BLASTX nr result
ID: Ephedra25_contig00014850
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00014850
(765 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera] 135 2e-29
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera] 135 2e-29
emb|CBI37296.3| unnamed protein product [Vitis vinifera] 132 2e-28
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi... 126 7e-27
gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768... 126 7e-27
gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana] 126 7e-27
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera] 125 1e-26
pir||E84492 probable retroelement pol polyprotein [imported] - A... 125 2e-26
gb|AAM15219.1| putative retroelement pol polyprotein [Arabidopsi... 125 2e-26
emb|CAB75932.1| putative protein [Arabidopsis thaliana] 124 5e-26
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera] 122 1e-25
gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsi... 122 1e-25
pir||S00954 pol polyprotein - fruit fly (Drosophila melanogaster... 122 1e-25
gb|EFA05312.1| hypothetical protein TcasGA2_TC015470 [Tribolium ... 122 2e-25
emb|CAN77122.1| hypothetical protein VITISV_013624 [Vitis vinifera] 122 2e-25
ref|XP_002064813.1| GK15001 [Drosophila willistoni] gi|194160898... 121 2e-25
emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera] 121 2e-25
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 120 4e-25
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera] 120 4e-25
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 120 4e-25
>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
Length = 1274
Score = 135 bits (340), Expect = 2e-29
Identities = 86/248 (34%), Positives = 134/248 (54%), Gaps = 9/248 (3%)
Frame = -3
Query: 718 WFLDSYCNSHMIGNKEIFTNFRISYGEKFIKIVGEERLPVKGFGDITQNFGNNKI-ILID 542
WFLDS C++HM G K +F S+ K +K+ ++++ V+G G + N G+ + +L +
Sbjct: 306 WFLDSGCSNHMTGIKSLFKELDESHKLK-VKLGDDKQVXVEGKGIMAVNNGHGNVKLLYN 364
Query: 541 ALYVEGL*KNIISLYKLPTQKYMFAFQKNNGQTCY--RNSYNQKIVAEGIEQNGLFVMKP 368
++ L +N++S+ +L Y F +G TC +Q IV + N LF ++
Sbjct: 365 VYFIPSLTQNLLSVGQLMVSGYSILF---DGATCVIKDKKSDQIIVNVRMAANKLFPLEV 421
Query: 367 ILTE---CFLTNTEISNLWHNRLGHINNEYLWKVGA--VSHGPKKLLPTKMCSSCITAKL 203
E + T SNLWH R GH+N + L + + G K+ +C CI K
Sbjct: 422 SSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKIDSVNVCEGCIYGKQ 481
Query: 202 HKKPFNSG-TEISTKCLEIIHSDLCGPITPPTTHGKSYILTFIDDYSKMTWTFILK*KSE 26
KKPF G + ++ CLEIIH+DLCGP+ + G Y L F DD+S+M+W + L+ K+E
Sbjct: 482 SKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHSRMSWVYFLQSKAE 541
Query: 25 VFESFVKF 2
FE+F KF
Sbjct: 542 TFETFKKF 549
>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
Length = 1472
Score = 135 bits (340), Expect = 2e-29
Identities = 86/248 (34%), Positives = 133/248 (53%), Gaps = 9/248 (3%)
Frame = -3
Query: 718 WFLDSYCNSHMIGNKEIFTNFRISYGEKFIKIVGEERLPVKGFGDITQNFGNNKI-ILID 542
