BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00016671
         (676 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16388.1| unknown [Picea sitchensis]                              72   2e-10
ref|XP_004235996.1| PREDICTED: pentatricopeptide repeat-containi...    63   9e-08
ref|XP_006297324.1| hypothetical protein CARUB_v10013344mg [Caps...    61   4e-07
ref|XP_006364201.1| PREDICTED: pentatricopeptide repeat-containi...    59   1e-06
ref|XP_006406138.1| hypothetical protein EUTSA_v10020419mg [Eutr...    58   2e-06
ref|NP_188906.1| pentatricopeptide repeat-containing protein [Ar...    58   3e-06
gb|EMJ17106.1| hypothetical protein PRUPE_ppa004160mg [Prunus pe...    58   3e-06
gb|EXB67320.1| hypothetical protein L484_025802 [Morus notabilis]      57   4e-06
ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containi...    56   9e-06

>gb|ABR16388.1| unknown [Picea sitchensis]
          Length = 700

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
 Frame = -2

Query: 408 KDSMVEEISKAMEDENNWETTLGKLIGPMDLNQKQKVAEMVLNHHQNDGQRALKFYSWMN 229
           ++  V +I KA+E E+ WE      +  M  +        VLN  Q D Q AL+F+ W +
Sbjct: 150 QEDTVNKICKAIE-EDQWECLQDNFLNSMAQDLNPDAVVKVLNL-QTDAQNALRFFQWAD 207

Query: 228 SLNGFAHSCDSSITLIQILVAAKNFDEVYSLLNKIRSK-CEVPVDILETLIRALGAEGKV 52
              G+ H+ D+  T+I IL  AK F E+ SLL K++++  E+   +L + + + G  G+ 
Sbjct: 208 KQEGYDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRF 267

Query: 51  NEALQVFDFGKKL 13
            E+L+ F+  K++
Sbjct: 268 KESLEAFNLMKEM 280


>ref|XP_004235996.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Solanum lycopersicum]
          Length = 550

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 6/134 (4%)
 Frame = -2

Query: 399 MVEEISKAMEDENNWETTLGKLIGPMDLNQKQKVAEMVLNHHQNDGQRALKFYSWMNSLN 220
           +V E+S+ + D  +    +   + P   +    V E VL   +N G  A +F+ W   L+
Sbjct: 72  LVNEVSRILSDYRSPHHDIESALNPFSGSVSNDVVEQVLKRCKNLGFSAHRFFIWAQKLS 131

Query: 219 GFAHSCDSSITLIQILVAAKNFDEVYSLLNKIRS--KCEVPVDILETLIRALGAEGKVNE 46
           GF HS +S   L+ IL ++K F  ++  L ++R+   CE+  +I   + RA    G   +
Sbjct: 132 GFCHSRESFRILVDILGSSKQFPLIWDFLVEMRTNRSCEITPEIFWLVFRAYSRAGLPAD 191

Query: 45  ALQVF----DFGKK 16
           A++ F    DFG K
Sbjct: 192 AIRAFNKMVDFGIK 205


>ref|XP_006297324.1| hypothetical protein CARUB_v10013344mg [Capsella rubella]
           gi|482566033|gb|EOA30222.1| hypothetical protein
           CARUB_v10013344mg [Capsella rubella]
          Length = 568

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
 Frame = -2

Query: 396 VEEISKAMEDENNWETTLGKLIGPM---DLNQKQKVAEMVLNHHQNDGQRALKFYSWMNS 226
           VE+I K  E  N  + + G ++  +   D+   + +   VL    N   +A  F+ W NS
Sbjct: 103 VEDIEKVCEFLNKKDASHGDVVKELSGCDVVVTESLVLQVLRRFSNGWNKAYGFFIWANS 162

Query: 225 LNGFAHSCDSSITLIQILVAAKNFDEVYSLLNKIRSKCE----VPVDILETLIRALGAEG 58
             G+ HS  S   ++ +L   +NFD ++ L++++  K +    V +D +  ++R L   G
Sbjct: 163 QTGYRHSAKSYNAMVDVLGKCRNFDLMWELVDEMMKKSDESGLVTLDTMSKVMRRLAKSG 222

Query: 57  KVNEALQVF 31
           K +EA++ F
Sbjct: 223 KYSEAVEAF 231


>ref|XP_006364201.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Solanum tuberosum]
          Length = 550

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
 Frame = -2

Query: 399 MVEEISKAMEDENNWETTLGKLIGPMDLNQKQKVAEMVLNHHQNDGQRALKFYSWMNSLN 220
           +V EIS+ + D  +    +   + P   +    V E VL   +N    A +F+ W   L+
Sbjct: 72  LVNEISRILSDYRSPHHDIESALNPFSGSISTDVVEQVLKRCKNLEFSAHRFFIWAQKLS 131

Query: 219 GFAHSCDSSITLIQILVAAKNFDEVYSLLNKIRS--KCEVPVDILETLIRALGAEGKVNE 46
           GF HS +S   L+ IL ++K F  ++  L ++R+   CE+  +I   + RA    G   +
Sbjct: 132 GFCHSRESFHILVDILGSSKQFPLIWDFLVEMRTNRSCEITPEIFLLVFRAYSRAGLPAD 191

Query: 45  ALQVF----DFGKK 16
           A++ F    DFG K
Sbjct: 192 AIRAFNKMVDFGIK 205


>ref|XP_006406138.1| hypothetical protein EUTSA_v10020419mg [Eutrema salsugineum]
           gi|557107284|gb|ESQ47591.1| hypothetical protein
           EUTSA_v10020419mg [Eutrema salsugineum]
          Length = 559

