = 2e-46
Identities = 101/247 (40%), Positives = 156/247 (63%), Gaps = 1/247 (0%)
Frame = -3
Query: 741 QLQEKESLDALEMLLPVLFEFVDTIILSQSHVRTFVDAIIQWLRLLSPSGNVPASKDNAR 562
QLQEKES++ALE+LLP+L E VD I +SQ+H R V+ +QWLR L P G+VP+ DN+R
Sbjct: 256 QLQEKESVEALELLLPILLELVDGISMSQTHSRMLVELCLQWLRKLYPLGHVPSIGDNSR 315
Query: 561 EAYNVIFLSEILRYLIIVVPDTFVSLDCFPLPSCVCLLPPDNCLYPLTFYGDSKGLSADL 382
L ++L+YL++V+PDTFV+LDCFPLP CV L G S+ + +
Sbjct: 316 NNRVADTLVKLLQYLVLVIPDTFVALDCFPLPQCVSL-------------GGSESSAIES 362
Query: 381 NISKQESADSLVERKISDRDISIANTIVSIQKRASNLAKSVCPGILRNNQGKVVQSLDRA 202
+ + +S + S ++ + ++ IQKR ++LA +V P +LRNN+GK+VQ+LD+A
Sbjct: 363 SSNDLGRVNSGKRKTYS--EVGVVESVDLIQKRTASLASAVSPTLLRNNEGKIVQALDKA 420
Query: 201 LALGDVKSAYHCVFEEVF-TGESMPDEWISDTSPCIRSSLRFMNTLESAEIYAVFFLCEW 25
L GD+ AY V+++ F + +++P +W +D + R++ + +E+Y V FLCEW
Sbjct: 421 LEKGDIAGAYRSVYDDEFCSSDNLPADWRADVTS--RTAFNLSGPVNPSELYPVRFLCEW 478
Query: 24 ATCCFRN 4
A C FR+
Sbjct: 479 AVCDFRD 485
>ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|223549043|gb|EEF50532.1| CRP,
putative [Ricinus communis]
Length = 2264
Score = 187 bits (476), Expect = 2e-45
Identities = 102/251 (40%), Positives = 156/251 (62%), Gaps = 5/251 (1%)
Frame = -3
Query: 741 QLQEKESLDALEMLLPVLFEFVDTIILSQSHVRTFVDAIIQWLRLLSPSGNVPASKDNAR 562
QLQEK+ L+ L++LLP+++ +D+++LSQ++VRT + ++R SP G+ DN+R
Sbjct: 340 QLQEKDLLEILQLLLPIIYGVLDSVVLSQTYVRTLAGIAVHYIREPSPGGSDLV--DNSR 397
Query: 561 EAYNVIFLSEILRYLIIVVPDTFVSLDCFPLPSCVCLLPPDNCLYPLTFYGDSKGLSADL 382
AY L E+LRYLI+ VPDTFV++DCFPLP V ++ ++ S +
Sbjct: 398 RAYTTSALIEMLRYLILAVPDTFVAVDCFPLPPSVMSYAVNDGVFV-------SRASEEA 450
Query: 381 NISKQESADSLVERKISDRD-----ISIANTIVSIQKRASNLAKSVCPGILRNNQGKVVQ 217
+K SA + + D S ++SIQKR NLAK+ CPG L ++ K VQ
Sbjct: 451 RKTKDNSAGVVGVFRSKGLDAQYQSFSFNQVVLSIQKREDNLAKAACPGYLVHSAAKAVQ 510
Query: 216 SLDRALALGDVKSAYHCVFEEVFTGESMPDEWISDTSPCIRSSLRFMNTLESAEIYAVFF 37
+LD+AL LGD+K AY+ +FE F ++ WI + SPC+RSSL++M +++ + + +VFF
Sbjct: 511 ALDKALILGDIKEAYNFLFEN-FCDGAVDGGWIEEVSPCLRSSLKWMGSVDLSFVCSVFF 569
Query: 36 LCEWATCCFRN 4
LCEWATC +R+
Sbjct: 570 LCEWATCDYRD 580
>gb|EXC06808.1| Putative mediator of RNA polymerase II transcription subunit 12
[Morus notabilis]
Length = 2274
Score = 187 bits (475), Expect = 3e-45
Identities = 103/247 (41%), Positives = 161/247 (65%), Gaps = 1/247 (0%)
Frame = -3
Query: 741 QLQEKESLDALEMLLPVLFEFVDTIILSQSHVRTFVDAIIQWLRLLSPSGNVPASKDNAR 562
QLQ+KESL+ +++LLP+++ ++T++LSQ++VR+ V ++++R SP G+ DN+R
Sbjct: 339 QLQDKESLEIVQLLLPIIYGVLETVVLSQTYVRSLVGIAVRFIREPSPGGSDLV--DNSR 396
Query: 561 EAYNVIFLSEILRYLIIVVPDTFVSLDCFPLPSCVCL-LPPDNCLYPLTFYGDSKGLSAD 385
+AY L E+LRYLI+ VPDTFV+LDCFPLPSCV + D L +F K
Sbjct: 397 KAYTTSALVEMLRYLIVAVPDTFVALDCFPLPSCVVSHVVADGSLSKSSFEDVRKIKIGS 456
Query: 384 LNISKQESADSLVERKISDRDISIANTIVSIQKRASNLAKSVCPGILRNNQGKVVQSLDR 205
IS + L + +++ + SIQKRA +LAK+ PG ++ KVV++LDR
Sbjct: 457 SEISVPFRSKGL---DAQYQSLALDYVVSSIQKRADSLAKAARPGYPGHSVAKVVEALDR 513
Query: 204 ALALGDVKSAYHCVFEEVFTGESMPDEWISDTSPCIRSSLRFMNTLESAEIYAVFFLCEW 25
