BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00013102
         (1082 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE77866.1| unknown [Picea sitchensis]                             430   e-118
gb|EOX97059.1| Pseudouridine synthase family protein isoform 1 [...   383   e-104
ref|XP_004485453.1| PREDICTED: tRNA pseudouridine synthase A-lik...   381   e-103
ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-lik...   379   e-102
gb|EOX97061.1| Pseudouridine synthase family protein isoform 3 [...   376   e-102
ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase-like ...   373   e-101
ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vi...   371   e-100
ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycin...   368   3e-99
ref|XP_006858556.1| hypothetical protein AMTR_s00071p00170380 [A...   367   4e-99
gb|ABE79574.2| tRNA pseudouridine synthase [Medicago truncatula]      366   1e-98
ref|XP_006389535.1| hypothetical protein POPTR_0022s00690g [Popu...   365   1e-98
ref|XP_006471140.1| PREDICTED: tRNA pseudouridine synthase-like ...   365   2e-98
ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus ...   365   2e-98
ref|XP_002331109.1| predicted protein [Populus trichocarpa]           362   1e-97
ref|NP_172451.2| pseudouridine synthase family protein [Arabidop...   362   2e-97
dbj|BAD44444.1| unnamed protein product [Arabidopsis thaliana] g...   362   2e-97
gb|AAT06466.1| At1g09800 [Arabidopsis thaliana]                       362   2e-97
gb|ESW20555.1| hypothetical protein PHAVU_006G218900g [Phaseolus...   361   2e-97
ref|XP_006417534.1| hypothetical protein EUTSA_v10007981mg [Eutr...   361   3e-97
ref|XP_004161929.1| PREDICTED: tRNA pseudouridine synthase A-lik...   361   3e-97

>gb|ADE77866.1| unknown [Picea sitchensis]
          Length = 382

 Score =  430 bits (1105), Expect = e-118
 Identities = 224/335 (66%), Positives = 255/335 (76%), Gaps = 4/335 (1%)
 Frame = +1

Query: 88   GVQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFTKFVGQPVSSMVSSRTDTGVHAL 267
            GVQRYLVA++Y GTNFAG QKQP   RTVQGVLEDAF KF+GQPVSS  SSRTD GVHAL
Sbjct: 27   GVQRYLVAVDYIGTNFAGMQKQPN-FRTVQGVLEDAFNKFIGQPVSSASSSRTDAGVHAL 85

Query: 268  MNVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQKAGGDLMIVDVQKVPMDFHARFR 447
             NV HVD+ERISKR PGEVLPPHEP+VV++AVNHFLQK  GD+ I+DV+ VPM FHAR+R
Sbjct: 86   TNVCHVDVERISKRKPGEVLPPHEPEVVKRAVNHFLQKDAGDISIIDVRFVPMTFHARYR 145

Query: 448  AQERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQEACRILVGHHDFSSFRAAGCQA 627
            AQERTY+YRILSG++PLS+FEKD+AWHV EDL L  MQEAC++LVGHHDFSSFRA+GCQA
Sbjct: 146  AQERTYYYRILSGKEPLSIFEKDRAWHVPEDLGLSCMQEACKVLVGHHDFSSFRASGCQA 205

Query: 628  KSPIKTLDELFVCEMPTWPNFSPCM----TANASAAVERKVSISTTERIGDSDSSVVVER 795
            KSPIK LDEL VCEMP WP F   +      N SA   + VS   +E     D+ V +E 
Sbjct: 206  KSPIKILDELRVCEMPAWPAFPMSIDRTSRVNISATSCKHVS---SEGKASFDNPVEMEG 262

Query: 796  NRENFDATFTECDNGGILCQNPNGDSLGINGCGFGRKKGHRGYVVVARARSFLYHQVRLL 975
                    F       +LCQ  NG+        FG ++GHRGYVVVARA+SFLYHQVRLL
Sbjct: 263  QVSLSKERFMNHGQPDMLCQEENGNFGQDEVLEFGHRRGHRGYVVVARAQSFLYHQVRLL 322

Query: 976  VGTLKSVGTGKISCDDVEKILKARTITSAPPMAPS 1080
            VGTLK VGTGK+S DDVE ILKARTIT APPMAP+
Sbjct: 323  VGTLKCVGTGKLSVDDVESILKARTITVAPPMAPA 357


>gb|EOX97059.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
          Length = 374

 Score =  383 bits (983), Expect = e-104
 Identities = 203/353 (57%), Positives = 250/353 (70%)
 Frame = +1

Query: 22   EEPNKDDHYLSKLARTQEPPMSGVQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFT 201
            +E  ++D    + + ++ P    +QRYLVAIEY GT F+GSQ+QP   RTV GVLE+AF 
Sbjct: 30   QEEEEEDKQQQESSMSKNPR---IQRYLVAIEYIGTRFSGSQQQPNC-RTVVGVLEEAFL 85

Query: 202  KFVGQPVSSMVSSRTDTGVHALMNVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQK 381
            KF+GQPVS   SSRTD GVHAL NV HVD+ERISKR PGEVLPPHEP VVR+AVNHFLQK
Sbjct: 86   KFIGQPVSIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAVNHFLQK 145

Query: 382  AGGDLMIVDVQKVPMDFHARFRAQERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQ 561
            + GD+ ++DV+ VP DFHAR++AQERTYFYR+LSG +PLS FEK++AWHV E LDL  MQ
Sbjct: 146  SEGDITVIDVRCVPNDFHARYKAQERTYFYRLLSGSEPLSTFEKERAWHVPEKLDLYAMQ 205

Query: 562  EACRILVGHHDFSSFRAAGCQAKSPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVS 741
            EAC++LVGHHDFSSFRAAGCQAKSPI+TLDEL V E P  P F         +  E+K +
Sbjct: 206  EACKVLVGHHDFSSFRAAGCQAKSPIRTLDELHVSEAPPTPYF--------PSISEKKQN 257

Query: 742  ISTTERIGDSDSSVVVERNRENFDATFTECDNGGILCQNPNGDSLGINGCGFGRKKGHRG 921
             S+TE          ++   ++F  +  E              S GI   GFG ++ H  
Sbjct: 258  NSSTEDSHACSREPEIDLPIDSFSNSDDEV------------GSNGITDLGFGIRRRHHC 305

Query: 922  YVVVARARSFLYHQVRLLVGTLKSVGTGKISCDDVEKILKARTITSAPPMAPS 1080
            YVV ARARSFLYHQVRLLVG LK VGTG+++  DVE+IL A+T+T+A PMAP+
Sbjct: 306  YVVTARARSFLYHQVRLLVGVLKCVGTGELTTSDVERILNAKTVTAASPMAPA 358


