BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00014610
         (2508 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006853567.1| hypothetical protein AMTR_s00032p00242160 [A...   476   e-131
ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citr...   449   e-123
ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein...   447   e-122
ref|XP_006392066.1| hypothetical protein EUTSA_v10023338mg [Eutr...   447   e-122
ref|XP_002888111.1| At1g61040/T7P1_17 [Arabidopsis lyrata subsp....   447   e-122
ref|XP_002305685.1| plus-3 domain-containing family protein [Pop...   447   e-122
ref|XP_002519028.1| RNA polymerase-associated protein RTF1, puta...   445   e-122
gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao...   444   e-122
ref|NP_176299.1| Paf1C-like transcription factor [Arabidopsis th...   444   e-122
gb|AAM10312.1| At1g61040/T7P1_17 [Arabidopsis thaliana]               444   e-122
ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein...   440   e-120
ref|XP_002316628.2| plus-3 domain-containing family protein [Pop...   439   e-120
ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein...   437   e-119
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein...   436   e-119
ref|XP_006300844.1| hypothetical protein CARUB_v10019938mg [Caps...   436   e-119
gb|ESW31293.1| hypothetical protein PHAVU_002G226300g [Phaseolus...   436   e-119
ref|XP_004302289.1| PREDICTED: RNA polymerase-associated protein...   430   e-117
gb|EXB82802.1| RNA polymerase-associated protein RTF1-like prote...   429   e-117
ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein...   428   e-117
gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus pe...   423   e-115

>ref|XP_006853567.1| hypothetical protein AMTR_s00032p00242160 [Amborella trichopoda]
            gi|548857220|gb|ERN15034.1| hypothetical protein
            AMTR_s00032p00242160 [Amborella trichopoda]
          Length = 624

 Score =  476 bits (1224), Expect = e-131
 Identities = 288/635 (45%), Positives = 380/635 (59%), Gaps = 18/635 (2%)
 Frame = -2

Query: 2222 DLENLFLECAGRSMSLDGHQDNSKTR-KRRPSFSDSENGSDSNKYSEPDDSDQDDEMPNL 2046
            DLE+L LE AGR+ S  G +  S+T+ KRR   S S++GSD    SE DD       P+ 
Sbjct: 5    DLEHLLLEAAGRT-STSGRKKPSQTQPKRRHEGSYSDDGSDPKYESEDDDDSDGPGYPSR 63

Query: 2045 KHS--KMPLKKRFET---------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEF 1899
            K S  ++PLKKRFET         G                                 E 
Sbjct: 64   KPSGSQVPLKKRFETADKDDMRGKGDRDGGSDDSDSGLSVGSDLYKDENDREELSRMTEL 123

Query: 1898 EREMLLAERAEKRDSKQLIKSAAERHPPSDSKKSXXXXXXXXQYREMRSSVRGADKGKAR 1719
            EREM+L +RA++RD+   +K A  +    D  +S             RSS +        
Sbjct: 124  EREMILTDRADRRDNLMRMKKAERQ---GDKSRSTGKELMAPPQARGRSSAKSDRMANKD 180

Query: 1718 ALTELIAKKRKAQDTDSQRRR----NDKASKDSSPXXXXXXXXXXXXXXXXXXSHEGSPR 1551
            ALTEL+AK ++     S+R+      +KA+  +SP                    E S  
Sbjct: 181  ALTELLAKMQRKSRNRSERQDLMVVRNKAAAAASPVSDSPPSSGVRSSSDG---REVSVE 237

Query: 1550 GNKRGKXXXXXXDSGAASYADICKITIKRSKLAKWFMEPFFESIIEGCFVRLGIG-EKHG 1374
              +  +       S   ++ DI  ITI+RS+LAKWF+EPFFE  I GCFVR+GIG  + G
Sbjct: 238  LGESDEDEGPTSGSEHPTFEDIKGITIRRSRLAKWFLEPFFEEAIVGCFVRVGIGTSRSG 297

Query: 1373 RRYYRLCRVKNVDASSTDPKKKYTFEKRATFKYLNCFWGDESNAARWQMIRVSDSSPDEL 1194
            +  YRLC V+NVDAS  DP ++Y FE R T KYLNC WG E++AARWQM R+SDS+P E 
Sbjct: 298  QSIYRLCMVRNVDAS--DPDRQYKFENRTTHKYLNCVWGSEASAARWQMARISDSAPLEK 355

Query: 1193 EYIDLREEMERKGGKMIRTDEVEEKLTQLEQINN-YVYSAETVKQMLQEKKMASQRPSNI 1017
            E+++   E+ER GG+M    +V +K   ++++++ +VYSA TVKQMLQEKK AS RPSNI
Sbjct: 356  EFLEWVREVERGGGRMPTKQDVIDKGEAIQRLSSSFVYSAATVKQMLQEKKSASTRPSNI 415

Query: 1016 AAEKEKLRKELMHAESMEDQEEAERIRMKLRELEVISNQSKNKNEKALMLAEMNRKNRAE 837
            AAEK++LRKE+  AES  D  EAER+R +L+ELE +S QSK K+ KA+MLAEMNR+NRAE
Sbjct: 416  AAEKDRLRKEMELAESRLDHAEAERVRARLQELENLSQQSKKKDAKAVMLAEMNRRNRAE 475

Query: 836  NFRVASESKRANANLKAGEAGYDPFSRRWTRSHNYYASKVSNANEAVPEAEKQPEETKVE 657
            NF+ ASE K  N +LKAGEAGYDPFSRRWTRS NYY SK     E V       EE +  
Sbjct: 476  NFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPEGGGEVV------KEEAETA 529

Query: 656  ETEKDMKVAVEEGKLINTEAPPCIGSKVHALHNFELDLSPDLLNRYGGAQGAPAAFMARR 477
             T+  ++ A + GKL++T+AP   G++ H+LH+FEL +S   L R+GG QGA  AFMAR+
Sbjct: 530  ATKAALEAAADAGKLVDTKAPVDEGTESHSLHDFELPISLAGLQRFGGPQGAQLAFMARK 589

Query: 476  QQLEARYGIPIPSNDGKRHSLTLTVDDYKRRRGLM 372
            Q++EA  G+ +P NDG+RHSLTL+V DYKRRRGL+
Sbjct: 590  QRIEATIGVRVPENDGRRHSLTLSVSDYKRRRGLV 624


>ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citrus clementina]
            gi|557524836|gb|ESR36142.1| hypothetical protein
            CICLE_v10028000mg [Citrus clementina]
          Length = 643

 Score =  449 bits (1155), Expect = e-123
 Identities = 282/653 (43%), Positives = 360/653 (55%), Gaps = 34/653 (5%)
 Frame = -2

Query: 2228 MADLENLFLECAGRSMSLDGHQDNSKTRKRRPSFSDSENGSDSNKYSEPDDSDQDDEMPN 2049
            MADLENL LE AGR+ S   ++ ++ + KRR        GS S   S  DDSD +    +
Sbjct: 1    MADLENLLLEAAGRTNSAGRNRHSASSSKRR------REGSYSGSDSRDDDSDDNRGYGS 54

Query: 2048 LKHS--KMPLKKRFETGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-----FERE 1890
             K S  ++PLKKR +                                          ERE
Sbjct: 55   RKPSGSQVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDSSNESDDDNHGQMTELERE 114

Query: 1889 MLLAERAEKRDSKQLIKSAAERHPPSDSKKSXXXXXXXXQYREMRSSVRGADKGKAR--A 1716
            M++ ER +K+  K L      R     S +S          R  R + R AD+  A+  A
Sbjct: 115  MMIFERDDKKVDKNLRDKFRSRREER-STRSTKETPPLPSSRSARLAARSADRAAAKDDA 173

Query: 1715 LTELIAKKRKAQDTDSQRRRNDKASKDS-------------SPXXXXXXXXXXXXXXXXX 1575
            L EL AK+ K QD ++ RR  D +   S             +P                 
Sbjct: 174  LNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESRSHS 233

Query: 1574 XSHEGSPRGNKRGKXXXXXXDSGAASYADICKITIKRSKLAKWFMEPFFESIIEGCFVRL 1395
                 +  G            SG  +Y DI +ITI+RSKLAKWFMEPFFE +I GCFVR+
Sbjct: 234  DDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRV 293

Query: 1394 GIGEKHGRRYYRLCRVKNVDASSTDPKKKYTFEKRATFKYLNCFWGDESNAARWQMIRVS 1215
            GIG       YRLC V+NVDA  T+P + Y  E R T KYLN  WG+ES+AARWQM  VS
Sbjct: 294  GIGRSKNGPIYRLCMVRNVDA--TEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVS 351

Query: 1214 DSSPDELEYIDLREEMERKGGKMIRTDEVEEKLTQLEQINNYVYSAETVKQMLQEKKMAS 1035
            DS P E E+     E+ER GG+M    +V EK   +++IN +VYSA TVKQMLQEKK AS
Sbjct: 352  DSPPLEEEFKQWLREVERNGGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSAS 411

Query: 1034 QRPSNIAAEKEKLRKELMHAESMEDQEEAERIRMKLRELEVISNQSKNKNEKALMLAEMN 855
             RP N+AAEK++LR+EL  A+S  D  + ERI+ +L+ELE  S  SK K+ KA+ LAEMN
Sbjct: 412  SRPLNVAAEKDRLRRELEVAQSRHDDVDMERIKKRLQELEA-SRDSKVKDAKAIRLAEMN 470

Query: 854  RKNRAENFRVASESKRANANLKAGEAGYDPFSRRWTRSHNYYASK-----VSNAN---EA 699
            RKNR ENF+ ASE KR N +LKAGEAGYDPFSRRWTRS NYY SK      + AN     
Sbjct: 471  RKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNG 530

Query: 698  VPEAEKQPE----ETKVEETEKDMKVAVEEGKLINTEAPPCIGSKVHALHNFELDLSPDL 531
            VP      E    E  +  TE  ++ A   GKL++T AP  +G++ + LH+FELD+S + 
Sbjct: 531  VPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNA 590

Query: 530  LNRYGGAQGAPAAFMARRQQLEARYGIPIPSNDGKRHSLTLTVDDYKRRRGLM 372
            L ++GG QG  A FMAR+Q++EA  G  +P NDG+RH+LTLTV DYKRRRGL+
Sbjct: 591  LKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643


>ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Citrus sinensis] gi|568867309|ref|XP_006486981.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform X2 [Citrus sinensis]
          Length = 643

 Score =  447 bits (1150), Expect = e-122
 Identities = 282/653 (43%), Positives = 361/653 (55%), Gaps = 34/653 (5%)
 Frame = -2

Query: 2228 MADLENLFLECAGRSMSLDGHQDNSKTRKRRPSFSDSENGSDSNKYSEPDDSDQDDEMPN 2049
            MADLENL LE AGR+ S   ++ ++ + KRR        GS S   S  DDSD +    +
Sbjct: 1    MADLENLLLEAAGRTNSAGRNRHSASSSKRR------REGSYSGSDSRDDDSDDNRGYGS 54

Query: 2048 LKHS--KMPLKKRFET-----GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFERE 1890
             K S  ++PLKKR +                                        E ERE
Sbjct: 55   RKPSGSQVPLKKRLDPTERDDDQGSQEEGDYDGGASEHEGDSSNESDDDNHGQMTELERE 114

Query: 1889 MLLAERAEKRDSKQLIKSAAERHPPSDSKKSXXXXXXXXQYREMRSSVRGADKGKAR--A 1716
            M++ ER +K+  K L      R     S +S          R  R + R AD+  A+  A
Sbjct: 115  MMIFERDDKKVDKNLRDKFRSRREER-STRSTKETPPLPSSRSARLAARSADRAAAKDDA 173