WFLDS C++HM G K +F S+ K +K+ ++++ V+G G N G+ + +L +
Sbjct: 291 WFLDSGCSNHMTGIKSLFKELDESHKLK-VKLGDDKQVQVEGKGTXAVNNGHGNVKLLYN 349
Query: 541 ALYVEGL*KNIISLYKLPTQKYMFAFQKNNGQTCY--RNSYNQKIVAEGIEQNGLFVMKP 368
++ L +N++S+ +L Y F +G TC +Q IV + N LF ++
Sbjct: 350 VYFIPSLTQNLLSVGQLMVSGYSILF---DGATCVIKDKKSDQIIVBVRMAANKLFPLEV 406
Query: 367 ILTE---CFLTNTEISNLWHNRLGHINNEYLWKVGA--VSHGPKKLLPTKMCSSCITAKL 203
E + T SNLWH R GH+N + L + + G K+ +C CI K
Sbjct: 407 SSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKIDSVNVCEGCIYGKQ 466
Query: 202 HKKPFNSG-TEISTKCLEIIHSDLCGPITPPTTHGKSYILTFIDDYSKMTWTFILK*KSE 26
KKPF G + ++ CLEIIH+DLCGP+ + G Y L F DD+S+M+W + L+ K+E
Sbjct: 467 SKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHSRMSWVYFLQSKAE 526
Query: 25 VFESFVKF 2
FE+F KF
Sbjct: 527 TFETFKKF 534
>emb|CBI37296.3| unnamed protein product [Vitis vinifera]
Length = 3048
Score = 132 bits (331), Expect = 2e-28
Identities = 81/256 (31%), Positives = 134/256 (52%), Gaps = 9/256 (3%)
Frame = -3
Query: 742 NKDFNKDGWFLDSYCNSHMIGNKEIFTNFRISYGEKFIKIVGEERLPVKGFGDITQNFGN 563
NK +D WFLDS C++HM G K+ F++F ++ + +K+ + V G G++
Sbjct: 312 NKTSREDTWFLDSGCSNHMCGKKDYFSDFDGTFRDS-VKLGNNTSMSVLGKGNVRLKVNE 370
Query: 562 NKIILIDALYVEGL*KNIISLYKLPTQKYMFAFQKNNGQTCYRNSYNQKIVAEGIEQNGL 383
I+ YV L N++S+ +L + FQ +G+ +S I+ + N +
Sbjct: 371 MTQIITGVFYVPELKNNLLSIGQLQEKGLTILFQ--HGKCKVFHSQKGLIMDTKMSSNRM 428
Query: 382 FVM----KPILTECFLTNTE-ISNLWHNRLGHINNEYLWKVGA---VSHGPKKLLPTKMC 227
F++ +PI + CF T TE I LWH R GH++ + L + V+ P+ P+K+C
Sbjct: 429 FMLYALSQPISSTCFNTVTEDILQLWHCRYGHLSFQGLKTLQQRKMVNGLPQFQPPSKLC 488
Query: 226 SSCITAKLHKKPFNSGTEI-STKCLEIIHSDLCGPITPPTTHGKSYILTFIDDYSKMTWT 50
C+ K H+ + + + L+++H+D+CGPI P + K Y+LTF DD+S+ TW
Sbjct: 489 KDCLVGKQHRSSIPKKSNWRAAEILQLVHADICGPINPISNSKKRYLLTFTDDFSRKTWV 548
Query: 49 FILK*KSEVFESFVKF 2
+ L KSE F F F
Sbjct: 549 YFLVEKSEAFAVFKSF 564
>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
thaliana]
Length = 1334
Score = 126 bits (317), Expect = 7e-27
Identities = 79/262 (30%), Positives = 135/262 (51%), Gaps = 17/262 (6%)
Frame = -3
Query: 736 DFNKDGWFLDSYCNSHMIGNKEIFTNFRISYGEKFIKIVGEERLPVKGFGDITQNFGNNK 557
D K WFLDS C++HM G +E F + + +++ + R+ V+G G +
Sbjct: 291 DEEKQIWFLDSGCSNHMCGTREWFLELDSGFKQN-VRLGDDRRMAVEGKGKLRLEVDGRI 349
Query: 556 IILIDALYVEGL*KNIISLYKLPTQKYMFAFQKNNGQTC--YRNSYNQKIVAEGIEQNGL 383
++ D +V GL N+ S+ +L + F + G C + + + ++ + +N +
Sbjct: 350 QVISDVYFVPGLKNNLFSVGQLQQKGLRFIIE---GDVCEVWHKTEKRMVMHSTMTKNRM 406
Query: 382 FVMKPIL--------TECFLTNTEISNLWHNRLGHINNEYLWKVGA---VSHGPKKLLPT 236
FV+ + T C + +N+WH R GH+N++ L + V PK L
Sbjct: 407 FVVFAAVKKSKETEETRCLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGE 466
Query: 235 K--MCSSCITAKLHKK--PFNSGTEISTKCLEIIHSDLCGPITPPTTHGKSYILTFIDDY 68
+ +C C+ K ++ P S + ST+ L+++H+D+CGPI P +T GK YIL FIDD+
Sbjct: 467 EEAVCDICLKGKQIRESIPKESAWK-STQVLQLVHTDICGPINPASTSGKRYILNFIDDF 525