+ LGDV+ AY +FE++ G ++ + WI++ SPC+RSSL+++ T+ + + +VF LCEW
Sbjct: 514 SRVLGDVRGAYTFLFEDLCEG-AVNEHWIAEVSPCLRSSLKWIGTVSLSLVCSVFLLCEW 572
Query: 24 ATCCFRN 4
ATC FR+
Sbjct: 573 ATCDFRD 579
>ref|XP_002993355.1| hypothetical protein SELMODRAFT_431456 [Selaginella moellendorffii]
gi|300138786|gb|EFJ05540.1| hypothetical protein
SELMODRAFT_431456 [Selaginella moellendorffii]
Length = 2096
Score = 187 bits (475), Expect = 3e-45
Identities = 107/249 (42%), Positives = 151/249 (60%), Gaps = 3/249 (1%)
Frame = -3
Query: 741 QLQEKESLDALEMLLPVLFEFVDTIILSQSHVRTFVDAIIQWLRLLSPSGNVPASKDNAR 562
Q+QEKESLD LE+LLPVL EF+D++ LSQ HVR VD WLR L S +P+ ++ +
Sbjct: 323 QIQEKESLDGLELLLPVLLEFMDSLSLSQVHVRMLVDICQHWLRQLGVSNVLPSPEEQPQ 382
Query: 561 EAYNVIFLSEILRYLIIVVPDTFVSLDCFPLPSCVCLLPPDNCLYPLTFYGDSKGLSADL 382
+ V+ EILRYL++ VPDTFV+ DCFPL CV L + GD K
Sbjct: 383 QYRIVVTFVEILRYLLVAVPDTFVAFDCFPLLPCVTTLEG----MEIVKDGDPK------ 432
Query: 381 NISKQESADSLVERKISDRDISIANTIVSIQKRASNLAKSVCPGILRNNQGKVVQSLDRA 202
+ + R++ I + SIQKRAS+L K+V PG+LRNN GKV+Q+LD++
Sbjct: 433 --ADTTKGNGRPGNLCPYREVYIMEVVDSIQKRASSLTKAVNPGVLRNNDGKVIQALDKS 490
Query: 201 LALGDVKSAYHCVFEEVFTG-ESMPDEWISDTS--PCIRSSLRFMNTLESAEIYAVFFLC 31
LA GD+ SA+ VF+ F+G + +P EW + +S P + L N + ++++AV +LC
Sbjct: 491 LAAGDLLSAFQAVFDSDFSGYDQLPGEWKTSSSNLPFLSGML---NNVNLSDLFAVRYLC 547
Query: 30 EWATCCFRN 4
EWA C FR+
Sbjct: 548 EWAVCDFRD 556
>ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263628 [Vitis vinifera]
Length = 2272
Score = 187 bits (474), Expect = 4e-45
Identities = 100/249 (40%), Positives = 162/249 (65%), Gaps = 3/249 (1%)
Frame = -3
Query: 741 QLQEKESLDALEMLLPVLFEFVDTIILSQSHVRTFVDAIIQWLRLLSPSGNVPASKDNAR 562
QLQ+KE L+ L++LLP+++ ++T++LSQ++VRT V +++++ SP G+ DN+R
Sbjct: 338 QLQDKELLEILQLLLPIIYGVIETVVLSQTYVRTLVGVAVRFIKEPSPGGSDLV--DNSR 395
Query: 561 EAYNVIFLSEILRYLIIVVPDTFVSLDCFPLPSCVCLLPPDNCLYPLTFYGDSKGLSADL 382
AY L E+LR+LI+ VPDTFV+LDCFPLP CV ++ + D+ +
Sbjct: 396 RAYTSSALVEMLRFLILAVPDTFVALDCFPLPPCVVSHVANDGSFLTKVSEDTIKIK--- 452
Query: 381 NISKQESADSLVERKISDRD---ISIANTIVSIQKRASNLAKSVCPGILRNNQGKVVQSL 211
++ +++ K+ D +S + + SIQKRA NLAK+ PG +++ K VQ+L
Sbjct: 453 --NRPAEVPTVLRDKVLDGQYPSLSFDHIVSSIQKRADNLAKAASPGYPCHSEAKAVQAL 510
Query: 210 DRALALGDVKSAYHCVFEEVFTGESMPDEWISDTSPCIRSSLRFMNTLESAEIYAVFFLC 31
D+AL GDV+ AY +F++ G ++ + WI++ SPC+RSSL+++ T+ S+ + +VFFLC
Sbjct: 511 DKALVDGDVRGAYKFLFDDHCDG-AVNEGWIAEVSPCLRSSLKWIGTVSSSLVCSVFFLC 569
Query: 30 EWATCCFRN 4
EWATC FR+
Sbjct: 570 EWATCDFRD 578
>ref|XP_002972741.1| hypothetical protein SELMODRAFT_441953 [Selaginella moellendorffii]
gi|300159342|gb|EFJ25962.1| hypothetical protein
SELMODRAFT_441953 [Selaginella moellendorffii]
Length = 2096
Score = 186 bits (473), Expect = 5e-45
Identities = 106/249 (42%), Positives = 151/249 (60%), Gaps = 3/249 (1%)
Frame = -3
Query: 741 QLQEKESLDALEMLLPVLFEFVDTIILSQSHVRTFVDAIIQWLRLLSPSGNVPASKDNAR 562
Q+QEKESLD LE+LLPVL EF+D++ LSQ HVR VD WLR L S +P+ ++ +
Sbjct: 323 QIQEKESLDGLELLLPVLLEFMDSLSLSQVHVRMLVDICQHWLRQLGVSNVLPSPEEQPQ 382