Query: 1715 LTELIAKKRKAQDTDSQRRRNDKASKDS-------------SPXXXXXXXXXXXXXXXXX 1575
            L EL AK+ K QD ++ RR  D +   S             +P                 
Sbjct: 174  LNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESRSHS 233

Query: 1574 XSHEGSPRGNKRGKXXXXXXDSGAASYADICKITIKRSKLAKWFMEPFFESIIEGCFVRL 1395
                 +  G            SG  +Y DI +ITI+RSKLAKWFMEPFFE +I GCFVR+
Sbjct: 234  DDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRV 293

Query: 1394 GIGEKHGRRYYRLCRVKNVDASSTDPKKKYTFEKRATFKYLNCFWGDESNAARWQMIRVS 1215
            GIG       YRLC V+NVDA  T+P + Y  E R T KYLN  WG+ES+AARWQM  VS
Sbjct: 294  GIGRSKNGPIYRLCMVRNVDA--TEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVS 351

Query: 1214 DSSPDELEYIDLREEMERKGGKMIRTDEVEEKLTQLEQINNYVYSAETVKQMLQEKKMAS 1035
            DS P E E+     E+ER  G+M    +V EK   +++IN +VYSA TVKQMLQEKK AS
Sbjct: 352  DSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKDSIQKINTFVYSAATVKQMLQEKKSAS 411

Query: 1034 QRPSNIAAEKEKLRKELMHAESMEDQEEAERIRMKLRELEVISNQSKNKNEKALMLAEMN 855
             RP N+AAEK++LR+EL  A+S  D+ + ERI+ +L+ELE  S  SK K+ KA+ LAEMN
Sbjct: 412  SRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEA-SRDSKVKDAKAIRLAEMN 470

Query: 854  RKNRAENFRVASESKRANANLKAGEAGYDPFSRRWTRSHNYYASK-----VSNAN---EA 699
            RKNR ENF+ ASE KR N +LKAGEAGYDPFSRRWTRS NYY SK      + AN     
Sbjct: 471  RKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNG 530

Query: 698  VPEAEKQPE----ETKVEETEKDMKVAVEEGKLINTEAPPCIGSKVHALHNFELDLSPDL 531
            VP      E    E  +  TE  ++ A   GKL++T AP  +G++ + LH+FELD+S + 
Sbjct: 531  VPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNA 590

Query: 530  LNRYGGAQGAPAAFMARRQQLEARYGIPIPSNDGKRHSLTLTVDDYKRRRGLM 372
            L ++GG QG  A FMAR+Q++EA  G  +P NDG+RH+LTLTV DYKRRRGL+
Sbjct: 591  LKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643


>ref|XP_006392066.1| hypothetical protein EUTSA_v10023338mg [Eutrema salsugineum]
            gi|557088572|gb|ESQ29352.1| hypothetical protein
            EUTSA_v10023338mg [Eutrema salsugineum]
          Length = 644

 Score =  447 bits (1150), Expect = e-122
 Identities = 283/652 (43%), Positives = 354/652 (54%), Gaps = 33/652 (5%)
 Frame = -2

Query: 2228 MADLENLFLECAGRSMSLDGHQDNSKTRKRRPSFSDSENGSDSNKYSEPDDSDQDDEMPN 2049
            M DL++L LE AGR+ +    + +     RR   S S+ GSDS      DDSD++    +
Sbjct: 1    MVDLDDLLLEAAGRTNAPGRSRHSHPPSSRRREGSYSDGGSDSR-----DDSDEERGYAS 55

Query: 2048 LKHS--KMPLKKRFET--------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1917
             K S  ++PLKKR E                                             
Sbjct: 56   RKPSGSQVPLKKRLEAEREDRAARDEAGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKL 115

Query: 1916 XXXXEFEREMLLAERAEKRDSKQLIKSAAERHPPSDSKKSXXXXXXXXQYREMRSSVRGA 1737
                EF+REM+LAERA+K+  K   +    +     +  S          R +RSS R A
Sbjct: 116  AGMTEFQREMILAERADKKGDKNFTEKLRSKREKEKTPVSKKETQPLPASRGVRSSARSA 175

Query: 1736 DKGKAR--ALTELIAKKRKAQDTDSQRRRNDKA-----SKDSSPXXXXXXXXXXXXXXXX 1578
            D+  A+  AL EL AK+ K Q+  S R+  D +     S+D S                 
Sbjct: 176  DRAAAKDDALNELRAKRMKQQEPASLRKLRDASKGGSGSRDFSSMKRKPLASSNLSNSSQ 235

Query: 1577 XXSHEGSP---RGNKRGKXXXXXXDSGAASYADICKITIKRSKLAKWFMEPFFESIIEGC 1407
              S   S     G+  G        S   ++ DI  ITI+RSKLAKW MEPFFE +I GC
Sbjct: 236  SDSDSRSQSDDEGSNGGMVDSDDDRSDVPTFEDIKDITIRRSKLAKWLMEPFFEELIVGC 295

Query: 1406 FVRLGIGEKHGRRYYRLCRVKNVDASSTDPKKKYTFEKRATFKYLNCFWGDESNAARWQM 1227
            FVR+GIG       YRLC VKNVDA  TDP K Y  E + T KYLNC WG ES+AARWQM
Sbjct: 296  FVRVGIGRSKNGPIYRLCMVKNVDA--TDPDKTYKLENKTTHKYLNCIWGHESSAARWQM 353

Query: 1226 IRVSDSSPDELEYIDLREEMERKGGKMIRTDEVEEKLTQLEQINNYVYSAETVKQMLQEK 1047
              +SD  P E EY     E+ER  G+M    ++ EK   +++IN++VYSAETVKQMLQEK
Sbjct: 354  AMISDGYPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIKRINSFVYSAETVKQMLQEK 413

Query: 1046 KMASQRPSNIAAEKEKLRKELMHAESMEDQEEAERIRMKLRELEVISNQSKNKNEKALML 867
            K AS RP NIAAEK++LRKEL  A+   D+   ERI+ K+++LE  S + K  ++KAL L
Sbjct: 414  KSASVRPMNIAAEKDRLRKELEVAQIKNDEAGVERIKAKIKQLEA-SREKKEVDKKALKL 472

Query: 866  AEMNRKNRAENFRVASESKRANANLKAGEAGYDPFSRRWTRSHNYYASKVSNANEAVPEA 687
            AEMN+KNRAENF+ ASE K   A+LKAGEAGYDPFSRRWTRS NYY  K     +    A
Sbjct: 473  AEMNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKRKEGGDTEATA 532

Query: 686  EKQPE-------ETKVEETEKDMKVAVEEGKLINTEAPPCIGSKVHALHNFELDLSPDLL 528
                E       E  VE TE  ++ A + GKLI+T AP   G++ + LHNFEL LS   L
Sbjct: 533  AAAVETNGAAAGENGVEATEAALEAAADAGKLIDTRAPIGQGAEHNLLHNFELPLSLTAL 592

Query: 527  NRYGGAQGAPAAFMARRQQLEARYGIPIPSNDGKRHSLTLTVDDYKRRRGLM 372
             +YGG QG   AFMAR+Q  EA  G  +  NDGKRH LTLTV DYKRRRGL+
Sbjct: 593  QKYGGPQGVQKAFMARKQVTEATVGCRVAENDGKRHGLTLTVSDYKRRRGLL 644


>ref|XP_002888111.1| At1g61040/T7P1_17 [Arabidopsis lyrata subsp. lyrata]
            gi|297333952|gb|EFH64370.1| At1g61040/T7P1_17
            [Arabidopsis lyrata subsp. lyrata]
          Length = 643

 Score =  447 bits (1150), Expect = e-122
 Identities = 284/653 (43%), Positives = 356/653 (54%), Gaps = 34/653 (5%)
 Frame = -2

Query: 2228 MADLENLFLECAGRSMSLDGHQDNSKTRKRRPSFSDSENGSDSNKYSEPDDSDQDDEMPN 2049
            M DLENL LE AGR+ S    +    +R+R  S+SD    SDS      DDSD+D    +
Sbjct: 1    MGDLENLLLEAAGRTNSAGRSRHPPSSRRREGSYSDGS--SDSR-----DDSDEDRGYAS 53

Query: 2048 LKHS--KMPLKKRFET--------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1917
             K S  ++PLKKR E                                             
Sbjct: 54   RKPSGSQVPLKKRLEAEREDRAARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKL 113

Query: 1916 XXXXEFEREMLLAERAEKRDSKQLIKSAAERHPPSDSKKSXXXXXXXXQYREMRSSVRGA 1737
                EF+REM+LAERA+K+  K   +    +     +  S          R +RSS R A
Sbjct: 114  AGMTEFQREMILAERADKKGDKNFTEKLRSKRENEKTPVSKKETQPLPASRGVRSSARSA 173

Query: 1736 DKGKAR--ALTELIAKKRKAQDTDSQRRRNDKA-----SKDSSPXXXXXXXXXXXXXXXX 1578
            D+  A+  AL EL AK+ K QD  + R+  D +     S+D S                 
Sbjct: 174  DRAAAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSMKRKPLASSNLSSSSQ 233

Query: 1577 XXSHEGSP---RGNKRGKXXXXXXDSGAASYADICKITIKRSKLAKWFMEPFFESIIEGC 1407
              S   S     G+  G        S   ++ D+ +ITI+RSKLAKW MEPFFE +I GC
Sbjct: 234  SDSDSRSQSDDEGSNAGMLDSDDDRSDVPTFEDVKEITIRRSKLAKWLMEPFFEELIVGC 293

Query: 1406 FVRLGIGEKHGRRYYRLCRVKNVDASSTDPKKKYTFEKRATFKYLNCFWGDESNAARWQM 1227
            FVR+GIG       YRLC VKNVDA  TDP K Y  E + T KYLN  WG+E++AARWQM
Sbjct: 294  FVRVGIGRSKSGPIYRLCWVKNVDA--TDPDKTYKLENKTTHKYLNVVWGNETSAARWQM 351

Query: 1226 IRVSDSSPDELEYIDLREEMERKGGKMIRTDEVEEKLTQLEQINNYVYSAETVKQMLQEK 1047
              +SD  P E EY     E+ER  G+M    ++ EK   +++IN++VYSAETVKQMLQEK
Sbjct: 352  AMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRINSFVYSAETVKQMLQEK 411

Query: 1046 KMASQRPSNIAAEKEKLRKELMHAESMEDQEEAERIRMKLRELEVISNQSKNKNEKALML 867
            K AS RP N+AAEK++LRKEL  A+S  D+   ERI+ K+++L+  S   K  ++KAL L
Sbjct: 412  KSASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKTKIKQLDA-SRNKKGVDKKALKL 470

Query: 866  AEMNRKNRAENFRVASESKRANANLKAGEAGYDPFSRRWTRSHNYYASK--------VSN 711
            AEMN+KNRAENF+ ASE K  +A+LKAGEAGYDPFSRRWTRS NYY  K           
Sbjct: 471  AEMNKKNRAENFKNASEVKSISASLKAGEAGYDPFSRRWTRSSNYYNGKNKGKDGEENET 530

Query: 710  ANEAVPEAEKQPEETKVEETEKDMKVAVEEGKLINTEAPPCIGSKVHALHNFELDLSPDL 531
            A  A  E         VE TE  ++ A E GKLI+T AP   G++ + LHNFEL LS   
Sbjct: 531  AVAAAVETNGADVGAGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQLHNFELSLSLTA 590

