BLASTX nr result
ID: Ephedra25_contig00016396
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00016396
(587 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006829234.1| hypothetical protein AMTR_s00001p00272430 [A... 93 6e-17
ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containi... 90 5e-16
emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera] 90 5e-16
gb|EPS73575.1| hypothetical protein M569_01175 [Genlisea aurea] 87 2e-15
ref|XP_006453335.1| hypothetical protein CICLE_v10007460mg [Citr... 79 7e-13
gb|EOY31850.1| Tetratricopeptide repeat (TPR)-like superfamily p... 79 7e-13
ref|XP_006344540.1| PREDICTED: pentatricopeptide repeat-containi... 79 9e-13
ref|XP_004296451.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
ref|XP_004242906.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
ref|XP_006658757.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 78 2e-12
pdb|4M59|A Chain A, Crystal Structure Of The Pentatricopeptide R... 78 2e-12
ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays] gi|218... 78 2e-12
ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containi... 77 3e-12
gb|EXC05166.1| hypothetical protein L484_003973 [Morus notabilis] 76 6e-12
ref|XP_004487947.1| PREDICTED: pentatricopeptide repeat-containi... 76 6e-12
ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [S... 76 6e-12
ref|XP_006409097.1| hypothetical protein EUTSA_v10022551mg [Eutr... 75 1e-11
ref|XP_004965679.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-11
gb|ESW10803.1| hypothetical protein PHAVU_009G239200g [Phaseolus... 75 2e-11
gb|ESW10802.1| hypothetical protein PHAVU_009G239200g [Phaseolus... 75 2e-11
>ref|XP_006829234.1| hypothetical protein AMTR_s00001p00272430 [Amborella trichopoda]
gi|548834213|gb|ERM96650.1| hypothetical protein
AMTR_s00001p00272430 [Amborella trichopoda]
Length = 811
Score = 92.8 bits (229), Expect = 6e-17
Identities = 38/85 (44%), Positives = 60/85 (70%)
Frame = +2
Query: 2 PCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENYCTSGSFQDAYKF 181
PC +T+NT VAGYS+L +FE+ D++ YM +H C P+E TY+ +++ YC + F+DA F
Sbjct: 723 PCTVTYNTFVAGYSSLGLFEEVRDVIKYMVEHNCRPNELTYNTVIDAYCRARKFRDAMDF 782
Query: 182 LGNIRETDKVLKDAGLKKLYYLVKK 256
+ NIRE D +L+D ++KL V++
Sbjct: 783 VSNIRELDPLLEDQSVRKLATRVRE 807
>ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera] gi|297735424|emb|CBI17864.3| unnamed
protein product [Vitis vinifera]
Length = 821
Score = 89.7 bits (221), Expect = 5e-16
Identities = 36/86 (41%), Positives = 55/86 (63%)
Frame = +2
Query: 2 PCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENYCTSGSFQDAYKF 181
PCI+T+NT VAGYS MF + +++ YM QH C P+E TY +V+ YC +++A F
Sbjct: 733 PCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDF 792
Query: 182 LGNIRETDKVLKDAGLKKLYYLVKKH 259
+ NI E DK D L++L + +++H
Sbjct: 793 VSNITEMDKSFDDQSLRRLTFRIREH 818
>emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 89.7 bits (221), Expect = 5e-16
Identities = 36/86 (41%), Positives = 55/86 (63%)
Frame = +2
Query: 2 PCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENYCTSGSFQDAYKF 181
PCI+T+NT VAGYS MF + +++ YM QH C P+E TY +V+ YC +++A F
Sbjct: 733 PCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDF 792