Query: 561 EAYNVIFLSEILRYLIIVVPDTFVSLDCFPLPSCVCLLPPDNCLYPLTFYGDSKGLSADL 382
+ V+ EI+RYL++ VPDTFV+ DCFPL CV L + GD K
Sbjct: 383 QYRIVVTFVEIMRYLLVAVPDTFVAFDCFPLLPCVTTLEG----MEIVKDGDPK------ 432
Query: 381 NISKQESADSLVERKISDRDISIANTIVSIQKRASNLAKSVCPGILRNNQGKVVQSLDRA 202
+ + R++ I + SIQKRAS+L K+V PG+LRNN GKV+Q+LD++
Sbjct: 433 --ADTTKGNGRPGNLCPYREVYIMEVVDSIQKRASSLTKAVNPGVLRNNDGKVIQALDKS 490
Query: 201 LALGDVKSAYHCVFEEVFTG-ESMPDEWISDTS--PCIRSSLRFMNTLESAEIYAVFFLC 31
LA GD+ SA+ VF+ F+G + +P EW + +S P + L N + ++++AV +LC
Sbjct: 491 LAAGDLLSAFQAVFDSDFSGYDQLPGEWKTSSSNLPFLSGML---NNVNLSDLFAVRYLC 547
Query: 30 EWATCCFRN 4
EWA C FR+
Sbjct: 548 EWAVCDFRD 556
>gb|EOX95959.1| Mediator of RNA polymerase II transcription subunit 12 isoform 3
[Theobroma cacao]
Length = 2257
Score = 186 bits (472), Expect = 7e-45
Identities = 108/250 (43%), Positives = 153/250 (61%), Gaps = 4/250 (1%)
Frame = -3
Query: 741 QLQEKESLDALEMLLPVLFEFVDTIILSQSHVRTFVDAIIQWLRLLSPSGNVPASKDNAR 562
QLQEKE + L++LLP++F ++TIIL Q++VR V I+++R SP G+ DN+R
Sbjct: 338 QLQEKELFEILQLLLPIIFGVLETIILCQTYVRNLVGIAIRFIREPSPGGSDLV--DNSR 395
Query: 561 EAYNVIFLSEILRYLIIVVPDTFVSLDCFPLPSCVCLLPPDNCLYPLTFYGDSKGLSADL 382
AY + L E+LRYLI VPDTFV+LDCFPLP+CV + L G S D
Sbjct: 396 RAYTISALVEMLRYLIQAVPDTFVALDCFPLPTCV-------VSHALNDGGFLSKSSDDA 448
Query: 381 NISKQESADSLVER----KISDRDISIANTIVSIQKRASNLAKSVCPGILRNNQGKVVQS 214
K SAD+ V R + +S + + +IQKRA NLAK G + K VQ+
Sbjct: 449 GKIKHNSADAYVLRGKGFDSQYQSLSFDHVVSTIQKRADNLAKGTSAGYPSQSVAKAVQT 508
Query: 213 LDRALALGDVKSAYHCVFEEVFTGESMPDEWISDTSPCIRSSLRFMNTLESAEIYAVFFL 34
LD+AL GD+ AY +FE + G ++ + W+++ SPC+RSSL+++ T+ + I +VFFL
Sbjct: 509 LDKALLQGDLMEAYKHIFENLCDG-AVREGWVAEVSPCLRSSLKWIQTVNLSLICSVFFL 567
Query: 33 CEWATCCFRN 4
CEWATC FR+
Sbjct: 568 CEWATCDFRD 577
>gb|EOX95958.1| Mediator of RNA polymerase II transcription subunit 12 isoform 2
[Theobroma cacao]
Length = 2237
Score = 186 bits (472), Expect = 7e-45
Identities = 108/250 (43%), Positives = 153/250 (61%), Gaps = 4/250 (1%)
Frame = -3
Query: 741 QLQEKESLDALEMLLPVLFEFVDTIILSQSHVRTFVDAIIQWLRLLSPSGNVPASKDNAR 562
QLQEKE + L++LLP++F ++TIIL Q++VR V I+++R SP G+ DN+R
Sbjct: 338 QLQEKELFEILQLLLPIIFGVLETIILCQTYVRNLVGIAIRFIREPSPGGSDLV--DNSR 395
Query: 561 EAYNVIFLSEILRYLIIVVPDTFVSLDCFPLPSCVCLLPPDNCLYPLTFYGDSKGLSADL 382
AY + L E+LRYLI VPDTFV+LDCFPLP+CV + L G S D
Sbjct: 396 RAYTISALVEMLRYLIQAVPDTFVALDCFPLPTCV-------VSHALNDGGFLSKSSDDA 448
Query: 381 NISKQESADSLVER----KISDRDISIANTIVSIQKRASNLAKSVCPGILRNNQGKVVQS 214
K SAD+ V R + +S + + +IQKRA NLAK G + K VQ+
Sbjct: 449 GKIKHNSADAYVLRGKGFDSQYQSLSFDHVVSTIQKRADNLAKGTSAGYPSQSVAKAVQT 508
Query: 213 LDRALALGDVKSAYHCVFEEVFTGESMPDEWISDTSPCIRSSLRFMNTLESAEIYAVFFL 34
LD+AL GD+ AY +FE + G ++ + W+++ SPC+RSSL+++ T+ + I +VFFL
Sbjct: 509 LDKALLQGDLMEAYKHIFENLCDG-AVREGWVAEVSPCLRSSLKWIQTVNLSLICSVFFL 567
Query: 33 CEWATCCFRN 4
CEWATC FR+
Sbjct: 568 CEWATCDFRD 577
>ref|XP_006445035.1| hypothetical protein CICLE_v10018441mg [Citrus clementina]