Query: 67 SKMTWTFILK*KSEVFESFVKF 2
S+ WT++L KSE F+ F +F
Sbjct: 526 SRKCWTYLLSEKSETFQFFKEF 547
>gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis thaliana]
Length = 1334
Score = 126 bits (317), Expect = 7e-27
Identities = 79/262 (30%), Positives = 135/262 (51%), Gaps = 17/262 (6%)
Frame = -3
Query: 736 DFNKDGWFLDSYCNSHMIGNKEIFTNFRISYGEKFIKIVGEERLPVKGFGDITQNFGNNK 557
D K WFLDS C++HM G +E F + + +++ + R+ V+G G +
Sbjct: 291 DEEKQIWFLDSGCSNHMCGTREWFLELDSGFKQN-VRLGDDRRMAVEGKGKLRLEVDGRI 349
Query: 556 IILIDALYVEGL*KNIISLYKLPTQKYMFAFQKNNGQTC--YRNSYNQKIVAEGIEQNGL 383
++ D +V GL N+ S+ +L + F + G C + + + ++ + +N +
Sbjct: 350 QVISDVYFVPGLKNNLFSVGQLQQKGLRFIIE---GDVCEVWHKTEKRMVMHSTMTKNRM 406
Query: 382 FVMKPIL--------TECFLTNTEISNLWHNRLGHINNEYLWKVGA---VSHGPKKLLPT 236
FV+ + T C + +N+WH R GH+N++ L + V PK L
Sbjct: 407 FVVFAAVKKSKETEETRCLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGE 466
Query: 235 K--MCSSCITAKLHKK--PFNSGTEISTKCLEIIHSDLCGPITPPTTHGKSYILTFIDDY 68
+ +C C+ K ++ P S + ST+ L+++H+D+CGPI P +T GK YIL FIDD+
Sbjct: 467 EEAVCDICLKGKQIRESIPKESAWK-STQVLQLVHTDICGPINPASTSGKRYILNFIDDF 525
Query: 67 SKMTWTFILK*KSEVFESFVKF 2
S+ WT++L KSE F+ F +F
Sbjct: 526 SRKCWTYLLSEKSETFQFFKEF 547
>gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana]
Length = 1207
Score = 126 bits (317), Expect = 7e-27
Identities = 79/262 (30%), Positives = 135/262 (51%), Gaps = 17/262 (6%)
Frame = -3
Query: 736 DFNKDGWFLDSYCNSHMIGNKEIFTNFRISYGEKFIKIVGEERLPVKGFGDITQNFGNNK 557
D K WFLDS C++HM G +E F + + +++ + R+ V+G G +
Sbjct: 196 DEEKQIWFLDSGCSNHMCGTREWFLELDSGFKQN-VRLGDDRRMAVEGKGKLRLEVDGRI 254
Query: 556 IILIDALYVEGL*KNIISLYKLPTQKYMFAFQKNNGQTC--YRNSYNQKIVAEGIEQNGL 383
++ D +V GL N+ S+ +L + F + G C + + + ++ + +N +
Sbjct: 255 QVISDVYFVPGLKNNLFSVGQLQQKGLRFIIE---GDVCEVWHKTEKRMVMHSTMTKNRM 311
Query: 382 FVMKPIL--------TECFLTNTEISNLWHNRLGHINNEYLWKVGA---VSHGPKKLLPT 236
FV+ + T C + +N+WH R GH+N++ L + V PK L
Sbjct: 312 FVVFAAVKKSKETEETRCLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGE 371
Query: 235 K--MCSSCITAKLHKK--PFNSGTEISTKCLEIIHSDLCGPITPPTTHGKSYILTFIDDY 68
+ +C C+ K ++ P S + ST+ L+++H+D+CGPI P +T GK YIL FIDD+
Sbjct: 372 EEAVCDICLKGKQIRESIPKESAWK-STQVLQLVHTDICGPINPASTSGKRYILNFIDDF 430
Query: 67 SKMTWTFILK*KSEVFESFVKF 2
S+ WT++L KSE F+ F +F
Sbjct: 431 SRKCWTYLLSEKSETFQFFKEF 452
>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
Length = 1109
Score = 125 bits (315), Expect = 1e-26
Identities = 80/238 (33%), Positives = 127/238 (53%), Gaps = 9/238 (3%)
Frame = -3
Query: 718 WFLDSYCNSHMIGNKEIFTNFRISYGEKFIKIVGEERLPVKGFGDITQNFGNNKI-ILID 542
WFLDS C++HM G K +F S+ K +K+ ++++ V+G G + N G+ + +L +
Sbjct: 292 WFLDSGCSNHMTGIKSLFKELDESHKLK-VKLGDDKQVXVEGKGTVAVNNGHGNVKLLYN 350
Query: 541 ALYVEGL*KNIISLYKLPTQKYMFAFQKNNGQTCY--RNSYNQKIVAEGIEQNGLFVMKP 368
++ L +N++S+ +L Y F +G TC ++Q IV + N LF ++
