BLASTX nr result
ID: Ephedra25_contig00014970
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00014970
(417 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago a... 273 1e-71
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ... 273 1e-71
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ... 273 1e-71
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ... 273 1e-71
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ... 273 1e-71
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ... 272 4e-71
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ... 271 5e-71
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ... 271 7e-71
gb|AAX19931.1| viral replicase [Nandina mosaic virus] 269 2e-70
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1... 258 6e-67
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi... 239 3e-61
ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mo... 207 2e-51
gb|ADE10202.1| viral replicase [Hydrangea ringspot virus] 204 1e-50
ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|5... 204 1e-50
ref|NP_044330.1| replicase [Papaya mosaic virus] gi|139137|sp|P2... 189 3e-46
gb|ACO35593.1| RNA-dependent RNA polymerase [Alternanthera mosai... 184 1e-44
gb|ACS28233.1| replicase [Alternanthera mosaic virus] 184 1e-44
gb|ACS28228.1| replicase [Alternanthera mosaic virus] 184 1e-44
ref|YP_459944.1| replicase [Alternanthera mosaic virus] gi|62082... 182 4e-44
ref|NP_077079.1| replicase [Clover yellow mosaic virus] 177 2e-42
>gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 711
Score = 273 bits (699), Expect = 1e-71
Identities = 134/138 (97%), Positives = 136/138 (98%)
Frame = -3
Query: 415 SKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPS 236
SKL PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPS
Sbjct: 100 SKLPPATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPS 159
Query: 235 LMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 56
LMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHF+NS
Sbjct: 160 LMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINS 219
Query: 55 NAQSSAFWEKLEATPYLK 2
NAQSSAFWEKLEATPYLK
Sbjct: 220 NAQSSAFWEKLEATPYLK 237
>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 273 bits (699), Expect = 1e-71
Identities = 134/138 (97%), Positives = 136/138 (98%)
Frame = -3
Query: 415 SKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPS 236
SKL PAT IFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPS
Sbjct: 769 SKLPPATAIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPS 828
Query: 235 LMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 56
L+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS
Sbjct: 829 LVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 888
Query: 55 NAQSSAFWEKLEATPYLK 2
NAQSSAFWEKLEATPYLK
Sbjct: 889 NAQSSAFWEKLEATPYLK 906
>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 273 bits (699), Expect = 1e-71
Identities = 134/138 (97%), Positives = 136/138 (98%)
Frame = -3
Query: 415 SKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPS 236
SKL PAT IFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPS
Sbjct: 769 SKLPPATAIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPS 828
Query: 235 LMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 56
L+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS
Sbjct: 829 LVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 888
Query: 55 NAQSSAFWEKLEATPYLK 2
NAQSSAFWEKLEATPYLK
Sbjct: 889 NAQSSAFWEKLEATPYLK 906
>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 273 bits (699), Expect = 1e-71
Identities = 134/138 (97%), Positives = 136/138 (98%)
Frame = -3
Query: 415 SKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPS 236
SKL PAT IFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPS
Sbjct: 769 SKLPPATAIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPS 828
Query: 235 LMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 56
