BLASTX nr result
ID: Ephedra25_contig00015815
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00015815
(494 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus... 46 5e-10
gb|AAT40504.2| Polyprotein, putative [Solanum demissum] 46 2e-09
ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596... 44 3e-08
gb|AAT38756.2| Putative methyltransferase family protein [Solanu... 44 7e-08
gb|EMT18677.1| Elongation factor Ts [Aegilops tauschii] 42 3e-07
gb|EMT31111.1| Nucleoporin GLE1 [Aegilops tauschii] 41 1e-06
gb|EMS59381.1| Phospholipid-transporting ATPase 2 [Triticum urartu] 40 2e-06
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840... 40 2e-06
ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from ... 40 2e-06
gb|EMS50104.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic... 40 3e-06
gb|EMS62958.1| Putative SWI/SNF-related matrix-associated actin-... 40 3e-06
gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic... 40 3e-06
gb|EMT15916.1| hypothetical protein F775_10666 [Aegilops tauschii] 42 1e-05
>gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus notabilis]
Length = 1770
Score = 46.2 bits (108), Expect(2) = 5e-10
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +2
Query: 362 PVRKSDVVNIDGSARGRGRPKLTWWDIIRKDMVSCGLSEETALN 493
PVR + + I + RGRGRP++TW +++RKD++ GL E N
Sbjct: 1260 PVRAWEDILIPNTRRGRGRPRITWTEVVRKDILDLGLQESLISN 1303
Score = 43.1 bits (100), Expect(2) = 5e-10
Identities = 17/32 (53%), Positives = 25/32 (78%)
Frame = +1
Query: 268 RETLRVALVEDKLRKNQLRWFGHIKCRPLSAP 363
R + VA +EDK+R+ +LRW+GH++ RPL AP
Sbjct: 1229 RSKVGVAPIEDKVREGRLRWYGHVQRRPLEAP 1260
>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
Length = 868
Score = 46.2 bits (108), Expect(2) = 2e-09
Identities = 18/44 (40%), Positives = 32/44 (72%)
Frame = +2
Query: 362 PVRKSDVVNIDGSARGRGRPKLTWWDIIRKDMVSCGLSEETALN 493
PVR+ +V+ ++G+ RGRGRPK W ++IR+D+ ++E+ L+
Sbjct: 636 PVRRCEVMVVEGTRRGRGRPKKYWEEVIRQDLAMLHITEDMTLD 679
Score = 41.2 bits (95), Expect(2) = 2e-09
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +1
Query: 268 RETLRVALVEDKLRKNQLRWFGHIKCRPLSAP 363
RE + VA V DKLR+ +LRWFGH+K R AP
Sbjct: 605 REKVGVASVVDKLREARLRWFGHVKRRSADAP 636
>ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596609 [Solanum tuberosum]
Length = 278
Score = 44.3 bits (103), Expect(2) = 3e-08
Identities = 17/44 (38%), Positives = 31/44 (70%)
Frame = +2
Query: 362 PVRKSDVVNIDGSARGRGRPKLTWWDIIRKDMVSCGLSEETALN 493
PVR+ + + ++G+ RGRGRPK W ++IR+D+ ++E+ L+
Sbjct: 223 PVRRCEGLVVEGTRRGRGRPKKYWGEVIRQDLAQLHITEDMTLD 266
Score = 39.3 bits (90), Expect(2) = 3e-08
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +1
Query: 268 RETLRVALVEDKLRKNQLRWFGHIKCRPLSAP 363
RE + VA V DKLR+ +LRWFGH++ R AP
Sbjct: 192 REKVGVASVVDKLREARLRWFGHVRRRCADAP 223