Sbjct: 351 VYFIPSLTQNLLSVGQLMVSGYSILF---DGSTCVIKDKKFDQIIVDVRMAANKLFPLEV 407
Query: 367 ILTE---CFLTNTEISNLWHNRLGHINNEYLWKVGA--VSHGPKKLLPTKMCSSCITAKL 203
E + T SNLWH R GH+N + L + + G K+ +C CI K
Sbjct: 408 SSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKIDSVNVCEGCIYGKQ 467
Query: 202 HKKPFNSG-TEISTKCLEIIHSDLCGPITPPTTHGKSYILTFIDDYSKMTWTFILK*K 32
KKPF G + ++ CLEIIH+DLCGP+ + G Y L F DD+S+M+W + L+ K
Sbjct: 468 SKKPFPKGRSRRASSCLEIIHADLCGPMQIASFGGSRYFLLFTDDHSRMSWVYFLQSK 525
>pir||E84492 probable retroelement pol polyprotein [imported] - Arabidopsis
thaliana
Length = 531
Score = 125 bits (313), Expect = 2e-26
Identities = 83/258 (32%), Positives = 133/258 (51%), Gaps = 8/258 (3%)
Frame = -3
Query: 751 FFTNKDFNKDGWFLDSYCNSHMIGNKEIFTNFRISYGEKFIKIVGEERLPVKGFGDITQN 572
F TN D ++ W+LD+ ++HM G++ F S K I+ + R+ +KG G I
Sbjct: 162 FETNVD-GENVWYLDNGASNHMTGDRRYFDKMDHSITGK-IRFGDDSRIDIKGKGTIAFI 219
Query: 571 FGNNKI-ILIDALYVEGL*KNIISLYKLPTQKYMFAFQKNNGQTCYRNSYNQKIVAEGIE 395
N K +++D ++ L NIISL + + +G + + +V
Sbjct: 220 DLNGKPRVMLDVYFIPELKSNIISLGQATESGCEIKLK--DGYLTMHDQEGKLLVKAERS 277
Query: 394 QNGLFVMKPILTE---CFLTNTEISNLWHNRLGHINNEYLWKV---GAVSHGPKKLLPTK 233
+N L+ +K L + +LT+T +S+LWH R+GH++ L + + P ++ ++
Sbjct: 278 RNSLYKVKMGLRKEACLYLTSTSMSSLWHARMGHVSLITLKSMIDKELIQGAPSLVIESE 337
Query: 232 MCSSCITAKLHKKPFNSGTEI-STKCLEIIHSDLCGPITPPTTHGKSYILTFIDDYSKMT 56
+C SC+ K ++ F T +TK LE+IH DLCGPITP T+ G YI IDDYS+
Sbjct: 338 VCGSCLLGKQTRQSFPQATVFRATKKLELIHGDLCGPITPKTSVGNRYIFVLIDDYSRYM 397
Query: 55 WTFILK*KSEVFESFVKF 2
WT +LK K + F F F
Sbjct: 398 WTVLLKEKGDAFFKFKNF 415
>gb|AAM15219.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 767
Score = 125 bits (313), Expect = 2e-26
Identities = 83/258 (32%), Positives = 133/258 (51%), Gaps = 8/258 (3%)
Frame = -3
Query: 751 FFTNKDFNKDGWFLDSYCNSHMIGNKEIFTNFRISYGEKFIKIVGEERLPVKGFGDITQN 572
F TN D ++ W+LD+ ++HM G++ F S K I+ + R+ +KG G I
Sbjct: 59 FETNVD-GENVWYLDNGASNHMTGDRRYFDKMDHSITGK-IRFGDDSRIDIKGKGTIAFI 116
Query: 571 FGNNKI-ILIDALYVEGL*KNIISLYKLPTQKYMFAFQKNNGQTCYRNSYNQKIVAEGIE 395
N K +++D ++ L NIISL + + +G + + +V
Sbjct: 117 DLNGKPRVMLDVYFIPELKSNIISLGQATESGCEIKLK--DGYLTMHDQEGKLLVKAERS 174
Query: 394 QNGLFVMKPILTE---CFLTNTEISNLWHNRLGHINNEYLWKV---GAVSHGPKKLLPTK 233
+N L+ +K L + +LT+T +S+LWH R+GH++ L + + P ++ ++
Sbjct: 175 RNSLYKVKMGLRKEACLYLTSTSMSSLWHARMGHVSLITLKSMIDKELIQGAPSLVIESE 234
Query: 232 MCSSCITAKLHKKPFNSGTEI-STKCLEIIHSDLCGPITPPTTHGKSYILTFIDDYSKMT 56
+C SC+ K ++ F T +TK LE+IH DLCGPITP T+ G YI IDDYS+
Sbjct: 235 VCGSCLLGKQTRQSFPQATVFRATKKLELIHGDLCGPITPKTSVGNRYIFVLIDDYSRYM 294
Query: 55 WTFILK*KSEVFESFVKF 2
WT +LK K + F F F
Sbjct: 295 WTVLLKEKGDAFFKFKNF 312
>emb|CAB75932.1| putative protein [Arabidopsis thaliana]
Length = 1339
Score = 124 bits (310), Expect = 5e-26
Identities = 82/250 (32%), Positives = 130/250 (52%), Gaps = 11/250 (4%)
Frame = -3
Query: 718 WFLDSYCNSHMIGNKEIFTNFRISYGEKFIKIVGEERLPVKGFGDITQNFGNNKIILIDA 539
