BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00016418
         (480 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001753074.1| predicted protein [Physcomitrella patens] gi...   126   3e-27
ref|XP_001757499.1| predicted protein [Physcomitrella patens] gi...   126   3e-27
gb|ACN40249.1| unknown [Picea sitchensis]                             125   8e-27
ref|XP_001774172.1| predicted protein [Physcomitrella patens] gi...   125   8e-27
gb|EEC79074.1| hypothetical protein OsI_19658 [Oryza sativa Indi...   124   1e-26
dbj|BAC79849.1| putative pre-mRNA splicing factor SF2 [Oryza sat...   123   2e-26
gb|EEE67802.1| hypothetical protein OsJ_25544 [Oryza sativa Japo...   123   2e-26
gb|EEC82668.1| hypothetical protein OsI_27298 [Oryza sativa Indi...   123   2e-26
dbj|BAG97617.1| unnamed protein product [Oryza sativa Japonica G...   123   2e-26
ref|NP_001060608.1| Os07g0673500 [Oryza sativa Japonica Group] g...   123   2e-26
gb|AAC24092.1| Contains similarity to pre-mRNA splicing factor (...   122   4e-26
ref|XP_002977696.1| hypothetical protein SELMODRAFT_107678 [Sela...   122   4e-26
ref|NP_683288.2| serine-arginine rich RNA binding protein [Arabi...   122   4e-26
ref|NP_172386.3| serine-arginine rich RNA binding protein [Arabi...   122   4e-26
ref|XP_006658109.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   122   5e-26
gb|EEE63437.1| hypothetical protein OsJ_18250 [Oryza sativa Japo...   122   5e-26
ref|NP_001055323.1| Os05g0364600 [Oryza sativa Japonica Group] g...   122   5e-26
gb|AAV32234.1| putative pre-mRNA splicing factor SF2 [Oryza sati...   122   5e-26
gb|AAU10844.1| putative SF2/ASF splicing modulator Srp30 [Oryza ...   122   5e-26
gb|ABR17145.1| unknown [Picea sitchensis]                             122   6e-26

>ref|XP_001753074.1| predicted protein [Physcomitrella patens]
           gi|162695773|gb|EDQ82115.1| predicted protein
           [Physcomitrella patens]
          Length = 279

 Score =  126 bits (317), Expect = 3e-27
 Identities = 60/89 (67%), Positives = 69/89 (77%)
 Frame = -3

Query: 283 MRRSGNTIIFVGNLPGDMRRSEVEDLFAKYGHIVDIDLKLPPRPPGFCFIEFEEPVEAAD 104
           M    +  I+VGNLPGD+R  E+EDLF KYG IVDIDLKLPPRPPG+CFIEFE+  +A D
Sbjct: 1   MSSRASRTIYVGNLPGDVREREIEDLFYKYGRIVDIDLKLPPRPPGYCFIEFEDARDAED 60

Query: 103 AIKGRNGYEFDGRRLRVEWARGSQRSPPP 17
           AI+GR+GY FDG RLRVE A G  R PPP
Sbjct: 61  AIRGRDGYNFDGNRLRVEIAHGG-RGPPP 88


>ref|XP_001757499.1| predicted protein [Physcomitrella patens]
           gi|162691193|gb|EDQ77556.1| predicted protein
           [Physcomitrella patens]
          Length = 262

 Score =  126 bits (316), Expect = 3e-27
 Identities = 60/89 (67%), Positives = 69/89 (77%)
 Frame = -3

Query: 283 MRRSGNTIIFVGNLPGDMRRSEVEDLFAKYGHIVDIDLKLPPRPPGFCFIEFEEPVEAAD 104
           M    +  I+VGNLPGD+R  E+EDLF KYG IVDIDLKLPPRPPG+CFIEFE+  +A D
Sbjct: 1   MSSRASRTIYVGNLPGDVREREIEDLFYKYGRIVDIDLKLPPRPPGYCFIEFEDGRDAED 60

Query: 103 AIKGRNGYEFDGRRLRVEWARGSQRSPPP 17
           AI+GR+GY FDG RLRVE A G  R PPP
Sbjct: 61  AIRGRDGYNFDGNRLRVEIAHGG-RGPPP 88


