BLASTX nr result

ID: Ephedra25_contig00013324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00013324
         (1051 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001755573.1| predicted protein [Physcomitrella patens] gi...    46   4e-09
ref|XP_002983762.1| hypothetical protein SELMODRAFT_422943 [Sela...    46   4e-09
ref|XP_002990493.1| hypothetical protein SELMODRAFT_428953 [Sela...    46   4e-09

>ref|XP_001755573.1| predicted protein [Physcomitrella patens]
           gi|162693280|gb|EDQ79633.1| predicted protein
           [Physcomitrella patens]
          Length = 544

 Score = 46.2 bits (108), Expect(2) = 4e-09
 Identities = 20/31 (64%), Positives = 27/31 (87%)
 Frame = +3

Query: 153 SQTSSVEYFIRRFQAKELVTEMEVEYSFSNW 245
           S++ SVEYF RRF+A+++V+EMEVEY  SNW
Sbjct: 396 SESLSVEYFARRFRAQDIVSEMEVEYWSSNW 426



 Score = 42.4 bits (98), Expect(2) = 4e-09
 Identities = 19/23 (82%), Positives = 20/23 (86%)
 Frame = +2

Query: 245 VDYICTLYDQRVGVSVTRAMCHP 313
           VDYICTLY QRVGVSV+RAM  P
Sbjct: 429 VDYICTLYGQRVGVSVSRAMAFP 451


>ref|XP_002983762.1| hypothetical protein SELMODRAFT_422943 [Selaginella moellendorffii]
           gi|300148599|gb|EFJ15258.1| hypothetical protein
           SELMODRAFT_422943 [Selaginella moellendorffii]
          Length = 343

 Score = 45.8 bits (107), Expect(2) = 4e-09
 Identities = 20/35 (57%), Positives = 27/35 (77%)
 Frame = +3

Query: 141 DNYKSQTSSVEYFIRRFQAKELVTEMEVEYSFSNW 245
           D+   Q+ SVEYF+R+F+A ++VTEMEVEY   NW
Sbjct: 200 DSSCMQSLSVEYFVRKFKATDVVTEMEVEYCAMNW 234



 Score = 42.7 bits (99), Expect(2) = 4e-09
 Identities = 19/23 (82%), Positives = 20/23 (86%)
 Frame = +2

Query: 245 VDYICTLYDQRVGVSVTRAMCHP 313
           VDYIC LY QRVGVSVTRAM +P
Sbjct: 237 VDYICNLYGQRVGVSVTRAMSYP 259


>ref|XP_002990493.1| hypothetical protein SELMODRAFT_428953 [Selaginella moellendorffii]
           gi|300141661|gb|EFJ08370.1| hypothetical protein
           SELMODRAFT_428953 [Selaginella moellendorffii]
          Length = 272

 Score = 45.8 bits (107), Expect(2) = 4e-09
 Identities = 20/35 (57%), Positives = 27/35 (77%)
 Frame = +3

Query: 141 DNYKSQTSSVEYFIRRFQAKELVTEMEVEYSFSNW 245
           D+   Q+ SVEYF+R+F+A ++VTEMEVEY   NW
Sbjct: 120 DSSCMQSLSVEYFVRKFKATDVVTEMEVEYCAMNW 154



 Score = 42.7 bits (99), Expect(2) = 4e-09
 Identities = 19/23 (82%), Positives = 20/23 (86%)
 Frame = +2

Query: 245 VDYICTLYDQRVGVSVTRAMCHP 313
           VDYIC LY QRVGVSVTRAM +P
Sbjct: 157 VDYICNLYGQRVGVSVTRAMSYP 179


Top