Query: 182 LGNIRETDKVLKDAGLKKLYYLVKKH 259
+ NI E DK D L++L + +++H
Sbjct: 793 VSNITEMDKSFDDQSLRRLTFRIREH 818
>gb|EPS73575.1| hypothetical protein M569_01175 [Genlisea aurea]
Length = 760
Score = 87.4 bits (215), Expect = 2e-15
Identities = 37/86 (43%), Positives = 59/86 (68%)
Frame = +2
Query: 2 PCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENYCTSGSFQDAYKF 181
PCI+T+NTLV G+S MF + +++DYM ++GC P+E TY+ +V+ YC + +DA F
Sbjct: 671 PCIVTYNTLVGGFSGRGMFNEVDELIDYMVENGCRPNELTYNKVVDGYCKARRSKDAMDF 730
Query: 182 LGNIRETDKVLKDAGLKKLYYLVKKH 259
+G IRE D + GL++L Y V+++
Sbjct: 731 VGRIRERDGGYGEEGLQRLVYRVREN 756
>ref|XP_006453335.1| hypothetical protein CICLE_v10007460mg [Citrus clementina]
gi|567922660|ref|XP_006453336.1| hypothetical protein
CICLE_v10007460mg [Citrus clementina]
gi|568840495|ref|XP_006474202.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g18940,
chloroplastic-like [Citrus sinensis]
gi|557556561|gb|ESR66575.1| hypothetical protein
CICLE_v10007460mg [Citrus clementina]
gi|557556562|gb|ESR66576.1| hypothetical protein
CICLE_v10007460mg [Citrus clementina]
Length = 824
Score = 79.3 bits (194), Expect = 7e-13
Identities = 32/85 (37%), Positives = 53/85 (62%)
Frame = +2
Query: 2 PCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENYCTSGSFQDAYKF 181
PCI T+NT V+GY+ MF + +++ +M QH C P+E TY +V+ YC + +++A F
Sbjct: 736 PCIFTYNTFVSGYAGQGMFTEIDEVIKHMFQHNCKPNELTYKIVVDGYCKARKYKEAMDF 795
Query: 182 LGNIRETDKVLKDAGLKKLYYLVKK 256
L I+E D D +K+L + V++
Sbjct: 796 LSKIKERDDSFNDESVKRLTFRVRE 820
>gb|EOY31850.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 845
Score = 79.3 bits (194), Expect = 7e-13
Identities = 32/86 (37%), Positives = 54/86 (62%)
Frame = +2
Query: 2 PCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENYCTSGSFQDAYKF 181
PCI T+NT VAGY++ MF + D++ YM QH C P+E TY +V+ YC + +++A F
Sbjct: 757 PCIFTYNTFVAGYASQGMFTEIDDVIGYMIQHNCKPNELTYKIVVDGYCKARRYKEAMDF 816
Query: 182 LGNIRETDKVLKDAGLKKLYYLVKKH 259
+ I+E D + + +L + V+++
Sbjct: 817 VSKIKEIDDSFDEQSIDRLAFRVREN 842
>ref|XP_006344540.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940,
chloroplastic-like [Solanum tuberosum]
Length = 842
Score = 79.0 bits (193), Expect = 9e-13
Identities = 33/86 (38%), Positives = 54/86 (62%)
Frame = +2
Query: 2 PCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENYCTSGSFQDAYKF 181
PCI+T+NT +AG++ MF + +++ YM QH C P+E TY IV+ YC + +QDA F
Sbjct: 754 PCIVTYNTFIAGFAARGMFSEVNELISYMIQHECRPNELTYKTIVDGYCKAKRYQDAMDF 813
Query: 182 LGNIRETDKVLKDAGLKKLYYLVKKH 259
+ NI+E D + L++ V+++
Sbjct: 814 VLNIKEKDNTFDEESLQRFASRVREN 839
>ref|XP_004296451.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Fragaria vesca subsp. vesca]
Length = 846
Score = 78.2 bits (191), Expect = 1e-12
Identities = 32/79 (40%), Positives = 48/79 (60%)
Frame = +2
Query: 2 PCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENYCTSGSFQDAYKF 181
PCI T+NT V GYS MF + +++ YM Q+ C P+E TY +V+ YC + F++A F
Sbjct: 749 PCIFTYNTFVTGYSGRGMFSEVDEVISYMTQNNCKPNELTYKIVVDGYCKARKFEEAMDF 808
Query: 182 LGNIRETDKVLKDAGLKKL 238
L I+E D D +++L
Sbjct: 809 LSKIKEIDNSFDDGYVERL 827
>ref|XP_004242906.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940-like
[Solanum lycopersicum]
Length = 842