>gb|ACN40249.1| unknown [Picea sitchensis]
          Length = 398

 Score =  125 bits (313), Expect = 8e-27
 Identities = 59/86 (68%), Positives = 71/86 (82%)
 Frame = -3

Query: 283 MRRSGNTIIFVGNLPGDMRRSEVEDLFAKYGHIVDIDLKLPPRPPGFCFIEFEEPVEAAD 104
           M+RS +TI +VGNLPGD+R SE+EDLF KYG I+DIDLKLPPRPPG+CFIEF+   +A D
Sbjct: 1   MKRSNSTI-YVGNLPGDIRESEIEDLFYKYGRIIDIDLKLPPRPPGYCFIEFDNARDAED 59

Query: 103 AIKGRNGYEFDGRRLRVEWARGSQRS 26
           AI+GR+GY+FDG RLRVE A G   S
Sbjct: 60  AIRGRDGYKFDGHRLRVERAHGRASS 85


>ref|XP_001774172.1| predicted protein [Physcomitrella patens]
           gi|162674440|gb|EDQ60948.1| predicted protein
           [Physcomitrella patens]
          Length = 240

 Score =  125 bits (313), Expect = 8e-27
 Identities = 58/89 (65%), Positives = 69/89 (77%)
 Frame = -3

Query: 283 MRRSGNTIIFVGNLPGDMRRSEVEDLFAKYGHIVDIDLKLPPRPPGFCFIEFEEPVEAAD 104
           M    +  I+VGNLPGD+R  E+ED+F KYG IVDIDLKLPPRPPG+CF+EFE+  +A D
Sbjct: 1   MSSRASRTIYVGNLPGDVREREIEDIFYKYGRIVDIDLKLPPRPPGYCFLEFEDARDAED 60

Query: 103 AIKGRNGYEFDGRRLRVEWARGSQRSPPP 17
           AI+GR+GY FDG RLRVE A G  R PPP
Sbjct: 61  AIRGRDGYNFDGNRLRVEIAHGG-RGPPP 88


>gb|EEC79074.1| hypothetical protein OsI_19658 [Oryza sativa Indica Group]
          Length = 328

 Score =  124 bits (311), Expect = 1e-26
 Identities = 57/84 (67%), Positives = 67/84 (79%)
 Frame = -3

Query: 283 MRRSGNTIIFVGNLPGDMRRSEVEDLFAKYGHIVDIDLKLPPRPPGFCFIEFEEPVEAAD 104
           M R  +  I+VGNLPGD+R  EVEDLF KYG IVDIDLK+PPRPPG+ F+EFE+P +A D
Sbjct: 24  MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 83

Query: 103 AIKGRNGYEFDGRRLRVEWARGSQ 32
           AI GRNGY+FDG RLRVE A G +
Sbjct: 84  AIYGRNGYDFDGHRLRVELAHGGR 107


>dbj|BAC79849.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
          Length = 362

 Score =  123 bits (309), Expect = 2e-26
 Identities = 57/84 (67%), Positives = 67/84 (79%)
 Frame = -3

Query: 283 MRRSGNTIIFVGNLPGDMRRSEVEDLFAKYGHIVDIDLKLPPRPPGFCFIEFEEPVEAAD 104
           M R  +  I+VGNLPGD+R  EVEDLF KYG IVDIDLK+PPRPPGF F+EFE+P +A D
Sbjct: 67  MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 126

Query: 103 AIKGRNGYEFDGRRLRVEWARGSQ 32
           AI+GR+GY FDG RLRVE A G +
Sbjct: 127 AIRGRDGYNFDGNRLRVELAHGGR 150


>gb|EEE67802.1| hypothetical protein OsJ_25544 [Oryza sativa Japonica Group]
          Length = 338

 Score =  123 bits (309), Expect = 2e-26
 Identities = 57/84 (67%), Positives = 67/84 (79%)
 Frame = -3

Query: 283 MRRSGNTIIFVGNLPGDMRRSEVEDLFAKYGHIVDIDLKLPPRPPGFCFIEFEEPVEAAD 104
           M R  +  I+VGNLPGD+R  EVEDLF KYG IVDIDLK+PPRPPGF F+EFE+P +A D
Sbjct: 67  MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 126