gi|567905096|ref|XP_006445036.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|567905098|ref|XP_006445037.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|568876055|ref|XP_006491101.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 12-like isoform
X1 [Citrus sinensis] gi|568876057|ref|XP_006491102.1|
PREDICTED: mediator of RNA polymerase II transcription
subunit 12-like isoform X2 [Citrus sinensis]
gi|557547297|gb|ESR58275.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|557547298|gb|ESR58276.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|557547299|gb|ESR58277.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
Length = 2277
Score = 186 bits (471), Expect = 9e-45
Identities = 102/251 (40%), Positives = 161/251 (64%), Gaps = 5/251 (1%)
Frame = -3
Query: 741 QLQEKESLDALEMLLPVLFEFVDTIILSQSHVRTFVDAIIQWLRLLSPSGNVPASKDNAR 562
QL++KE L+ L+++LP+++ ++T++ SQ++VR+ V ++R SP G+ DN+R
Sbjct: 338 QLKDKELLEILQLVLPIIYGVLETVVSSQTYVRSLVGIATHFIREPSPGGSDLV--DNSR 395
Query: 561 EAYNVIFLSEILRYLIIVVPDTFVSLDCFPLPSCVCLLPPDNCLYPLTFYGDSKGLSADL 382
AY + L+E+LRYLI+ VPDTFV+LDCFPLPSCV ++ + SK S D+
Sbjct: 396 RAYTISALAEMLRYLILAVPDTFVALDCFPLPSCVVSYAANDGNFV------SKA-SEDV 448
Query: 381 NISKQESADSL--VERKISD---RDISIANTIVSIQKRASNLAKSVCPGILRNNQGKVVQ 217
K S D++ K D + +S N I +IQ+RA NLAK PG ++ K VQ
Sbjct: 449 GKMKNYSTDAICVFRGKAVDAQYQSLSFDNVISAIQRRADNLAKDASPGYPGHSVAKAVQ 508
Query: 216 SLDRALALGDVKSAYHCVFEEVFTGESMPDEWISDTSPCIRSSLRFMNTLESAEIYAVFF 37
+LD+AL GD++ AY +FE++ ++ + WI++ SPC+RSSL+++ T+ + + +VFF
Sbjct: 509 ALDKALLQGDIREAYKHLFEDL-CDAALDESWIAEVSPCLRSSLKWIGTVSLSSVCSVFF 567
Query: 36 LCEWATCCFRN 4
+CEWATC FR+
Sbjct: 568 ICEWATCDFRD 578
>ref|XP_006445033.1| hypothetical protein CICLE_v10018441mg [Citrus clementina]
gi|567905092|ref|XP_006445034.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|567905100|ref|XP_006445038.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
gi|568876059|ref|XP_006491103.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 12-like isoform
X3 [Citrus sinensis] gi|557547295|gb|ESR58273.1|
hypothetical protein CICLE_v10018441mg [Citrus
clementina] gi|557547296|gb|ESR58274.1| hypothetical
protein CICLE_v10018441mg [Citrus clementina]
gi|557547300|gb|ESR58278.1| hypothetical protein
CICLE_v10018441mg [Citrus clementina]
Length = 2239
Score = 186 bits (471), Expect = 9e-45
Identities = 102/251 (40%), Positives = 161/251 (64%), Gaps = 5/251 (1%)
Frame = -3
Query: 741 QLQEKESLDALEMLLPVLFEFVDTIILSQSHVRTFVDAIIQWLRLLSPSGNVPASKDNAR 562
QL++KE L+ L+++LP+++ ++T++ SQ++VR+ V ++R SP G+ DN+R
Sbjct: 300 QLKDKELLEILQLVLPIIYGVLETVVSSQTYVRSLVGIATHFIREPSPGGSDLV--DNSR 357
Query: 561 EAYNVIFLSEILRYLIIVVPDTFVSLDCFPLPSCVCLLPPDNCLYPLTFYGDSKGLSADL 382
AY + L+E+LRYLI+ VPDTFV+LDCFPLPSCV ++ + SK S D+
Sbjct: 358 RAYTISALAEMLRYLILAVPDTFVALDCFPLPSCVVSYAANDGNFV------SKA-SEDV 410
Query: 381 NISKQESADSL--VERKISD---RDISIANTIVSIQKRASNLAKSVCPGILRNNQGKVVQ 217
K S D++ K D + +S N I +IQ+RA NLAK PG ++ K VQ