>ref|XP_004485453.1| PREDICTED: tRNA pseudouridine synthase A-like isoform X1 [Cicer
            arietinum]
          Length = 374

 Score =  381 bits (978), Expect = e-103
 Identities = 201/331 (60%), Positives = 242/331 (73%), Gaps = 1/331 (0%)
 Frame = +1

Query: 91   VQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFTKFVGQPVSSMVSSRTDTGVHALM 270
            +QRYLVAIEY GT+F+GSQKQ T  RTV GVLE+AF KFVGQPVS + SSRTD GVHAL 
Sbjct: 54   IQRYLVAIEYIGTHFSGSQKQLTD-RTVVGVLEEAFCKFVGQPVSVICSSRTDAGVHALS 112

Query: 271  NVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQKAGGDLMIVDVQKVPMDFHARFRA 450
            NV HVD+ERISKR PGEVLPPHEP VVR+AVNHFLQK  GDLM++DV+ VP DFHAR++A
Sbjct: 113  NVCHVDIERISKRKPGEVLPPHEPVVVRRAVNHFLQKQNGDLMVIDVRCVPSDFHARYKA 172

Query: 451  QERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQEACRILVGHHDFSSFRAAGCQAK 630
            QERTYFYR+LSG +PLS  EKD+AWHV E+L+LP MQEACR+LVGHHDFSSFRAAGCQAK
Sbjct: 173  QERTYFYRLLSGSEPLSTLEKDRAWHVPEELNLPAMQEACRVLVGHHDFSSFRAAGCQAK 232

Query: 631  SPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVSIS-TTERIGDSDSSVVVERNREN 807
            SPI+TLDEL V E+   P F   M        ER++ ++      G +  +V+   +   
Sbjct: 233  SPIRTLDELSVVEVIQSPYFPSVMDR------ERQIKVADDLHGCGSNAEAVIPVSSSAR 286

Query: 808  FDATFTECDNGGILCQNPNGDSLGINGCGFGRKKGHRGYVVVARARSFLYHQVRLLVGTL 987
             D       N G+               GFG+++ HR  VV ARAR+FLYHQVRLLVG L
Sbjct: 287  IDK--VRASNEGV---------------GFGKRRYHRCLVVTARARAFLYHQVRLLVGVL 329

Query: 988  KSVGTGKISCDDVEKILKARTITSAPPMAPS 1080
            K+VGTG ++  DVE+IL A+T+T+A PMAP+
Sbjct: 330  KAVGTGNLTIPDVERILNAKTVTAASPMAPA 360


>ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-like [Fragaria vesca subsp.
            vesca]
          Length = 350

 Score =  379 bits (973), Expect = e-102
 Identities = 205/361 (56%), Positives = 248/361 (68%), Gaps = 1/361 (0%)
 Frame = +1

Query: 1    EQRKRSLEEPNKDDHYLSKLARTQEPPM-SGVQRYLVAIEYDGTNFAGSQKQPTTIRTVQ 177
            E R +S + P+K     S+ A  +      G+QRYL+AIEY GT F+GSQ+Q +  RTV 
Sbjct: 10   ESRSQSPKRPSKISKTTSEEAEAESMSKPQGIQRYLIAIEYIGTRFSGSQQQ-SNCRTVV 68

Query: 178  GVLEDAFTKFVGQPVSSMVSSRTDTGVHALMNVFHVDLERISKRNPGEVLPPHEPDVVRK 357
            GVLE+AF KF+GQPVS   SSRTD GVHAL NV HVD+ERISKR PGEVLPPHEP VV++
Sbjct: 69   GVLEEAFRKFIGQPVSIFCSSRTDAGVHALSNVCHVDIERISKRKPGEVLPPHEPIVVQR 128

Query: 358  AVNHFLQKAGGDLMIVDVQKVPMDFHARFRAQERTYFYRILSGEDPLSVFEKDKAWHVTE 537
            AVNHFLQK  GD+M+VDV+ VP DFHARF+AQERTYFYR+LSG +PLS FEKD+AWH+ E
Sbjct: 129  AVNHFLQKNEGDVMVVDVRSVPADFHARFKAQERTYFYRLLSGPEPLSTFEKDRAWHIPE 188

Query: 538  DLDLPKMQEACRILVGHHDFSSFRAAGCQAKSPIKTLDELFVCEMPTWPNFSPCMTANAS 717
            +LD+  MQEAC+ILVGHHDFSSFRAAGCQAKSPI+TLDEL V E+ + PNF P +     
Sbjct: 189  ELDVLAMQEACKILVGHHDFSSFRAAGCQAKSPIRTLDELNVSEVVSSPNF-PTIAERTR 247

Query: 718  AAVERKVSISTTERIGDSDSSVVVERNRENFDATFTECDNGGILCQNPNGDSLGINGCGF 897
              V++ +  +                   N +A      NGG                GF
Sbjct: 248  NLVQKDIQCT------------------NNPEADCHSSFNGG-------------TDQGF 276

Query: 898  GRKKGHRGYVVVARARSFLYHQVRLLVGTLKSVGTGKISCDDVEKILKARTITSAPPMAP 1077
            G +K HR  VV ARAR+FLYHQVRLLVG LK VGTG +   DVE+IL A+T+T+A PMAP
Sbjct: 277  GLRKKHRCIVVTARARAFLYHQVRLLVGVLKCVGTGDLKIPDVERILNAKTVTAASPMAP 336

Query: 1078 S 1080
            +
Sbjct: 337  A 337


>gb|EOX97061.1| Pseudouridine synthase family protein isoform 3 [Theobroma cacao]
          Length = 373

 Score =  376 bits (966), Expect = e-102
 Identities = 202/353 (57%), Positives = 248/353 (70%)
 Frame = +1

Query: 22   EEPNKDDHYLSKLARTQEPPMSGVQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFT 201
            +E  ++D    + + ++ P    +QRYLVAIEY GT F+GSQ+QP   RTV GVLE+AF 
Sbjct: 30   QEEEEEDKQQQESSMSKNPR---IQRYLVAIEYIGTRFSGSQQQPNC-RTVVGVLEEAFL 85

Query: 202  KFVGQPVSSMVSSRTDTGVHALMNVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQK 381
            KF+GQPVS   SSRTD GVHAL NV HVD+ERISKR PGEVLPPHEP VVR+AVNHFLQ 
Sbjct: 86   KFIGQPVSIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAVNHFLQS 145

Query: 382  AGGDLMIVDVQKVPMDFHARFRAQERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQ 561
             G D+ ++DV+ VP DFHAR++AQERTYFYR+LSG +PLS FEK++AWHV E LDL  MQ
Sbjct: 146  EG-DITVIDVRCVPNDFHARYKAQERTYFYRLLSGSEPLSTFEKERAWHVPEKLDLYAMQ 204

