BLASTX nr result

ID: Ephedra25_contig00013378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00013378
         (1069 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006837406.1| hypothetical protein AMTR_s00111p00144160 [A...    62   5e-07
ref|XP_002304341.2| zinc finger family protein [Populus trichoca...    58   6e-06
ref|XP_004300410.1| PREDICTED: zinc finger CCCH domain-containin...    58   7e-06
ref|XP_004509736.1| PREDICTED: zinc finger CCCH domain-containin...    57   1e-05
ref|XP_003628788.1| Zinc finger CCCH domain-containing protein [...    57   1e-05

>ref|XP_006837406.1| hypothetical protein AMTR_s00111p00144160 [Amborella trichopoda]
           gi|548840024|gb|ERN00260.1| hypothetical protein
           AMTR_s00111p00144160 [Amborella trichopoda]
          Length = 372

 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 25/33 (75%), Positives = 28/33 (84%)
 Frame = +1

Query: 22  LSQRSGQRIMPKWKGPDKISRIYGDWIEDNEWE 120
           L+QR G +   KWKGPDKISRIYGDWI+DNEWE
Sbjct: 337 LNQRQGLKPFQKWKGPDKISRIYGDWIDDNEWE 369


>ref|XP_002304341.2| zinc finger family protein [Populus trichocarpa]
           gi|550342801|gb|EEE79320.2| zinc finger family protein
           [Populus trichocarpa]
          Length = 369

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = +1

Query: 16  NILSQRSGQRIMPKWKGPDKISRIYGDWIEDNE 114
           +IL QRSGQR   KWKGPDKISRIYGDWI+D E
Sbjct: 337 SILIQRSGQRTHEKWKGPDKISRIYGDWIDDIE 369


>ref|XP_004300410.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
           [Fragaria vesca subsp. vesca]
          Length = 346

 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 25/33 (75%), Positives = 28/33 (84%)
 Frame = +1

Query: 16  NILSQRSGQRIMPKWKGPDKISRIYGDWIEDNE 114
           +I+SQR GQR   KWKGPDKISRIYGDWI+D E
Sbjct: 314 SIVSQRPGQRAHQKWKGPDKISRIYGDWIDDME 346


>ref|XP_004509736.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
           [Cicer arietinum]
          Length = 381

 Score = 57.4 bits (137), Expect = 1e-05
 Identities = 25/33 (75%), Positives = 28/33 (84%)
 Frame = +1

Query: 16  NILSQRSGQRIMPKWKGPDKISRIYGDWIEDNE 114
           +I+SQR GQR   KWKGPDKISRIYGDWI+D E
Sbjct: 349 SIVSQRPGQRAHQKWKGPDKISRIYGDWIDDIE 381


>ref|XP_003628788.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355522810|gb|AET03264.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 376

 Score = 57.4 bits (137), Expect = 1e-05
 Identities = 25/33 (75%), Positives = 28/33 (84%)
 Frame = +1

Query: 16  NILSQRSGQRIMPKWKGPDKISRIYGDWIEDNE 114
           +I+SQR GQR   KWKGPDKISRIYGDWI+D E
Sbjct: 344 SIVSQRPGQRAHQKWKGPDKISRIYGDWIDDFE 376


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