Query: 530  LNRYGGAQGAPAAFMARRQQLEARYGIPIPSNDGKRHSLTLTVDDYKRRRGLM 372
            L +YGG QG   AFMAR+Q  EA  G  +  NDGKRH LTLTV DYKRRRGL+
Sbjct: 591  LQKYGGPQGVQKAFMARKQVTEATVGCRVAENDGKRHGLTLTVSDYKRRRGLL 643


>ref|XP_002305685.1| plus-3 domain-containing family protein [Populus trichocarpa]
            gi|222848649|gb|EEE86196.1| plus-3 domain-containing
            family protein [Populus trichocarpa]
          Length = 662

 Score =  447 bits (1150), Expect = e-122
 Identities = 284/671 (42%), Positives = 367/671 (54%), Gaps = 52/671 (7%)
 Frame = -2

Query: 2228 MADLENLFLECAGRSMSLDGHQDN---SKTRKRRPSFSDSENGSDSNKYSEPDDSDQDDE 2058
            MADLENL LE AGR+     ++++   S+ RKR  S+SD   GSDS      DDSD D  
Sbjct: 1    MADLENLLLEAAGRTGKSGRNRNSILPSRRRKREGSYSDG--GSDSRD----DDSDDDRG 54

Query: 2057 MPNLKHS--KMPLKKRFET----------------GXXXXXXXXXXXXXXXXXXXXXXXX 1932
              N K S  ++PLKKR ET                G                        
Sbjct: 55   YANRKPSGSQVPLKKRLETNERDGEEGSQDEGDYDGGGSDREGGSSDESDIGDDLYKDED 114

Query: 1931 XXXXXXXXXEFEREMLLAERAEKRDSKQLIKSAAERHPPSDSKKSXXXXXXXXQYREMRS 1752
                     E +RE++LA+RA+K+  K L +    +       +S          R +RS
Sbjct: 115  DRKKLAQMSELDRELILADRADKKGDKHLTEKIRLKRDNDKPTRSRKETPPLPSSRGVRS 174

Query: 1751 SVRGADKGKAR--ALTELIAKKRKAQDTDSQRRRND--KASKDSSPXXXXXXXXXXXXXX 1584
            S R AD+  A+  AL EL AK+ K QD ++ R+  D  + S  S                
Sbjct: 175  SARSADRAAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGSAGSRGFSQVKKNNFTSASL 234

Query: 1583 XXXXSHEGSPR----------GNKRGKXXXXXXDSGAASYADICKITIKRSKLAKWFMEP 1434
                S  GS            G            S   +Y DI +ITI+R+KLAKWFMEP
Sbjct: 235  SSSSSESGSRSHSEDEGSTGDGGMADSDEDVEPGSKGPTYEDIKEITIRRTKLAKWFMEP 294

Query: 1433 FFESIIEGCFVRLGIGEKHGRRYYRLCRVKNVDASSTDPKKKYTFEKRATFKYLNCFWGD 1254
            +FE +I GCFVR+GIG       YRLC V+NVDA+  +P K Y  E ++T+KYLN  WG 
Sbjct: 295  WFEELIIGCFVRVGIGRSKSGPVYRLCMVRNVDAA--EPDKPYKLENKSTYKYLNVTWGA 352

Query: 1253 ESNAARWQMIRVSDSSPDELEYIDLREEMERKGGKMIRTDEVEEKLTQLEQINNYVYSAE 1074
            +++AARWQM  VSDS P E EY     E+E  GG++    ++ EK   + + N +VYSA 
Sbjct: 353  DTSAARWQMAMVSDSGPTEEEYKQWVREVECGGGRLPSKQDILEKKEAIRKSNTFVYSAA 412

Query: 1073 TVKQMLQEKKMASQRPSNIAAEKEKLRKELMHAESMEDQEEAERIRMKLRELEVISNQSK 894
            TVKQMLQEKK AS RP N+AAEK++LR+EL  A+S  D+ E ERI  ++ ELE  S  +K
Sbjct: 413  TVKQMLQEKKSASSRPLNVAAEKDRLRRELEIAQSKHDEAEVERINARIEELEA-SRHAK 471

Query: 893  NKNEKALMLAEMNRKNRAENFRVASESKRANANLKAGEAGYDPFSRRWTRSHNYY----- 729
             K+ KA+ LAEMNRKNR ENFR ASE K  N  LKAGEAGYDPFSRRWTRS NYY     
Sbjct: 472  VKDAKAIRLAEMNRKNRVENFRNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYVSKPA 531

Query: 728  ------ASKVSNANEAVPEAEKQP------EETKVEETEKDMKVAVEEGKLINTEAPPCI 585
                  A+K+S ANE V  A           E  V  TE  ++ A + GKL++T AP   
Sbjct: 532  EADDPVATKISEANETVAVAASNQVVAGVMSEAGVAATEAALEAAADAGKLVDTSAPVDQ 591

Query: 584  GSKVHALHNFELDLSPDLLNRYGGAQGAPAAFMARRQQLEARYGIPIPSNDGKRHSLTLT 405
            G++ + +H+FEL++S   L  +GG QGA A FMAR+Q++EA  G  +P NDG+RH+LTLT
Sbjct: 592  GTESNTMHSFELEISLIALQEFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLT 651

Query: 404  VDDYKRRRGLM 372
            V DYKRRRGL+
Sbjct: 652  VGDYKRRRGLL 662


>ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
            gi|223541691|gb|EEF43239.1| RNA polymerase-associated
            protein RTF1, putative [Ricinus communis]
          Length = 660

 Score =  445 bits (1145), Expect = e-122
 Identities = 278/665 (41%), Positives = 364/665 (54%), Gaps = 46/665 (6%)
 Frame = -2

Query: 2228 MADLENLFLECAGRSMSLDGHQDNSKTRKRRPSFSDSENGSDSNKYSEPDDSDQDDEMPN 2049
            MADLENL LE AGR+ +   +++     +RR   S S+ GSDS      DD       P+
Sbjct: 1    MADLENLLLEAAGRTGTSGRNRNALPPSRRRREGSYSDGGSDSRDDDSDDDRGYSSRKPS 60

Query: 2048 LKHSKMPLKKRFET----------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1917
               S++PLKKR +                                               
Sbjct: 61   --GSQVPLKKRLDPTERDDDQGSQDEGDYDDGNSDREGDSSDGSDVGEDLYKNEDDRRKL 118

Query: 1916 XXXXEFEREMLLAERAEKRDSKQLIKSAAERHPPSDSKKSXXXXXXXXQYREMRSSVRGA 1737
                E EREM+L+ERA+K+  K L +    +     + +S          R +R+S R A
Sbjct: 119  AQMSELEREMILSERADKKGDKNLTERIRSKRESERTTRSRKETPPLPSSRGVRTSARSA 178

Query: 1736 DKGKAR--ALTELIAKKRKAQDTDSQRRRNDKASKDS-----SPXXXXXXXXXXXXXXXX 1578
            D+  A+  AL EL A++ K QD ++ R+  D + + S     SP                
Sbjct: 179  DRAAAKDDALNELKARRLKQQDPEAHRKLRDASRRGSGSRGFSPIKRKRFTSASLSSSSS 238

Query: 1577 XXSH------EGSPR-GNKRGKXXXXXXDSGAASYADICKITIKRSKLAKWFMEPFFESI 1419
                      EGS   G            S   ++ DI +ITI+RSKLAKWFMEP+FE +
Sbjct: 239  ESESRSHSEDEGSTGDGGMADSDDDGEPGSQGPTFDDIREITIRRSKLAKWFMEPWFEEL 298

Query: 1418 IEGCFVRLGIGEKHGRRYYRLCRVKNVDASSTDPKKKYTFEKRATFKYLNCFWGDESNAA 1239
            I GCFVR+GIG       YRLC V+NVDA+  DP + Y  E + T+KYLN  WG+ES+AA
Sbjct: 299  IVGCFVRVGIGRSKSGPIYRLCLVRNVDAA--DPDRPYKLENKTTYKYLNVIWGNESSAA 356

Query: 1238 RWQMIRVSDSSPDELEYIDLREEMERKGGKMIRTDEVEEKLTQLEQINNYVYSAETVKQM 1059
            RWQM  +SDS+P E EY     E+ER GG+M    ++ EK   + + N +VYSA TVKQM
Sbjct: 357  RWQMAMISDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIRKSNTFVYSAATVKQM 416

Query: 1058 LQEKKMASQRPSNIAAEKEKLRKELMHAESMEDQEEAERIRMKLRELEVISNQSKNKNEK 879
            LQEKK AS RP N+AAEK++LR+EL  A+S +D  E ERIR +++ELE  S Q++ K+ K
Sbjct: 417  LQEKKSASSRPLNVAAEKDRLRRELEVAQSKQDDAEVERIRARIQELEA-SRQTQGKDAK 475

Query: 878  ALMLAEMNRKNRAENFRVASESKRANANLKAGEAGYDPFSRRWTRSHNYYASKVSNANEA 699
            A+ LAEMNRKNRAENFR ASE K  N +LKAGEAGYDPFSRRWTRS NYY SK +  + A
Sbjct: 476  AIRLAEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPAGGDAA 535

Query: 698  ----------VPEAEKQPE------ETKVEETEKDMKVAVEEGKLINTEAPPCIGSKVHA 567
                      V  A K         E  +  T   ++ A + GKL++T AP   G++ + 
Sbjct: 536  AATNNEASGTVAVANKTESAAGVSAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNT 595

Query: 566  LHNFELDLSPDLLNRYGGAQGAPAAFMARRQQLEARYGIPIPSNDGKRHSLTLTVDDYKR 387
            LHNFEL +S   L ++GGAQGA A FMAR+Q++EA  G  +  ND KRH LTLTV DYKR
Sbjct: 596  LHNFELPISLTALQKFGGAQGAQAGFMARKQRIEATIGCRVSENDEKRHVLTLTVSDYKR 655

Query: 386  RRGLM 372
            RRGL+
Sbjct: 656  RRGLL 660


>gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao]
            gi|508781058|gb|EOY28314.1| PAF1 complex component
            isoform 1 [Theobroma cacao]
          Length = 660

 Score =  444 bits (1143), Expect = e-122
 Identities = 278/670 (41%), Positives = 367/670 (54%), Gaps = 51/670 (7%)
 Frame = -2

Query: 2228 MADLENLFLECAGRSMSLDGHQDNSKTRKRRPSFSDSENGSDSNKYSEPDDSDQDDEMPN 2049
            MADLENL LE AGR+ +   ++ +    +RR   S S+ GSDS      DDSD D    +
Sbjct: 1    MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRD----DDSDDDHGYAS 56

Query: 2048 LKHS--KMPLKKRFETGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEF-------- 1899
             K S  ++PLKKR +                                   +         
Sbjct: 57   RKPSGSQVPLKKRLDPAERDDDQGSQEEGDYDDGVSVHEGDSSDESDVGDDLYKNEDDRR 116

Query: 1898 --------EREMLLAERAEKRDSKQL---IKSAAERHPPSDSKKSXXXXXXXXQYREMRS 1752
                    ERE++L+ERA+KR  K+    I+S  E   PS S+K           R +RS
Sbjct: 117  KLAQMTELERELILSERADKRGDKKFTEKIRSKRENDRPSRSRKETPPLPSS---RGVRS 173

Query: 1751 SVRGADKGKAR--ALTELIAKKRKAQDTDSQRRRNDKASKDSSPXXXXXXXXXXXXXXXX 1578
            S R AD+  A+  AL EL AK+ K QD ++ R+  D +   S                  
Sbjct: 174  SARSADRAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGSRGLSPVKRKPFTASSL 233

Query: 1577 XXSHEGSPRGNKRGKXXXXXXDSGAA--------------SYADICKITIKRSKLAKWFM 1440
              S +         +      D G                ++ DI +ITI+RSKLAKWFM
Sbjct: 234  SSSSQSDSESRSNSEDEGSTGDGGMVDSDDDRGMQGPDGPTFDDIKEITIRRSKLAKWFM 293

Query: 1439 EPFFESIIEGCFVRLGIGEKHGRRYYRLCRVKNVDASSTDPKKKYTFEKRATFKYLNCFW 1260
            EPFFE +I GC+VR+GIG       YRLC V+NVDA  T+P++ Y  E + T+KYLN  W
Sbjct: 294  EPFFEELIVGCYVRVGIGRSKSGPIYRLCMVRNVDA--TEPERTYKLENKTTYKYLNVVW 351

Query: 1259 GDESNAARWQMIRVSDSSPDELEYIDLREEMERKGGKMIRTDEVEEKLTQLEQINNYVYS 1080
            G+ES+AARWQM  +SDS P E E+  L  E+ER GG+M    +V EK   L++   +VYS
Sbjct: 352  GNESSAARWQMAMISDSPPQEEEFRQLIRELERSGGRMPSKQDVLEKKEALQKAKTFVYS 411

Query: 1079 AETVKQMLQEKKMASQRPSNIAAEKEKLRKELMHAESMEDQEEAERIRMKLRELEVISNQ 900
            A TVKQMLQEKK  S RP NIAAEK++LR++L  A+S  D+ E ERI+M+L++LE  S Q
Sbjct: 412  AATVKQMLQEKKSTSSRPLNIAAEKDRLRRDLEIAQSKHDEAEVERIKMRLQQLEA-SRQ 470

Query: 899  SKNKNEKALMLAEMNRKNRAENFRVASESKRANANLKAGEAGYDPFSRRWTRSHNYYASK 720
            ++ K+ KA+ LAEMNRKNRAENF+ ASE K  N  LKAGEAGYDPFSRRWTRS NYY +K
Sbjct: 471  AQEKDAKAVRLAEMNRKNRAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVAK 530

Query: 719  VSNANEAV--------------PEAEKQPEETKVEETEKDMKVAVEEGKLINTEAPPCIG 582
               A+ A                   +   E     T   ++ A   GKL++T AP   G
Sbjct: 531  PPGADAAAVANGDRIGVIASGNGNDARAAAEAGRAATVAALQEAAGAGKLVDTSAPVDEG 590

Query: 581  SKVHALHNFELDLSPDLLNRYGGAQGAPAAFMARRQQLEARYGIPIPSNDGKRHSLTLTV 402
            ++ + LH+FE+ +S + L R+GG QGA A FMAR+Q++EA  G  +P NDG+RH+LTLTV
Sbjct: 591  TESNMLHDFEIPISLNALQRFGGPQGAVAGFMARKQRIEATVGCQVPENDGRRHALTLTV 650

Query: 401  DDYKRRRGLM 372
             DYKRRRGL+
Sbjct: 651  SDYKRRRGLL 660


>ref|NP_176299.1| Paf1C-like transcription factor [Arabidopsis thaliana]
            gi|12323334|gb|AAG51642.1|AC018908_8 unknown protein;
            78902-80833 [Arabidopsis thaliana]
            gi|332195649|gb|AEE33770.1| Paf1C-like transcription
            factor [Arabidopsis thaliana]
          Length = 643

 Score =  444 bits (1143), Expect = e-122
 Identities = 282/653 (43%), Positives = 356/653 (54%), Gaps = 34/653 (5%)
 Frame = -2

Query: 2228 MADLENLFLECAGRSMSLDGHQDNSKTRKRRPSFSDSENGSDSNKYSEPDDSDQDDEMPN 2049
            M DLENL LE AGR+ S    +    +R+R  S+SD    SDS      DDSD+D    +
Sbjct: 1    MGDLENLLLEAAGRTNSAGRSRHPPSSRRREGSYSDGS--SDSR-----DDSDEDRGYAS 53

Query: 2048 LKHS--KMPLKKRFET--------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1917
             K S  ++PLKKR E                                             
Sbjct: 54   RKPSGSQVPLKKRLEAEREDRAARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKL 113

Query: 1916 XXXXEFEREMLLAERAEKRDSKQLIKSAAERHPPSDSKKSXXXXXXXXQYREMRSSVRGA 1737
                EF+REM+L+ERA+K+  K   +    +     +  S          R +RSS R A
Sbjct: 114  AGMTEFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSA 173

Query: 1736 DKGKAR--ALTELIAKKRKAQDTDSQRRRNDKA-----SKDSSPXXXXXXXXXXXXXXXX 1578
            D+  A+  AL EL AK+ K QD  + R+  D +     S+D S                 
Sbjct: 174  DRAAAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQ 233

Query: 1577 XXSHEGSP---RGNKRGKXXXXXXDSGAASYADICKITIKRSKLAKWFMEPFFESIIEGC 1407
              S   S     G+  G        S   ++ D+ ++TI+RSKLAKW MEPFFE +I GC
Sbjct: 234  SDSDSRSQSDDEGSNGGMLDSDDDRSDVPTFEDVKEVTIRRSKLAKWLMEPFFEELIVGC 293

Query: 1406 FVRLGIGEKHGRRYYRLCRVKNVDASSTDPKKKYTFEKRATFKYLNCFWGDESNAARWQM 1227
            FVR+GIG       YRLC VKNVDA  TDP K Y  E + T KYLN  WG+E++AARWQM
Sbjct: 294  FVRVGIGRSKSGPIYRLCWVKNVDA--TDPDKTYKLENKTTHKYLNVVWGNETSAARWQM 351

Query: 1226 IRVSDSSPDELEYIDLREEMERKGGKMIRTDEVEEKLTQLEQINNYVYSAETVKQMLQEK 1047
              +SD  P E EY     E+ER  G+M    ++ EK   +++ N++VYSAETVKQMLQEK
Sbjct: 352  AMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVKQMLQEK 411

Query: 1046 KMASQRPSNIAAEKEKLRKELMHAESMEDQEEAERIRMKLRELEVISNQSKNKNEKALML 867
            K AS RP N+AAEK++LRKEL  A+S  D+   ERI+ K+++L+  S   K  ++KAL L
Sbjct: 412  KSASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQLDA-SRNKKGVDKKALKL 470

Query: 866  AEMNRKNRAENFRVASESKRANANLKAGEAGYDPFSRRWTRSHNYY----ASKVSNANEA 699
            AEMN+KNRAENF+ ASE K   A+LKAGEAGYDPFSRRWTRS NYY      K    NEA
Sbjct: 471  AEMNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKNKGKDGEENEA 530

Query: 698  VPEAEKQPEETK----VEETEKDMKVAVEEGKLINTEAPPCIGSKVHALHNFELDLSPDL 531
               A  +         VE TE  ++ A E GKLI+T AP   G++ + LHNFEL LS   
Sbjct: 531  AVAAAVETNGADAGAGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQLHNFELSLSLTA 590

Query: 530  LNRYGGAQGAPAAFMARRQQLEARYGIPIPSNDGKRHSLTLTVDDYKRRRGLM 372
            L +YGG QG   AFMAR+Q  EA  G  +  NDGKRH LTLTV DYKRRRGL+
Sbjct: 591  LQKYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHGLTLTVSDYKRRRGLL 643


>gb|AAM10312.1| At1g61040/T7P1_17 [Arabidopsis thaliana]
          Length = 643

 Score =  444 bits (1142), Expect = e-122
 Identities = 282/653 (43%), Positives = 355/653 (54%), Gaps = 34/653 (5%)
 Frame = -2

Query: 2228 MADLENLFLECAGRSMSLDGHQDNSKTRKRRPSFSDSENGSDSNKYSEPDDSDQDDEMPN 2049
            M DLENL LE AGR+ S         +R+R  S+SD    SDS      DDSD+D    +
Sbjct: 1    MGDLENLLLEAAGRTNSAGRSSHPPSSRRREGSYSDGS--SDSR-----DDSDEDRGYAS 53

Query: 2048 LKHS--KMPLKKRFET--------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1917
             K S  ++PLKKR E                                             
Sbjct: 54   RKPSGSQVPLKKRLEAEREDRAARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKL 113

Query: 1916 XXXXEFEREMLLAERAEKRDSKQLIKSAAERHPPSDSKKSXXXXXXXXQYREMRSSVRGA 1737
                EF+REM+L+ERA+K+  K   +    +     +  S          R +RSS R A
Sbjct: 114  AGMTEFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSA 173

Query: 1736 DKGKAR--ALTELIAKKRKAQDTDSQRRRNDKA-----SKDSSPXXXXXXXXXXXXXXXX 1578
            D+  A+  AL EL AK+ K QD  + R+  D +     S+D S                 
Sbjct: 174  DRAAAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQ 233

Query: 1577 XXSHEGSP---RGNKRGKXXXXXXDSGAASYADICKITIKRSKLAKWFMEPFFESIIEGC 1407
              S   S     G+  G        S   ++ D+ ++TI+RSKLAKW MEPFFE +I GC
Sbjct: 234  SDSDSRSQSDDEGSNGGMLDSDDDRSDVPTFEDVKEVTIRRSKLAKWLMEPFFEELIVGC 293

Query: 1406 FVRLGIGEKHGRRYYRLCRVKNVDASSTDPKKKYTFEKRATFKYLNCFWGDESNAARWQM 1227
            FVR+GIG       YRLC VKNVDA  TDP K Y  E + T KYLN  WG+E++AARWQM
Sbjct: 294  FVRVGIGRSKSGPIYRLCWVKNVDA--TDPDKTYKLENKTTHKYLNVVWGNETSAARWQM 351

Query: 1226 IRVSDSSPDELEYIDLREEMERKGGKMIRTDEVEEKLTQLEQINNYVYSAETVKQMLQEK 1047
              +SD  P E EY     E+ER  G+M    ++ EK   +++ N++VYSAETVKQMLQEK
Sbjct: 352  AMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVKQMLQEK 411

Query: 1046 KMASQRPSNIAAEKEKLRKELMHAESMEDQEEAERIRMKLRELEVISNQSKNKNEKALML 867
            K AS RP N+AAEK++LRKEL  A+S  D+   ERI+ K+++L+  S   K  ++KAL L
Sbjct: 412  KSASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQLDA-SRNKKGVDKKALKL 470

Query: 866  AEMNRKNRAENFRVASESKRANANLKAGEAGYDPFSRRWTRSHNYY----ASKVSNANEA 699
            AEMN+KNRAENF+ ASE K   A+LKAGEAGYDPFSRRWTRS NYY      K    NEA
Sbjct: 471  AEMNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKNKGKDGEENEA 530

Query: 698  VPEAEKQPEETK----VEETEKDMKVAVEEGKLINTEAPPCIGSKVHALHNFELDLSPDL 531
               A  +         VE TE  ++ A E GKLI+T AP   G++ + LHNFEL LS   
Sbjct: 531  AVAAAVETNGADAGAGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQLHNFELSLSLTA 590

Query: 530  LNRYGGAQGAPAAFMARRQQLEARYGIPIPSNDGKRHSLTLTVDDYKRRRGLM 372
            L +YGG QG   AFMAR+Q  EA  G  +  NDGKRH LTLTV DYKRRRGL+
Sbjct: 591  LQKYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHGLTLTVSDYKRRRGLL 643


>ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Cicer arietinum] gi|502142571|ref|XP_004505023.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform X2 [Cicer arietinum]
          Length = 658

 Score =  440 bits (1132), Expect = e-120
 Identities = 284/667 (42%), Positives = 370/667 (55%), Gaps = 48/667 (7%)
 Frame = -2

