BLASTX nr result
ID: Ephedra25_contig00016059
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00016059
(401 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002318331.1| RNA recognition motif-containing family prot... 94 2e-17
gb|EEE61562.1| hypothetical protein OsJ_15917 [Oryza sativa Japo... 92 7e-17
gb|EEC77862.1| hypothetical protein OsI_17125 [Oryza sativa Indi... 92 7e-17
gb|ESW24590.1| hypothetical protein PHAVU_004G143300g [Phaseolus... 92 9e-17
ref|XP_006855610.1| hypothetical protein AMTR_s00044p00073410 [A... 91 1e-16
ref|XP_004246450.1| PREDICTED: RNA-binding motif protein, X chro... 91 1e-16
ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycin... 91 1e-16
ref|XP_004976601.1| PREDICTED: glycine-rich RNA-binding protein-... 90 3e-16
gb|AFK40678.1| unknown [Lotus japonicus] 89 5e-16
ref|XP_006340998.1| PREDICTED: cold-inducible RNA-binding protei... 89 8e-16
ref|XP_004515251.1| PREDICTED: glycine-rich RNA-binding protein ... 89 8e-16
ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protei... 88 1e-15
ref|XP_006478116.1| PREDICTED: glycine-rich RNA-binding protein ... 87 2e-15
ref|XP_006441346.1| hypothetical protein CICLE_v10022555mg [Citr... 86 4e-15
emb|CCI55328.1| PH01B001I13.24 [Phyllostachys edulis] 86 7e-15
ref|XP_006390546.1| hypothetical protein EUTSA_v10019191mg [Eutr... 85 9e-15
ref|XP_004301228.1| PREDICTED: cold-inducible RNA-binding protei... 85 1e-14
ref|XP_002888931.1| RNA recognition motif-containing protein [Ar... 83 4e-14
ref|NP_001151732.1| RNA binding protein [Zea mays] gi|195649405|... 82 6e-14
gb|ABK22494.1| unknown [Picea sitchensis] 82 6e-14
>ref|XP_002318331.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222859004|gb|EEE96551.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 181
Score = 93.6 bits (231), Expect = 2e-17
Identities = 44/77 (57%), Positives = 60/77 (77%)
Frame = -2
Query: 298 KLYVHGISFNSTEDSLRYSFSHFGQVVDVKIINEKISKRPRGFAFVTFXXXXXXXXAIEG 119
KLYV G+SF +TE+SLR +F +FGQ+VDV ++ +K++KRPRGFAF+ + AIEG
Sbjct: 91 KLYVSGLSFRTTEESLRNAFQNFGQLVDVNLVMDKVAKRPRGFAFLRYETEEEAQKAIEG 150
Query: 118 MDGKFLDGRIITVELAR 68
M GKFLDGR+I VE+A+
Sbjct: 151 MHGKFLDGRVIFVEVAK 167
>gb|EEE61562.1| hypothetical protein OsJ_15917 [Oryza sativa Japonica Group]
Length = 149
Score = 92.0 bits (227), Expect = 7e-17
Identities = 42/78 (53%), Positives = 60/78 (76%)
Frame = -2
Query: 298 KLYVHGISFNSTEDSLRYSFSHFGQVVDVKIINEKISKRPRGFAFVTFXXXXXXXXAIEG 119