Query: 562  EACRILVGHHDFSSFRAAGCQAKSPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVS 741
            EAC++LVGHHDFSSFRAAGCQAKSPI+TLDEL V E P  P F         +  E+K +
Sbjct: 205  EACKVLVGHHDFSSFRAAGCQAKSPIRTLDELHVSEAPPTPYF--------PSISEKKQN 256

Query: 742  ISTTERIGDSDSSVVVERNRENFDATFTECDNGGILCQNPNGDSLGINGCGFGRKKGHRG 921
             S+TE          ++   ++F  +  E              S GI   GFG ++ H  
Sbjct: 257  NSSTEDSHACSREPEIDLPIDSFSNSDDEV------------GSNGITDLGFGIRRRHHC 304

Query: 922  YVVVARARSFLYHQVRLLVGTLKSVGTGKISCDDVEKILKARTITSAPPMAPS 1080
            YVV ARARSFLYHQVRLLVG LK VGTG+++  DVE+IL A+T+T+A PMAP+
Sbjct: 305  YVVTARARSFLYHQVRLLVGVLKCVGTGELTTSDVERILNAKTVTAASPMAPA 357


>ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Glycine max]
          Length = 369

 Score =  373 bits (957), Expect = e-101
 Identities = 205/336 (61%), Positives = 239/336 (71%), Gaps = 2/336 (0%)
 Frame = +1

Query: 79   PMSGVQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFTKFVGQPVSSMVSSRTDTGV 258
            P +G+QRYLVAIEY GT F+GSQKQ   +RTV G LE+AF+KFVGQPVS   SSRTD GV
Sbjct: 44   PRNGIQRYLVAIEYIGTLFSGSQKQ-LNVRTVVGALEEAFSKFVGQPVSVSCSSRTDAGV 102

Query: 259  HALMNVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQKAGGDLMIVDVQKVPMDFHA 438
            HAL NV HVD++RISKR PGEVLPPHEP VV +AVNHFLQK   DLM++DV+ VP DFHA
Sbjct: 103  HALSNVCHVDIQRISKRRPGEVLPPHEPAVVGRAVNHFLQKHDSDLMVIDVRCVPSDFHA 162

Query: 439  RFRAQERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQEACRILVGHHDFSSFRAAG 618
            RF+AQERTYFYR+LSG +PLS FEKD+AWHV E+L LP MQEACR+LVG HDFSSFRAAG
Sbjct: 163  RFKAQERTYFYRLLSGPEPLSTFEKDRAWHVPEELSLPAMQEACRVLVGCHDFSSFRAAG 222

Query: 619  CQAKSPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVSISTTERIGDSDSSVVVERN 798
            CQAKSPI+TLDEL V E+   P F   M          KVS       GD  S       
Sbjct: 223  CQAKSPIRTLDELSVNEVIESPYFPSLMDREQ----HNKVS-------GDLRSC------ 265

Query: 799  RENFDATFTECDNGGILCQNPNGDSL--GINGCGFGRKKGHRGYVVVARARSFLYHQVRL 972
                 +  TE D   I   NP+ D +       GFG+++ HR  VV ARARSFLYHQVRL
Sbjct: 266  -----SNNTETDIPPI--SNPSIDKVITSSQDAGFGKRRRHRCLVVTARARSFLYHQVRL 318

Query: 973  LVGTLKSVGTGKISCDDVEKILKARTITSAPPMAPS 1080
            LVG LK+ GTG ++  DVE+IL A+T+T+A PMAP+
Sbjct: 319  LVGVLKAAGTGNLTIPDVERILNAKTVTAASPMAPA 354


>ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vitis vinifera]
            gi|297739525|emb|CBI29707.3| unnamed protein product
            [Vitis vinifera]
          Length = 380

 Score =  371 bits (953), Expect = e-100
 Identities = 206/362 (56%), Positives = 249/362 (68%), Gaps = 4/362 (1%)
 Frame = +1

Query: 7    RKRSLEEPNKDDHYLSKLARTQEPPMSGVQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVL 186
            R   L +  + D   SK   TQ P    VQRYLVA+EY GT F+GSQ+Q    RTV G L
Sbjct: 37   RTDDLSDGEQQDSVASK-TMTQNPR---VQRYLVAVEYIGTRFSGSQQQ-LNCRTVAGAL 91

Query: 187  EDAFTKFVGQPVSSMVSSRTDTGVHALMNVFHVDLERISKRNPGEVLPPHEPDVVRKAVN 366
            ++AF KF+GQPVS   SSRTD GVHAL NV HVD+ERISKR PGEVLPPHEP VVR+AVN
Sbjct: 92   QEAFHKFIGQPVSIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPAVVRRAVN 151

Query: 367  HFLQKAGGDLMIVDVQKVPMDFHARFRAQERTYFYRILSGEDPLSVFEKDKAWHVTEDLD 546
            HFLQK  GD+M++DV+ VP DFHAR++A+ERTYFYR+LSG +PLS FEKD+AWHV EDLD
Sbjct: 152  HFLQKNEGDVMVIDVRCVPPDFHARYKARERTYFYRLLSGPEPLSSFEKDRAWHVPEDLD 211

Query: 547  LPKMQEACRILVGHHDFSSFRAAGCQAKSPIKTLDELFVCEMPTWPNFSPCMTANA--SA 720
            L  MQ+ACR+LVG HDFSSFRAAGCQAKSPI+TLDEL V E+   P F P +T  A  + 
Sbjct: 212  LLAMQKACRVLVGCHDFSSFRAAGCQAKSPIRTLDELCVSEVLPTPYF-PSITERAQNNF 270

Query: 721  AVERKVSISTTERIGDSDSSVVVERNRENFDATFTECDNGGILCQNPNGDSLGINGC--G 894
              E  ++ S    + DS S+     N +  D                     G NG   G
Sbjct: 271  TEENPLACSNNAEVPDSPSTA----NHDRLD---------------------GFNGAGQG 305

Query: 895  FGRKKGHRGYVVVARARSFLYHQVRLLVGTLKSVGTGKISCDDVEKILKARTITSAPPMA 1074
            FG ++ HR ++V ARARSFLYHQVRLLVG +K VGTG ++  DVE+IL A+T+T+A PMA
Sbjct: 306  FGVRRRHRCFLVTARARSFLYHQVRLLVGVIKCVGTGDLTVSDVERILNAKTVTAASPMA 365

Query: 1075 PS 1080
            P+
Sbjct: 366  PA 367


>ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycine max]
            gi|255637177|gb|ACU18919.1| unknown [Glycine max]
          Length = 370