Query: 2228 MADLENLFLECAGRSMSLDGHQDNS-KTRKRRPSFSDSENGSDSNKYSEPDDSDQDDEMP 2052
            MADLENL LE AGR+    G   +S    +RR   S S+ GSDS      DDSD +   P
Sbjct: 1    MADLENLLLEAAGRTGGAAGRNRHSIPPSRRRRDGSYSDGGSDSRD----DDSDDELNYP 56

Query: 2051 NLKHS--KMPLKKRFET----------------GXXXXXXXXXXXXXXXXXXXXXXXXXX 1926
            + K S  ++PLKKR +                                            
Sbjct: 57   SRKPSGSQVPLKKRLDPTERDDDLGSQEEADDDDGRSDREGDSSDESNIGDDLYKDEDDR 116

Query: 1925 XXXXXXXEFEREMLLAERAEKRDSKQLIKSAAERHPPSDSKKSXXXXXXXXQYREMRSSV 1746
                   E +REM+L++RA K+D K L+   A +     +  +          R MR+S 
Sbjct: 117  RKLSEMSELQREMILSDRASKKDDKSLLGKIASKREKGKAIMTGKQSPPLSSSR-MRASA 175

Query: 1745 RGADKG-KARALTELIAKKRKAQDTDSQRRRNDKASKDSSPXXXXXXXXXXXXXXXXXXS 1569
            R AD+  K  AL EL AK+ K QD +++RR  + AS++S P                  S
Sbjct: 176  RSADRSAKNVALNELRAKRLKQQDPEARRRLRE-ASRNSGPRRFSPPKRKSFTSANLSSS 234

Query: 1568 HEGSPRGNKRGKXXXXXXDSGAA--------------SYADICKITIKRSKLAKWFMEPF 1431
                              D G A              S+ DI +ITI+RSKLAKWFMEPF
Sbjct: 235  SHSDSDSRSHSDDEGSTGDGGIADSDDDRALSGSEGPSFQDIKEITIRRSKLAKWFMEPF 294

Query: 1430 FESIIEGCFVRLGIGEKHGRRYYRLCRVKNVDASSTDPKKKYTFEKRATFKYLNCFWGDE 1251
            FE +I GCFVR+GIG       YRLC VKNVD+S  DP ++Y  E R T KYLN  WG+E
Sbjct: 295  FEELIVGCFVRVGIGRSKTGPIYRLCMVKNVDSS--DPDRQYKLENRTTHKYLNVVWGNE 352

Query: 1250 SNAARWQMIRVSDSSPDELEYIDLREEMERKGGKMIRTDEVEEKLTQLEQINNYVYSAET 1071
            S+AARWQM  VSDS P E E+    +E+ER GG+M    +V EK   +++I  +VYSA+T
Sbjct: 353  SSAARWQMAMVSDSFPLEEEFKQWVKEVERSGGRMPTKQDVLEKKQAIQKIITFVYSADT 412

Query: 1070 VKQMLQEKKMASQRPSNIAAEKEKLRKELMHAESMEDQEEAERIRMKLRELEVISNQSKN 891
            VKQMLQEKK +S RP N+AAEK++LR+E+  A+S  D+ E ERI+ +++ELE  S  +K 
Sbjct: 413  VKQMLQEKKSSSSRPLNVAAEKDRLRREMEIAQSKNDEAEVERIKTRVQELEA-SRHAKV 471

Query: 890  KNEKALMLAEMNRKNRAENFRVASESKRANANLKAGEAGYDPFSRRWTRSHNYY------ 729
            K+ KAL LAEMNRKNR ENF+ ASE +  N  LKAGEAGYDPFSRRWTRS NYY      
Sbjct: 472  KDAKALKLAEMNRKNRFENFKNASELRPVNIGLKAGEAGYDPFSRRWTRSRNYYVAKPGE 531

Query: 728  --ASKVSNANEAVPEAEKQ------PEETKVEETEKDMKVAVEEGKLINTEAPPCIGSKV 573
              A++ +  N  V +A           E+ V  T   ++ A + GKL++T AP   G++ 
Sbjct: 532  KAAARKNTTNVLVADAGSNITGVPVTAESGVVATAAALEAAADAGKLVDTSAPVDQGTES 591

Query: 572  HALHNFELDLSPDLLNRYGGAQGAPAAFMARRQQLEARYGIPIPSNDGKRHSLTLTVDDY 393
            + LHNFEL +S  LL++YGGAQGA A FMAR+Q++EA  G  +  NDG+RH LTL+V DY
Sbjct: 592  NFLHNFELPISLALLHKYGGAQGAQAGFMARKQRMEATVGFRVSENDGRRHVLTLSVGDY 651

Query: 392  KRRRGLM 372
            KRRRGL+
Sbjct: 652  KRRRGLL 658


>ref|XP_002316628.2| plus-3 domain-containing family protein [Populus trichocarpa]
            gi|550327599|gb|EEE97240.2| plus-3 domain-containing
            family protein [Populus trichocarpa]
          Length = 664

 Score =  439 bits (1129), Expect = e-120
 Identities = 276/673 (41%), Positives = 364/673 (54%), Gaps = 54/673 (8%)
 Frame = -2

Query: 2228 MADLENLFLECAGRSMSLDGHQDNS--KTRKRRPSFSDSENGSDSNKYSEPDDSDQDDEM 2055
            MADLENL LE AGR+    G   NS   +R+R+   S S+ GSDS      DD       
Sbjct: 1    MADLENLLLEAAGRT-GKSGRNRNSLPPSRRRKQEGSYSDGGSDSRDDGSDDDRGYASRK 59

Query: 2054 PNLKHSKMPLKKRFETGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEF-------- 1899
            P+   S++PLKKR ET                                  +         
Sbjct: 60   PS--GSQVPLKKRLETNERDDEGGSQEEGDYDDGGSDREGESSDGSDIGDDLYKDEDDRQ 117

Query: 1898 --------EREMLLAERAEKRDSKQL---IKSAAERHPPSDSKKSXXXXXXXXQYREMRS 1752
                    +RE++LA+RA+K+  K L   I+S  +   P+ S+K           R +RS
Sbjct: 118  KLAQMSELDRELILADRADKKGDKHLTEKIRSKRDNDKPTRSRKETPPLPSS---RGVRS 174

Query: 1751 SVRGADKGKAR--ALTELIAKKRKAQDTDSQRRRNDKASKDSSPXXXXXXXXXXXXXXXX 1578
            S R AD+  A+  AL EL AK+ K QD ++ R+  D +   +                  
Sbjct: 175  SARSADRAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSAGSRGFAQVKKNNFTSARL 234

Query: 1577 XXSHEGSPRGNKRGKXXXXXXDSGAAS--------------YADICKITIKRSKLAKWFM 1440
              S   S  G++           G  +              Y DI +ITI+R+KLAKWFM
Sbjct: 235  SSSSSESESGSRSHSEDEGSTGDGGMADSDEDGDPGSRGPTYEDIKEITIRRTKLAKWFM 294

Query: 1439 EPFFESIIEGCFVRLGIGEKHGRRYYRLCRVKNVDASSTDPKKKYTFEKRATFKYLNCFW 1260
            EP+FE +I GCFVR+GIG       YRLC V+NVDA+  +P K Y  E ++T+KYLN  W
Sbjct: 295  EPWFEELIIGCFVRVGIGRSKTGPVYRLCMVRNVDAA--EPDKPYKLENKSTYKYLNVTW 352

Query: 1259 GDESNAARWQMIRVSDSSPDELEYIDLREEMERKGGKMIRTDEVEEKLTQLEQINNYVYS 1080
            G +S+AARWQM  VSDS+P E EY     E ER GG++    ++ EK   + + N +VYS
Sbjct: 353  GADSSAARWQMAMVSDSAPTEEEYKQWVREAERGGGRLPSKQDILEKKEAIRKSNTFVYS 412

Query: 1079 AETVKQMLQEKKMASQRPSNIAAEKEKLRKELMHAESMEDQEEAERIRMKLRELEVISNQ 900
            A TVKQMLQEKK AS RP N+AAEK++LR+EL  A+S  D+ E ERI  ++ ELE  S Q
Sbjct: 413  AATVKQMLQEKKSASSRPLNVAAEKDRLRRELEIAQSRHDEAEVERIEARILELEA-SRQ 471

Query: 899  SKNKNEKALMLAEMNRKNRAENFRVASESKRANANLKAGEAGYDPFSRRWTRSHNYYASK 720
            +K K+ KAL LAEMNRKNR ENFR ASE K  N  LKAGEAGYDPFSRRWTRS NYY S 
Sbjct: 472  AKVKDAKALRLAEMNRKNRVENFRNASELKPINTGLKAGEAGYDPFSRRWTRSRNYYVSN 531

Query: 719  VSNANEAVPEAEKQPEETK-----------------VEETEKDMKVAVEEGKLINTEAPP 591
             +  ++AV  +  +  +T                  V  T   +  A + GKL++T AP 
Sbjct: 532  PAGGDDAVAASNSEANDTAAVADSDHVVAGAMSESGVAATAAALDAAADAGKLVDTSAPV 591

Query: 590  CIGSKVHALHNFELDLSPDLLNRYGGAQGAPAAFMARRQQLEARYGIPIPSNDGKRHSLT 411
              G++ + +HNFEL++S   L ++ G QGA A FMAR+Q++EA  G  +  NDG+RH+LT
Sbjct: 592  DQGTESNTMHNFELEISLIALQKFRGPQGAHAGFMARKQRIEANVGCQVRENDGRRHALT 651

Query: 410  LTVDDYKRRRGLM 372
            LTV DYKRRRGL+
Sbjct: 652  LTVGDYKRRRGLL 664


>ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
            max]
          Length = 656

 Score =  437 bits (1124), Expect = e-119
 Identities = 278/667 (41%), Positives = 364/667 (54%), Gaps = 48/667 (7%)
 Frame = -2

Query: 2228 MADLENLFLECAGRSMSLDGHQDNSKTRKRRPSFSDSENGSDSNKYSEPDDSDQDDEMPN 2049
            MADLENL LE AGR+ +   ++ +    +RR   + S+ GSDS       D D DDE+  
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPPSRRRHDGAYSDGGSDSR------DDDSDDELNY 54

Query: 2048 LKH----SKMPLKKRFETGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEF------ 1899
                   S++PLKKR +                                    +      
Sbjct: 55   ASRKPSGSQVPLKKRLDPTERDDDLGSQEEADDDGRSDHDGDSSDESNIGDDLYKDEDDR 114

Query: 1898 ---------EREMLLAERAEKRDSKQLIKSAAERHPPSDSKKSXXXXXXXXQYREMRSSV 1746
                     +REM+L++RA K+D K L+   A +     +             R MR+S 
Sbjct: 115  RKLSEMTELQREMILSDRATKKDDKNLLGKIASKREKGKAAAPRKQSPPMSSSR-MRASA 173

Query: 1745 RGADKG-KARALTELIAKKRKAQDTDSQRRRNDKASKDSSPXXXXXXXXXXXXXXXXXXS 1569
            R AD+  K  AL EL AK+ K QD ++ RR  + AS+++ P                  S
Sbjct: 174  RSADRSAKNDALNELRAKRLKQQDPEAHRRLRE-ASRNAGPRHFSPPKRKTFTSTSLSSS 232

Query: 1568 HEGSPRGNKRGKXXXXXXDSGAA--------------SYADICKITIKRSKLAKWFMEPF 1431
                              D G A              S+ DI +ITI+RSKLAKWFMEPF
Sbjct: 233  SHSESESRSHSDDEGSTGDGGIADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPF 292

