BLASTX nr result

ID: Ephedra25_contig00014663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00014663
         (473 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_008937858.1| protein of unknown function [Magnetospirillu...    49   1e-09
ref|XP_003588355.1| Mitochondrial protein, putative [Medicago tr...    49   2e-06

>ref|YP_008937858.1| protein of unknown function [Magnetospirillum gryphiswaldense MSR-1
           v2] gi|568205844|ref|WP_024080208.1| hypothetical
           protein [Magnetospirillum gryphiswaldense]
           gi|78033430|emb|CAJ30045.1| conserved hypothetical
           protein [Magnetospirillum gryphiswaldense MSR-1]
           gi|566555979|emb|CDK99198.1| protein of unknown function
           [Magnetospirillum gryphiswaldense MSR-1 v2]
          Length = 259

 Score = 49.3 bits (116), Expect(2) = 1e-09
 Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
 Frame = -3

Query: 300 LAFHP*PQVIPVFCHIRGFGPTMQL-DGSTCSWLDRSVSG 184
           +AFHP PQ+IP F + RGFGP + +   STC W+D SVSG
Sbjct: 1   MAFHPYPQIIPDFFNRRGFGPPVGVTPPSTCPWIDHSVSG 40



 Score = 38.9 bits (89), Expect(2) = 1e-09
 Identities = 20/42 (47%), Positives = 24/42 (57%)
 Frame = -2

Query: 127 SLTHYAKGTPFHLRKKGYDWMARIGFEGSVALPYHGFFSPFP 2
           SLTHY KGTP   ++       R    G+V+LP  G FSPFP
Sbjct: 69  SLTHYTKGTPSPFKRA--PTACRHSVSGTVSLPLSGCFSPFP 108


>ref|XP_003588355.1| Mitochondrial protein, putative [Medicago truncatula]
           gi|355477403|gb|AES58606.1| Mitochondrial protein,
           putative [Medicago truncatula]
          Length = 1106

 Score = 48.9 bits (115), Expect(2) = 2e-06
 Identities = 22/24 (91%), Positives = 22/24 (91%)
 Frame = -2

Query: 301 VGLSPLATSHPRILPHTWVRSYHA 230
           VGLSPLATSHPRILPHTWVRS  A
Sbjct: 844 VGLSPLATSHPRILPHTWVRSSKA 867



 Score = 28.5 bits (62), Expect(2) = 2e-06
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -1

Query: 353 VRSTAIDFAVNQLSPIL 303
           +RST IDFA NQL PIL
Sbjct: 827 IRSTEIDFAENQLYPIL 843


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