+LYV G+SF +TE+SLR +F FGQ+ +V ++ E+++KRPRGFAF+++ A+EG
Sbjct: 68 RLYVSGLSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFLSYASEEESKNAMEG 127
Query: 118 MDGKFLDGRIITVELARQ 65
M GKFLDGR+I VE+ARQ
Sbjct: 128 MQGKFLDGRVIFVEVARQ 145
>gb|EEC77862.1| hypothetical protein OsI_17125 [Oryza sativa Indica Group]
Length = 152
Score = 92.0 bits (227), Expect = 7e-17
Identities = 42/78 (53%), Positives = 60/78 (76%)
Frame = -2
Query: 298 KLYVHGISFNSTEDSLRYSFSHFGQVVDVKIINEKISKRPRGFAFVTFXXXXXXXXAIEG 119
+LYV G+SF +TE+SLR +F FGQ+ +V ++ E+++KRPRGFAF+++ A+EG
Sbjct: 71 RLYVSGLSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFLSYASEEESKNAMEG 130
Query: 118 MDGKFLDGRIITVELARQ 65
M GKFLDGR+I VE+ARQ
Sbjct: 131 MQGKFLDGRVIFVEVARQ 148
>gb|ESW24590.1| hypothetical protein PHAVU_004G143300g [Phaseolus vulgaris]
Length = 188
Score = 91.7 bits (226), Expect = 9e-17
Identities = 43/77 (55%), Positives = 60/77 (77%)
Frame = -2
Query: 298 KLYVHGISFNSTEDSLRYSFSHFGQVVDVKIINEKISKRPRGFAFVTFXXXXXXXXAIEG 119
KLYV G+SF +TE+SLR +F +FGQ+V+VK++ ++I+ RPRGFAF+ + AIEG
Sbjct: 97 KLYVSGLSFRTTEESLRNAFKNFGQLVEVKLVMDRIANRPRGFAFLRYATEEESQKAIEG 156
Query: 118 MDGKFLDGRIITVELAR 68
M GKFLDGR+I VE+A+
Sbjct: 157 MHGKFLDGRVIFVEIAK 173
>ref|XP_006855610.1| hypothetical protein AMTR_s00044p00073410 [Amborella trichopoda]
gi|548859397|gb|ERN17077.1| hypothetical protein
AMTR_s00044p00073410 [Amborella trichopoda]
Length = 170
Score = 91.3 bits (225), Expect = 1e-16
Identities = 44/84 (52%), Positives = 62/84 (73%)
Frame = -2
Query: 319 YSQLSFDKLYVHGISFNSTEDSLRYSFSHFGQVVDVKIINEKISKRPRGFAFVTFXXXXX 140
Y + + KLYV G+SF +TE+SLR +F +FGQ+V+VK++ +K + RPRGFAF+ +
Sbjct: 71 YPKAATKKLYVSGLSFRTTEESLRNAFKNFGQLVEVKLVMDKRANRPRGFAFLEYATEEE 130
Query: 139 XXXAIEGMDGKFLDGRIITVELAR 68
AIEGM GKFLDGR+I VE+A+
Sbjct: 131 SRQAIEGMHGKFLDGRVIFVEVAK 154
>ref|XP_004246450.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Solanum
lycopersicum]
Length = 160
Score = 91.3 bits (225), Expect = 1e-16
Identities = 43/80 (53%), Positives = 61/80 (76%)
Frame = -2
Query: 307 SFDKLYVHGISFNSTEDSLRYSFSHFGQVVDVKIINEKISKRPRGFAFVTFXXXXXXXXA 128
S KL+V G+SF +TE+SLR +F+HFG++V+V ++ +KI+ RPRGFAF+ + A
Sbjct: 68 SSTKLFVSGLSFRTTEESLRKTFNHFGELVEVNLMMDKIANRPRGFAFIRYATEEESQKA 127
Query: 127 IEGMDGKFLDGRIITVELAR 68
IEGM GKFLDGR+I VE+A+
Sbjct: 128 IEGMHGKFLDGRVIFVEVAK 147
>ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycine max]