Query: 1430 FESIIEGCFVRLGIGEKHGRRYYRLCRVKNVDASSTDPKKKYTFEKRATFKYLNCFWGDE 1251
            FE +I GCFVR+GIG       YRLC VKNVDAS  +P ++Y  E + T+KYLN  WG+E
Sbjct: 293  FEELIVGCFVRVGIGRSKTGPIYRLCMVKNVDAS--EPDRQYKLENKTTYKYLNVVWGNE 350

Query: 1250 SNAARWQMIRVSDSSPDELEYIDLREEMERKGGKMIRTDEVEEKLTQLEQINNYVYSAET 1071
            S+AARWQM  VSDS+P E E+    +E++  GG+M    +V EK   +++   +VYSA T
Sbjct: 351  SSAARWQMAMVSDSAPMEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAAT 410

Query: 1070 VKQMLQEKKMASQRPSNIAAEKEKLRKELMHAESMEDQEEAERIRMKLRELEVISNQSKN 891
            VKQMLQEKK AS RP N+AAEK++LR+EL  A+S  D+ E ERI+ +L+ELE  S Q+K 
Sbjct: 411  VKQMLQEKKSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVERIKTRLQELEA-SRQAKQ 469

Query: 890  KNEKALMLAEMNRKNRAENFRVASESKRANANLKAGEAGYDPFSRRWTRSHNYYASK--- 720
            K+ KAL LAEMNRKNR ENF+ ASE K  N  LKAGEAGYDPFSRRWTRS NYYA+K   
Sbjct: 470  KDAKALKLAEMNRKNRFENFKNASELKPVNIGLKAGEAGYDPFSRRWTRSRNYYAAKPGE 529

Query: 719  -------VSNANEAVPEAEKQ----PEETKVEETEKDMKVAVEEGKLINTEAPPCIGSKV 573
                   + N N A   +         E  +  T   ++ A   GKL++T AP   G++ 
Sbjct: 530  KAAAGNNIVNGNVAGAGSNATGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTES 589

Query: 572  HALHNFELDLSPDLLNRYGGAQGAPAAFMARRQQLEARYGIPIPSNDGKRHSLTLTVDDY 393
            + LHNFEL +S  LL +YGGA GA A FMAR+Q++E+  G  +  NDG+RH+LTLTV DY
Sbjct: 590  NMLHNFELPISLALLQKYGGAPGAQAGFMARKQRIESTVGFRVSENDGRRHALTLTVSDY 649

Query: 392  KRRRGLM 372
            KRRRGL+
Sbjct: 650  KRRRGLL 656


>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Glycine max] gi|571466984|ref|XP_006583809.1| PREDICTED:
            RNA polymerase-associated protein RTF1 homolog isoform X2
            [Glycine max]
          Length = 656

 Score =  436 bits (1122), Expect = e-119
 Identities = 280/666 (42%), Positives = 364/666 (54%), Gaps = 47/666 (7%)
 Frame = -2

Query: 2228 MADLENLFLECAGRSMSLDGHQDNSKTRKRRPSFSDSENGSDSNKYSEPDDSDQDDEMPN 2049
            MADLENL LE AGR+ +   ++ +  + +RR   + S+ GSDS       D D DDE+  
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPSSRRRHDGAYSDGGSDSR------DEDSDDELNY 54

Query: 2048 LKH----SKMPLKKRFETGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEF------ 1899
                   S++PLKKR +                                    +      
Sbjct: 55   ASRKPSGSQVPLKKRLDPTERDDDLGSQEEADDDGRSDCDGDSSDESNIGDDLYKDEDDR 114

Query: 1898 ---------EREMLLAERAEKRDSKQLIKSAAERHPPSDSKKSXXXXXXXXQYREMRSSV 1746
                     +REM+L++RA K+D K L+   A +                   R MR+S 
Sbjct: 115  RKLSEMTELQREMILSDRATKKDDKNLLGKIASKREKGKVAVPRKQSPPMSSSR-MRASA 173

Query: 1745 RGADKG-KARALTELIAKKRKAQDTDSQRRRNDKASKDSSPXXXXXXXXXXXXXXXXXXS 1569
            R AD+  K  AL EL AK+ K QD ++ RR  + +    S                   S
Sbjct: 174  RSADRSAKNDALNELRAKRLKQQDPEAHRRLREASRNAGSRHFSPPKRKPFTSTSLSSSS 233

Query: 1568 H-----------EGSPR--GNKRGKXXXXXXDSGAASYADICKITIKRSKLAKWFMEPFF 1428
            H           EGS    G            S   S+ D+ +ITI+RSKLAKWFMEPFF
Sbjct: 234  HSESESRSHSDDEGSTGDGGIVDSDDDRALAGSEGPSFQDVKEITIRRSKLAKWFMEPFF 293

Query: 1427 ESIIEGCFVRLGIGEKHGRRYYRLCRVKNVDASSTDPKKKYTFEKRATFKYLNCFWGDES 1248
            E +I GCFVR+GIG       YRLC VKNVDAS  +P ++Y  E + T+KYLN  WG+ES
Sbjct: 294  EELIVGCFVRVGIGRSKTGPIYRLCMVKNVDAS--EPDRQYKLENKTTYKYLNVVWGNES 351

Query: 1247 NAARWQMIRVSDSSPDELEYIDLREEMERKGGKMIRTDEVEEKLTQLEQINNYVYSAETV 1068
            +AARWQM  VSDS+P E E+    +E++R GG+M    +V EK   +++   +VYSA TV
Sbjct: 352  SAARWQMAMVSDSAPLEEEFKQWVKEVDRSGGRMPSKQDVLEKKQAIQKAITFVYSAATV 411

Query: 1067 KQMLQEKKMASQRPSNIAAEKEKLRKELMHAESMEDQEEAERIRMKLRELEVISNQSKNK 888
            KQMLQEKK AS RP N+AAEK++LR+EL  A+S  D+ E ERI+ +L ELE  S Q+K K
Sbjct: 412  KQMLQEKKSASTRPLNVAAEKDRLRRELEIAQSKYDEAEVERIKTRLLELEA-SRQAKQK 470

Query: 887  NEKALMLAEMNRKNRAENFRVASESKRANANLKAGEAGYDPFSRRWTRSHNYYASKV--- 717
            + KAL LAEMNRKNR ENF+ ASE K  N  LKAGEAGYDPFSRRWTRS NYYA+K    
Sbjct: 471  DAKALKLAEMNRKNRFENFKNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYAAKPGEK 530

Query: 716  -----SNANEAVPEAEKQ------PEETKVEETEKDMKVAVEEGKLINTEAPPCIGSKVH 570
                 ++ N  V  A           E  +  T   ++ A   GKL++T AP   G++ +
Sbjct: 531  AAAGNNSVNGNVAGAGSNGTGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESN 590

Query: 569  ALHNFELDLSPDLLNRYGGAQGAPAAFMARRQQLEARYGIPIPSNDGKRHSLTLTVDDYK 390
             LHNFEL +S  LL ++GGAQGA A FMAR+Q++EA  G  +  NDG+RH+LTLTV DYK
Sbjct: 591  MLHNFELPISLALLQKFGGAQGAQAGFMARKQKIEATVGFRVSENDGRRHALTLTVSDYK 650

Query: 389  RRRGLM 372
            RRRGL+
Sbjct: 651  RRRGLL 656


>ref|XP_006300844.1| hypothetical protein CARUB_v10019938mg [Capsella rubella]
            gi|482569554|gb|EOA33742.1| hypothetical protein
            CARUB_v10019938mg [Capsella rubella]
          Length = 644

 Score =  436 bits (1121), Expect = e-119
 Identities = 281/653 (43%), Positives = 352/653 (53%), Gaps = 34/653 (5%)
 Frame = -2

Query: 2228 MADLENLFLECAGRSMSLDGHQDNSKTRKRRPSFSDSENGSDSNKYSEPDDSDQDDEMPN 2049
            M DLENL LE AGR+      + +     RR   S S+  SDS      DDSD D    +
Sbjct: 1    MGDLENLLLEAAGRTNPAGKSRHSHPPSSRRREGSYSDGSSDSR-----DDSDDDRGFAS 55

Query: 2048 LKHS--KMPLKKRFET--------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1917
             K S  ++PLKKR E                                             
Sbjct: 56   RKPSGSQVPLKKRLEAEREDRAARNESGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKL 115

Query: 1916 XXXXEFEREMLLAERAEKRDSKQLIKSAAERHPPSDSKKSXXXXXXXXQYREMRSSVRGA 1737
                EF+REM+LAERA+K+  K   +    +     +  S          R +RSS R A
Sbjct: 116  AGMTEFQREMILAERADKKGDKNFTEKLRSKRENEKTPVSKKETQPLPASRGVRSSARSA 175

Query: 1736 DKGKAR--ALTELIAKKRKAQDTDSQRRRNDKA-----SKDSSPXXXXXXXXXXXXXXXX 1578
            D+  A+  AL EL AK+ K QD  + R+  D +     S+D S                 
Sbjct: 176  DRAAAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSLKRKPLASSNLSNSSQ 235

Query: 1577 XXSHEGSP---RGNKRGKXXXXXXDSGAASYADICKITIKRSKLAKWFMEPFFESIIEGC 1407
              S   S     G+  G        S   ++ DI +ITI+RSKLAKW MEPFFE +I GC
Sbjct: 236  SDSDSRSQSDDEGSNAG-LDSDDDRSDMPTFEDIKEITIRRSKLAKWLMEPFFEELIVGC 294

Query: 1406 FVRLGIGEKHGRRYYRLCRVKNVDASSTDPKKKYTFEKRATFKYLNCFWGDESNAARWQM 1227
            FVR+GIG       YRLC V+NVDA  TDP K Y  E + T KYLN  WG+E++AARWQM
Sbjct: 295  FVRVGIGRSKSGPIYRLCMVRNVDA--TDPDKTYKLENKTTHKYLNVIWGNETSAARWQM 352

Query: 1226 IRVSDSSPDELEYIDLREEMERKGGKMIRTDEVEEKLTQLEQINNYVYSAETVKQMLQEK 1047
              +SD  P E EY     E+ER  G+M    ++ EK   +++IN+++YSAETVKQMLQEK
Sbjct: 353  AMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIKRINSFIYSAETVKQMLQEK 412

Query: 1046 KMASQRPSNIAAEKEKLRKELMHAESMEDQEEAERIRMKLRELEVISNQSKNKNEKALML 867
            K AS RP N+AAEK++LRKEL  A+S  D+   ERI+ K+++L+  S   K  ++KAL L
Sbjct: 413  KSASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKTKIKQLDA-SRNKKGVDKKALKL 471

Query: 866  AEMNRKNRAENFRVASESKRANANLKAGEAGYDPFSRRWTRSHNYYASKVSNANEAVPEA 687
            AEMN+KNRAENF+ ASE K   A+LK GEAGYDPFSRRWTRS NYY  K      A  EA
Sbjct: 472  AEMNKKNRAENFKNASEVKSITASLKVGEAGYDPFSRRWTRSSNYYNGKNKGKEGAENEA 531

Query: 686  E-KQPEETK-------VEETEKDMKVAVEEGKLINTEAPPCIGSKVHALHNFELDLSPDL 531
                  ET        VE TE  ++ A E GKLI+T AP   G++ + LHNFEL +S   
Sbjct: 532  AVAAAVETNGVDAGAGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQLHNFELSVSLAA 591

Query: 530  LNRYGGAQGAPAAFMARRQQLEARYGIPIPSNDGKRHSLTLTVDDYKRRRGLM 372
            L +YGG QG   AFMAR+Q  EA  G  +  NDGKRH LTLTV DYKRRRGL+
Sbjct: 592  LQKYGGPQGVQKAFMARKQVTEATVGCRVAENDGKRHGLTLTVSDYKRRRGLL 644