Sbjct: 411 GKMKNYSTDAICVFRGKAVDAQYQSLSFDNVISAIQRRADNLAKDASPGYPGHSVAKAVQ 470
Query: 216 SLDRALALGDVKSAYHCVFEEVFTGESMPDEWISDTSPCIRSSLRFMNTLESAEIYAVFF 37
+LD+AL GD++ AY +FE++ ++ + WI++ SPC+RSSL+++ T+ + + +VFF
Sbjct: 471 ALDKALLQGDIREAYKHLFEDL-CDAALDESWIAEVSPCLRSSLKWIGTVSLSSVCSVFF 529
Query: 36 LCEWATCCFRN 4
+CEWATC FR+
Sbjct: 530 ICEWATCDFRD 540
>ref|XP_003623963.1| Mediator of RNA polymerase II transcription subunit [Medicago
truncatula] gi|87240976|gb|ABD32834.1| 2-oxo acid
dehydrogenase, lipoyl-binding site [Medicago truncatula]
gi|355498978|gb|AES80181.1| Mediator of RNA polymerase II
transcription subunit [Medicago truncatula]
Length = 2270
Score = 181 bits (460), Expect = 2e-43
Identities = 104/247 (42%), Positives = 151/247 (61%), Gaps = 3/247 (1%)
Frame = -3
Query: 735 QEKESLDALEMLLPVLFEFVDTIILSQSHVRTFVDAIIQWLRLLSPSGNVPASKDNAREA 556
QEK+ L+ ++LLP+++ F++ ++LSQ++VRTF ++ +R +P G+ DN+R A
Sbjct: 354 QEKQLLEIWQLLLPIVYGFLEIVVLSQTYVRTFAGVALRIIRDPAPGGSDLV--DNSRRA 411
Query: 555 YNVIFLSEILRYLIIVVPDTFVSLDCFPLPSCVCLLP-PDNCLYPLTFYGDSK--GLSAD 385
Y L E+LRYLI+ VP+TFV+LDCFPLPS V L D P K SAD
Sbjct: 412 YTTAALIEMLRYLILAVPETFVALDCFPLPSSVVSLAINDGNFAPKAIEAADKIKSSSAD 471
Query: 384 LNISKQESADSLVERKISDRDISIANTIVSIQKRASNLAKSVCPGILRNNQGKVVQSLDR 205
+ I + + D E DR IS SIQK A NL K+V PG + K Q+LD+
Sbjct: 472 VCIFRSKGLDVRYESLAFDRVIS------SIQKHAENLTKAVSPGYPGHCLAKAAQALDK 525
Query: 204 ALALGDVKSAYHCVFEEVFTGESMPDEWISDTSPCIRSSLRFMNTLESAEIYAVFFLCEW 25
+L LGD+ A+ +FE+++ E D+W++ SPC+R SL++ + ++ IY+VFFLCEW
Sbjct: 526 SLVLGDLCEAFKYLFEDLYD-EPASDDWVAKVSPCLRLSLKWFANVNTSLIYSVFFLCEW 584
Query: 24 ATCCFRN 4
ATC FRN
Sbjct: 585 ATCDFRN 591
>gb|EOX95957.1| Mediator of RNA polymerase II transcription subunit 12 isoform 1
[Theobroma cacao]
Length = 2261
Score = 181 bits (458), Expect = 3e-43
Identities = 105/247 (42%), Positives = 150/247 (60%), Gaps = 4/247 (1%)
Frame = -3
Query: 732 EKESLDALEMLLPVLFEFVDTIILSQSHVRTFVDAIIQWLRLLSPSGNVPASKDNAREAY 553
EKE + L++LLP++F ++TIIL Q++VR V I+++R SP G+ DN+R AY
Sbjct: 345 EKELFEILQLLLPIIFGVLETIILCQTYVRNLVGIAIRFIREPSPGGSDLV--DNSRRAY 402
Query: 552 NVIFLSEILRYLIIVVPDTFVSLDCFPLPSCVCLLPPDNCLYPLTFYGDSKGLSADLNIS 373
+ L E+LRYLI VPDTFV+LDCFPLP+CV + L G S D
Sbjct: 403 TISALVEMLRYLIQAVPDTFVALDCFPLPTCV-------VSHALNDGGFLSKSSDDAGKI 455
Query: 372 KQESADSLVER----KISDRDISIANTIVSIQKRASNLAKSVCPGILRNNQGKVVQSLDR 205
K SAD+ V R + +S + + +IQKRA NLAK G + K VQ+LD+
Sbjct: 456 KHNSADAYVLRGKGFDSQYQSLSFDHVVSTIQKRADNLAKGTSAGYPSQSVAKAVQTLDK 515
Query: 204 ALALGDVKSAYHCVFEEVFTGESMPDEWISDTSPCIRSSLRFMNTLESAEIYAVFFLCEW 25
AL GD+ AY +FE + G ++ + W+++ SPC+RSSL+++ T+ + I +VFFLCEW
Sbjct: 516 ALLQGDLMEAYKHIFENLCDG-AVREGWVAEVSPCLRSSLKWIQTVNLSLICSVFFLCEW 574
Query: 24 ATCCFRN 4
ATC FR+
Sbjct: 575 ATCDFRD 581
>ref|XP_006576321.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X1 [Glycine max]
gi|571443813|ref|XP_006576322.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 12-like isoform
X2 [Glycine max]
Length = 2227
Score = 180 bits (456), Expect = 5e-43