gi|255625921|gb|ACU13305.1| unknown [Glycine max]
Length = 180
Score = 91.3 bits (225), Expect = 1e-16
Identities = 43/77 (55%), Positives = 60/77 (77%)
Frame = -2
Query: 298 KLYVHGISFNSTEDSLRYSFSHFGQVVDVKIINEKISKRPRGFAFVTFXXXXXXXXAIEG 119
KLYV G+SF +TE+SLR +F +FGQ+V+VK++ ++I+ RPRGFAF+ + AIEG
Sbjct: 89 KLYVSGLSFRTTEESLRNAFKNFGQLVEVKLVMDRIANRPRGFAFLRYATEEESQKAIEG 148
Query: 118 MDGKFLDGRIITVELAR 68
M GKFLDGR+I VE+A+
Sbjct: 149 MHGKFLDGRVIFVEVAK 165
>ref|XP_004976601.1| PREDICTED: glycine-rich RNA-binding protein-like [Setaria italica]
Length = 147
Score = 89.7 bits (221), Expect = 3e-16
Identities = 41/78 (52%), Positives = 59/78 (75%)
Frame = -2
Query: 298 KLYVHGISFNSTEDSLRYSFSHFGQVVDVKIINEKISKRPRGFAFVTFXXXXXXXXAIEG 119
+LYVHG+SF +TE+SLR +F FG + +V ++ ++ +KRPRGFAFV++ AIEG
Sbjct: 66 RLYVHGLSFRTTEESLRNAFEKFGDLTEVNLVMDRAAKRPRGFAFVSYADEEQTKTAIEG 125
Query: 118 MDGKFLDGRIITVELARQ 65
M GKFLDGR+I VE+A++
Sbjct: 126 MHGKFLDGRVIFVEVAKR 143
>gb|AFK40678.1| unknown [Lotus japonicus]
Length = 187
Score = 89.4 bits (220), Expect = 5e-16
Identities = 42/77 (54%), Positives = 58/77 (75%)
Frame = -2
Query: 298 KLYVHGISFNSTEDSLRYSFSHFGQVVDVKIINEKISKRPRGFAFVTFXXXXXXXXAIEG 119
+LYV G+SF +TE+SLR F +FGQ+VDV ++ +K++ RPRGFAF+ + AIEG
Sbjct: 95 RLYVSGLSFRTTEESLRNCFKNFGQLVDVNLVMDKLANRPRGFAFLRYATEEESQKAIEG 154
Query: 118 MDGKFLDGRIITVELAR 68
M GKFLDGR+I VE+A+
Sbjct: 155 MHGKFLDGRVIFVEVAK 171
>ref|XP_006340998.1| PREDICTED: cold-inducible RNA-binding protein-like [Solanum
tuberosum]
Length = 163
Score = 88.6 bits (218), Expect = 8e-16
Identities = 42/80 (52%), Positives = 61/80 (76%)
Frame = -2
Query: 307 SFDKLYVHGISFNSTEDSLRYSFSHFGQVVDVKIINEKISKRPRGFAFVTFXXXXXXXXA 128
S KL+V G+SF +TE+SLR +F++FG++V+V ++ +KI+ RPRGFAF+ + A
Sbjct: 68 SSTKLFVSGLSFRTTEESLRKAFNNFGELVEVNLMMDKIANRPRGFAFIRYATEEESQKA 127
Query: 127 IEGMDGKFLDGRIITVELAR 68
IEGM GKFLDGR+I VE+A+
Sbjct: 128 IEGMHGKFLDGRVIFVEVAK 147
>ref|XP_004515251.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Cicer arietinum]
Length = 183
Score = 88.6 bits (218), Expect = 8e-16
Identities = 41/77 (53%), Positives = 58/77 (75%)
Frame = -2
Query: 298 KLYVHGISFNSTEDSLRYSFSHFGQVVDVKIINEKISKRPRGFAFVTFXXXXXXXXAIEG 119
KLYV G+SF +TE+SLR +F +FGQ+V+V ++ +K++ RPRGF F+ + AIEG
Sbjct: 93 KLYVSGLSFRTTEESLRNAFKNFGQLVEVNLVMDKVANRPRGFGFLRYETEEESKKAIEG 152
Query: 118 MDGKFLDGRIITVELAR 68
M GKFLDGR+I VE+A+
Sbjct: 153 MHGKFLDGRVIFVEVAK 169
>ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