>gb|ESW31293.1| hypothetical protein PHAVU_002G226300g [Phaseolus vulgaris]
          Length = 654

 Score =  436 bits (1120), Expect = e-119
 Identities = 278/665 (41%), Positives = 367/665 (55%), Gaps = 46/665 (6%)
 Frame = -2

Query: 2228 MADLENLFLECAGRSMSLDGHQDNSKTRKRRPSFSDSENGSDSNKYSEPDDSDQDDEMPN 2049
            MADLENL LE AGR+ +   ++ +    +RR   + S+ GSDS       D D DDE+  
Sbjct: 1    MADLENLLLEAAGRTGTSGRNRHSLPPSRRRHDGAYSDGGSDSR------DDDSDDELNY 54

Query: 2048 LKH----SKMPLKKRFETGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEF------ 1899
                   S++PLKKR +                                   +       
Sbjct: 55   ASRKPSGSQVPLKKRLDPSERDDDLGSQEEADDDDGHSDHDGDSSDESNIGDDLYKDEDD 114

Query: 1898 ----------EREMLLAERAEKRDSKQLIKSAAERHPPSDSKKSXXXXXXXXQYREMRSS 1749
                      +REM+L++RA K+D K L+   A +                   R MR+S
Sbjct: 115  RRKLSEMTELQREMILSDRATKKDDKNLLGKIASKREKGKVSVPRKQSPPMSSSR-MRAS 173

Query: 1748 VRGADKG-KARALTELIAKKRKAQDTDSQRRRNDKASKDSSPXXXXXXXXXXXXXXXXXX 1572
             R AD+  K  AL EL AK+ K QD ++ R+  + AS+++ P                  
Sbjct: 174  ARSADRSAKNDALNELRAKRLKQQDPEAHRKLRE-ASRNAGPRHFSPPKRKPFTSTSLSS 232

Query: 1571 SH------------EGSPRGNKRGKXXXXXXDSGAA--SYADICKITIKRSKLAKWFMEP 1434
            S             EGS      G        +G+   S+ DI +ITI+RSKLAKWFMEP
Sbjct: 233  SSHSESESRSHSDDEGSTGDGGIGDSDDDRALTGSEGPSFQDIKEITIRRSKLAKWFMEP 292

Query: 1433 FFESIIEGCFVRLGIGEKHGRRYYRLCRVKNVDASSTDPKKKYTFEKRATFKYLNCFWGD 1254
            FFE +I GCFVR+GIG       YRLC VKNVDAS  +P ++Y  E + T+KYLN  WG+
Sbjct: 293  FFEELIVGCFVRVGIGRSKTGPIYRLCMVKNVDAS--EPDRQYKLENKTTYKYLNVVWGN 350

Query: 1253 ESNAARWQMIRVSDSSPDELEYIDLREEMERKGGKMIRTDEVEEKLTQLEQINNYVYSAE 1074
            ES+AARWQM  VSDS+P E E+    +E++R GG+M    +V EK   +++   +VYSA 
Sbjct: 351  ESSAARWQMAMVSDSAPLEEEFKQWVKEVDRSGGRMPTKQDVLEKKQAIQKAITFVYSAA 410

Query: 1073 TVKQMLQEKKMASQRPSNIAAEKEKLRKELMHAESMEDQEEAERIRMKLRELEVISNQSK 894
            TVKQMLQEKK AS RP N+AAEK++LR+EL  A+S  D+ E +RI+ +L+ELE  S  +K
Sbjct: 411  TVKQMLQEKKSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVDRIKARLQELEA-SRHAK 469

Query: 893  NKNEKALMLAEMNRKNRAENFRVASESKRANANLKAGEAGYDPFSRRWTRSHNYY-ASKV 717
             K+ KAL LAEMNRKNR ENF+ ASE K  N  LKAGEAGYDPFSRRWTRS NYY   K 
Sbjct: 470  QKDAKALKLAEMNRKNRFENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYTGEKA 529

Query: 716  SNANEAVPEAEKQP----------EETKVEETEKDMKVAVEEGKLINTEAPPCIGSKVHA 567
            +  N +V      P           E  +  T   ++ A + GKL++T AP   G++ + 
Sbjct: 530  AAGNNSVNGIVAGPGTNSTGAPVTAEAGLVATAAALEAAADAGKLVDTSAPVDQGTESNM 589

Query: 566  LHNFELDLSPDLLNRYGGAQGAPAAFMARRQQLEARYGIPIPSNDGKRHSLTLTVDDYKR 387
            LHNFEL +S  LL +YGGAQGA A FMAR+Q++E+  G  +  NDG+RHSLTL+V DYKR
Sbjct: 590  LHNFELPISLALLQKYGGAQGAQAGFMARKQRIESTVGFRVLENDGRRHSLTLSVSDYKR 649

Query: 386  RRGLM 372
            RRGL+
Sbjct: 650  RRGLL 654


>ref|XP_004302289.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
            vesca subsp. vesca]
          Length = 679

 Score =  430 bits (1105), Expect = e-117
 Identities = 276/663 (41%), Positives = 361/663 (54%), Gaps = 39/663 (5%)
 Frame = -2

Query: 2243 KEARAMADLENLFLECAGRSMSLDGHQDNSKTRKRRPSFSDSENGSDSNKYSEPDDSDQD 2064
            KE   MADLENL LE AGR+ +   ++    T ++R   S S++ SDS      +DSD  
Sbjct: 26   KETATMADLENLLLEAAGRTGAAVKNRQQLPTSRKRHGGSFSDDESDSGD----EDSDGG 81

Query: 2063 DEMPNLKHSKMPLKKRF---------ETGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1911
                + K S++PLKKRF         E                                 
Sbjct: 82   RNHASRKPSQVPLKKRFDPAERGSDEEHDDASDHESENSDESDLGTDLYKDDADRRRLSE 141

Query: 1910 XXEFEREMLLAERAEKRDSKQLIKSAAERHPPSDSKKSXXXXXXXXQYREMRSSVRGADK 1731
              E EREM+L  RAEK+D K+ ++    +     S +S          R +RSS R A+K
Sbjct: 142  MTELEREMILTNRAEKKDGKKFMEKLRSKRDKERSIQSKKESSSVPFSRGVRSSARTAEK 201

Query: 1730 GKAR--ALTELIAKKRKAQDTDSQRRRNDKA-----SKDSSPXXXXXXXXXXXXXXXXXX 1572
              A   AL++L  K+ K QD+ ++    D +     S+D SP                  
Sbjct: 202  SAALGDALSQLREKRLKQQDSKARSSLRDSSKENVGSQDFSPIKRKSLVAESLIDSDQNE 261

Query: 1571 SHEGSPRGNKRGKXXXXXXDSG------AASYADICKITIKRSKLAKWFMEPFFESIIEG 1410
             +EG  +    G                  +Y DI  ITI RSKLAKW MEPFFE +I G
Sbjct: 262  -NEGGLQTEDVGSASDNEFSDSDEEKVEPPTYQDIKDITIPRSKLAKWCMEPFFEELIVG 320

Query: 1409 CFVRLGIGEKHGRRYYRLCRVKNVDASSTDPKKKYTFEKRATFKYLNCFWGDESNAARWQ 1230
            CFVRLG G+      Y+LC V+NVDA  TD  ++Y  E + T KYLNC WG ES+A++WQ
Sbjct: 321  CFVRLGFGKSSSGPIYKLCMVQNVDA--TDLNRQYQLEGKMTHKYLNCVWGSESSASKWQ 378

Query: 1229 MIRVSDSSPDELEYIDLREEMERKGGKMIRTDEVEEKLTQLEQINNYVYSAETVKQMLQE 1050
            M  VS+S+P+E EY D   E++R  G M    +V EK   L++ N +VYSA TVKQMLQE
Sbjct: 379  MAMVSNSAPEEEEYNDWIREVKRSAGYMPSKHDVLEKRETLQKSNTFVYSATTVKQMLQE 438

Query: 1049 KKMASQRPSNIAAEKEKLRKELMHAESMEDQEEAERIRMKLRELEVISNQSKNKNEKALM 870
            K+ AS RP NIA EK++LR++L  AES  D EE  RI+ +L+ELE  S QS+ K+ KA+ 
Sbjct: 439  KR-ASARPVNIAVEKDRLRRQLEVAESKHDMEEVGRIKTRLQELEA-SRQSQEKDSKAIR 496

Query: 869  LAEMNRKNRAENFRVASESKRANANLKAGEAGYDPFSRRWTRSHNYYASKVSNANEAVPE 690
            LAEMNRKNR ENF+ AS  K  N NLKAGEAGYDPFSRRWTRS NYY  K    +EA  +
Sbjct: 497  LAEMNRKNRFENFKNASGLKPINTNLKAGEAGYDPFSRRWTRSRNYYVGKPGGGDEAAED 556

Query: 689  -----------AEKQPEETKV------EETEKDMKVAVEEGKLINTEAPPCIGSKVHALH 561
                       A     E KV      + T   ++ A   GKL++T AP    ++ + LH
Sbjct: 557  ETAEAANGFLGASNDKAEAKVMGEFGVKATAAALEAAAGAGKLVDTRAPVDQATEAYTLH 616

Query: 560  NFELDLSPDLLNRYGGAQGAPAAFMARRQQLEARYGIPIPSNDGKRHSLTLTVDDYKRRR 381
            NFEL +S   L ++GG  GAPAA+ AR+Q++EA  G  +P +DGKRH+LTL+V DYKRRR
Sbjct: 617  NFELPISLAGLQKFGGPHGAPAAYSARKQKIEATLGYKVPEDDGKRHALTLSVSDYKRRR 676

Query: 380  GLM 372
            GL+
Sbjct: 677  GLL 679


>gb|EXB82802.1| RNA polymerase-associated protein RTF1-like protein [Morus notabilis]
          Length = 658

 Score =  429 bits (1104), Expect = e-117
 Identities = 269/666 (40%), Positives = 359/666 (53%), Gaps = 47/666 (7%)
 Frame = -2

Query: 2228 MADLENLFLECAGRSMSLDGHQDNSKTRKRRPSFSDSENGSDSNKYSEPDDSDQDDEMPN 2049
            MA+LENL LE AGR+ S   ++ +    +RR   S S+ GSDS      DDSD D    N
Sbjct: 1    MAELENLLLEAAGRTRSAGRNRHSIPPSRRRREGSYSDGGSDSRD----DDSDDDRGYAN 56

Query: 2048 LKHS--KMPLKKRF-------------ETGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1914
             K S  ++PLKKR              E                                
Sbjct: 57   RKPSGSQVPLKKRLDPTEMDDDQGSEEEGDDDRGSDREGDSESDVGSDLYKDDDDRRKLA 116

Query: 1913 XXXEFEREMLLAERAEKRDSKQLIKSAAERHPPSDSKKSXXXXXXXXQYREMRSSVRGAD 1734
               E +REM+L +RA K++ K L K        +  K +            +RSS R AD
Sbjct: 117  EMTELQREMILLDRASKKEDKNL-KEKLRPKWDNKGKATQSRKETPLPSSRVRSSARSAD 175

Query: 1733 KGKAR--ALTELIAKKRKAQDTDSQRRRNDKASKDSSPXXXXXXXXXXXXXXXXXXSHEG 1560
            +  A+  AL EL AK+ K QD ++  +  D +   S                    S + 
Sbjct: 176  RAAAKDDALNELRAKRLKQQDPEAHGKLRDASRGGSGSRNLLHNKRKSYTATSLSSSSQS 235