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 35/141 (24%), Positives = 70/141 (49%), Gaps = 7/141 (4%)
 Frame = -2

Query: 432 DSLTLEDVKDSMVEEISKAMEDENNWETTLGKLIGPM---DLNQKQKVAEMVLNHHQNDG 262
           + ++  +V    VE+I K  E  N  + + G ++  +   D+   + +   VL    N  
Sbjct: 88  EGVSTGNVAKKPVEDIDKVCEFLNKKDASHGDIVNELIGCDVVVSESLVLQVLRRFSNGW 147

Query: 261 QRALKFYSWMNSLNGFAHSCDSSITLIQILVAAKNFDEVYSLLNKIRSKCEVP----VDI 94
            +A  F+ W  S  G+ HS  +   ++ +L  ++NF+ ++ L++++  KCE P    +D 
Sbjct: 148 NQAYGFFVWAKSQTGYRHSSQAYNAMVDVLGKSRNFELMWRLVDEM--KCESPELVTLDT 205

Query: 93  LETLIRALGAEGKVNEALQVF 31
           +  ++R L   GK +EA+  F
Sbjct: 206 MSKVMRRLAKSGKYSEAVDAF 226


>ref|NP_188906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274241|sp|Q9LUJ4.1|PP248_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g22670, mitochondrial; Flags: Precursor
           gi|9279685|dbj|BAB01242.1| unnamed protein product
           [Arabidopsis thaliana] gi|332643142|gb|AEE76663.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 562

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
 Frame = -2

Query: 396 VEEISKAMEDENNWETT---LGKLIGPMDLNQKQKVAEMVLNHHQNDGQRALKFYSWMNS 226
           VE+I K  +  N  +T+   + K +   D+   + +   VL    N   +A  F+ W NS
Sbjct: 99  VEDIDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANS 158

Query: 225 LNGFAHSCDSSITLIQILVAAKNFDEVYSLLNKIRSKCE---VPVDILETLIRALGAEGK 55
             G+ HS  +   ++ +L   +NFD ++ L+N++    E   V +D +  ++R L   GK
Sbjct: 159 QTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGK 218

Query: 54  VNEALQVF 31
            N+A+  F
Sbjct: 219 YNKAVDAF 226


>gb|EMJ17106.1| hypothetical protein PRUPE_ppa004160mg [Prunus persica]
          Length = 526

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
 Frame = -2

Query: 399 MVEEISKAMEDENNWETTLGKLIGPMDLNQKQKVAEMVLNHHQNDGQRALKFYSWMNSLN 220
           +V EIS+ + D  N    L   + P+       + E VL   +N G  A +F+ W  ++ 
Sbjct: 49  LVNEISRILSDHRNAHHDLEHSLNPLCTQISTNLVEQVLKRCKNLGLSAHRFFLWAKTIP 108

Query: 219 GFAHSCDSSITLIQILVAAKNFDEVYSLLNKIR-SKC-EVPVDILETLIRALGAEGKVNE 46
           GF HS +S   LI+IL ++K +  ++  L ++R SKC E+  ++   + R         +
Sbjct: 109 GFQHSFESYHILIEILGSSKQYAVLWDFLIEVRESKCIEIVPEVFWLIFRVYSRANLPRD 168

Query: 45  ALQVFD 28
           A++ F+
Sbjct: 169 AIRAFN 174


>gb|EXB67320.1| hypothetical protein L484_025802 [Morus notabilis]
          Length = 529

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 6/133 (4%)
 Frame = -2

Query: 396 VEEISKAMEDENNWETTLGKLIGPMDLNQKQKVAEMVLNHHQNDGQRALKFYSWMNSLNG 217
           V ++S+ + D  N    L   +          + E VL   QN G  A +F+ W   + G
Sbjct: 55  VNDVSRVLSDRRNAHDDLEHSLAAFSTQISTNLVEQVLKRCQNLGFSAHRFFLWAKKIPG 114

Query: 216 FAHSCDSSITLIQILVAAKNFDEVYSLLNKIRSK--CEVPVDILETLIRALGAEGKVNEA 43
           F HS +S   L+ +L ++K F  ++ LL  +R    CE+  +I   + RA        +A
Sbjct: 115 FEHSVESYHILVDVLGSSKQFAVMWDLLMDVRESKCCEISPEIFWIVFRAYCRANLPRDA 174

Query: 42  LQVF----DFGKK 16
           ++ F    +FG K
Sbjct: 175 IRAFNRMVEFGVK 187


>ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial [Vitis vinifera]
          Length = 535

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 32/138 (23%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
 Frame = -2

Query: 441 SNLDSLTLEDVKDSMVEEISKAMEDENNWETTLGKLIGPMDLNQKQKVAEMVLNHHQNDG 262
           S +D   L++  DS +++IS+ ++  ++    + + +G   ++  + + E VL    ND 
Sbjct: 74  SKVDGYVLKETIDSDIDKISELLKFRHSSADAVVQALGGCGVSVSESLVEQVLKRFSNDW 133

Query: 261 QRALKFYSWMNSLNGFAHSCDSSITLIQILVAAKNFDEVYSLLNKI-RSKCEVPVDILET 85
             A  F+ W  +  G+ HS +S  +++ IL   K FD ++ L+ ++ R    V +  +  
Sbjct: 134 IPAFGFFKWAKAQTGYRHSMNSYNSMVDILGKLKKFDLMWELVEEMDRLGGYVSLATMTK 193

Query: 84  LIRALGAEGKVNEALQVF 31
           ++R L    +  +A++ F
Sbjct: 194 VMRRLARASRWKDAIEAF 211