Score = 78.2 bits (191), Expect = 1e-12
Identities = 33/86 (38%), Positives = 54/86 (62%)
Frame = +2
Query: 2 PCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENYCTSGSFQDAYKF 181
PCI+T+NT +AG++ MF + +++ YM QH C P+E TY IV+ YC + +QDA F
Sbjct: 754 PCIVTYNTFMAGFAARGMFSEVNELISYMIQHKCRPNELTYKTIVDGYCKAKRYQDAMDF 813
Query: 182 LGNIRETDKVLKDAGLKKLYYLVKKH 259
+ NI+E D + L++ V+++
Sbjct: 814 VLNIKEKDNTFDEESLQRFASRVREN 839
>ref|XP_006658757.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g02860-like [Oryza brachyantha]
Length = 677
Score = 77.8 bits (190), Expect = 2e-12
Identities = 34/88 (38%), Positives = 56/88 (63%)
Frame = +2
Query: 2 PCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENYCTSGSFQDAYKF 181
P ++T+N V Y + +MFE+AID+V YM GC P+E+TY+ I++ YCT+G DA +F
Sbjct: 589 PDVVTYNIFVKSYVSNSMFEEAIDLVRYMVTQGCKPNERTYNTILQGYCTNGRLVDAKRF 648
Query: 182 LGNIRETDKVLKDAGLKKLYYLVKKHQR 265
+ N+ + + +KL+ ++ KH R
Sbjct: 649 VSNLPQLHPGISKQEQQKLFEVLAKHTR 676
>pdb|4M59|A Chain A, Crystal Structure Of The Pentatricopeptide Repeat Protein
Ppr10 In Complex With An 18-nt Psaj Rna Element
gi|554793797|pdb|4M59|B Chain B, Crystal Structure Of
The Pentatricopeptide Repeat Protein Ppr10 In Complex
With An 18-nt Psaj Rna Element
Length = 718
Score = 77.8 bits (190), Expect = 2e-12
Identities = 33/68 (48%), Positives = 47/68 (69%)
Frame = +2
Query: 2 PCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENYCTSGSFQDAYKF 181
PC +T++TLV GYS+L MF +A +++ YM QHG P E TY +VE+YC + F++A F
Sbjct: 632 PCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAKRFEEARGF 691
Query: 182 LGNIRETD 205
L + ETD
Sbjct: 692 LSEVSETD 699
>ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays] gi|218684531|gb|ACL01094.1|
chloroplast pentatricopeptide repeat protein 10 [Zea
mays] gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10
[Zea mays]
Length = 786
Score = 77.8 bits (190), Expect = 2e-12
Identities = 33/68 (48%), Positives = 47/68 (69%)
Frame = +2
Query: 2 PCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENYCTSGSFQDAYKF 181
PC +T++TLV GYS+L MF +A +++ YM QHG P E TY +VE+YC + F++A F
Sbjct: 700 PCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAKRFEEARGF 759
Query: 182 LGNIRETD 205
L + ETD
Sbjct: 760 LSEVSETD 767
>ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940,
chloroplastic-like [Glycine max]
Length = 829
Score = 77.0 bits (188), Expect = 3e-12
Identities = 29/79 (36%), Positives = 53/79 (67%)
Frame = +2
Query: 2 PCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENYCTSGSFQDAYKF 181
P I+T+NT ++GY+ + +F++A +++ +M +H C PSE TY +V+ YC +G +++A F
Sbjct: 739 PTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKYEEAMDF 798
Query: 182 LGNIRETDKVLKDAGLKKL 238
+ I+E D D +K+L
Sbjct: 799 VSKIKELDISFDDQSVKRL 817
>gb|EXC05166.1| hypothetical protein L484_003973 [Morus notabilis]
Length = 807
Score = 76.3 bits (186), Expect = 6e-12
Identities = 30/79 (37%), Positives = 49/79 (62%)
Frame = +2
Query: 2 PCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENYCTSGSFQDAYKF 181
PCI T+NT V GY MF + +++ YM ++ C P+E TY +V+ YC +G +++A F
Sbjct: 719 PCIFTYNTFVTGYVGRGMFSEVDEVIRYMIENNCRPNELTYKIVVDGYCKAGRYKEAMDF 778
Query: 182 LGNIRETDKVLKDAGLKKL 238
+ NI+E D D +++L