L+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS
Sbjct: 829 LVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 888
Query: 55 NAQSSAFWEKLEATPYLK 2
NAQSSAFWEKLEATPYLK
Sbjct: 889 NAQSSAFWEKLEATPYLK 906
>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 273 bits (699), Expect = 1e-71
Identities = 134/138 (97%), Positives = 136/138 (98%)
Frame = -3
Query: 415 SKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPS 236
SKL PAT IFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPS
Sbjct: 769 SKLPPATAIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPS 828
Query: 235 LMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 56
L+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS
Sbjct: 829 LVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 888
Query: 55 NAQSSAFWEKLEATPYLK 2
NAQSSAFWEKLEATPYLK
Sbjct: 889 NAQSSAFWEKLEATPYLK 906
>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 272 bits (695), Expect = 4e-71
Identities = 133/138 (96%), Positives = 136/138 (98%)
Frame = -3
Query: 415 SKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPS 236
SKL PAT IFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQP+PG+HLLVPS
Sbjct: 769 SKLPPATAIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPRPGLHLLVPS 828
Query: 235 LMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 56
L+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS
Sbjct: 829 LVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 888
Query: 55 NAQSSAFWEKLEATPYLK 2
NAQSSAFWEKLEATPYLK
Sbjct: 889 NAQSSAFWEKLEATPYLK 906
>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 271 bits (694), Expect = 5e-71
Identities = 133/138 (96%), Positives = 135/138 (97%)
Frame = -3
Query: 415 SKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPS 236
SKL PAT IFSELSRYYINATHRNSKFLANKLGVYSSN CPLKVTYGFQPQPG+HLLVPS
Sbjct: 769 SKLPPATAIFSELSRYYINATHRNSKFLANKLGVYSSNPCPLKVTYGFQPQPGLHLLVPS 828
Query: 235 LMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 56
L+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS
Sbjct: 829 LVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 888
Query: 55 NAQSSAFWEKLEATPYLK 2
NAQSSAFWEKLEATPYLK
Sbjct: 889 NAQSSAFWEKLEATPYLK 906
>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 271 bits (693), Expect = 7e-71
Identities = 133/138 (96%), Positives = 135/138 (97%)
Frame = -3
Query: 415 SKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPS 236
SKL PAT IFSELSRYYINATHRNSK LANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPS
Sbjct: 769 SKLPPATAIFSELSRYYINATHRNSKLLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPS 828
Query: 235 LMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 56
L+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS
Sbjct: 829 LVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 888
Query: 55 NAQSSAFWEKLEATPYLK 2
NAQSSAFWEKLEATPYLK
Sbjct: 889 NAQSSAFWEKLEATPYLK 906
>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
Length = 1368
Score = 269 bits (688), Expect = 2e-70
Identities = 131/138 (94%), Positives = 135/138 (97%)
Frame = -3
Query: 415 SKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPS 236
SKL+PATT FSELSRYYINATHRNSKFLANKLG+YSSN CPLKVTYGFQPQPG+HLLVPS
Sbjct: 757 SKLSPATTTFSELSRYYINATHRNSKFLANKLGIYSSNHCPLKVTYGFQPQPGLHLLVPS 816
Query: 235 LMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 56
L+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDS HFVNS
Sbjct: 817 LVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSNHFVNS 876
Query: 55 NAQSSAFWEKLEATPYLK 2
NAQSSAFWEKLEATPYLK
Sbjct: 877 NAQSSAFWEKLEATPYLK 894
>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
replication protein; AltName: Full=156 kDa protein;
AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
[Plantago asiatica mosaic virus]
Length = 1385
Score = 258 bits (659), Expect = 6e-67
Identities = 126/138 (91%), Positives = 132/138 (95%)
Frame = -3
