BLASTX nr result
ID: Ephedra25_contig00015906
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00015906
(705 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001771533.1| predicted protein [Physcomitrella patens] gi... 89 2e-15
ref|XP_001760431.1| predicted protein [Physcomitrella patens] gi... 86 1e-14
gb|EAY74478.1| hypothetical protein OsI_02369 [Oryza sativa Indi... 83 8e-14
ref|NP_001043295.1| Os01g0549400 [Oryza sativa Japonica Group] g... 83 8e-14
ref|XP_004489252.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 82 1e-13
ref|XP_004968951.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 82 2e-13
ref|XP_002871624.1| ATP binding protein [Arabidopsis lyrata subs... 81 3e-13
ref|XP_003618186.1| DEAD-box ATP-dependent RNA helicase [Medicag... 81 4e-13
ref|XP_003618185.1| DEAD-box ATP-dependent RNA helicase [Medicag... 81 4e-13
ref|XP_006586866.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 80 5e-13
tpg|DAA59016.1| TPA: putative DEAD-box ATP-dependent RNA helicas... 80 5e-13
tpg|DAA59017.1| TPA: putative DEAD-box ATP-dependent RNA helicas... 80 5e-13
ref|NP_001169380.1| uncharacterized protein LOC100383248 [Zea ma... 80 5e-13
ref|XP_006470297.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 80 8e-13
ref|XP_006446540.1| hypothetical protein CICLE_v10014449mg [Citr... 80 8e-13
ref|XP_006399974.1| hypothetical protein EUTSA_v10012853mg [Eutr... 80 8e-13
ref|XP_006287261.1| hypothetical protein CARUB_v10000450mg [Caps... 80 8e-13
ref|XP_006287260.1| hypothetical protein CARUB_v10000450mg [Caps... 80 8e-13
ref|XP_006597682.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 79 1e-12
ref|XP_006597680.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 79 1e-12
>ref|XP_001771533.1| predicted protein [Physcomitrella patens]
gi|162677260|gb|EDQ63733.1| predicted protein
[Physcomitrella patens]
Length = 684
Score = 88.6 bits (218), Expect = 2e-15
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = -1
Query: 405 VAAAAVETAIRFAPADPELPTPWKALVDGSTGYIYYWNPESNVTQYEKPIPXXXXXXP 232
+ AAV A RFAP DP LP PW+ALVDG+TGYIYYWNPE+N+TQY+KP+P P
Sbjct: 1 MVGAAVAAAPRFAPEDPTLPAPWRALVDGNTGYIYYWNPETNITQYDKPLPLAASGPP 58
>ref|XP_001760431.1| predicted protein [Physcomitrella patens]
gi|162688445|gb|EDQ74822.1| predicted protein
[Physcomitrella patens]
Length = 675
Score = 85.9 bits (211), Expect = 1e-14
Identities = 35/58 (60%), Positives = 44/58 (75%)
Frame = -1
Query: 405 VAAAAVETAIRFAPADPELPTPWKALVDGSTGYIYYWNPESNVTQYEKPIPXXXXXXP 232
+ AAV A R+APADP LP PW ALVDG+TGYIYYWNP++N+TQY++P+P P
Sbjct: 1 MVGAAVSAAPRYAPADPTLPPPWTALVDGNTGYIYYWNPDTNITQYDRPLPLVGSGRP 58
>gb|EAY74478.1| hypothetical protein OsI_02369 [Oryza sativa Indica Group]