Query: 103 AIKGRNGYEFDGRRLRVEWARGSQ 32
           AI+GR+GY FDG RLRVE A G +
Sbjct: 127 AIRGRDGYNFDGNRLRVELAHGGR 150


>gb|EEC82668.1| hypothetical protein OsI_27298 [Oryza sativa Indica Group]
          Length = 321

 Score =  123 bits (309), Expect = 2e-26
 Identities = 57/84 (67%), Positives = 67/84 (79%)
 Frame = -3

Query: 283 MRRSGNTIIFVGNLPGDMRRSEVEDLFAKYGHIVDIDLKLPPRPPGFCFIEFEEPVEAAD 104
           M R  +  I+VGNLPGD+R  EVEDLF KYG IVDIDLK+PPRPPGF F+EFE+P +A D
Sbjct: 67  MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 126

Query: 103 AIKGRNGYEFDGRRLRVEWARGSQ 32
           AI+GR+GY FDG RLRVE A G +
Sbjct: 127 AIRGRDGYNFDGNRLRVELAHGGR 150


>dbj|BAG97617.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 247

 Score =  123 bits (309), Expect = 2e-26
 Identities = 57/84 (67%), Positives = 67/84 (79%)
 Frame = -3

Query: 283 MRRSGNTIIFVGNLPGDMRRSEVEDLFAKYGHIVDIDLKLPPRPPGFCFIEFEEPVEAAD 104
           M R  +  I+VGNLPGD+R  EVEDLF KYG IVDIDLK+PPRPPGF F+EFE+P +A D
Sbjct: 1   MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 60

Query: 103 AIKGRNGYEFDGRRLRVEWARGSQ 32
           AI+GR+GY FDG RLRVE A G +
Sbjct: 61  AIRGRDGYNFDGNRLRVELAHGGR 84


>ref|NP_001060608.1| Os07g0673500 [Oryza sativa Japonica Group]
           gi|113612144|dbj|BAF22522.1| Os07g0673500 [Oryza sativa
           Japonica Group]
          Length = 296

 Score =  123 bits (309), Expect = 2e-26
 Identities = 57/84 (67%), Positives = 67/84 (79%)
 Frame = -3

Query: 283 MRRSGNTIIFVGNLPGDMRRSEVEDLFAKYGHIVDIDLKLPPRPPGFCFIEFEEPVEAAD 104
           M R  +  I+VGNLPGD+R  EVEDLF KYG IVDIDLK+PPRPPGF F+EFE+P +A D
Sbjct: 1   MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 60

Query: 103 AIKGRNGYEFDGRRLRVEWARGSQ 32
           AI+GR+GY FDG RLRVE A G +
Sbjct: 61  AIRGRDGYNFDGNRLRVELAHGGR 84


>gb|AAC24092.1| Contains similarity to pre-mRNA splicing factor (SF2), P33 subunit
           gb|M72709 from Homo sapiens. ESTs gb|T42588 and
           gb|R65514 come from this gene [Arabidopsis thaliana]
          Length = 237

 Score =  122 bits (307), Expect = 4e-26
 Identities = 57/83 (68%), Positives = 68/83 (81%)
 Frame = -3

Query: 268 NTIIFVGNLPGDMRRSEVEDLFAKYGHIVDIDLKLPPRPPGFCFIEFEEPVEAADAIKGR 89
           N  I+VGNLPGD+R+ EVEDLF KYG IVDIDLK+PPRPPG+ F+EFE+P +A DAI GR
Sbjct: 6   NRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGR 65

Query: 88  NGYEFDGRRLRVEWARGSQRSPP 20
           +GY+FDG RLRVE A G +R  P
Sbjct: 66  DGYDFDGCRLRVEIAHGGRRFSP 88


>ref|XP_002977696.1| hypothetical protein SELMODRAFT_107678 [Selaginella moellendorffii]
           gi|300154399|gb|EFJ21034.1| hypothetical protein
           SELMODRAFT_107678 [Selaginella moellendorffii]
          Length = 298