 Score =  368 bits (944), Expect = 3e-99
 Identities = 203/336 (60%), Positives = 236/336 (70%), Gaps = 2/336 (0%)
 Frame = +1

Query: 79   PMSGVQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFTKFVGQPVSSMVSSRTDTGV 258
            P +G+QRYLVAIEY GT F+GSQKQ   +RTV GVLE+AF+KFVGQPVS   SSRT  GV
Sbjct: 45   PRNGIQRYLVAIEYIGTRFSGSQKQ-LNVRTVVGVLEEAFSKFVGQPVSVSCSSRTVAGV 103

Query: 259  HALMNVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQKAGGDLMIVDVQKVPMDFHA 438
            HAL NV HVD++RISKR PGEVL PHEP VV +AVNHFLQK   DLM++DV+ VP DFHA
Sbjct: 104  HALSNVCHVDIQRISKRRPGEVLTPHEPAVVGRAVNHFLQKQDSDLMVIDVRCVPSDFHA 163

Query: 439  RFRAQERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQEACRILVGHHDFSSFRAAG 618
            RF+AQER YFYR+LSG +PLS FEKD+AWHV E+L LP MQEACR+LVG HDFSSFRAAG
Sbjct: 164  RFKAQERIYFYRLLSGPEPLSTFEKDRAWHVPEELSLPAMQEACRVLVGFHDFSSFRAAG 223

Query: 619  CQAKSPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVSISTTERIGDSDSSVVVERN 798
            CQAKSPI+TLDEL V E+   P F   M          KVS       GD  S      N
Sbjct: 224  CQAKSPIRTLDELSVNEVIESPYFPSLMDREQ----HNKVS-------GDLRSC----PN 268

Query: 799  RENFDATFTECDNGGILCQNPNGDSL--GINGCGFGRKKGHRGYVVVARARSFLYHQVRL 972
                D   T          NP+ D +       GFG+++ HR  VV ARAR+FLYHQVRL
Sbjct: 269  NSETDIPPT---------SNPSIDKVMASSQDVGFGKRRRHRCLVVTARARAFLYHQVRL 319

Query: 973  LVGTLKSVGTGKISCDDVEKILKARTITSAPPMAPS 1080
            LVG LK+VGTG ++  DVE+IL ART+T+A PMAP+
Sbjct: 320  LVGVLKAVGTGNLTIPDVERILNARTVTAASPMAPA 355


>ref|XP_006858556.1| hypothetical protein AMTR_s00071p00170380 [Amborella trichopoda]
            gi|548862665|gb|ERN20023.1| hypothetical protein
            AMTR_s00071p00170380 [Amborella trichopoda]
          Length = 367

 Score =  367 bits (942), Expect = 4e-99
 Identities = 202/375 (53%), Positives = 249/375 (66%), Gaps = 16/375 (4%)
 Frame = +1

Query: 4    QRKRSLEEPNKDDHYLSKLARTQEPPMSG----------------VQRYLVAIEYDGTNF 135
            Q KR+L+ P  +     K++++QE    G                VQRYLVA+EY GT F
Sbjct: 9    QTKRTLDSPAHNSK-APKISKSQEEEDEGEEEAEYCREKMTENPRVQRYLVALEYIGTRF 67

Query: 136  AGSQKQPTTIRTVQGVLEDAFTKFVGQPVSSMVSSRTDTGVHALMNVFHVDLERISKRNP 315
            +GSQKQP   RTV G LE+AF KF+GQPVS   SSRTD GVHAL NV HVD+ERISKR P
Sbjct: 68   SGSQKQPNC-RTVMGALEEAFHKFIGQPVSIAFSSRTDAGVHALSNVCHVDVERISKRKP 126

Query: 316  GEVLPPHEPDVVRKAVNHFLQKAGGDLMIVDVQKVPMDFHARFRAQERTYFYRILSGEDP 495
             E+LPPHEP VV++AVNHFLQK GGD+M++DV+ VP DFHARF AQERTYFYR+LS  +P
Sbjct: 127  NELLPPHEPGVVKRAVNHFLQKDGGDMMVIDVRFVPPDFHARFMAQERTYFYRLLSSPEP 186

Query: 496  LSVFEKDKAWHVTEDLDLPKMQEACRILVGHHDFSSFRAAGCQAKSPIKTLDELFVCEMP 675
            LS FEK++AWHV EDLD+  M  AC +LVGHHDFSSFRAAGCQAKSP+KTLDEL V E+ 
Sbjct: 187  LSTFEKERAWHVPEDLDIHAMGAACGVLVGHHDFSSFRAAGCQAKSPVKTLDELHVSEVL 246

Query: 676  TWPNFSPCMTANASAAVERKVSISTTERIGDSDSSVVVERNRENFDATFTECDNGGILCQ 855
              PNF          A ER            + ++ + E N    DA   E  NG   C+
Sbjct: 247  PSPNF--------PTAFER------------THNNTIEETNASKRDAADEEDLNGSRKCR 286

Query: 856  NPNGDSLGINGCGFGRKKGHRGYVVVARARSFLYHQVRLLVGTLKSVGTGKISCDDVEKI 1035
                         FG+++ H+ YV+ ARARSFLYHQVRLLVG LK+VG+G ++  DV+ I
Sbjct: 287  Q------------FGQRRTHQCYVITARARSFLYHQVRLLVGVLKAVGSGVLTVADVKCI 334

Query: 1036 LKARTITSAPPMAPS 1080
            L+A+ +T+A PMAP+
Sbjct: 335  LEAKDVTAASPMAPA 349


>gb|ABE79574.2| tRNA pseudouridine synthase [Medicago truncatula]
          Length = 361

 Score =  366 bits (939), Expect = 1e-98
 Identities = 199/358 (55%), Positives = 245/358 (68%), Gaps = 5/358 (1%)
 Frame = +1

Query: 22   EEPNKDDHYLSKLARTQEPPMSG-----VQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVL 186
            EE + +++  SK+++ +E          +QRYLVA+EY GT F G QKQ T  RTV GVL
Sbjct: 13   EECSDNNNRPSKISKIEEEMNQHHHHRKIQRYLVAVEYIGTRFFGFQKQLTD-RTVAGVL 71

Query: 187  EDAFTKFVGQPVSSMVSSRTDTGVHALMNVFHVDLERISKRNPGEVLPPHEPDVVRKAVN 366
            EDAF KFVGQPVS + SSRTD GVHAL NV HVD+ERISKR PGEVL PHEP VVR+AVN
Sbjct: 72   EDAFCKFVGQPVSVVCSSRTDAGVHALSNVCHVDIERISKRKPGEVLQPHEPAVVRRAVN 131