Length = 792
Score = 83.2 bits (204), Expect = 8e-14
Identities = 33/58 (56%), Positives = 42/58 (72%)
Frame = -1
Query: 405 VAAAAVETAIRFAPADPELPTPWKALVDGSTGYIYYWNPESNVTQYEKPIPXXXXXXP 232
++A A R+AP DP LP PW+ LVDG+TGY+YYWNPE+N+TQYEKP+P P
Sbjct: 1 MSAGTAPAAPRYAPDDPSLPKPWRGLVDGTTGYLYYWNPETNITQYEKPLPPEDQLPP 58
>ref|NP_001043295.1| Os01g0549400 [Oryza sativa Japonica Group]
gi|143455968|sp|Q5JKF2.2|RH40_ORYSJ RecName:
Full=DEAD-box ATP-dependent RNA helicase 40
gi|57899403|dbj|BAD88050.1| putative ATP-dependent RNA
helicase DB10 [Oryza sativa Japonica Group]
gi|113532826|dbj|BAF05209.1| Os01g0549400 [Oryza sativa
Japonica Group] gi|125570769|gb|EAZ12284.1| hypothetical
protein OsJ_02174 [Oryza sativa Japonica Group]
Length = 792
Score = 83.2 bits (204), Expect = 8e-14
Identities = 33/58 (56%), Positives = 42/58 (72%)
Frame = -1
Query: 405 VAAAAVETAIRFAPADPELPTPWKALVDGSTGYIYYWNPESNVTQYEKPIPXXXXXXP 232
++A A R+AP DP LP PW+ LVDG+TGY+YYWNPE+N+TQYEKP+P P
Sbjct: 1 MSAGTAPAAPRYAPDDPSLPKPWRGLVDGTTGYLYYWNPETNITQYEKPLPPEDQLPP 58
>ref|XP_004489252.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like [Cicer
arietinum]
Length = 618
Score = 82.4 bits (202), Expect = 1e-13
Identities = 35/57 (61%), Positives = 45/57 (78%), Gaps = 2/57 (3%)
Frame = -1
Query: 423 ILLVNMVAAAAVETAI--RFAPADPELPTPWKALVDGSTGYIYYWNPESNVTQYEKP 259
I+LV++ AA ++ R+APADP LP PWK LVDG TGY+Y+WNPE+NVTQYE+P
Sbjct: 9 IVLVSLAMAATATASVGPRYAPADPTLPKPWKGLVDGKTGYLYFWNPETNVTQYERP 65
>ref|XP_004968951.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like isoform X1
[Setaria italica]
Length = 806
Score = 81.6 bits (200), Expect = 2e-13
Identities = 33/58 (56%), Positives = 43/58 (74%)
Frame = -1
Query: 405 VAAAAVETAIRFAPADPELPTPWKALVDGSTGYIYYWNPESNVTQYEKPIPXXXXXXP 232
++ ++ A R+AP DP LP PW+ LVDG+TGY+YYWNPE+NVTQYEKP+P P
Sbjct: 1 MSGSSGRAAPRYAPDDPSLPKPWRGLVDGTTGYLYYWNPETNVTQYEKPMPPEDQLPP 58
>ref|XP_002871624.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297317461|gb|EFH47883.1| ATP binding protein
[Arabidopsis lyrata subsp. lyrata]
Length = 713
Score = 81.3 bits (199), Expect = 3e-13
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -1
Query: 405 VAAAAVETAIRFAPADPELPTPWKALVDGSTGYIYYWNPESNVTQYEKP 259
+AA A +AIR+AP DP LP PWK LVD TGY+Y+WNPE+NVTQYE+P
Sbjct: 1 MAATATASAIRYAPEDPNLPKPWKGLVDSRTGYLYFWNPETNVTQYERP 49
>ref|XP_003618186.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355493201|gb|AES74404.1| DEAD-box ATP-dependent RNA
helicase [Medicago truncatula]
Length = 619
Score = 80.9 bits (198), Expect = 4e-13
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = -1
Query: 408 MVAAAAVETAIRFAPADPELPTPWKALVDGSTGYIYYWNPESNVTQYEKP 259
M A A R+APADP LP PWK LVDG TGY+Y+WNPE+NVTQYE+P