gi|296088019|emb|CBI35302.3| unnamed protein product
[Vitis vinifera]
Length = 170
Score = 88.2 bits (217), Expect = 1e-15
Identities = 42/77 (54%), Positives = 58/77 (75%)
Frame = -2
Query: 298 KLYVHGISFNSTEDSLRYSFSHFGQVVDVKIINEKISKRPRGFAFVTFXXXXXXXXAIEG 119
+LYV G+SF +TE+SLR +F FGQ+V+V ++ +KI+ RPRGFAF+ + AIEG
Sbjct: 80 RLYVSGLSFRTTEESLRNAFETFGQLVEVNLVMDKIANRPRGFAFLRYSTEEESEKAIEG 139
Query: 118 MDGKFLDGRIITVELAR 68
M GKFLDGR+I VE+A+
Sbjct: 140 MHGKFLDGRVIFVEVAK 156
>ref|XP_006478116.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X1 [Citrus sinensis]
Length = 171
Score = 87.0 bits (214), Expect = 2e-15
Identities = 41/77 (53%), Positives = 58/77 (75%)
Frame = -2
Query: 298 KLYVHGISFNSTEDSLRYSFSHFGQVVDVKIINEKISKRPRGFAFVTFXXXXXXXXAIEG 119
+L+V G+SF ++EDSLR +F FGQ+V+V ++ +KI+ RPRGFAF+ + AIEG
Sbjct: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
Query: 118 MDGKFLDGRIITVELAR 68
M GKFLDGR+I VE+A+
Sbjct: 139 MHGKFLDGRVIFVEIAK 155
>ref|XP_006441346.1| hypothetical protein CICLE_v10022555mg [Citrus clementina]
gi|567897718|ref|XP_006441347.1| hypothetical protein
CICLE_v10022555mg [Citrus clementina]
gi|557543608|gb|ESR54586.1| hypothetical protein
CICLE_v10022555mg [Citrus clementina]
gi|557543609|gb|ESR54587.1| hypothetical protein
CICLE_v10022555mg [Citrus clementina]
Length = 171
Score = 86.3 bits (212), Expect = 4e-15
Identities = 41/77 (53%), Positives = 58/77 (75%)
Frame = -2
Query: 298 KLYVHGISFNSTEDSLRYSFSHFGQVVDVKIINEKISKRPRGFAFVTFXXXXXXXXAIEG 119
+L+V G+SF ++EDSLR +F FGQ+V+V ++ +KI+ RPRGFAF+ + AIEG
Sbjct: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLMMDKIANRPRGFAFLRYATEEESRRAIEG 138
Query: 118 MDGKFLDGRIITVELAR 68
M GKFLDGR+I VE+A+
Sbjct: 139 MHGKFLDGRVIFVEIAK 155
>emb|CCI55328.1| PH01B001I13.24 [Phyllostachys edulis]
Length = 196
Score = 85.5 bits (210), Expect = 7e-15
Identities = 37/77 (48%), Positives = 59/77 (76%)
Frame = -2
Query: 295 LYVHGISFNSTEDSLRYSFSHFGQVVDVKIINEKISKRPRGFAFVTFXXXXXXXXAIEGM 116
L++ G+SF +TE+SLR +F FGQ+ +V ++ ++++KRPRGFAF+++ A+EGM
Sbjct: 118 LFIEGLSFRTTEESLRSAFERFGQLTEVNLVMDRVAKRPRGFAFLSYANEEESKNAMEGM 177
Query: 115 DGKFLDGRIITVELARQ 65
GKFLDGR+I VE+A++
Sbjct: 178 HGKFLDGRVIFVEVAKR 194
>ref|XP_006390546.1| hypothetical protein EUTSA_v10019191mg [Eutrema salsugineum]
gi|557086980|gb|ESQ27832.1| hypothetical protein
EUTSA_v10019191mg [Eutrema salsugineum]
Length = 187
Score = 85.1 bits (209), Expect = 9e-15