WFLDS C++HM G+KE F+ + + +K+ + R+ V G G + ++ +
Sbjct: 300 WFLDSGCSNHMTGSKEWFSELEEGFN-RTVKLGNDTRMSVVGKGSVKVKVNGVTQVIPEV 358
Query: 538 LYVEGL*KNIISLYKLPTQKYMFAFQKNNGQTCYRNSYNQKIVAEGIEQNGLFVM---KP 368
YV L N++SL +L Q+ A +G + I+ + N +F + KP
Sbjct: 359 YYVPELRNNLLSLGQL--QERGLAILIRDGTCKVYHPSKGAIMETNMSGNRMFFLLASKP 416
Query: 367 ILTECFLTNTEI----SNLWHNRLGHINNEYLWKVG--AVSHGPKKLLPTK-MCSSCITA 209
L E+ ++LWH R GH+N E L + + G L TK +C+ C+T
Sbjct: 417 QKNSLCLQTEEVMDKENHLWHCRFGHLNQEGLKLLAHKKMVIGLPILKATKEICAICLTG 476
Query: 208 KLHKKPFNSGTEI-STKCLEIIHSDLCGPITPPTTHGKSYILTFIDDYSKMTWTFILK*K 32
K H++ + T S+ L+++HSD+CGPITP + GK YIL+FIDD+++ TW + L K
Sbjct: 477 KQHRESMSKKTSWKSSTQLQLVHSDICGPITPISHSGKRYILSFIDDFTRKTWVYFLHEK 536
Query: 31 SEVFESFVKF 2
SE F +F F
Sbjct: 537 SEAFATFKIF 546
>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
Length = 1285
Score = 122 bits (307), Expect = 1e-25
Identities = 89/271 (32%), Positives = 133/271 (49%), Gaps = 32/271 (11%)
Frame = -3
Query: 718 WFLDSYCNSHMIGNKEIFTNFR-ISYGEKFIKIVGEERLPVKGFGDITQNFGNNKII-LI 545
W +DS +H+ + + F R +S GE I + + V G+I NF NN+I+ L
Sbjct: 261 WCVDSGATNHVCNSLQGFQETRQLSKGEVNIFLGDGTEVAVLAVGNIALNFKNNRILSLK 320
Query: 544 DALYVEGL*KNIISLYKLPTQKYMFAFQKNNGQTCYRNSYNQKIVAEGIEQ--------N 389
+ LYV + +N+IS+ L KN C+ Y+ +V + EQ +
Sbjct: 321 NVLYVPSIRRNLISVSSL---------SKNGYSVCFNEFYDDSVVIKFREQIICSGSLID 371
Query: 388 GLFVMKPILTECFLTNTEISN-------------------LWHNRLGHINNE---YLWKV 275
GL+++K + E LTN+E++N LWH RLGHIN + L K
Sbjct: 372 GLYILK-VTPELQLTNSEVNNFDIVAPLKRKCPIELSYTYLWHLRLGHINLDRISLLVKD 430
Query: 274 GAVSHGPKKLLPTKMCSSCITAKLHKKPFNSGTEISTKCLEIIHSDLCGPITPPTTHGKS 95
G +S + LPT C SC+ K+ +PF + LE+IHSDLCGP++ G
Sbjct: 431 GPLSSLKVEALPT--CESCLEGKMTNRPFPLKGNRANDVLELIHSDLCGPMSVQARGGFE 488
Query: 94 YILTFIDDYSKMTWTFILK*KSEVFESFVKF 2
Y +TF DYS+ + ++L+ KSE FE F F
Sbjct: 489 YFVTFTYDYSRYGYIYLLRRKSECFEKFKAF 519
>gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 822
Score = 122 bits (307), Expect = 1e-25
Identities = 82/245 (33%), Positives = 124/245 (50%), Gaps = 6/245 (2%)
Frame = -3
Query: 718 WFLDSYCNSHMIGNKEIFTNFRISYGEKFIKIVGEERLPVKGFGDITQNFGNNKIILIDA 539
W +DS C +HM N+++FT + I++ + +G GDI +K + D
Sbjct: 30 WLIDSGCTNHMTPNEKLFTKINRDFKVP-IRVGNGAVMMSEGKGDIEVMTRKDKRGIRDV 88
Query: 538 LYVEGL*KNIISLYKLPTQKYMFAFQKNNGQTCYRNSYNQKIVAEGIEQNGLFVMKPILT 359
L V L KN++S+ ++ Y + N C + +K + E N F ++ +
Sbjct: 89 LLVPKLGKNLLSVPQMIINGYQVTLKNNY---CTIHDSARKKIGEVEMVNKSFHLRWLSN 145
Query: 358 E--CFLTNTEISNLWHNRLGHI---NNEYLWKVGAVSHGPKKLLPTKMCSSCITAKLHKK 194
E + E + LWH RLGH N + L V+ PK + C SCI +K +
Sbjct: 146 EETAMVAKDEATELWHKRLGHTGHSNLKILQSKEMVTGLPKFNVEEGKCESCILSKHSRD 205
Query: 193 PFNSGTEISTKC-LEIIHSDLCGPITPPTTHGKSYILTFIDDYSKMTWTFILK*KSEVFE 17
PF +E K LE+IHSD+CGP+ + +G YILTFIDD ++M W + LK KSEVF+
Sbjct: 206 PFPKESETRAKHKLELIHSDVCGPMQNSSINGSRYILTFIDDATRMVWVYFLKAKSEVFQ 265