Sbjct: 1 MAATATAAVGPRYAPADPTLPKPWKGLVDGKTGYLYFWNPETNVTQYERP 50
>ref|XP_003618185.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355493200|gb|AES74403.1| DEAD-box ATP-dependent RNA
helicase [Medicago truncatula]
Length = 718
Score = 80.9 bits (198), Expect = 4e-13
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = -1
Query: 408 MVAAAAVETAIRFAPADPELPTPWKALVDGSTGYIYYWNPESNVTQYEKP 259
M A A R+APADP LP PWK LVDG TGY+Y+WNPE+NVTQYE+P
Sbjct: 1 MAATATAAVGPRYAPADPTLPKPWKGLVDGKTGYLYFWNPETNVTQYERP 50
>ref|XP_006586866.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like isoform X1
[Glycine max] gi|571476128|ref|XP_006586867.1|
PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like
isoform X2 [Glycine max]
Length = 1165
Score = 80.5 bits (197), Expect = 5e-13
Identities = 35/54 (64%), Positives = 40/54 (74%), Gaps = 2/54 (3%)
Frame = -1
Query: 408 MVAAAAVETAI--RFAPADPELPTPWKALVDGSTGYIYYWNPESNVTQYEKPIP 253
M A A T + R+AP DP LP PWK L+DGSTG +YYWNPE+NVTQYEKP P
Sbjct: 1 MATAEAASTGLGPRYAPDDPTLPQPWKGLIDGSTGLLYYWNPETNVTQYEKPTP 54
>tpg|DAA59016.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 711
Score = 80.5 bits (197), Expect = 5e-13
Identities = 32/50 (64%), Positives = 39/50 (78%)
Frame = -1
Query: 381 AIRFAPADPELPTPWKALVDGSTGYIYYWNPESNVTQYEKPIPXXXXXXP 232
A R+AP DP LP PW+ LVDG+TGY+YYWNPE+NVTQYE+P+P P
Sbjct: 12 APRYAPDDPTLPKPWRGLVDGTTGYLYYWNPETNVTQYERPVPPESQLLP 61
>tpg|DAA59017.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 802
Score = 80.5 bits (197), Expect = 5e-13
Identities = 32/50 (64%), Positives = 39/50 (78%)
Frame = -1
Query: 381 AIRFAPADPELPTPWKALVDGSTGYIYYWNPESNVTQYEKPIPXXXXXXP 232
A R+AP DP LP PW+ LVDG+TGY+YYWNPE+NVTQYE+P+P P
Sbjct: 12 APRYAPDDPTLPKPWRGLVDGTTGYLYYWNPETNVTQYERPVPPESQLLP 61
>ref|NP_001169380.1| uncharacterized protein LOC100383248 [Zea mays]
gi|224029005|gb|ACN33578.1| unknown [Zea mays]
Length = 498
Score = 80.5 bits (197), Expect = 5e-13
Identities = 32/50 (64%), Positives = 39/50 (78%)
Frame = -1
Query: 381 AIRFAPADPELPTPWKALVDGSTGYIYYWNPESNVTQYEKPIPXXXXXXP 232
A R+AP DP LP PW+ LVDG+TGY+YYWNPE+NVTQYE+P+P P
Sbjct: 12 APRYAPDDPTLPKPWRGLVDGATGYLYYWNPETNVTQYERPVPPESQLLP 61
>ref|XP_006470297.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like [Citrus
sinensis]
Length = 703
Score = 79.7 bits (195), Expect = 8e-13
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = -1
Query: 399 AAAVETAIRFAPADPELPTPWKALVDGSTGYIYYWNPESNVTQYEKP 259
A A ++R+AP DP LP PWK LVDG TGY+Y+WNPE+NVTQYE+P
Sbjct: 7 ATATSASVRYAPEDPTLPKPWKGLVDGRTGYLYFWNPETNVTQYERP 53
>ref|XP_006446540.1| hypothetical protein CICLE_v10014449mg [Citrus clementina]
gi|557549151|gb|ESR59780.1| hypothetical protein