Identities = 101/246 (41%), Positives = 147/246 (59%)
Frame = -3
Query: 741 QLQEKESLDALEMLLPVLFEFVDTIILSQSHVRTFVDAIIQWLRLLSPSGNVPASKDNAR 562
QLQEKE L+ ++LLP+++ F++TI+LSQS+VRT ++ +R +P G+ DN+R
Sbjct: 339 QLQEKELLEVWQLLLPIIYGFLETIVLSQSYVRTLAGLALRVIRDPAPGGSDLV--DNSR 396
Query: 561 EAYNVIFLSEILRYLIIVVPDTFVSLDCFPLPSCVCLLPPDNCLYPLTFYGDSKGLSADL 382
AY + E+LRYLI+VVPDTF +LDCFPLPS V +S +
Sbjct: 397 RAYTAYAVVEMLRYLILVVPDTFAALDCFPLPSSV--------------------ISHTM 436
Query: 381 NISKQESADSLVERKISDRDISIANTIVSIQKRASNLAKSVCPGILRNNQGKVVQSLDRA 202
N + KI + + I IQK +LAKS PG + KV ++LD++
Sbjct: 437 NDGSFVLKSTEAAGKIKNSSDDFGHIISCIQKHTEDLAKSASPGYPGHCLAKVAKALDKS 496
Query: 201 LALGDVKSAYHCVFEEVFTGESMPDEWISDTSPCIRSSLRFMNTLESAEIYAVFFLCEWA 22
L LGD++ AY +FEE+ G ++ + W+S SPC+R SL++ T+ +A IY+VFFLCEWA
Sbjct: 497 LVLGDLRVAYKFLFEEL-CGGTVSEGWVSKVSPCLRLSLKWFGTVNTALIYSVFFLCEWA 555
Query: 21 TCCFRN 4
TC FR+
Sbjct: 556 TCDFRD 561
>ref|XP_001776860.1| predicted protein [Physcomitrella patens]
gi|162671716|gb|EDQ58263.1| predicted protein
[Physcomitrella patens]
Length = 2120
Score = 180 bits (456), Expect = 5e-43
Identities = 93/247 (37%), Positives = 156/247 (63%), Gaps = 1/247 (0%)
Frame = -3
Query: 741 QLQEKESLDALEMLLPVLFEFVDTIILSQSHVRTFVDAIIQWLRLLSPSGNVPASKDNAR 562
QLQ+KESL+ALE+LLP++ E +D I SQ H R ++ +QWLR L SG+VP++ D+++
Sbjct: 266 QLQDKESLEALELLLPIVLELIDGISSSQIHSRMLIELCLQWLRKLYSSGHVPSTGDSSQ 325
Query: 561 EAYNVIFLSEILRYLIIVVPDTFVSLDCFPLPSCVCLLPPDNCLYPLTFYGDSKGLSADL 382
L ++L+YL++VVPDTFV+LDCFPLP V L ++ S L
Sbjct: 326 NNQVADTLVKLLQYLLLVVPDTFVALDCFPLPQPVSLGGSNSS----AIESSSNDLGRVN 381
Query: 381 NISKQESADSLVERKISDRDISIANTIVSIQKRASNLAKSVCPGILRNNQGKVVQSLDRA 202
++ + +S + ++ ++ ++ + ++ I++R ++LA++V P +LRNN+G++VQ+LD+A
Sbjct: 382 SLDEDQSIFNAKGKRKTNFEVGVDESVDLIERRTASLARAVSPTLLRNNEGRIVQALDKA 441
Query: 201 LALGDVKSAYHCVFEEVF-TGESMPDEWISDTSPCIRSSLRFMNTLESAEIYAVFFLCEW 25
L GD+ AY V++E F +++P +W +D R++ + +E+Y V FLCEW
Sbjct: 442 LEKGDIAGAYRSVYDEEFCRSDNLPTDWRADV--ISRTTFNLSGPVNPSELYPVRFLCEW 499
Query: 24 ATCCFRN 4
A C FR+
Sbjct: 500 AVCDFRD 506
>ref|XP_002302587.2| CRYPTIC PRECOCIOUS family protein [Populus trichocarpa]
gi|550345126|gb|EEE81860.2| CRYPTIC PRECOCIOUS family
protein [Populus trichocarpa]
Length = 2219
Score = 179 bits (455), Expect = 7e-43
Identities = 105/251 (41%), Positives = 154/251 (61%), Gaps = 5/251 (1%)
Frame = -3
Query: 741 QLQEKESLDALEMLLPVLFEFVDTIILSQSHVRTFVDAIIQWLRLLSPSGNVPASKDNAR 562
QLQEK+ L+ L++LLP+L+ ++T+ILSQS VRT V ++++ SP G+ DN+R
Sbjct: 289 QLQEKDLLEILQLLLPILYGVLETVILSQSFVRTLVGVAVRFIHEPSPGGSDLV--DNSR 346
Query: 561 EAYNVIFLSEILRYLIIVVPDTFVSLDCFPLPSCVCLLPPDNCLYPLTFYGDSKGLSADL 382
AY L E+LRYLI+ VPDTFV+LDCFPLP V ++ TF + S D
Sbjct: 347 RAYTTSALIEMLRYLILAVPDTFVALDCFPLPPSVVSYAVNDG----TFLSKA---SEDA 399
Query: 381 NISKQESADSLVERKISDRD-----ISIANTIVSIQKRASNLAKSVCPGILRNNQGKVVQ 217
+K SA+ + D +S + SIQKRA NLAK+V G ++ K +Q
Sbjct: 400 RKTKDNSAEVACVFRSKGLDAQYQSLSFDRVVSSIQKRADNLAKAVSSGYPVHSVAKALQ 459
Query: 216 SLDRALALGDVKSAYHCVFEEVFTGESMPDEWISDTSPCIRSSLRFMNTLESAEIYAVFF 37