>gb|AAT38756.2| Putative methyltransferase family protein [Solanum demissum]
Length = 828
Score = 43.5 bits (101), Expect(2) = 7e-08
Identities = 17/43 (39%), Positives = 31/43 (72%)
Frame = +2
Query: 365 VRKSDVVNIDGSARGRGRPKLTWWDIIRKDMVSCGLSEETALN 493
VR+ +V+ ++G+ RGRGRPK W ++IR+D+ ++E+ L+
Sbjct: 54 VRRCEVMVVEGTRRGRGRPKKYWEEVIRQDLAMLHITEDMTLD 96
Score = 38.5 bits (88), Expect(2) = 7e-08
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +1
Query: 268 RETLRVALVEDKLRKNQLRWFGHIKCRPLSA 360
RE + VA V DKLR+ +LRWFGH+K R A
Sbjct: 22 REKVGVASVVDKLREARLRWFGHVKRRSADA 52
>gb|EMT18677.1| Elongation factor Ts [Aegilops tauschii]
Length = 750
Score = 41.6 bits (96), Expect(2) = 3e-07
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = +1
Query: 268 RETLRVALVEDKLRKNQLRWFGHIKCRPLSAP 363
R+ + VAL E+KL +++LRWFGHI+CR AP
Sbjct: 438 RDRVGVALNEEKLVQHRLRWFGHIQCRSPEAP 469
Score = 38.1 bits (87), Expect(2) = 3e-07
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 362 PVRKSDVVNIDGSARGRGRPKLTWWDIIRKDMVSCGLSEETALN 493
PV + D RGRGRP LTW + ++KD+ ++ E A++
Sbjct: 469 PVHSGWLKRADNVKRGRGRPNLTWEESVKKDLKDWSITRELAMD 512
>gb|EMT31111.1| Nucleoporin GLE1 [Aegilops tauschii]
Length = 926
Score = 40.8 bits (94), Expect(2) = 1e-06
Identities = 17/32 (53%), Positives = 25/32 (78%)
Frame = +1
Query: 268 RETLRVALVEDKLRKNQLRWFGHIKCRPLSAP 363
R+ + VA +E+KL +++LRWFGHI+ RP AP
Sbjct: 561 RDRVGVAPIEEKLVQHRLRWFGHIQLRPSEAP 592
Score = 37.0 bits (84), Expect(2) = 1e-06
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 362 PVRKSDVVNIDGSARGRGRPKLTWWDIIRKDMVSCGLSEETALN 493
PV + + D RGRGRP LTW + +R+D+ +++ A++
Sbjct: 592 PVHSGRLKHADNVKRGRGRPNLTWEESVRRDLKDWSITKVLAMD 635
>gb|EMS59381.1| Phospholipid-transporting ATPase 2 [Triticum urartu]
Length = 1134
Score = 39.7 bits (91), Expect(2) = 2e-06
Identities = 17/32 (53%), Positives = 25/32 (78%)
Frame = +1
Query: 268 RETLRVALVEDKLRKNQLRWFGHIKCRPLSAP 363
R+ + VA +E+KL +++LRWFGHI+ RP AP
Sbjct: 739 RDRVGVAPIEEKLVQHRLRWFGHIQRRPPEAP 770
Score = 37.7 bits (86), Expect(2) = 2e-06
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 362 PVRKSDVVNIDGSARGRGRPKLTWWDIIRKDMVSCGLSEETALN 493
PV + + RGRGRP LTW + +++DM +++E A++
Sbjct: 770 PVNSGRLKRAENVKRGRGRPNLTWEESVKRDMKDWSITKELAMD 813
>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
distachyon]
Length = 567
Score = 40.0 bits (92), Expect(2) = 2e-06
Identities = 17/32 (53%), Positives = 25/32 (78%)
Frame = +1
Query: 268 RETLRVALVEDKLRKNQLRWFGHIKCRPLSAP 363
R+ + VA + +KL +++LRWFGHI+ RPL AP
Sbjct: 480 RDRVGVAPIAEKLVQHRLRWFGHIQRRPLDAP 511
Score = 37.4 bits (85), Expect(2) = 2e-06
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 362 PVRKSDVVNIDGSARGRGRPKLTWWDIIRKDMVSCGLSEETALN 493
PV + RGRGRP LTW + +++D+ +++E A+N
Sbjct: 511 PVHSGRLKRAGNVKRGRGRPNLTWEESVKRDLKGWNITKELAMN 554
>ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from mobile element