Query: 415 SKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPS 236
SKL PATTI+S SRYYINAT RNSKFLANKLGVYS+NSCPL VTYGFQP PG+HLLVPS
Sbjct: 774 SKLPPATTIYSAFSRYYINATLRNSKFLANKLGVYSANSCPLNVTYGFQPLPGLHLLVPS 833
Query: 235 LMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 56
LMKKAAFTDAGHKVS+YAGCQGITAP+VQILLDNDTTMCTKEVLYTALSRAVDSIHFVN+
Sbjct: 834 LMKKAAFTDAGHKVSSYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNT 893
Query: 55 NAQSSAFWEKLEATPYLK 2
NAQSSAFWEKLEATPYLK
Sbjct: 894 NAQSSAFWEKLEATPYLK 911
>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
[Tulip virus X]
Length = 1361
Score = 239 bits (610), Expect = 3e-61
Identities = 116/138 (84%), Positives = 127/138 (92%)
Frame = -3
Query: 415 SKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPS 236
++L PAT IFS L RYYINATHRN K LANKLGVYSSN PL V+YGF+P+PG+HLLVPS
Sbjct: 750 AQLEPATKIFSALCRYYINATHRNVKELANKLGVYSSNPSPLHVSYGFRPEPGLHLLVPS 809
Query: 235 LMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 56
L+KKAAF DAGHKVSTYAGCQGITAP+VQILLD+DTTMC+ EVLYTALSRAVDSIHF+NS
Sbjct: 810 LVKKAAFADAGHKVSTYAGCQGITAPKVQILLDSDTTMCSSEVLYTALSRAVDSIHFINS 869
Query: 55 NAQSSAFWEKLEATPYLK 2
NAQSSAFWEKLEATPYLK
Sbjct: 870 NAQSSAFWEKLEATPYLK 887
>ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mosaic virus]
gi|773405|gb|AAC54775.1| ORF 1; putative RNA dependent
RNA polymerase [Cassava common mosaic virus]
gi|1587823|prf||2207297A ORF 1
Length = 1449
Score = 207 bits (526), Expect = 2e-51
Identities = 100/138 (72%), Positives = 120/138 (86%)
Frame = -3
Query: 415 SKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPS 236
++L P+T IFS+ SRYYINATHRN+K LAN LGVYS N+ LK+T+GFQP +HLLVPS
Sbjct: 844 AQLEPSTQIFSQFSRYYINATHRNAKKLANMLGVYSDNNKELKITHGFQPIKDIHLLVPS 903
Query: 235 LMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 56
L+KKAAF++AGHK STYAGCQGITA ++QILLD++T MC++EVLYTALSRAVDSIHF+N+
Sbjct: 904 LIKKAAFSEAGHKTSTYAGCQGITARKLQILLDSNTPMCSQEVLYTALSRAVDSIHFINT 963
Query: 55 NAQSSAFWEKLEATPYLK 2
SS FWEKLEATPYLK
Sbjct: 964 APTSSNFWEKLEATPYLK 981
>gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]
Length = 1386
Score = 204 bits (518), Expect = 1e-50
Identities = 98/138 (71%), Positives = 113/138 (81%)
Frame = -3
Query: 415 SKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPS 236
S+LAPAT +F L RYYINATHRN + LANKL VYS K+T GFQP +HLLVPS
Sbjct: 776 SQLAPATEVFQPLCRYYINATHRNKRDLANKLEVYSEKEGETKITMGFQPIKDLHLLVPS 835
Query: 235 LMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 56
L+KK+A+ + GHKVSTYAGCQGITAP++QILLDNDT MC+KEVLYTALSRAV SIHF+N+
Sbjct: 836 LLKKSAYGEMGHKVSTYAGCQGITAPKIQILLDNDTVMCSKEVLYTALSRAVHSIHFINT 895
Query: 55 NAQSSAFWEKLEATPYLK 2
S+FWEKLEATPYLK
Sbjct: 896 GPTHSSFWEKLEATPYLK 913
>ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|56792005|gb|AAW30448.1|
viral replicase [Hydrangea ringspot virus]
Length = 1386
Score = 204 bits (518), Expect = 1e-50
Identities = 98/138 (71%), Positives = 113/138 (81%)
Frame = -3
Query: 415 SKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPS 236
S+LAPAT +F L RYYINATHRN + LANKL VYS K+T GFQP +HLLVPS
Sbjct: 776 SQLAPATEVFQPLCRYYINATHRNKRDLANKLEVYSEKEGETKITMGFQPIKDLHLLVPS 835
Query: 235 LMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 56
L+KK+A+ + GHKVSTYAGCQGITAP++QILLDNDT MC+KEVLYTALSRAV SIHF+N+
Sbjct: 836 LLKKSAYGEMGHKVSTYAGCQGITAPKIQILLDNDTVMCSKEVLYTALSRAVHSIHFINT 895
Query: 55 NAQSSAFWEKLEATPYLK 2
S+FWEKLEATPYLK
Sbjct: 896 GPTHSSFWEKLEATPYLK 913
>ref|NP_044330.1| replicase [Papaya mosaic virus] gi|139137|sp|P20951.1|RDRP_PMV
RecName: Full=RNA replication protein; AltName: Full=176
kDa protein; AltName: Full=ORF1 protein; Includes:
RecName: Full=RNA-directed RNA polymerase; Includes:
RecName: Full=Helicase gi|222331|dbj|BAA03050.1| unnamed
protein product [Papaya mosaic virus]
gi|409915202|gb|AFV46461.1| replicase [Papaya mosaic
virus]
Length = 1547
Score = 189 bits (480), Expect = 3e-46
Identities = 91/138 (65%), Positives = 110/138 (79%)
Frame = -3