CICLE_v10014449mg [Citrus clementina]
Length = 703
Score = 79.7 bits (195), Expect = 8e-13
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = -1
Query: 399 AAAVETAIRFAPADPELPTPWKALVDGSTGYIYYWNPESNVTQYEKP 259
A A ++R+AP DP LP PWK LVDG TGY+Y+WNPE+NVTQYE+P
Sbjct: 7 ATATSASVRYAPEDPTLPKPWKGLVDGRTGYLYFWNPETNVTQYERP 53
>ref|XP_006399974.1| hypothetical protein EUTSA_v10012853mg [Eutrema salsugineum]
gi|557101064|gb|ESQ41427.1| hypothetical protein
EUTSA_v10012853mg [Eutrema salsugineum]
Length = 652
Score = 79.7 bits (195), Expect = 8e-13
Identities = 37/64 (57%), Positives = 44/64 (68%), Gaps = 4/64 (6%)
Frame = -1
Query: 438 LGFRDILLVNM----VAAAAVETAIRFAPADPELPTPWKALVDGSTGYIYYWNPESNVTQ 271
LGF L N+ +AA A IR+AP DP LP PWK LVD TGY+Y+WNPE+NVTQ
Sbjct: 2 LGFSFELSPNLWTLVMAATATAPTIRYAPEDPNLPKPWKGLVDSRTGYLYFWNPETNVTQ 61
Query: 270 YEKP 259
YE+P
Sbjct: 62 YERP 65
>ref|XP_006287261.1| hypothetical protein CARUB_v10000450mg [Capsella rubella]
gi|482555967|gb|EOA20159.1| hypothetical protein
CARUB_v10000450mg [Capsella rubella]
Length = 635
Score = 79.7 bits (195), Expect = 8e-13
Identities = 32/49 (65%), Positives = 39/49 (79%)
Frame = -1
Query: 405 VAAAAVETAIRFAPADPELPTPWKALVDGSTGYIYYWNPESNVTQYEKP 259
+AA A + IR+AP DP LP PWK LVD TGY+Y+WNPE+NVTQYE+P
Sbjct: 1 MAATATASTIRYAPEDPNLPKPWKGLVDSRTGYLYFWNPETNVTQYERP 49
>ref|XP_006287260.1| hypothetical protein CARUB_v10000450mg [Capsella rubella]
gi|482555966|gb|EOA20158.1| hypothetical protein
CARUB_v10000450mg [Capsella rubella]
Length = 595
Score = 79.7 bits (195), Expect = 8e-13
Identities = 32/49 (65%), Positives = 39/49 (79%)
Frame = -1
Query: 405 VAAAAVETAIRFAPADPELPTPWKALVDGSTGYIYYWNPESNVTQYEKP 259
+AA A + IR+AP DP LP PWK LVD TGY+Y+WNPE+NVTQYE+P
Sbjct: 1 MAATATASTIRYAPEDPNLPKPWKGLVDSRTGYLYFWNPETNVTQYERP 49
>ref|XP_006597682.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like isoform X4
[Glycine max]
Length = 1183
Score = 79.3 bits (194), Expect = 1e-12
Identities = 33/49 (67%), Positives = 38/49 (77%)
Frame = -1
Query: 399 AAAVETAIRFAPADPELPTPWKALVDGSTGYIYYWNPESNVTQYEKPIP 253
AA+ R+AP DP LP PWK L+DGSTG +YYWNPE+NVTQYEKP P
Sbjct: 6 AASAGLGPRYAPDDPTLPQPWKGLIDGSTGLLYYWNPETNVTQYEKPTP 54
>ref|XP_006597680.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like isoform X2
[Glycine max] gi|571518369|ref|XP_006597681.1|
PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like
isoform X3 [Glycine max]
Length = 1192
Score = 79.3 bits (194), Expect = 1e-12
Identities = 33/49 (67%), Positives = 38/49 (77%)
Frame = -1
Query: 399 AAAVETAIRFAPADPELPTPWKALVDGSTGYIYYWNPESNVTQYEKPIP 253
AA+ R+AP DP LP PWK L+DGSTG +YYWNPE+NVTQYEKP P
Sbjct: 6 AASAGLGPRYAPDDPTLPQPWKGLIDGSTGLLYYWNPETNVTQYEKPTP 54