Sbjct: 779 VSNIKEVDNSFDDHSVQRL 797
>ref|XP_004487947.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940-like
[Cicer arietinum]
Length = 840
Score = 76.3 bits (186), Expect = 6e-12
Identities = 32/88 (36%), Positives = 54/88 (61%)
Frame = +2
Query: 2 PCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENYCTSGSFQDAYKF 181
PC ITFNT ++ Y+ +F +A +++ YM +HGCMP+E TY +++ YC + ++A F
Sbjct: 752 PCPITFNTFLSCYAGKGLFAEAGEVIRYMIEHGCMPNELTYKIVIDGYCKAKKHKEALDF 811
Query: 182 LGNIRETDKVLKDAGLKKLYYLVKKHQR 265
+ I+E D D +K+L +K+ R
Sbjct: 812 VSKIKEVDISFDDQSVKRLASCIKESLR 839
>ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein
SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 76.3 bits (186), Expect = 6e-12
Identities = 34/90 (37%), Positives = 55/90 (61%)
Frame = +2
Query: 2 PCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENYCTSGSFQDAYKF 181
PC++T++TLV GY++L MF +A ++++YM QH P E TY +V++YC + F++A F
Sbjct: 697 PCVVTYHTLVGGYASLEMFSEAREVINYMIQHNLKPMELTYRRVVDSYCKAKRFEEARSF 756
Query: 182 LGNIRETDKVLKDAGLKKLYYLVKKHQRGQ 271
L + ETD L L ++ Q G+
Sbjct: 757 LSEVSETDPNFDKKVLHTLAAYIEDAQFGR 786
>ref|XP_006409097.1| hypothetical protein EUTSA_v10022551mg [Eutrema salsugineum]
gi|557110259|gb|ESQ50550.1| hypothetical protein
EUTSA_v10022551mg [Eutrema salsugineum]
Length = 838
Score = 75.1 bits (183), Expect = 1e-11
Identities = 30/84 (35%), Positives = 52/84 (61%)
Frame = +2
Query: 2 PCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENYCTSGSFQDAYKF 181
PCI T+NT V+GY+ + MFE+ D+++ M ++ C P+E TY +V+ YC +G + +A F
Sbjct: 750 PCIFTYNTFVSGYTAMGMFEEIEDVIECMAKNECRPNELTYKMVVDGYCRAGRYSEAMDF 809
Query: 182 LGNIRETDKVLKDAGLKKLYYLVK 253
+ I+ D D +++L V+
Sbjct: 810 VSKIKTLDAYFDDQSIQRLAQRVR 833
>ref|XP_004965679.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Setaria italica]
Length = 788
Score = 75.1 bits (183), Expect = 1e-11
Identities = 33/90 (36%), Positives = 55/90 (61%)
Frame = +2
Query: 2 PCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENYCTSGSFQDAYKF 181
PC++T++TLV GY++L MF +A +++ YM QH P E TY +V++YC + +++A F
Sbjct: 699 PCVVTYHTLVGGYASLEMFSEAREVISYMIQHNLRPMELTYRRVVDSYCKAKRYEEARDF 758
Query: 182 LGNIRETDKVLKDAGLKKLYYLVKKHQRGQ 271
L + ETD L+ L ++ Q G+
Sbjct: 759 LSGVSETDPNFDKKVLRTLVDRIEDAQFGR 788
>gb|ESW10803.1| hypothetical protein PHAVU_009G239200g [Phaseolus vulgaris]
Length = 831
Score = 74.7 bits (182), Expect = 2e-11
Identities = 27/79 (34%), Positives = 52/79 (65%)
Frame = +2
Query: 2 PCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENYCTSGSFQDAYKF 181
P ++++NT ++GY+ + +F++AI+++ +M +H C P+E TY +V+ YC +G + A F
Sbjct: 741 PTVVSYNTFLSGYAGMQLFDEAIEVIRFMIEHNCRPNELTYKIVVDGYCKAGKHEQAMDF 800
Query: 182 LGNIRETDKVLKDAGLKKL 238
+ I+E D D +K+L
Sbjct: 801 VSKIKEIDISFDDRSVKRL 819
>gb|ESW10802.1| hypothetical protein PHAVU_009G239200g [Phaseolus vulgaris]
Length = 644
Score = 74.7 bits (182), Expect = 2e-11
Identities = 27/79 (34%), Positives = 52/79 (65%)
Frame = +2
Query: 2 PCIITFNTLVAGYSNLAMFEKAIDIVDYMKQHGCMPSEKTYSYIVENYCTSGSFQDAYKF 181
P ++++NT ++GY+ + +F++AI+++ +M +H C P+E TY +V+ YC +G + A F
Sbjct: 554 PTVVSYNTFLSGYAGMQLFDEAIEVIRFMIEHNCRPNELTYKIVVDGYCKAGKHEQAMDF 613
Query: 182 LGNIRETDKVLKDAGLKKL 238
+ I+E D D +K+L
Sbjct: 614 VSKIKEIDISFDDRSVKRL 632