 Score =  122 bits (307), Expect = 4e-26
 Identities = 61/88 (69%), Positives = 70/88 (79%)
 Frame = -3

Query: 283 MRRSGNTIIFVGNLPGDMRRSEVEDLFAKYGHIVDIDLKLPPRPPGFCFIEFEEPVEAAD 104
           M RS  TI +VGNLPGD+R  E++DLF KYG IVDIDLKLPPRPPG+CFIEFE+  +A D
Sbjct: 1   MSRSSRTI-YVGNLPGDVREREIDDLFHKYGPIVDIDLKLPPRPPGYCFIEFEDVRDAED 59

Query: 103 AIKGRNGYEFDGRRLRVEWARGSQRSPP 20
           AI+GR+GY FDG RLRVE A G  R PP
Sbjct: 60  AIRGRDGYNFDGYRLRVEIAHGG-RGPP 86


>ref|NP_683288.2| serine-arginine rich RNA binding protein [Arabidopsis thaliana]
           gi|4775271|emb|CAB42558.1| SF2/ASF-like splicing
           modulator Srp30, variant 1 [Arabidopsis thaliana]
           gi|332190280|gb|AEE28401.1| serine-arginine rich RNA
           binding protein [Arabidopsis thaliana]
          Length = 256

 Score =  122 bits (307), Expect = 4e-26
 Identities = 57/83 (68%), Positives = 68/83 (81%)
 Frame = -3

Query: 268 NTIIFVGNLPGDMRRSEVEDLFAKYGHIVDIDLKLPPRPPGFCFIEFEEPVEAADAIKGR 89
           N  I+VGNLPGD+R+ EVEDLF KYG IVDIDLK+PPRPPG+ F+EFE+P +A DAI GR
Sbjct: 6   NRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGR 65

Query: 88  NGYEFDGRRLRVEWARGSQRSPP 20
           +GY+FDG RLRVE A G +R  P
Sbjct: 66  DGYDFDGCRLRVEIAHGGRRFSP 88


>ref|NP_172386.3| serine-arginine rich RNA binding protein [Arabidopsis thaliana]
           gi|4775270|emb|CAB42557.1| SF2/ASF-like splicing
           modulator Srp30 [Arabidopsis thaliana]
           gi|23297699|gb|AAN13011.1| putative SF2/ASF splicing
           modulator Srp30 [Arabidopsis thaliana]
           gi|332190279|gb|AEE28400.1| serine-arginine rich RNA
           binding protein [Arabidopsis thaliana]
          Length = 268

 Score =  122 bits (307), Expect = 4e-26
 Identities = 57/83 (68%), Positives = 68/83 (81%)
 Frame = -3

Query: 268 NTIIFVGNLPGDMRRSEVEDLFAKYGHIVDIDLKLPPRPPGFCFIEFEEPVEAADAIKGR 89
           N  I+VGNLPGD+R+ EVEDLF KYG IVDIDLK+PPRPPG+ F+EFE+P +A DAI GR
Sbjct: 6   NRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGR 65

Query: 88  NGYEFDGRRLRVEWARGSQRSPP 20
           +GY+FDG RLRVE A G +R  P
Sbjct: 66  DGYDFDGCRLRVEIAHGGRRFSP 88


>ref|XP_006658109.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform X1 [Oryza
           brachyantha]
          Length = 288

 Score =  122 bits (306), Expect = 5e-26
 Identities = 57/84 (67%), Positives = 66/84 (78%)
 Frame = -3

Query: 283 MRRSGNTIIFVGNLPGDMRRSEVEDLFAKYGHIVDIDLKLPPRPPGFCFIEFEEPVEAAD 104
           M R  +  I+VGNLPGD+R  EVEDLF KYG IVDIDLK+PPRPPGF F+EFE+P +A D
Sbjct: 1   MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 60

Query: 103 AIKGRNGYEFDGRRLRVEWARGSQ 32
           AI GR+GY FDG RLRVE A G +
Sbjct: 61  AIHGRDGYNFDGNRLRVELAHGGR 84


>gb|EEE63437.1| hypothetical protein OsJ_18250 [Oryza sativa Japonica Group]
          Length = 305