Query: 415 SKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPS 236
S + P SEL RYYINATHRN K LANKLGVYS + +VT+G P PG+H+LVPS
Sbjct: 931 SSIEPLVKEASELCRYYINATHRNKKDLANKLGVYSEKTGLTEVTHGTTPIPGLHMLVPS 990
Query: 235 LMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 56
L KK AF++ GHKVSTYAGCQGITAP++QILL +T++C++EVLYTALSRAV SIHFVN+
Sbjct: 991 LYKKQAFSEMGHKVSTYAGCQGITAPKIQILLTEETSLCSREVLYTALSRAVHSIHFVNA 1050
Query: 55 NAQSSAFWEKLEATPYLK 2
+ + AFW+KLE TPYLK
Sbjct: 1051 SPNNQAFWKKLECTPYLK 1068
>gb|ACO35593.1| RNA-dependent RNA polymerase [Alternanthera mosaic virus]
Length = 1541
Score = 184 bits (467), Expect = 1e-44
Identities = 90/138 (65%), Positives = 107/138 (77%)
Frame = -3
Query: 415 SKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPS 236
S + P T + SRYYINATHRN + LANKLGVYS + +T G P PG+HLLVPS
Sbjct: 925 SLIEPFTLEADKYSRYYINATHRNKRDLANKLGVYSEVTGITSITQGNHPVPGLHLLVPS 984
Query: 235 LMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 56
L KK AF++ GHKVSTYAGCQG+TAPRVQILL +T+MC++EV+YTALSRAV SIHFVN
Sbjct: 985 LYKKQAFSEMGHKVSTYAGCQGLTAPRVQILLSEETSMCSREVIYTALSRAVHSIHFVNC 1044
Query: 55 NAQSSAFWEKLEATPYLK 2
+ + AFW KLE+TPYLK
Sbjct: 1045 SPNNQAFWAKLESTPYLK 1062
>gb|ACS28233.1| replicase [Alternanthera mosaic virus]
Length = 1541
Score = 184 bits (466), Expect = 1e-44
Identities = 90/138 (65%), Positives = 106/138 (76%)
Frame = -3
Query: 415 SKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPS 236
S + P T + SRYYINATHRN + LANKLGVYS + +T G P PG+HLLVPS
Sbjct: 925 SLIEPFTLEADKYSRYYINATHRNKRDLANKLGVYSEVTGITSITQGNHPVPGLHLLVPS 984
Query: 235 LMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 56
L KK AF++ GHKVSTYAGCQG+TAPRVQILL +T+MC++EV+YTALSRAV SIHFVN
Sbjct: 985 LYKKEAFSEMGHKVSTYAGCQGLTAPRVQILLSEETSMCSREVIYTALSRAVHSIHFVNC 1044
Query: 55 NAQSSAFWEKLEATPYLK 2
+ AFW KLE+TPYLK
Sbjct: 1045 GPNNQAFWAKLESTPYLK 1062
>gb|ACS28228.1| replicase [Alternanthera mosaic virus]
Length = 1541
Score = 184 bits (466), Expect = 1e-44
Identities = 90/138 (65%), Positives = 106/138 (76%)
Frame = -3
Query: 415 SKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPS 236
S + P T + SRYYINATHRN + LANKLGVYS + +T G P PG+HLLVPS
Sbjct: 925 SLIEPFTLEADKYSRYYINATHRNKRDLANKLGVYSEVTGITSITQGNHPVPGLHLLVPS 984
Query: 235 LMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 56
L KK AF++ GHKVSTYAGCQG+TAPRVQILL +T+MC++EV+YTALSRAV SIHFVN
Sbjct: 985 LYKKEAFSEMGHKVSTYAGCQGLTAPRVQILLSEETSMCSREVIYTALSRAVHSIHFVNC 1044
Query: 55 NAQSSAFWEKLEATPYLK 2
+ AFW KLE+TPYLK
Sbjct: 1045 GPNNQAFWAKLESTPYLK 1062
>ref|YP_459944.1| replicase [Alternanthera mosaic virus] gi|62082367|gb|AAX62019.1|
replicase [Alternanthera mosaic virus]
Length = 1541
Score = 182 bits (462), Expect = 4e-44
Identities = 89/138 (64%), Positives = 105/138 (76%)
Frame = -3
Query: 415 SKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPS 236
S + P T + SRYYINATHRN + LANKLGVYS + +T G P PG+HLLVPS
Sbjct: 925 SLIEPFTLEADKYSRYYINATHRNKRDLANKLGVYSEVTGITSITQGNHPVPGLHLLVPS 984
Query: 235 LMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 56
L KK AF++ GHK STYAGCQG+TAPRVQILL +T+MC++EV+YTALSRAV SIHFVN
Sbjct: 985 LYKKQAFSEMGHKASTYAGCQGLTAPRVQILLSEETSMCSREVIYTALSRAVHSIHFVNC 1044
Query: 55 NAQSSAFWEKLEATPYLK 2
+ AFW KLE+TPYLK
Sbjct: 1045 GPNNQAFWAKLESTPYLK 1062
>ref|NP_077079.1| replicase [Clover yellow mosaic virus]
Length = 1670
Score = 177 bits (448), Expect = 2e-42
Identities = 83/136 (61%), Positives = 108/136 (79%)
Frame = -3
Query: 409 LAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLM 230
L+ +T FS+ SRYYINATHRN + LA LGVYS + ++ +P+P HLLVPSL+
Sbjct: 1067 LSKSTEHFSQFSRYYINATHRNKQDLARFLGVYSEKTGLTSISMSSRPEPDWHLLVPSLI 1126
Query: 229 KKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNA 50
KK ++T+ G+K STYAGCQGITA RVQ+LLD DTT+C+ +VLYTALSRAV ++HF+N++A
Sbjct: 1127 KKRSYTEMGYKTSTYAGCQGITADRVQVLLDTDTTLCSDQVLYTALSRAVHAVHFINTSA 1186
Query: 49 QSSAFWEKLEATPYLK 2
SSAFW+KL +TPYLK
Sbjct: 1187 TSSAFWDKLNSTPYLK 1202