Query: 367  HFLQKAGGDLMIVDVQKVPMDFHARFRAQERTYFYRILSGEDPLSVFEKDKAWHVTEDLD 546
            HFLQK  GDL ++DV+ VP DFHAR++AQERTYFYR+LSG + LS FEKD+AWH+ E+L+
Sbjct: 132  HFLQKENGDLAVIDVRCVPSDFHARYKAQERTYFYRLLSGPETLSTFEKDRAWHIPEELN 191

Query: 547  LPKMQEACRILVGHHDFSSFRAAGCQAKSPIKTLDELFVCEMPTWPNFSPCMTANASAAV 726
            LP MQEAC++LVGHHDFSSFRA+GCQAKSPI++LDEL V E+   P F   M        
Sbjct: 192  LPAMQEACKVLVGHHDFSSFRASGCQAKSPIRSLDELSVVEVTRSPYFPSVMDR------ 245

Query: 727  ERKVSISTTERIGDSDSSVVVERNRENFDATFTECDNGGILCQNPNGDSLGINGCGFGRK 906
            E  ++++       S+S  V+        A   E              S      GFG++
Sbjct: 246  ENPINVTDDLHCFHSNSETVIPLGS---SARIDEV-------------SASKEDVGFGKR 289

Query: 907  KGHRGYVVVARARSFLYHQVRLLVGTLKSVGTGKISCDDVEKILKARTITSAPPMAPS 1080
            + HR  VV ARAR+FLYHQVRLLVG LK VGTG I+  DVE+IL A+T+T+  PMAP+
Sbjct: 290  RYHRCLVVTARARAFLYHQVRLLVGVLKDVGTGNITVTDVERILNAKTVTATSPMAPA 347


>ref|XP_006389535.1| hypothetical protein POPTR_0022s00690g [Populus trichocarpa]
            gi|550312358|gb|ERP48449.1| hypothetical protein
            POPTR_0022s00690g [Populus trichocarpa]
          Length = 370

 Score =  365 bits (938), Expect = 1e-98
 Identities = 197/335 (58%), Positives = 236/335 (70%), Gaps = 4/335 (1%)
 Frame = +1

Query: 88   GVQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFTKFVGQPVSSMVSSRTDTGVHAL 267
            G+QRYLVA+EY GT F GSQ+Q    RTV GVL++AF KF+GQPV+  +SSRTD GVHAL
Sbjct: 48   GLQRYLVAVEYIGTRFCGSQQQ-LNHRTVVGVLQEAFHKFIGQPVTICLSSRTDAGVHAL 106

Query: 268  MNVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQKAGGDLMIVDVQKVPMDFHARFR 447
             NV HVD+ERISKR PGEVLPPHEP VVRKAVNHFLQK  GD+M+ DV+ VP  FHARF+
Sbjct: 107  SNVCHVDVERISKRKPGEVLPPHEPAVVRKAVNHFLQKKEGDIMVTDVRSVPAHFHARFK 166

Query: 448  AQERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQEACRILVGHHDFSSFRAAGCQA 627
            AQERTYFYR+L G + LS FEKD+AWHV+E+LDL  MQEAC++LVGHHDFSSFRA+GCQA
Sbjct: 167  AQERTYFYRLLIGPELLSTFEKDRAWHVSEELDLVSMQEACKVLVGHHDFSSFRASGCQA 226

Query: 628  KSPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVSISTTERIGDSDSSVVVERNREN 807
            KSP +TL+EL V E+ + P F                  S TER  +S        N E 
Sbjct: 227  KSPFRTLEELSVLEVVSTPYFP-----------------SITEREQNSS-------NGEG 262

Query: 808  FDATFTECDNGGILCQNPNGDSLGING----CGFGRKKGHRGYVVVARARSFLYHQVRLL 975
              +   +C  G       NG   G +      GFG ++ HR YV+ AR+RSFLYHQVRLL
Sbjct: 263  PHSFHNKCKTGLPTGSISNGFMAGGSNSGTDLGFGIRRRHRCYVITARSRSFLYHQVRLL 322

Query: 976  VGTLKSVGTGKISCDDVEKILKARTITSAPPMAPS 1080
            VG LKSVGTG ++  DVE+IL AR+IT+A PMAP+
Sbjct: 323  VGVLKSVGTGDLTVSDVERILNARSITAASPMAPA 357


>ref|XP_006471140.1| PREDICTED: tRNA pseudouridine synthase-like 1-like isoform X1 [Citrus
            sinensis]
          Length = 383

 Score =  365 bits (937), Expect = 2e-98
 Identities = 197/330 (59%), Positives = 235/330 (71%)
 Frame = +1

Query: 91   VQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFTKFVGQPVSSMVSSRTDTGVHALM 270
            +QRYL+A+EY GT F+GSQKQ    RTV GVLE+AF KF+GQPVS  +SSRTD GVHA  
Sbjct: 57   IQRYLIAVEYIGTRFSGSQKQ-LNCRTVVGVLEEAFHKFIGQPVSISLSSRTDAGVHAAS 115

Query: 271  NVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQKAGGDLMIVDVQKVPMDFHARFRA 450
            NV HVD+ERISKR PGEVLPPH+  VVR+AVNHFLQK+ GD+M+ DV+ VP DFHARFRA
Sbjct: 116  NVCHVDVERISKRKPGEVLPPHDSSVVRRAVNHFLQKSEGDIMVTDVRCVPSDFHARFRA 175

Query: 451  QERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQEACRILVGHHDFSSFRAAGCQAK 630
            QERTYFYRILSG +PLSVFEKD+AWHVTE+LDL  MQEAC++LVG HDFSSFRA+GCQA 
Sbjct: 176  QERTYFYRILSGPEPLSVFEKDRAWHVTEELDLRAMQEACKVLVGCHDFSSFRASGCQAN 235

Query: 631  SPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVSISTTERIGDSDSSVVVERNRENF 810
            SPI+TLDEL V E+ +   F                         + DS V+        
Sbjct: 236  SPIRTLDELHVSEVVSTALFPSI----------------------NQDSPVL-------- 265

Query: 811  DATFTECDNGGILCQNPNGDSLGINGCGFGRKKGHRGYVVVARARSFLYHQVRLLVGTLK 990
                +  DN   L   PNG S       FG +K HR Y V+ARARSFLYHQVRL+VG LK
Sbjct: 266  ----SSIDNSSKLGM-PNGGS-----NVFGIRKKHRSYEVIARARSFLYHQVRLIVGVLK 315

Query: 991  SVGTGKISCDDVEKILKARTITSAPPMAPS 1080
            +VGTG+++  DVE+ILKA+T+T+A PMAP+
Sbjct: 316  AVGTGELTVSDVERILKAKTVTAASPMAPA 345


>ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223534233|gb|EEF35948.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 372