jockey-like [Brachypodium distachyon]
Length = 307
Score = 40.0 bits (92), Expect(2) = 2e-06
Identities = 17/32 (53%), Positives = 25/32 (78%)
Frame = +1
Query: 268 RETLRVALVEDKLRKNQLRWFGHIKCRPLSAP 363
R+ + VA + +KL +++LRWFGHI+ RPL AP
Sbjct: 220 RDRVGVAPIAEKLVQHRLRWFGHIQRRPLDAP 251
Score = 37.4 bits (85), Expect(2) = 2e-06
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 362 PVRKSDVVNIDGSARGRGRPKLTWWDIIRKDMVSCGLSEETALN 493
PV + RGRGRP LTW + +++D+ +++E A+N
Sbjct: 251 PVHSGRLKRAGNVKRGRGRPNLTWEESVKRDLKGWNITKELAMN 294
>gb|EMS50104.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
Length = 3154
Score = 39.7 bits (91), Expect(2) = 3e-06
Identities = 17/32 (53%), Positives = 25/32 (78%)
Frame = +1
Query: 268 RETLRVALVEDKLRKNQLRWFGHIKCRPLSAP 363
R+ + VA +E+KL +++LRWFGHI+ RP AP
Sbjct: 2394 RDRVGVAPIEEKLVQHRLRWFGHIQRRPPEAP 2425
Score = 36.6 bits (83), Expect(2) = 3e-06
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 362 PVRKSDVVNIDGSARGRGRPKLTWWDIIRKDMVSCGLSEETALN 493
PV + + RGRGRP LTW + +++D+ +++E A++
Sbjct: 2425 PVHSGRLKRAENVKRGRGRPNLTWEESVKRDLKDWSITKELAMD 2468
>gb|EMS62958.1| Putative SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 3-like 1
[Triticum urartu]
Length = 1028
Score = 39.7 bits (91), Expect(2) = 3e-06
Identities = 17/32 (53%), Positives = 25/32 (78%)
Frame = +1
Query: 268 RETLRVALVEDKLRKNQLRWFGHIKCRPLSAP 363
R+ + VA +E+KL +++LRWFGHI+ RP AP
Sbjct: 680 RDRVGVAPIEEKLVQHRLRWFGHIQRRPPEAP 711
Score = 36.6 bits (83), Expect(2) = 3e-06
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 362 PVRKSDVVNIDGSARGRGRPKLTWWDIIRKDMVSCGLSEETALN 493
PV + + RGRGRP LTW + +++D+ +++E A++
Sbjct: 711 PVHSGRLKRAENVKRGRGRPNLTWEESVKRDLKDWSITKELAMD 754
>gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
Length = 882
Score = 39.7 bits (91), Expect(2) = 3e-06
Identities = 17/32 (53%), Positives = 25/32 (78%)
Frame = +1
Query: 268 RETLRVALVEDKLRKNQLRWFGHIKCRPLSAP 363
R+ + VA +E+KL +++LRWFGHI+ RP AP
Sbjct: 428 RDRVGVAPIEEKLVQHRLRWFGHIQHRPPEAP 459
Score = 36.6 bits (83), Expect(2) = 3e-06
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 362 PVRKSDVVNIDGSARGRGRPKLTWWDIIRKDMVSCGLSEETALN 493
PV + + RGRGRP LTW + +++D+ +++E A++
Sbjct: 459 PVHSGRLKRAENVKRGRGRPNLTWEESVKRDLKDWSITKELAMD 502
>gb|EMT15916.1| hypothetical protein F775_10666 [Aegilops tauschii]
Length = 498
Score = 42.4 bits (98), Expect(2) = 1e-05
Identities = 18/32 (56%), Positives = 26/32 (81%)
Frame = +1
Query: 268 RETLRVALVEDKLRKNQLRWFGHIKCRPLSAP 363
R+ + VA +E+KL +++LRWFGHI+ RPL AP
Sbjct: 434 RDRVGVAPIEEKLVQHRLRWFGHIQRRPLEAP 465
Score = 32.3 bits (72), Expect(2) = 1e-05
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 362 PVRKSDVVNIDGSARGRGRPKLTWWDIIRKD 454
PV + D RGRGRP LTW + +++D
Sbjct: 465 PVHSGWLKRADNVKRGRGRPNLTWEESVKRD 495