Query: 16 SFVKF 2
+F KF
Sbjct: 266 TFKKF 270
>pir||S00954 pol polyprotein - fruit fly (Drosophila melanogaster) transposon
1731 gi|8702|emb|CAA30503.1| unnamed protein product
[Drosophila melanogaster]
Length = 982
Score = 122 bits (306), Expect = 1e-25
Identities = 78/249 (31%), Positives = 123/249 (49%), Gaps = 5/249 (2%)
Frame = -3
Query: 733 FNKDGWFLDSYCNSHMIGNKEIFTNFRISYGEKFIKIVGEERLPVKGFGDITQNFGNNKI 554
F K W LDS SHM ++ +FT F + EK I + G L KG G + +
Sbjct: 8 FGKTQWCLDSGATSHMCCDRSVFTEFE-EHTEK-ISLAGNGFLLAKGIGTVKLKTDLCTL 65
Query: 553 ILIDALYVEGL*KNIISLYKLPTQKYMFAFQKNNGQTCYRNSYNQKIVAEGIEQNGLFVM 374
+L + L+V L N +S+ + K F + +++ G L++
Sbjct: 66 VLNNVLFVPDLNGNFMSVSRAAQYKCFVNFGPHYADVIQEGERILRVMRAG----NLYMF 121
Query: 373 KPILTECFLTNTEISNLWHNRLGHINNEYLWKV--GAVSHGPKKLL--PTKMCSSCITAK 206
+ CF +LWH R GH+N L ++ + +G +K++ P +C +C+ AK
Sbjct: 122 QGKHNSCFAAVDADGSLWHKRNGHLNTSSLQEMVRKKMVYGVEKVVFKPDAVCKTCMLAK 181
Query: 205 LHKKPFNSGTEI-STKCLEIIHSDLCGPITPPTTHGKSYILTFIDDYSKMTWTFILK*KS 29
+H +PF T + + L++IHSDLCGP + P+ G Y LTFIDD S+ + + L+ K
Sbjct: 182 IHVQPFPKTTRSRAEELLDMIHSDLCGPFSTPSLAGSKYFLTFIDDKSRRIFVYFLRKKD 241
Query: 28 EVFESFVKF 2
EVF FV+F
Sbjct: 242 EVFTKFVEF 250
>gb|EFA05312.1| hypothetical protein TcasGA2_TC015470 [Tribolium castaneum]
Length = 2375
Score = 122 bits (305), Expect = 2e-25
Identities = 81/258 (31%), Positives = 131/258 (50%), Gaps = 19/258 (7%)
Frame = -3
Query: 718 WFLDSYCNSHMIGNKEIFTNFR-ISYGEKFIKIVGEERLPVKGFGDITQNFGNNKII--- 551
W++DS HM+ +KE TN R + K +L GD+ N +
Sbjct: 268 WYVDSGATDHMVNSKEHLTNVRKLESPVKICVAKDNVKLLATEIGDVNAVLRVNNTVTRA 327
Query: 550 -LIDALYVEGL*KNIISLYKLPTQKYMFAFQKNNGQTCYRNSYNQKIVAEGIEQNGLF-V 377
+ + LYV+ L N++S+ K+ +F+ +G+ + N K++AEG + L+ +
Sbjct: 328 TIKNVLYVKNLKHNLLSVQKIELASLNVSFE--HGKVVIKR--NSKVLAEGKRIDNLYEI 383
Query: 376 MKPILTECFLTNTEISN------LWHNRLGHINNEYLWK------VGAVSHGPKKLLPTK 233
+ +C + + + LWH RLGH++N+ L V ++ ++
Sbjct: 384 CFEVENKCKVVCSNVCEVSASLKLWHRRLGHLSNKNLVTLSKNNMVSGLNIRNSNCNESQ 443
Query: 232 MCSSCITAKLHKKPFNSGTEI-STKCLEIIHSDLCGPITPPTTHGKSYILTFIDDYSKMT 56
+C C+ +K+ K PF ++ +T+ LE+IHSDLCGPITP T GK Y LTF+DDY+
Sbjct: 444 ICEVCVKSKITKLPFGKRSDNKTTRVLELIHSDLCGPITPETHDGKRYFLTFLDDYTHFC 503
Query: 55 WTFILK*KSEVFESFVKF 2
++LK KSEVFE F F
Sbjct: 504 VVYLLKSKSEVFEYFKCF 521
>emb|CAN77122.1| hypothetical protein VITISV_013624 [Vitis vinifera]
Length = 1269
Score = 122 bits (305), Expect = 2e-25
Identities = 79/246 (32%), Positives = 130/246 (52%), Gaps = 7/246 (2%)
Frame = -3
Query: 718 WFLDSYCNSHMIGNKEIFTNFRISYGEKFIKIVGEERLPVKGFGDITQNFGNNKIILIDA 539
W +DS C SHM + IFT+ S K +K+ E + KG G I + I+ +
Sbjct: 316 WLIDSGCTSHMTKHLSIFTSIDRSVQPK-VKLGNGEVVQAKGKGTIAISTKRGTKIVTNV 374
Query: 538 LYVEGL*KNIISLYKLPTQKYMFAFQKNNGQTCYRNSYNQKIVAEGIEQNG-LFVMKPIL 362
LY+ L +N++S+ ++ Y +F++N C+ + + +A+ I+ NG F +K L
Sbjct: 375 LYIPDLDQNLLSVAQMLRNGYAVSFKEN---FCFISDVHGTKIAK-IKMNGNSFYLKLDL 430