Identities = 41/77 (53%), Positives = 56/77 (72%)
Frame = -2
Query: 298 KLYVHGISFNSTEDSLRYSFSHFGQVVDVKIINEKISKRPRGFAFVTFXXXXXXXXAIEG 119
KLYV G+SF +TED+LR +F FG++V V ++ +K++ RPRGFAF+ + AIEG
Sbjct: 83 KLYVSGLSFRTTEDNLRKAFEQFGKLVFVNLVMDKVANRPRGFAFLRYETEEESMKAIEG 142
Query: 118 MDGKFLDGRIITVELAR 68
M GKFLDGR+I VE A+
Sbjct: 143 MHGKFLDGRVIFVEEAK 159
>ref|XP_004301228.1| PREDICTED: cold-inducible RNA-binding protein-like [Fragaria vesca
subsp. vesca]
Length = 166
Score = 84.7 bits (208), Expect = 1e-14
Identities = 40/77 (51%), Positives = 58/77 (75%)
Frame = -2
Query: 298 KLYVHGISFNSTEDSLRYSFSHFGQVVDVKIINEKISKRPRGFAFVTFXXXXXXXXAIEG 119
KLYV G+SF +TE+SLR +F +FG++V+V ++ ++I+ RPRGFAF+ + AI+G
Sbjct: 74 KLYVSGLSFRTTEESLRNAFQNFGRLVEVNLVMDRIANRPRGFAFLRYETEEESQKAIKG 133
Query: 118 MDGKFLDGRIITVELAR 68
M GKFLDGR+I VE A+
Sbjct: 134 MHGKFLDGRVIFVEEAK 150
>ref|XP_002888931.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297334772|gb|EFH65190.1| RNA recognition
motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 181
Score = 82.8 bits (203), Expect = 4e-14
Identities = 38/77 (49%), Positives = 56/77 (72%)
Frame = -2
Query: 298 KLYVHGISFNSTEDSLRYSFSHFGQVVDVKIINEKISKRPRGFAFVTFXXXXXXXXAIEG 119
KLYV G+SF +TED+LR +F FG+++ + ++ +K++ RPRGFAF+ + AI+G
Sbjct: 78 KLYVSGLSFRTTEDTLRDTFEQFGKLIHMNLVMDKVANRPRGFAFLRYETEEEAMKAIQG 137
Query: 118 MDGKFLDGRIITVELAR 68
M GKFLDGR+I VE A+
Sbjct: 138 MHGKFLDGRVIFVEEAK 154
>ref|NP_001151732.1| RNA binding protein [Zea mays] gi|195649405|gb|ACG44170.1| RNA
binding protein [Zea mays]
Length = 147
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/78 (48%), Positives = 58/78 (74%)
Frame = -2
Query: 298 KLYVHGISFNSTEDSLRYSFSHFGQVVDVKIINEKISKRPRGFAFVTFXXXXXXXXAIEG 119
+LYV G+SF +TE SLR +F FG + +V ++ ++++KRPRGFAF+++ A+EG
Sbjct: 66 RLYVSGLSFRTTERSLRDAFEKFGDLTEVCLVMDRVAKRPRGFAFLSYTGEEEARGAMEG 125
Query: 118 MDGKFLDGRIITVELARQ 65
M GKFLDGR+I VE+A++
Sbjct: 126 MHGKFLDGRVIFVEVAKR 143
>gb|ABK22494.1| unknown [Picea sitchensis]
Length = 178
Score = 82.4 bits (202), Expect = 6e-14
Identities = 42/93 (45%), Positives = 60/93 (64%)
Frame = -2
Query: 298 KLYVHGISFNSTEDSLRYSFSHFGQVVDVKIINEKISKRPRGFAFVTFXXXXXXXXAIEG 119
KLYV G+S+ +TE SLR +FS FG +V+ I+ ++++KR RGFAF+ + AI+G
Sbjct: 83 KLYVSGLSYYTTEQSLRNAFSSFGNLVEATIVMDRVTKRSRGFAFLRYAYEEEAEAAIKG 142
Query: 118 MDGKFLDGRIITVELARQXXXXXXXXXKATGPP 20
M GKFLDGR+I VE ++ K+ GPP
Sbjct: 143 MHGKFLDGRVIFVEYSKLPSELRGAPPKSPGPP 175