 Score =  122 bits (306), Expect = 5e-26
 Identities = 56/84 (66%), Positives = 67/84 (79%)
 Frame = -3

Query: 283 MRRSGNTIIFVGNLPGDMRRSEVEDLFAKYGHIVDIDLKLPPRPPGFCFIEFEEPVEAAD 104
           M R  +  I+VGNLPGD+R  EVEDLF KYG IVDIDLK+PPRPPG+ F+EFE+P +A D
Sbjct: 1   MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 60

Query: 103 AIKGRNGYEFDGRRLRVEWARGSQ 32
           AI GR+GY+FDG RLRVE A G +
Sbjct: 61  AIYGRHGYDFDGHRLRVELAHGGR 84


>ref|NP_001055323.1| Os05g0364600 [Oryza sativa Japonica Group]
           gi|113578874|dbj|BAF17237.1| Os05g0364600 [Oryza sativa
           Japonica Group]
          Length = 294

 Score =  122 bits (306), Expect = 5e-26
 Identities = 56/84 (66%), Positives = 67/84 (79%)
 Frame = -3

Query: 283 MRRSGNTIIFVGNLPGDMRRSEVEDLFAKYGHIVDIDLKLPPRPPGFCFIEFEEPVEAAD 104
           M R  +  I+VGNLPGD+R  EVEDLF KYG IVDIDLK+PPRPPG+ F+EFE+P +A D
Sbjct: 1   MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 60

Query: 103 AIKGRNGYEFDGRRLRVEWARGSQ 32
           AI GR+GY+FDG RLRVE A G +
Sbjct: 61  AIYGRHGYDFDGHRLRVELAHGGR 84


>gb|AAV32234.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
          Length = 151

 Score =  122 bits (306), Expect = 5e-26
 Identities = 56/84 (66%), Positives = 67/84 (79%)
 Frame = -3

Query: 283 MRRSGNTIIFVGNLPGDMRRSEVEDLFAKYGHIVDIDLKLPPRPPGFCFIEFEEPVEAAD 104
           M R  +  I+VGNLPGD+R  EVEDLF KYG IVDIDLK+PPRPPG+ F+EFE+P +A D
Sbjct: 1   MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 60

Query: 103 AIKGRNGYEFDGRRLRVEWARGSQ 32
           AI GR+GY+FDG RLRVE A G +
Sbjct: 61  AIYGRHGYDFDGHRLRVELAHGGR 84


>gb|AAU10844.1| putative SF2/ASF splicing modulator Srp30 [Oryza sativa Japonica
           Group]
          Length = 145

 Score =  122 bits (306), Expect = 5e-26
 Identities = 56/84 (66%), Positives = 67/84 (79%)
 Frame = -3

Query: 283 MRRSGNTIIFVGNLPGDMRRSEVEDLFAKYGHIVDIDLKLPPRPPGFCFIEFEEPVEAAD 104
           M R  +  I+VGNLPGD+R  EVEDLF KYG IVDIDLK+PPRPPG+ F+EFE+P +A D
Sbjct: 1   MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 60

Query: 103 AIKGRNGYEFDGRRLRVEWARGSQ 32
           AI GR+GY+FDG RLRVE A G +
Sbjct: 61  AIYGRHGYDFDGHRLRVELAHGGR 84


>gb|ABR17145.1| unknown [Picea sitchensis]
          Length = 263

 Score =  122 bits (305), Expect = 6e-26
 Identities = 51/78 (65%), Positives = 67/78 (85%)
 Frame = -3

Query: 259 IFVGNLPGDMRRSEVEDLFAKYGHIVDIDLKLPPRPPGFCFIEFEEPVEAADAIKGRNGY 80
           ++VGNLPGD+R  E+EDLF KYG I+D+DLK+PPRPPG+CFIEFE+  +A DAI+GR+GY
Sbjct: 9   LYVGNLPGDVREGEIEDLFYKYGRIIDVDLKVPPRPPGYCFIEFEDARDAEDAIRGRDGY 68

Query: 79  EFDGRRLRVEWARGSQRS 26
            FDG R+RVE+A G +R+
Sbjct: 69  NFDGHRIRVEFAHGGRRT 86