BLASTX nr result

ID: Ephedra25_contig00016316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00016316
         (683 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006854080.1| hypothetical protein AMTR_s00048p00122750 [A...    65   2e-08
ref|XP_006361265.1| PREDICTED: inactive poly [ADP-ribose] polyme...    63   1e-07
ref|XP_006849443.1| hypothetical protein AMTR_s00024p00059840 [A...    59   1e-06
gb|ACN27891.1| unknown [Zea mays]                                      59   1e-06
ref|NP_001146014.1| hypothetical protein [Zea mays] gi|219885325...    59   1e-06
gb|EMT23623.1| hypothetical protein F775_03099 [Aegilops tauschii]     56   9e-06

>ref|XP_006854080.1| hypothetical protein AMTR_s00048p00122750 [Amborella trichopoda]
           gi|548857749|gb|ERN15547.1| hypothetical protein
           AMTR_s00048p00122750 [Amborella trichopoda]
          Length = 607

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 5/143 (3%)
 Frame = +2

Query: 269 VRLFPAHFPISGATYASVNKSGEQEMMFGKLILGDIVEGSSDSEQLSLENGQYLTVADNA 448
           + L P+ +    A    V+++G Q M+   +I+G++ +  S SEQ    N  + +  DN 
Sbjct: 380 IYLRPSRYSHISARSCDVDENGMQHMVLCCVIMGNMEQVQSGSEQFHPGNENFDSGVDNH 439

Query: 449 SNPTCYFLWRESIRARFMPEYVVIFKISPLETEYWAKAQE---IARTVSPHDNAP-NDKL 616
            NP CY +W   +     PEYVV FK+ P   EY A  +E    A T    D+   N K 
Sbjct: 440 ENPKCYIVWNTHMNTHIYPEYVVSFKVPPSAREYLAGIRENESKADTSRVADSTVFNSKS 499

Query: 617 DREP-TGEMEKKPKDSTEDVQKT 682
            +EP T ++ +  ++    V+K+
Sbjct: 500 QQEPFTVDLARNSQNLASHVEKS 522


>ref|XP_006361265.1| PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like isoform
           X1 [Solanum tuberosum] gi|565391106|ref|XP_006361266.1|
           PREDICTED: inactive poly [ADP-ribose] polymerase
           RCD1-like isoform X2 [Solanum tuberosum]
          Length = 600

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 5/129 (3%)
 Frame = +2

Query: 245 NNSQPSGPVRLFPAHFPISGATYASVNKSGEQEMMFGKLILGDIVEGSSDSEQLSLENGQ 424
           +NS     V LFPA+     A Y+ V+++G Q M+  ++I+G++      S Q    +  
Sbjct: 361 SNSSYGIGVHLFPANCSEISAKYSDVDENGVQYMILCRVIMGNMELVCPGSNQFHPSSED 420

Query: 425 YLTVADNASNPTCYFLWRESIRARFMPEYVVIFKISPLETEYWA--KAQEIARTVS---P 589
           +    D+  NP CY +W  ++     PEYVV FK SP    Y    K+  ++   S   P
Sbjct: 421 FDNGVDSVENPKCYVVWTMNMSTHIFPEYVVSFKFSPDSEGYLVGNKSPNVSAVTSCQGP 480

Query: 590 HDNAPNDKL 616
            D  P D L
Sbjct: 481 VDQLPADTL 489


>ref|XP_006849443.1| hypothetical protein AMTR_s00024p00059840 [Amborella trichopoda]
           gi|548853018|gb|ERN11024.1| hypothetical protein
           AMTR_s00024p00059840 [Amborella trichopoda]
          Length = 733

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 28/95 (29%), Positives = 48/95 (50%)
 Frame = +2

Query: 269 VRLFPAHFPISGATYASVNKSGEQEMMFGKLILGDIVEGSSDSEQLSLENGQYLTVADNA 448
           + L P       A Y  V+++G Q M+  ++I+G++ +    +EQ    + ++ +  D+ 
Sbjct: 513 IYLSPEDCSYISANYCDVDENGVQHMVLCRIIMGNMEQVQPGAEQFHPSSEKFDSGVDDL 572