Query: 361 TECFLTNTEI--SNLWHNRLGHINNE---YLWKVGAVSHGPKKLLPTKMCSSCITAKLHK 197
E + + +I S +WH R GH N + ++ + G V P+ + + C SC K +
Sbjct: 431 VEGHVFSAKIDESVVWHKRYGHFNLKSLRFMQEAGMVEDMPEISVNAQTCESCELGKQQR 490
Query: 196 KPFNSG-TEISTKCLEIIHSDLCGPITPPTTHGKSYILTFIDDYSKMTWTFILK*KSEVF 20
+PF ++ +T LE+IHSD+CGP++ + Y FIDD+S+MTW + LK KS+V
Sbjct: 491 QPFPQNMSKRATHKLELIHSDICGPMSTTSLSNNVYFALFIDDFSRMTWVYFLKTKSQVL 550
Query: 19 ESFVKF 2
F F
Sbjct: 551 SMFKSF 556
>ref|XP_002064813.1| GK15001 [Drosophila willistoni] gi|194160898|gb|EDW75799.1| GK15001
[Drosophila willistoni]
Length = 1249
Score = 121 bits (304), Expect = 2e-25
Identities = 76/251 (30%), Positives = 128/251 (50%), Gaps = 5/251 (1%)
Frame = -3
Query: 739 KDFNKDGWFLDSYCNSHMIGNKEIFTNFRISYGEKFIKIVGEERLPVKGFGDITQNFGNN 560
++ ++ W LDS SHM +K +F++F + + EK I + L +G G +T G
Sbjct: 262 ENMKREKWCLDSGATSHMCCDKSMFSDFSV-HDEK-ISLADAGYLRAEGKGKVTIRTGIC 319
Query: 559 KIILIDALYVEGL*KNIISLYKLPTQKYMFAFQKNNGQTCYRNSYNQKIVAEGIEQNGLF 380
K+ + + LYV GL N +S+ ++ + F+K+ + N + + + + LF
Sbjct: 320 KLTMNNVLYVPGLAGNFMSVARVIEYNSVVHFEKHMAKIIQ----NGECILKAKKIGNLF 375
Query: 379 VMKPILTECFLTNTEISNLWHNRLGHINNEYLWKVGAVSH----GPKKLLPTKMCSSCIT 212
V + F E +LWH R GH+N + L ++ + P C +C+
Sbjct: 376 VFEAESENLFAAVGEDVSLWHKRFGHLNYKSLTQIASKGLVRGLSVTNFAPNTPCKTCMV 435
Query: 211 AKLHKKPFNSGTEI-STKCLEIIHSDLCGPITPPTTHGKSYILTFIDDYSKMTWTFILK* 35
+K+H +PF TE S++ L+++HSD+CGP + G Y LTFIDD S+ + + LK
Sbjct: 436 SKIHVQPFPKMTESRSSELLQLVHSDVCGPFGTKSLGGSRYFLTFIDDKSRRIFVYFLKG 495
Query: 34 KSEVFESFVKF 2
K EVF F++F
Sbjct: 496 KDEVFGKFLEF 506
>emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera]
Length = 1291
Score = 121 bits (304), Expect = 2e-25
Identities = 79/246 (32%), Positives = 129/246 (52%), Gaps = 7/246 (2%)
Frame = -3
Query: 718 WFLDSYCNSHMIGNKEIFTNFRISYGEKFIKIVGEERLPVKGFGDITQNFGNNKIILIDA 539
W +DS C SHM + IFT+ S K +K+ E + KG G I + I +
Sbjct: 330 WLIDSGCTSHMTKHLSIFTSIDRSVQPK-VKLGNGEVVQAKGKGTIAISTKKGTKIXTNV 388
Query: 538 LYVEGL*KNIISLYKLPTQKYMFAFQKNNGQTCYRNSYNQKIVAEGIEQNG-LFVMKPIL 362
LY+ L +N++S+ ++ Y +F++N C+ + + +A+ I+ NG F +K L
Sbjct: 389 LYIPDLDQNLLSVAQMLRNGYAISFKEN---FCFISDVHGTEIAK-IKMNGNSFYLKLDL 444
Query: 361 TECFLTNTEI--SNLWHNRLGHINNE---YLWKVGAVSHGPKKLLPTKMCSSCITAKLHK 197
E + + +I S +WH R GH N + ++ + G V P+ + + C SC K +
Sbjct: 445 VEGHVFSAKIDESVVWHKRYGHFNLKSLRFMQEAGMVEDMPEISVNAQTCESCELGKQQR 504
Query: 196 KPFNSG-TEISTKCLEIIHSDLCGPITPPTTHGKSYILTFIDDYSKMTWTFILK*KSEVF 20
+PF ++ +T LE+IHSD+CGP++ + Y FIDD+S+MTW + LK KS+V
Sbjct: 505 QPFPQNMSKRATHKLELIHSDICGPMSTTSLSNNVYFALFIDDFSRMTWVYFLKTKSQVL 564
Query: 19 ESFVKF 2
F F
Sbjct: 565 SMFKSF 570
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 120 bits (302), Expect = 4e-25
Identities = 83/247 (33%), Positives = 124/247 (50%), Gaps = 8/247 (3%)
Frame = -3
Query: 718 WFLDSYCNSHMIGNKEIFTNFRISYGEKFIKIVGEERLPVKGFGDITQNFGNNKIILI-D 542
W+LDS ++HM G K +F S + + E ++ VKG G+I N I +