 Score =  365 bits (936), Expect = 2e-98
 Identities = 198/335 (59%), Positives = 235/335 (70%), Gaps = 5/335 (1%)
 Frame = +1

Query: 91   VQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFTKFVGQPVSSMVSSRTDTGVHALM 270
            +QRYL+A+EY GT FAGSQKQ    RTV GVLE+AF KF+GQ VS  +SSRTD GVHAL 
Sbjct: 53   LQRYLIAVEYIGTKFAGSQKQLNG-RTVVGVLEEAFCKFIGQQVSVSLSSRTDAGVHALS 111

Query: 271  NVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQKAGGDLMIVDVQKVPMDFHARFRA 450
            NV HVD+ERISKR PGEVLPPHEP VVR+AVNHFLQK  GD+M+ DV+ VP DFHARF+A
Sbjct: 112  NVCHVDIERISKRKPGEVLPPHEPAVVRRAVNHFLQKNEGDIMVTDVRCVPSDFHARFKA 171

Query: 451  QERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQEACRILVGHHDFSSFRAAGCQAK 630
            QERTYFYR LSG +PLS FEKD+AWHV EDLD+  MQEAC++LVGHHDFSSFRA+GCQAK
Sbjct: 172  QERTYFYRFLSGPEPLSTFEKDRAWHVLEDLDIVAMQEACKVLVGHHDFSSFRASGCQAK 231

Query: 631  SPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVSISTTERIGDSDSSVVVERNRENF 810
            SPI+TL E+ V E+ +   F                  S TER          E+N EN 
Sbjct: 232  SPIRTLAEISVSEVASTLYFP-----------------SITER----------EQNCENG 264

Query: 811  DATF-----TECDNGGILCQNPNGDSLGINGCGFGRKKGHRGYVVVARARSFLYHQVRLL 975
            + +      T+   G     N    S G    GFG ++ HR +VV ARARSFLYHQVRLL
Sbjct: 265  ENSCCKKFKTDLPMGSHSNTNVAESSFGETDLGFGIRRRHRCFVVTARARSFLYHQVRLL 324

Query: 976  VGTLKSVGTGKISCDDVEKILKARTITSAPPMAPS 1080
            VG LKSVG G ++  DVE+IL A+++T+A PMAP+
Sbjct: 325  VGVLKSVGIGDLTTSDVERILSAKSVTAASPMAPA 359


>ref|XP_002331109.1| predicted protein [Populus trichocarpa]
          Length = 326

 Score =  362 bits (930), Expect = 1e-97
 Identities = 196/335 (58%), Positives = 235/335 (70%), Gaps = 4/335 (1%)
 Frame = +1

Query: 88   GVQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFTKFVGQPVSSMVSSRTDTGVHAL 267
            G+QRYLVA+EY GT F GSQ+Q    RTV GVL++AF KF+GQPV+  +SSRTD GVHAL
Sbjct: 4    GLQRYLVAVEYIGTRFCGSQQQ-LNHRTVVGVLQEAFHKFIGQPVTICLSSRTDAGVHAL 62

Query: 268  MNVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQKAGGDLMIVDVQKVPMDFHARFR 447
             NV HVD+ERISKR PGEVLPPHEP VVRKAVNHFLQK  GD+M+ DV+ V   FHARF+
Sbjct: 63   SNVCHVDVERISKRKPGEVLPPHEPAVVRKAVNHFLQKKEGDIMVTDVRSVSAHFHARFK 122

Query: 448  AQERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQEACRILVGHHDFSSFRAAGCQA 627
            AQERTYFYR+L G + LS FEKD+AWHV+E+LDL  MQEAC++LVGHHDFSSFRA+GCQA
Sbjct: 123  AQERTYFYRLLIGPELLSTFEKDRAWHVSEELDLVSMQEACKVLVGHHDFSSFRASGCQA 182

Query: 628  KSPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVSISTTERIGDSDSSVVVERNREN 807
            KSP +TL+EL V E+ + P F                  S TER  +S        N E 
Sbjct: 183  KSPFRTLEELSVLEVVSTPYFP-----------------SITEREQNSS-------NGEG 218

Query: 808  FDATFTECDNGGILCQNPNGDSLGING----CGFGRKKGHRGYVVVARARSFLYHQVRLL 975
              +   +C  G       NG   G +      GFG ++ HR YV+ AR+RSFLYHQVRLL
Sbjct: 219  PHSFHNKCKTGLPTGSISNGFMAGGSNSGTDLGFGIRRRHRCYVITARSRSFLYHQVRLL 278

Query: 976  VGTLKSVGTGKISCDDVEKILKARTITSAPPMAPS 1080
            VG LKSVGTG ++  DVE+IL AR+IT+A PMAP+
Sbjct: 279  VGVLKSVGTGDLTVSDVERILNARSITAASPMAPA 313


>ref|NP_172451.2| pseudouridine synthase family protein [Arabidopsis thaliana]
            gi|332190374|gb|AEE28495.1| pseudouridine synthase family
            protein [Arabidopsis thaliana]
          Length = 372

 Score =  362 bits (928), Expect = 2e-97
 Identities = 192/353 (54%), Positives = 248/353 (70%)
 Frame = +1

Query: 22   EEPNKDDHYLSKLARTQEPPMSGVQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFT 201
            +E +++   L+ L  +  P    VQRYLVAIEY GT F+GSQ+Q    RTV GVL++AF 
Sbjct: 32   DEESEEQQGLADL-ESMNPVNPRVQRYLVAIEYIGTRFSGSQQQAKD-RTVVGVLQEAFH 89

Query: 202  KFVGQPVSSMVSSRTDTGVHALMNVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQK 381
            KF+GQPV    SSRTD GVHAL NV HVD+ERISKR PGEVLPPHEP VV++AVNHFLQ+
Sbjct: 90   KFIGQPVKIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQR 149

Query: 382  AGGDLMIVDVQKVPMDFHARFRAQERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQ 561
              GD+M++DV+ VP ++HAR++AQERTYFYR+LSG DPLS+ EKD+ WHV E+L+L  MQ
Sbjct: 150  KDGDVMVIDVRCVPSNYHARYKAQERTYFYRLLSGSDPLSILEKDRCWHVPEELNLRFMQ 209

Query: 562  EACRILVGHHDFSSFRAAGCQAKSPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVS 741
            EACR+LVG HDFSSFRAAGCQAKSP+++LDEL + E+P+ P F P +T            
Sbjct: 210  EACRVLVGSHDFSSFRAAGCQAKSPMRSLDELNITEVPSTPYF-PSITER---------- 258