Query: 449 SNPTCYFLWRESIRARFMPEYVVIFKISPLETEYW 553
            NP  Y +W   +     PEYVV FK+ P   EYW
Sbjct: 573 QNPKHYIIWSTHMNTHIYPEYVVSFKVPPNIQEYW 607


>gb|ACN27891.1| unknown [Zea mays]
          Length = 371

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 40/140 (28%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
 Frame = +2

Query: 269 VRLFPAHFPISGATYASVNKSGEQEMMFGKLILGDIVEGSSDSEQLSLENGQYLTVADNA 448
           V L P H P   AT A  + SGE  ++  ++++G      + S Q    +  Y +  D  
Sbjct: 200 VHLSPPHCPYRSATLAKADGSGEAHIVLCRVLMGRPEAVPAGSSQSCPSSHNYDSAVDKL 259

Query: 449 SNPTCYFLWRESIRARFMPEYVVIFKISPLETEYWAKAQEIARTVSPHDNAPNDKLDREP 628
            N   Y +W + +  R +PEYVV FK S L+       QE++   S          D  P
Sbjct: 260 DNTQWYVVWNQDMNTRILPEYVVSFKCSKLQL-----TQELSEATSKLKKPSRVARDMFP 314

Query: 629 T--GEMEKKPKDSTEDVQKT 682
           T   E+EK   D  + +Q++
Sbjct: 315 TLLAEIEKIVPDKCDLLQES 334


>ref|NP_001146014.1| hypothetical protein [Zea mays] gi|219885325|gb|ACL53037.1| unknown
           [Zea mays] gi|223947953|gb|ACN28060.1| unknown [Zea
           mays] gi|413956447|gb|AFW89096.1| hypothetical protein
           ZEAMMB73_663979 [Zea mays]
          Length = 448

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 40/140 (28%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
 Frame = +2

Query: 269 VRLFPAHFPISGATYASVNKSGEQEMMFGKLILGDIVEGSSDSEQLSLENGQYLTVADNA 448
           V L P H P   AT A  + SGE  ++  ++++G      + S Q    +  Y +  D  
Sbjct: 277 VHLSPPHCPYRSATLAKADGSGEAHIVLCRVLMGRPEAVPAGSSQSCPSSHNYDSAVDKL 336

Query: 449 SNPTCYFLWRESIRARFMPEYVVIFKISPLETEYWAKAQEIARTVSPHDNAPNDKLDREP 628
            N   Y +W + +  R +PEYVV FK S L+       QE++   S          D  P
Sbjct: 337 DNTQWYVVWNQDMNTRILPEYVVSFKCSKLQL-----TQELSEATSKLKKPSRVARDMFP 391

Query: 629 T--GEMEKKPKDSTEDVQKT 682
           T   E+EK   D  + +Q++
Sbjct: 392 TLLAEIEKIVPDKCDLLQES 411


>gb|EMT23623.1| hypothetical protein F775_03099 [Aegilops tauschii]
          Length = 439

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
 Frame = +2

Query: 269 VRLFPAHFPISGATYASVNKSGEQEMMFGKLILGDIVEGSSDSEQLSLENGQYLTVADNA 448
           V L P   P + A  A+ +++GE  ++  ++++G      + S QL   +  Y +  DN 
Sbjct: 267 VHLSPPQSPYASAMLANADENGEAHIVLCRVLMGRPEAIPAGSSQLHPSSDDYDSAVDNM 326

Query: 449 SNPTCYFLWRESIRARFMPEYVVIFKISPLE--------TEYWAKAQEIARTVSP 589
            NP  Y +W + +  R +PEYVV FK   L         T    K   +AR + P
Sbjct: 327 QNPQWYVVWSKDMNTRILPEYVVSFKCPSLHQMQGSSGATSALKKPSPVARDMFP 381


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