Sbjct: 335 WYLDSGASNHMCGRKSMFAELDESVRGN-VALGDESKMEVKGKGNILIRLKNGDHQFISN 393
Query: 541 ALYVEGL*KNIISLYKLPTQKYMFAFQKNNGQTCYRNSYNQKIVAEGIEQNGLFVM--KP 368
Y+ + NI+SL +L + Y + NN R+ + I + +N +FV+ +
Sbjct: 394 VYYIPSMKTNILSLGQLLEKGYDIRLKDNN--LSIRDQESNLITKVPMSKNRMFVLNIRN 451
Query: 367 ILTECF-LTNTEISNLWHNRLGHINN---EYLWKVGAVSHGPKKLLPTKMCSSCITAKLH 200
+ +C + E S LWH R GH+N E L + V P P ++C C+ K
Sbjct: 452 DIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQF 511
Query: 199 KKPF-NSGTEISTKCLEIIHSDLCGPITPPTTHGKSYILTFIDDYSKMTWTFILK*KSEV 23
K F + + K LE+IH+D+CGPI P + +Y L FIDD+S+ TW + LK KSEV
Sbjct: 512 KMSFPKESSSRAQKSLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEV 571
Query: 22 FESFVKF 2
FE F KF
Sbjct: 572 FEIFKKF 578
>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
Length = 1430
Score = 120 bits (302), Expect = 4e-25
Identities = 82/247 (33%), Positives = 125/247 (50%), Gaps = 8/247 (3%)
Frame = -3
Query: 718 WFLDSYCNSHMIGNKEIFTNFRISYGEKFIKIVGEERLPVKGFGDITQNFGNNKI-ILID 542
WFLDS C++HM G K +F S+ + +K+ + ++ V+G G + N G+ + +L +
Sbjct: 433 WFLDSGCSNHMTGIKSLFKELDESH-KLXVKLGDDXQVQVEGKGTVAVNNGHGNVKLLYN 491
Query: 541 ALYVEGL*KNIISLYKLPTQKYMFAFQKNNGQTCYRNSYNQKIVAEGIEQNGLFVMKPIL 362
++ L + ++ G T Y +Q IV + N LF ++
Sbjct: 492 VYFIPSLTEKLVKC----------------GAT-YDKKSDQIIVDVRMAANKLFPLEVSS 534
Query: 361 TE---CFLTNTEISNLWHNRLGHINNE---YLWKVGAVSHGPKKLLPTKMCSSCITAKLH 200
E + T SNLWH R GH+N + L K V PK + +C CI K
Sbjct: 535 IEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFELPK-IDSVNVCEGCIYGKQS 593
Query: 199 KKPFNSG-TEISTKCLEIIHSDLCGPITPPTTHGKSYILTFIDDYSKMTWTFILK*KSEV 23
KKPF G + ++ CLEIIH+DLCGP+ + G Y L F DD+S+M+W + L+ K+E
Sbjct: 594 KKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHSRMSWVYFLQSKAET 653
Query: 22 FESFVKF 2
FE+F KF
Sbjct: 654 FETFKKF 660
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 120 bits (302), Expect = 4e-25
Identities = 86/256 (33%), Positives = 128/256 (50%), Gaps = 10/256 (3%)
Frame = -3
Query: 739 KDFNKDG--WFLDSYCNSHMIGNKEIFTNFRISYGEKFIKIVGEERLPVKGFGDITQNFG 566
KD K+ W+LDS ++HM G K +F S + + E ++ VKG G+I
Sbjct: 326 KDEQKENHKWYLDSGASNHMCGRKSMFAELDESVRGN-VALGDESKMEVKGKGNILIRLK 384
Query: 565 NNKIILI-DALYVEGL*KNIISLYKLPTQKYMFAFQKNNGQTCYRNSYNQKIVAEGIEQN 389
N I + Y+ + NI+SL +L + Y + NN R+ + I + +N
Sbjct: 385 NGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNN--LSIRDQESNLITKVPMSKN 442
Query: 388 GLFVM--KPILTECF-LTNTEISNLWHNRLGHINN---EYLWKVGAVSHGPKKLLPTKMC 227
+FV+ + + +C + E S LWH R GH+N E L + V P P ++C
Sbjct: 443 RMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVC 502
Query: 226 SSCITAKLHKKPF-NSGTEISTKCLEIIHSDLCGPITPPTTHGKSYILTFIDDYSKMTWT 50
C+ K K F + + K LE+IH+D+CGPI P + +Y L FIDD+S+ TW
Sbjct: 503 EGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWV 562
Query: 49 FILK*KSEVFESFVKF 2
+ LK KSEVFE F KF
Sbjct: 563 YFLKEKSEVFEIFKKF 578