Query: 742  ISTTERIGDSDSSVVVERNRENFDATFTECDNGGILCQNPNGDSLGINGCGFGRKKGHRG 921
              T   + + D      + +       T   N G +  +  GDS       FGR++ HR 
Sbjct: 259  --TLSNLNNGDPLACSNQPKSETAGVTT---NVGEVEGSTEGDS-------FGRRRRHRC 306

Query: 922  YVVVARARSFLYHQVRLLVGTLKSVGTGKISCDDVEKILKARTITSAPPMAPS 1080
            YVV AR+R FLYHQVRL+VG LK VGTG+++  DVE+IL+A+T+++A PMAP+
Sbjct: 307  YVVTARSRGFLYHQVRLIVGALKCVGTGELTVSDVERILEAKTVSAAKPMAPA 359


>dbj|BAD44444.1| unnamed protein product [Arabidopsis thaliana]
            gi|51971573|dbj|BAD44451.1| unnamed protein product
            [Arabidopsis thaliana]
          Length = 368

 Score =  362 bits (928), Expect = 2e-97
 Identities = 192/353 (54%), Positives = 248/353 (70%)
 Frame = +1

Query: 22   EEPNKDDHYLSKLARTQEPPMSGVQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFT 201
            +E +++   L+ L  +  P    VQRYLVAIEY GT F+GSQ+Q    RTV GVL++AF 
Sbjct: 28   DEESEEQQGLADL-ESMNPVNPRVQRYLVAIEYIGTRFSGSQQQAKD-RTVVGVLQEAFH 85

Query: 202  KFVGQPVSSMVSSRTDTGVHALMNVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQK 381
            KF+GQPV    SSRTD GVHAL NV HVD+ERISKR PGEVLPPHEP VV++AVNHFLQ+
Sbjct: 86   KFIGQPVKIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQR 145

Query: 382  AGGDLMIVDVQKVPMDFHARFRAQERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQ 561
              GD+M++DV+ VP ++HAR++AQERTYFYR+LSG DPLS+ EKD+ WHV E+L+L  MQ
Sbjct: 146  KDGDVMVIDVRCVPSNYHARYKAQERTYFYRLLSGSDPLSILEKDRCWHVPEELNLRFMQ 205

Query: 562  EACRILVGHHDFSSFRAAGCQAKSPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVS 741
            EACR+LVG HDFSSFRAAGCQAKSP+++LDEL + E+P+ P F P +T            
Sbjct: 206  EACRVLVGSHDFSSFRAAGCQAKSPMRSLDELNITEVPSTPYF-PSITER---------- 254

Query: 742  ISTTERIGDSDSSVVVERNRENFDATFTECDNGGILCQNPNGDSLGINGCGFGRKKGHRG 921
              T   + + D      + +       T   N G +  +  GDS       FGR++ HR 
Sbjct: 255  --TLSNLNNGDPLACSNQPKSETAGVTT---NVGEVEGSTGGDS-------FGRRRRHRC 302

Query: 922  YVVVARARSFLYHQVRLLVGTLKSVGTGKISCDDVEKILKARTITSAPPMAPS 1080
            YVV AR+R FLYHQVRL+VG LK VGTG+++  DVE+IL+A+T+++A PMAP+
Sbjct: 303  YVVTARSRGFLYHQVRLIVGALKCVGTGELTVSDVERILEAKTVSAAKPMAPA 355


>gb|AAT06466.1| At1g09800 [Arabidopsis thaliana]
          Length = 372

 Score =  362 bits (928), Expect = 2e-97
 Identities = 192/353 (54%), Positives = 248/353 (70%)
 Frame = +1

Query: 22   EEPNKDDHYLSKLARTQEPPMSGVQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFT 201
            +E +++   L+ L  +  P    VQRYLVAIEY GT F+GSQ+Q    RTV GVL++AF 
Sbjct: 32   DEESEEQQGLADL-ESMNPVNPRVQRYLVAIEYIGTRFSGSQQQAKD-RTVVGVLQEAFH 89

Query: 202  KFVGQPVSSMVSSRTDTGVHALMNVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQK 381
            KF+GQPV    SSRTD GVHAL NV HVD+ERISKR PGEVLPPHEP VV++AVNHFLQ+
Sbjct: 90   KFIGQPVKIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQR 149

Query: 382  AGGDLMIVDVQKVPMDFHARFRAQERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQ 561
              GD+M++DV+ VP ++HAR++AQERTYFYR+LSG DPLS+ EKD+ WHV E+L+L  MQ
Sbjct: 150  KDGDVMVIDVRCVPSNYHARYKAQERTYFYRLLSGSDPLSILEKDRCWHVPEELNLRFMQ 209

Query: 562  EACRILVGHHDFSSFRAAGCQAKSPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVS 741
            EACR+LVG HDFSSFRAAGCQAKSP+++LDEL + E+P+ P F P +T            
Sbjct: 210  EACRVLVGSHDFSSFRAAGCQAKSPMRSLDELNITEVPSTPYF-PSITER---------- 258

Query: 742  ISTTERIGDSDSSVVVERNRENFDATFTECDNGGILCQNPNGDSLGINGCGFGRKKGHRG 921
              T   + + D      + +       T   N G +  +  GDS       FGR++ HR 
Sbjct: 259  --TLSNLNNGDPLACSNQPKSETAGVTT---NVGEVEGSTGGDS-------FGRRRRHRC 306

Query: 922  YVVVARARSFLYHQVRLLVGTLKSVGTGKISCDDVEKILKARTITSAPPMAPS 1080
            YVV AR+R FLYHQVRL+VG LK VGTG+++  DVE+IL+A+T+++A PMAP+
Sbjct: 307  YVVTARSRGFLYHQVRLIVGALKCVGTGELTVSDVERILEAKTVSAAKPMAPA 359


>gb|ESW20555.1| hypothetical protein PHAVU_006G218900g [Phaseolus vulgaris]
          Length = 373

 Score =  361 bits (927), Expect = 2e-97
 Identities = 197/351 (56%), Positives = 241/351 (68%), Gaps = 1/351 (0%)
 Frame = +1

Query: 31   NKDDHYLSKLARTQEPPMSGVQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFTKFV 210
            ++DD    +   TQ P  +G+QRY +AIEY GT F+GSQKQ  T RTV G LE+AF KFV
Sbjct: 33   HEDDEEEEEKEMTQNP-RNGIQRYFLAIEYIGTRFSGSQKQ-LTCRTVVGALEEAFAKFV 90

Query: 211  GQPVSSMVSSRTDTGVHALMNVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQKAGG 390
            G PVS   SSRTD GVHAL NV HVD++R SKR PGEVLPPHEP VV +AVNHFLQK   
Sbjct: 91   GHPVSVSCSSRTDAGVHALSNVCHVDIQRTSKRKPGEVLPPHEPAVVGRAVNHFLQKHDS 150