+LD+AL+LGD++ AY +FE G ++ + WI + SPC+RSSL+++ + + I +VF
Sbjct: 460 ALDKALSLGDIREAYGYLFENFCEG-AVHESWIKEVSPCLRSSLKWLRGVSLSLICSVFL 518
Query: 36 LCEWATCCFRN 4
LCEWATC +R+
Sbjct: 519 LCEWATCDYRD 529
>ref|XP_004306783.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Fragaria vesca subsp. vesca]
Length = 2261
Score = 178 bits (452), Expect = 1e-42
Identities = 103/251 (41%), Positives = 154/251 (61%), Gaps = 5/251 (1%)
Frame = -3
Query: 741 QLQEKESLDALEMLLPVLFEFVDTIILSQSHVRTFVDAIIQWLRLLSPSGNVPASKDNAR 562
QLQEKE L+ +++LLP+++ ++T++LSQ++VR V ++++R PS DN+R
Sbjct: 338 QLQEKELLEIVQLLLPIIYGVLETVVLSQTYVRNLVGTAVRFIR--EPSQGGSDLVDNSR 395
Query: 561 EAYNVIFLSEILRYLIIVVPDTFVSLDCFPLPSCVCLLPPDNCLYPLTFYGDSKGLSADL 382
AY V L E+LRYL++ VPD+FV+LDCFPLP CV + G LS D+
Sbjct: 396 RAYTVSALVEMLRYLVLSVPDSFVALDCFPLPPCVVSYVANE--------GSLPKLSDDV 447
Query: 381 NISKQESAD--SLVERKISD---RDISIANTIVSIQKRASNLAKSVCPGILRNNQGKVVQ 217
K SA+ S+ K D + ++ + + SIQKRA NL KS P ++ K VQ
Sbjct: 448 RKIKIGSAEVASVFRSKAFDAQFQSLAFDHVVSSIQKRADNLEKSTSPSYPNHSIAKAVQ 507
Query: 216 SLDRALALGDVKSAYHCVFEEVFTGESMPDEWISDTSPCIRSSLRFMNTLESAEIYAVFF 37
+LDR+L GDV AY +FE+ G M + W+++ SP +R+SL+++ T+ + I +VFF
Sbjct: 508 ALDRSLVQGDVLGAYRFLFEDPCDG-IMNENWVAEVSPRLRTSLKWIGTVNLSFICSVFF 566
Query: 36 LCEWATCCFRN 4
LCEWATC FR+
Sbjct: 567 LCEWATCDFRD 577
>ref|XP_006827602.1| hypothetical protein AMTR_s00009p00238900 [Amborella trichopoda]
gi|548832222|gb|ERM95018.1| hypothetical protein
AMTR_s00009p00238900 [Amborella trichopoda]
Length = 2276
Score = 178 bits (451), Expect = 2e-42
Identities = 104/257 (40%), Positives = 162/257 (63%), Gaps = 11/257 (4%)
Frame = -3
Query: 741 QLQEKESLDALEMLLPVLFEFVDTIILSQSHVRTFVDAIIQWLRLLSPSGNVPASKDNAR 562
QLQE ESL+ L++LLP+++ +++I L QS+VR VD ++ L L+ + P DN+
Sbjct: 335 QLQENESLEVLKLLLPIVYNLIESIALCQSYVRMLVDISLRSLEELATWVSNPV--DNSL 392
Query: 561 EAYNVIFLSEILRYLIIVVPDTFVSLDCFPLPSCVCLLPPDNCLYPLTFYGDSKGLSADL 382
+Y L+E+L+YLI+ VPDTFV+LD FPLPSCV + DSK SA +
Sbjct: 393 RSYVASSLAELLQYLILNVPDTFVALDSFPLPSCV--------------FPDSKNASALV 438
Query: 381 NIS------KQESADSLVE-----RKISDRDISIANTIVSIQKRASNLAKSVCPGILRNN 235
IS + SA++ + R +S R ++ + + +IQ RA++L K+V PG+ +
Sbjct: 439 TISPDVRKGQSGSAENFNKGTKKGRFVSGRQVAFRHVVSAIQIRAAHLTKAVSPGLQGHL 498
Query: 234 QGKVVQSLDRALALGDVKSAYHCVFEEVFTGESMPDEWISDTSPCIRSSLRFMNTLESAE 55
+ K+VQSLD+ L LGDV+ A++ VFE+V ++ + WIS+ SP ++S L+++ + +
Sbjct: 499 EAKLVQSLDKTLILGDVRGAHNSVFEDVCDADA-AEGWISEVSPNLQSCLKWIGIVSQSL 557
Query: 54 IYAVFFLCEWATCCFRN 4
IY+VFFLCEWATC FR+
Sbjct: 558 IYSVFFLCEWATCDFRD 574
>ref|XP_004229878.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Solanum lycopersicum]
Length = 2262
Score = 177 bits (448), Expect = 4e-42
Identities = 104/249 (41%), Positives = 153/249 (61%), Gaps = 3/249 (1%)
Frame = -3
Query: 741 QLQEKESLDALEMLLPVLFEFVDTIILSQSHVRTFVDAIIQWLRLLSPSGNVPASKDNAR 562
QLQEKE L L++LLPV++ F+DT++LSQS VRT V +++++ SP G+ DN+R
Sbjct: 336 QLQEKELLGVLQLLLPVVYGFIDTVVLSQSCVRTLVGIALRFIQEPSPGGSDLV--DNSR 393
