BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00013375
         (615 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsi...    59   1e-06

>dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1499

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
 Frame = -3

Query: 604 ITLLRANDLLEIVLNGTIDKSQYELD------------KDVAAHTLLALAISDEITPIIR 461
           IT+L+   L +++ NG    S  E              KD+ A  +L  A+SD I P I 
Sbjct: 25  ITILKTRKLWDVIENGVTSNSSPETSPALTRERDDQVMKDMMALQILQSAVSDSIFPRIA 84

Query: 460 CETSAYRIWVKLKNQFGTRSAVK---LRLLMSNLENLKIKSGEKVDTLLRQVIEIHHQIE 290
             +SA   W  L+ +F   S VK   L+ L    ENLK++ GE ++    ++I + +Q+ 
Sbjct: 85  PASSATEAWNALEMEFQGSSQVKMINLQTLRREYENLKMEEGETINDFTTKLINLSNQLR 144

Query: 289 DQGKLLTYGDLIHYALKGLPKTFKDFVTHFD--NDNAKPIFDEFCNNLRMVENKINLQ 122
             G+  +   ++   L  +P+ F   V   +   D +     E    L+  E ++NL+
Sbjct: 145 VHGEEKSDYQVVQKILISVPQQFDSIVGVLEQTKDLSTLSVTELIGTLKAHERRLNLR 202