Query: 391  DLMIVDVQKVPMDFHARFRAQERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQEAC 570
            DL ++DV+ VP DFHAR++A ERTYFYR+LSG +PLS FEKD+AWHV+E+L+LP MQEAC
Sbjct: 151  DLTVIDVRCVPSDFHARYKALERTYFYRLLSGPEPLSTFEKDRAWHVSEELNLPAMQEAC 210

Query: 571  RILVGHHDFSSFRAAGCQAKSPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVSIST 750
            R+LVG HDFSSFRAAGCQAKSPI+TLDEL V E+    +F   M        E    +S+
Sbjct: 211  RVLVGSHDFSSFRAAGCQAKSPIRTLDELNVSEVIESLHFPSVMDR------EGHDKVSS 264

Query: 751  TERIGDSDSSV-VVERNRENFDATFTECDNGGILCQNPNGDSLGINGCGFGRKKGHRGYV 927
              R   S+S   +   +    D   T  ++                  GFG+++ HR  V
Sbjct: 265  DPRSYPSNSETDIPPSSSPCIDKVTTSSED-----------------VGFGKRRRHRCLV 307

Query: 928  VVARARSFLYHQVRLLVGTLKSVGTGKISCDDVEKILKARTITSAPPMAPS 1080
            V ARARSFLYHQVRLLVG LK+VGTG ++  DVE+IL A+++TSA PMAP+
Sbjct: 308  VTARARSFLYHQVRLLVGVLKAVGTGNLTIPDVERILNAKSVTSASPMAPA 358


>ref|XP_006417534.1| hypothetical protein EUTSA_v10007981mg [Eutrema salsugineum]
            gi|557095305|gb|ESQ35887.1| hypothetical protein
            EUTSA_v10007981mg [Eutrema salsugineum]
          Length = 368

 Score =  361 bits (926), Expect = 3e-97
 Identities = 191/339 (56%), Positives = 240/339 (70%), Gaps = 3/339 (0%)
 Frame = +1

Query: 73   EPPMS---GVQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFTKFVGQPVSSMVSSR 243
            EP +S    VQRYLVAIEY GT F+GSQ+Q T  RTV GVL++AF KF+GQPV    SSR
Sbjct: 49   EPELSMNPRVQRYLVAIEYIGTRFSGSQQQATD-RTVVGVLQEAFHKFIGQPVKIFCSSR 107

Query: 244  TDTGVHALMNVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQKAGGDLMIVDVQKVP 423
            TD GVHAL NV HVD+ERISKR PGEVLPPHEP VV++AVNHFLQ+  GD+M++DV+ VP
Sbjct: 108  TDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRNDGDVMVIDVRCVP 167

Query: 424  MDFHARFRAQERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQEACRILVGHHDFSS 603
             ++HAR++A+ERTYFYR+LSG DPLS+ EKD+AWHV E+LDL  MQEACR+LVG HDFSS
Sbjct: 168  SNYHARYKARERTYFYRLLSGSDPLSILEKDRAWHVPEELDLRSMQEACRVLVGTHDFSS 227

Query: 604  FRAAGCQAKSPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVSISTTERIGDSDSSV 783
            FRAAGCQAKSPI++LDEL V E+P+ P F P +T    + +     ++ + +     + V
Sbjct: 228  FRAAGCQAKSPIRSLDELNVTEVPSTPYF-PSITERTPSYLNNGDPLACSSQAKTETAGV 286

Query: 784  VVERNRENFDATFTECDNGGILCQNPNGDSLGINGCGFGRKKGHRGYVVVARARSFLYHQ 963
              +                        GD+       FG ++ HR YVV AR R+FLYHQ
Sbjct: 287  STD-----------------------GGDT-------FGVRRRHRCYVVTARGRAFLYHQ 316

Query: 964  VRLLVGTLKSVGTGKISCDDVEKILKARTITSAPPMAPS 1080
            VRLLV  LK VGTG+++  DVE+ILKA+T+T+A PMAP+
Sbjct: 317  VRLLVAALKCVGTGELTVSDVERILKAKTVTAAKPMAPA 355


>ref|XP_004161929.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 352

 Score =  361 bits (926), Expect = 3e-97
 Identities = 192/334 (57%), Positives = 234/334 (70%)
 Frame = +1

Query: 79   PMSGVQRYLVAIEYDGTNFAGSQKQPTTIRTVQGVLEDAFTKFVGQPVSSMVSSRTDTGV 258
            P  G+QRYLVA+EY GT F GSQ+QP   RTV G LE+AF KF+GQPVS   SSRTD GV
Sbjct: 43   PKPGIQRYLVAVEYIGTRFYGSQQQPNC-RTVVGALEEAFQKFIGQPVSVFCSSRTDAGV 101

Query: 259  HALMNVFHVDLERISKRNPGEVLPPHEPDVVRKAVNHFLQKAGGDLMIVDVQKVPMDFHA 438
            HAL NV HVD+ERISKR PGEVLPPHEP VV KAVNHFLQK  GD+ +VDV+ VP DFHA
Sbjct: 102  HALSNVCHVDVERISKRKPGEVLPPHEPGVVHKAVNHFLQKHEGDVTVVDVRSVPNDFHA 161

Query: 439  RFRAQERTYFYRILSGEDPLSVFEKDKAWHVTEDLDLPKMQEACRILVGHHDFSSFRAAG 618
            R++AQERTYFYR++SG + LS FEKD+AWHV E L++  MQEAC++LVGHHDFSSFRAAG
Sbjct: 162  RYKAQERTYFYRLVSGPEALSSFEKDRAWHVPETLNIGAMQEACKVLVGHHDFSSFRAAG 221

Query: 619  CQAKSPIKTLDELFVCEMPTWPNFSPCMTANASAAVERKVSISTTERIGDSDSSVVVERN 798
            CQA SPI+TLDEL VCE+ + P F   M        ERK      +R G  +S + V   
Sbjct: 222  CQANSPIRTLDELNVCEVASTPYFPTSM--------ERK------QRQGKEESEIEV--- 264

Query: 799  RENFDATFTECDNGGILCQNPNGDSLGINGCGFGRKKGHRGYVVVARARSFLYHQVRLLV 978
                                P  ++  +   GFG ++ HR +VV ARARSFLYHQVRL+V
Sbjct: 265  --------------------PCSETCEV---GFGIRRRHRCFVVTARARSFLYHQVRLMV 301

Query: 979  GTLKSVGTGKISCDDVEKILKARTITSAPPMAPS 1080
            G LK+VG+G ++  DV +IL+A+ ++SA PMAP+
Sbjct: 302  GVLKAVGSGDLTVGDVGRILEAKNVSSARPMAPA 335