Query: 561 EAYNVIFLSEILRYLIIVVPDTFVSLDCFPLPSCVCL-LPPDNCLYPLTFYGDSKGLSAD 385
AY + L E+LRYL++ VPDTFV+LDCFP+P CV + D LY K +
Sbjct: 394 RAYTMAALVEMLRYLMLAVPDTFVALDCFPMPPCVMTNVVTDGSLYSKVTEDTRKVKNGP 453
Query: 384 LNISKQESADSLVER--KISDRDISIANTIVSIQKRASNLAKSVCPGILRNNQGKVVQSL 211
E A L ++ +I SI+ + SIQKRA +LA + PG + K + +L
Sbjct: 454 F-----EVAYFLRDKGPEIRSDSYSISRAVSSIQKRAQHLATAARPGHPGQSVVKALHAL 508
Query: 210 DRALALGDVKSAYHCVFEEVFTGESMPDEWISDTSPCIRSSLRFMNTLESAEIYAVFFLC 31
D+ALA GD++ AY +FE V S+ D W ++ S C+RSSL+++ + + I +VF++C
Sbjct: 509 DKALAHGDLREAYKFLFENVHE-SSIDDCWFAEVSSCLRSSLKYIRGVTLSSICSVFYIC 567
Query: 30 EWATCCFRN 4
EWATC FR+
Sbjct: 568 EWATCDFRD 576
>ref|XP_006339570.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X1 [Solanum tuberosum]
gi|565344967|ref|XP_006339571.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 12-like isoform
X2 [Solanum tuberosum]
Length = 2262
Score = 176 bits (447), Expect = 6e-42
Identities = 104/249 (41%), Positives = 152/249 (61%), Gaps = 3/249 (1%)
Frame = -3
Query: 741 QLQEKESLDALEMLLPVLFEFVDTIILSQSHVRTFVDAIIQWLRLLSPSGNVPASKDNAR 562
QLQEKE L L++LLPV++ F+DT++LSQS V T V I++++ SP G+ DN+R
Sbjct: 336 QLQEKELLGVLQLLLPVIYGFIDTVVLSQSCVHTLVGIAIRFIQEPSPGGSDLV--DNSR 393
Query: 561 EAYNVIFLSEILRYLIIVVPDTFVSLDCFPLPSCVCL-LPPDNCLYPLTFYGDSKGLSAD 385
AY + L E+LRYL++ VPDTFV+LDCFP+P CV + D LY K +
Sbjct: 394 RAYTMAALVEMLRYLMLAVPDTFVALDCFPMPPCVMTNVVTDGSLYSKVTEDTRKVKNGP 453
Query: 384 LNISKQESADSLVER--KISDRDISIANTIVSIQKRASNLAKSVCPGILRNNQGKVVQSL 211
E A L ++ ++ SI+ + SIQKRA +LA + PG + K + +L
Sbjct: 454 F-----EVAYFLRDKGPEVRSDSYSISRAVSSIQKRAQHLATAARPGHPGQSVVKALHAL 508
Query: 210 DRALALGDVKSAYHCVFEEVFTGESMPDEWISDTSPCIRSSLRFMNTLESAEIYAVFFLC 31
D+ALA GD++ AY +FE V S+ D W ++ S C+RSSL+++ + + I +VFF+C
Sbjct: 509 DKALAHGDLREAYKFLFENV-RESSIDDCWFAEVSSCLRSSLKYIRGVTLSSICSVFFIC 567
Query: 30 EWATCCFRN 4
EWATC FR+
Sbjct: 568 EWATCDFRD 576
>ref|XP_002334938.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 176 bits (446), Expect = 7e-42
Identities = 108/277 (38%), Positives = 155/277 (55%), Gaps = 31/277 (11%)
Frame = -3
Query: 741 QLQEKESLDALEMLLPVLFEFVDTIILSQSHVRTFVDAIIQWLRLLSPSGNVPASKDNAR 562
QLQEK+ L+ L++LLP+L+ ++T+ILSQS VRT V ++++ SP G+ DN+R
Sbjct: 57 QLQEKDLLEILQLLLPILYGVLETVILSQSFVRTLVGVAVRFIHEPSPGGSDLV--DNSR 114
Query: 561 EAYNVIFLSEILRYLIIVVPDTFVSLDCFPLPSCV------------------------- 457
AY L E+LRYLI+ VPDTFV+LDCFPLP V
Sbjct: 115 RAYTTSALIEMLRYLILAVPDTFVALDCFPLPPSVVSYAVNDGTFLSKGSAVPDTFVALD 174
Query: 456 CL-LPPDNCLYPLTFYGDSKGLSADLNISKQESADSLVERKISDRD-----ISIANTIVS 295
C LPP Y + S D +K SA+ + D +S + S
Sbjct: 175 CFPLPPSVVSYAVNDGTFLSKASEDARKTKDNSAEVACVFRSKGLDAQYQSLSFDRVVSS 234
Query: 294 IQKRASNLAKSVCPGILRNNQGKVVQSLDRALALGDVKSAYHCVFEEVFTGESMPDEWIS 115
IQKRA NLAK+V G ++ K +Q+LD+AL+LGD++ AY +FE G ++ + WI
Sbjct: 235 IQKRADNLAKAVSSGYPVHSVAKALQALDKALSLGDIREAYGYLFENFCEG-AVHESWIK 293
Query: 114 DTSPCIRSSLRFMNTLESAEIYAVFFLCEWATCCFRN 4
+ SPC+RSSL+++ + + I +VF LCEWATC +R+
Sbjct: 294 EVSPCLRSSLKWLRGVSLSLICSVFLLCEWATCDYRD 330