Query: 1559 SPRGNKRGKXXXXXXDSG--------------AASYADICKITIKRSKLAKWFMEPFFES 1422
                  + +      D G                ++ DI ++T++RSKLAKW MEPFFE 
Sbjct: 236  DSESESQSEDEGSTGDGGMIDSDDERGIPGSEGLTFDDIKEVTVRRSKLAKWLMEPFFEE 295

Query: 1421 IIEGCFVRLGIGEKHGRRYYRLCRVKNVDASSTDPKKKYTFEKRATFKYLNCFWGDESNA 1242
            +I GCFVR+GIG       YRLC V+NVDAS  +P ++Y  + + T KYLN  WG+E++A
Sbjct: 296  LIVGCFVRVGIGRSKSGPIYRLCMVRNVDAS--EPDRQYKLDNKITHKYLNVVWGNENSA 353

Query: 1241 ARWQMIRVSDSSPDELEYIDLREEMERKGGKMIRTDEVEEKLTQLEQINNYVYSAETVKQ 1062
            ARWQM  VSDS P+E E+     E+ER GG+M    ++ +K   +++IN +VYSA TVKQ
Sbjct: 354  ARWQMAMVSDSVPNEEEFKQWVREVERSGGRMPTKHDILDKKESIKKINTFVYSAATVKQ 413

Query: 1061 MLQEKKMASQRPSNIAAEKEKLRKELMHAESMEDQEEAERIRMKLRELEVISNQSKNKNE 882
            MLQEKK AS RP NIA EK++LR+EL  A+S  D+ E +RI+ +L+ELE  S ++K  + 
Sbjct: 414  MLQEKKSASARPLNIALEKDRLRRELEVAQSKNDEVEVDRIKTRLQELEA-SRKAKQTDA 472

Query: 881  KALMLAEMNRKNRAENFRVASESKRANANLKAGEAGYDPFSRRWTRSHNYYASKVSNANE 702
            KA+ LAEMNRKNR ENF+ ASE K  N  LKAGEAGYDPFSRRWTRS NYY  K     E
Sbjct: 473  KAIRLAEMNRKNRVENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVGKPGEVKE 532

Query: 701  ----------AVPEAEKQ------PEETKVEETEKDMKVAVEEGKLINTEAPPCIGSKVH 570
                      A  +AE          E  +  TE  ++ A + GKL++T AP   G+  +
Sbjct: 533  DSGANAGNNGASTDAENNGRHGIVAAEAGIAATEAALEAAADAGKLVDTNAPVDQGTVSN 592

Query: 569  ALHNFELDLSPDLLNRYGGAQGAPAAFMARRQQLEARYGIPIPSNDGKRHSLTLTVDDYK 390
             LHNFEL +S  +L ++GG QGA A FMAR+Q++EA  G  +P NDG+RH+LTL+V DYK
Sbjct: 593  MLHNFELPISLSVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLSVGDYK 652

Query: 389  RRRGLM 372
            RRRGL+
Sbjct: 653  RRRGLL 658


>ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
            sativus] gi|449517636|ref|XP_004165851.1| PREDICTED: RNA
            polymerase-associated protein RTF1 homolog [Cucumis
            sativus]
          Length = 660

 Score =  428 bits (1100), Expect = e-117
 Identities = 277/669 (41%), Positives = 370/669 (55%), Gaps = 50/669 (7%)
 Frame = -2

Query: 2228 MADLENLFLECAGRSMSLDGHQDNSKTRKRRPSFSDSENGSDSNKYSEPDDSDQDDEMPN 2049
            MADLENL LE AGR+ +   ++ +    +R+   S S+ GSDS      DDSD D    +
Sbjct: 1    MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRD----DDSDDDRGYAS 56

Query: 2048 LKHS--KMPLKKRFET----------------GXXXXXXXXXXXXXXXXXXXXXXXXXXX 1923
             K S  ++PLKKR +                                             
Sbjct: 57   RKPSGSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRR 116

Query: 1922 XXXXXXEFEREMLLAERAEKRDSKQLIKSAAERHPPSDSKKSXXXXXXXXQYREMRSSVR 1743
                  E +REM+L++RA K++ K L +S   +     S  S          R +RSS R
Sbjct: 117  KLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSR-IRSSAR 175

Query: 1742 GADKGKAR--ALTELIAKKRKAQDTDSQRRRNDKA-----SKDSSPXXXXXXXXXXXXXX 1584
             AD+  A+  AL EL AK+ K QD ++ R+  D +     S+  SP              
Sbjct: 176  SADRAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSS 235

Query: 1583 XXXXSH-------EGSPR--GNKRGKXXXXXXDSGAASYADICKITIKRSKLAKWFMEPF 1431
                S        EGS    G            S   ++ DI ++TI+RSKLAKW MEPF
Sbjct: 236  SQSESESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPF 295

Query: 1430 FESIIEGCFVRLGIGEKHGRRYYRLCRVKNVDASSTDPKKKYTFEKRATFKYLNCFWGDE 1251
            FE +I GCFVR+GIG       YRLC V+NVDA  T+P ++Y  E + T KYLN  WG+E
Sbjct: 296  FEELIVGCFVRVGIGRSRSGPIYRLCLVRNVDA--TEPDRQYKLENKITHKYLNVIWGNE 353

Query: 1250 SNAARWQMIRVSDSSPDELEYIDLREEMERKGGKMIRTDEVEEKLTQLEQINNYVYSAET 1071
            ++AARWQM  VSDS+P E EY    +E+ER GG+M+   ++ EK   ++++NN+VYSA T
Sbjct: 354  ASAARWQMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAAT 413

Query: 1070 VKQMLQEKKMASQRPSNIAAEKEKLRKELMHAESMEDQEEAERIRMKLRELEVISNQSKN 891
            VKQMLQ+KK AS RP NIAAEK++LR+E+  A S  D+ E ERI+ +L++LE  S + + 
Sbjct: 414  VKQMLQDKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEA-SRRLQM 472

Query: 890  KNEKALMLAEMNRKNRAENFRVASESKRANANLKAGEAGYDPFSRRWTRSHNYYASKVSN 711
            K+ KA+ LAEMNRKNR ENF+ ASE  R   +LKAGEAGYDPFSRRWTRS NYY S    
Sbjct: 473  KDAKAIRLAEMNRKNRVENFKNASE-LRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGE 531

Query: 710  ANEAVPEAEKQP------EETKVE----------ETEKDMKVAVEEGKLINTEAPPCIGS 579
            AN A   A          E T+ E           T   ++ A   GKL++T AP   G+
Sbjct: 532  ANGAAEAAGNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGT 591

Query: 578  KVHALHNFELDLSPDLLNRYGGAQGAPAAFMARRQQLEARYGIPIPSNDGKRHSLTLTVD 399
            + ++LHNFEL +S  +L ++GGA GA A F+AR+Q++EA  G  +P NDG+RH+LTLTV 
Sbjct: 592  ESNSLHNFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVS 651

Query: 398  DYKRRRGLM 372
            DYKRRRGL+
Sbjct: 652  DYKRRRGLL 660


>gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus persica]
          Length = 646

 Score =  423 bits (1088), Expect = e-115
 Identities = 270/667 (40%), Positives = 362/667 (54%), Gaps = 48/667 (7%)
 Frame = -2

Query: 2228 MADLENLFLECAGRSMSLDGHQDNSKTRKRRPSFSDSENGSDSNKYSEPDDSDQDDEMPN 2049
            MADLENL LE AGR+ S    + +  + +RR   S S+ GSDS      DDSD      +
Sbjct: 1    MADLENLLLEAAGRTSSAGKSRHSHSSSRRRRGGSYSDGGSDSRG----DDSDDGRGYAS 56

Query: 2048 LKHS--KMPLKKRFETGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEF-------- 1899
             K S  ++PLKKR +                                    +        
Sbjct: 57   RKPSGTQVPLKKRLDPTEMDDEQGSQEEGDYNDSGSDRGGDSNESDVGSDLYKDEDDRRK 116

Query: 1898 -------EREMLLAERAEKRDSKQLIKSAAERH--PPSDSKKSXXXXXXXXQYREMRSSV 1746
                   +RE++L++RA+K+D K L +    +   PP  S +             +RSS 
Sbjct: 117  LAEMSELQRELILSDRAQKKDDKSLKEKFRPKKETPPLPSSR-------------VRSSA 163

Query: 1745 RGADKGKAR--ALTELIAKKRKAQDTDSQRRRNDKASKDSSPXXXXXXXXXXXXXXXXXX 1572
            R AD+  A+  AL EL AK+ K QD ++ R+  D AS+ SS                   
Sbjct: 164  RSADRAAAKDDALNELRAKRLKQQDPEAHRKLRD-ASRGSSGSRSFSHMTRKSFTAVGRS 222

Query: 1571 SHEGSPRGNKRGKXXXXXXD-----------SGAASYADICKITIKRSKLAKWFMEPFFE 1425
            S   S   ++                     S   ++ DI +ITI+RSKLAKW MEPFFE
Sbjct: 223  SSSQSDSDSRSHSEDDGSTGEDPMMDSDDERSEGLTFDDIKEITIRRSKLAKWLMEPFFE 282

Query: 1424 SIIEGCFVRLGIGEKHGRRYYRLCRVKNVDASSTDPKKKYTFEKRATFKYLNCFWGDESN 1245
             +I GCFVR+GIG       YRLC V+NVDAS  DP +KY  E + T KYLN  WG+E++
Sbjct: 283  ELIVGCFVRVGIGRSKSGPIYRLCMVRNVDAS--DPDRKYKLENKTTHKYLNVVWGNENS 340

Query: 1244 AARWQMIRVSDSSPDELEYIDLREEMERKGGKMIRTDEVEEKLTQLEQINNYVYSAETVK 1065
            AARWQM  +SDS+P E E+     E+ER GG++    +V EK   +++IN +VYSA TVK
Sbjct: 341  AARWQMAMISDSAPLEEEFKQWVREVERSGGRLPSKQDVLEKKEAIKKINTFVYSAATVK 400

Query: 1064 QMLQEKKMASQRPSNIAAEKEKLRKELMHAESMEDQEEAERIRMKLRELEVISNQSKNKN 885
            QM++EKK AS RP NIA EK++LR+EL  A+S  D  E ERI+ +L++LE    QS+ K+
Sbjct: 401  QMIEEKKSASSRPLNIALEKDRLRRELEVAQSKHDDAEVERIKTRLQQLEA-RRQSQGKD 459

Query: 884  EKALMLAEMNRKNRAENFRVASESKRANANLKAGEAGYDPFSRRWTRSHNYYASK----- 720
             KA+ LAEMNRKNR ENF+ ASE K     LKAGEAGYDPFSRRWTRS NYY SK     
Sbjct: 460  SKAVRLAEMNRKNRVENFKNASELKPVKTGLKAGEAGYDPFSRRWTRSRNYYVSKPGEQK 519

Query: 719  -----VSNANEAVPEAEKQ------PEETKVEETEKDMKVAVEEGKLINTEAPPCIGSKV 573
                 + +A+ A+ + E             +  T   ++ A   GKLI+T AP   G++ 
Sbjct: 520  GEAEAIVDADGALADIESNGTAVVGAVRAGMAATAAALEAAAGAGKLIDTSAPVDFGTES 579

Query: 572  HALHNFELDLSPDLLNRYGGAQGAPAAFMARRQQLEARYGIPIPSNDGKRHSLTLTVDDY 393
            + +HNFEL +S   L ++GG QGA   F+AR+Q++EA  G  +P NDG+RH+LTLTV DY
Sbjct: 580  NLMHNFELPISLATLQKFGGPQGAQEGFLARKQRIEATVGCRVPENDGRRHALTLTVSDY 639

Query: 392  KRRRGLM 372
            KRR GL+
Sbjct: 640  KRRMGLL 646